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From 01/30/2019 to 02/28/2019

02/28/2019

09:54 PM feature request #8157 (New): Registration list view: sort registrations by the same order as in t...
newer registrations should come first.
Oder by created when! (agreed)
Andreas Kohlbecker
09:50 PM feature request #8156: Registration items show type status in bold letters
should be easy to implement, thus i am setting the priority to high Andreas Kohlbecker
09:50 PM feature request #8156 (New): Registration items show type status in bold letters
The type status in registration items is not easy to see. Making the status bold would improve the readability. Andreas Kohlbecker
09:47 PM feature request #8155 (Feedback): SpecimenTypeDesignationEditor: allow choosing the typified name...
Andreas Kohlbecker
09:47 PM feature request #8155: SpecimenTypeDesignationEditor: allow choosing the typified name from the h...
For how urgent do you consider this feature, Henning? I guess this situation will occur quite frequently? Andreas Kohlbecker
09:42 PM feature request #8155 (Feedback): SpecimenTypeDesignationEditor: allow choosing the typified name...
In case of lecto-, epit- and neo-types the SpecimenTypeDesignationEditor should selecting the typified name from the ... Andreas Kohlbecker
05:30 PM bug #7514: Change direct and inverse symbol for pro parte synonym and misapplied name relationshi...
the test page http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c6716cee-2039-4ba8-a239-... Andreas Kohlbecker
05:24 PM Revision 2ae1c797 (cdm-dataportal): ref #7514 adapting tests to conform to new misapplied name sy...
Andreas Kohlbecker
04:56 PM Revision f8fea9b6 (cdmlib): Fix potential NPE
Patrick Plitzner
04:55 PM Revision 77aef047 (taxeditor): ref #8146 Restrict character matrix to characters
Patrick Plitzner
04:47 PM Revision 983949ab (cdmlib): ref #8153 Fix feature tree type check for distinct features
Patrick Plitzner
04:36 PM Revision d343a6cf (taxeditor): ref #8146 Adapt feature tree editor and move operation to model ch...
Patrick Plitzner
04:35 PM Revision 62b71512 (taxeditor): ref #8146 Adapt character matrix to termType model change
Patrick Plitzner
04:12 PM bug #8154 (New): NameController.doGetTaggedName fails due to [UPDATE] not permitted for 'anonymo...
http://160.45.63.173:8081/phycobank/name/a2b01d35-fdcf-43fb-8376-f03f195c6e06/taggedName.json
fails every ~4 times...
Andreas Kohlbecker
04:09 PM Revision cb9ebcd2 (cdmlib): ref #8153 Further adapt cdmlib to model changes
- Adjust feature node service to model changes Patrick Plitzner
03:05 PM bug #8152 (Duplicate): ReferencePopupEditor: inReference field allows to select references with t...
Henning: References with type 'Generic' must not be in the list, filter only by matching type
So this is a duplica...
Andreas Kohlbecker
01:05 PM bug #8152 (Duplicate): ReferencePopupEditor: inReference field allows to select references with t...
Heba reported an error which was due the Journal "Rickia" having the Referencetype 'Generic'
The reference could b...
Andreas Kohlbecker
01:35 PM Revision cc0fa0be (cdmlib): ref #8153 Adapt cdmlib to model changes
- Add constructor for creating a FeatureNode for a given termType
- Adjust feature node service to model changes
Patrick Plitzner
01:30 PM feature request #8153 (Closed): Adapt cdmlib to FeatureNode/FeatureTree model changes
* Since the introduction of term trees with the last model change (5.6.0) `FeatureNode.getFeature()` is deprecated an... Patrick Plitzner
01:24 PM Revision 8619ed30 (taxeditor): minor
Katja Luther
01:22 PM Revision 3e5f990d (cdmlib): ref #8017 cleanup
Andreas Müller
12:57 PM Revision 5400ca5d (taxeditor): revert changes in NaturalLanguageDetail elements
Katja Luther
12:54 PM Revision aac942e0 (cdmlib): Revert "ref #8124: adapt NaturalLanguageGenerator to usage in nameFacts"
This reverts commit c495b39b090fa3af00d870a8ba8171d7300e66a4. Katja Luther
12:45 PM Revision df6e6291 (taxeditor): minor
Patrick Plitzner
12:45 PM Revision b9492486 (taxeditor): ref #8146 Add termType to feature tree composite and selection dialog
Patrick Plitzner
12:45 PM Revision 47ce5432 (taxeditor): ref #8146 Fix potential class cast exceptions
- replace deprecated FeatureNode.getFeature() with getTerm() Patrick Plitzner
12:45 PM Revision d4cccf9c (taxeditor): ref #8146 Add termType to vocabulary selection dialog
Patrick Plitzner
12:45 PM Revision 1c59050a (taxeditor): ref #8146 Restrict tree selection in descriptive data set editor
Patrick Plitzner
12:45 PM Revision 4832aaf7 (taxeditor): ref #8146 Add character voc selection in character editor
Patrick Plitzner
12:43 PM Revision 2a8f0c28 (cdmlib): ref #8124: add new TaxonNameDescriptionDefaultCacheStrategy
Katja Luther
12:16 PM feature request #4611 (New): I18n for the Taxeditor
sorry, was a mistake Andreas Müller
12:12 PM feature request #4611 (Resolved): I18n for the Taxeditor
Andreas Müller
12:14 PM feature request #8124: Activate Name Facts in Taxeditor
Katja Luther wrote:
> when activating the name facts for the name displayed in the details view, the details view is...
Katja Luther
11:24 AM feature request #8124: Activate Name Facts in Taxeditor
when activating the name facts for the name displayed in the details view, the details view is the selectionProviding... Katja Luther
12:11 PM Revision b6f51ff3 (taxeditor): ref #8124: activate name facts for name in taxon details view
Katja Luther
11:57 AM bug #7107: "Omit level" in distribution hierarchy should not supress distributions source referen...
OK Andreas Kohlbecker
11:52 AM bug #7107 (New): "Omit level" in distribution hierarchy should not supress distributions source r...
Ich glaube nicht, dass das für E+M relevant ist, da wir in E+M ja das E+M Voc verwenden, welches keine Omit levels ha... Andreas Müller
11:37 AM bug #7107 (Feedback): "Omit level" in distribution hierarchy should not supress distributions sou...
Hallo Andreas, ich denke das ist auch für Euro+Med releveant, oder?
Wenn ja, sollten wir das Tag hinzufügen und di...
Andreas Kohlbecker
11:57 AM feature request #4610: [DISCUSS] I18n for the EDIT platform
Please do not move unreviewed tickets to Reviewed milestone Andreas Müller
11:50 AM Revision c495b39b (cdmlib): ref #8124: adapt NaturalLanguageGenerator to usage in nameFacts
Katja Luther
11:05 AM bug #8151 (Resolved): after creating a new synonym and pasting a name string the default string i...
the call of placeCursor() caused that the cursor was at the end of the "Klicken, um ..." string. Removing this method... Katja Luther
10:58 AM bug #8151 (Closed): after creating a new synonym and pasting a name string the default string is ...
mail von S. v. M.:
Beim Reinkopieren eines neuen Synonyms blieb der Text “Klicken, um Namen hinzuzufügen” stehen.
...
Katja Luther
10:53 AM Revision ddc5d7b6 (taxeditor): do not call placecursor after creating new synonym
Katja Luther
10:49 AM Revision 52d76872 (taxeditor): ref #8124: adapt editor to be able to edit NameFacts
Katja Luther
09:18 AM Revision a0275f90 (cdmlib): ref #7514 adapt MAN symbol to portal tests (cont.)
Andreas Müller
09:13 AM Revision feef1ad0 (cdmlib): ref #7514 adapt MAN symbol to portal tests
Andreas Müller
08:07 AM feature request #8146: Adapt taxeditor UI to structure and property term type
Add character to term menu with commit:2c98dda6165033a58c7df8c06b21518d380307b3 Patrick Plitzner
07:39 AM Revision 1b28edc1 (taxeditor): ref #8146 Restrict term tree selection by termType
Patrick Plitzner

02/27/2019

05:03 PM Revision 716825dd (cdm-vaadin): minor
Andreas Müller
05:02 PM Revision 68a8023a (cdm-vaadin): ref #3560
Andreas Müller
04:31 PM Revision 2c98dda6 (cdmlib): ref #6618 , ref #8012, ref #3853 add TermType.Character
Andreas Müller
03:52 PM bug #8132: phycobank cdm-server instance problems with db connections
I set `testConnectionsOnCheckIn=true` temporarily via jmx in order to test if this helps avoiding this connectivity p... Andreas Kohlbecker
03:30 PM feature request #8124: Activate Name Facts in Taxeditor
for the name bulk editor the name facts are activated now.
still missing is the activation if name is selected in ...
Katja Luther
03:24 PM Revision 16aed412 (cdmlib): cleanup and MultilanguageText.add(Language, String) added
Andreas Müller
03:11 PM Revision defd0d5c (taxeditor): ref #8146 Restrict term tree selection by termType
Patrick Plitzner
03:10 PM Revision b6d3c69f (cdmlib): ref #8146 Add service method for UuidAndTitleCache by termType for trees
Patrick Plitzner
02:44 PM Revision df0abd11 (cdmlib): ref #8146 Refactor service method
Patrick Plitzner
02:24 PM feature request #8150 (Closed): Allow editing the representation label of characters in details view
Patrick Plitzner
02:21 PM Revision f34f795b (cdmlib): ref #8146 Adapt getEmptyDefinedTermBase() for new term types
Patrick Plitzner
01:56 PM feature request #8136 (In Progress): Implement sources for type designations in TaxEditor
Katja Luther
01:53 PM Revision 89084783 (taxeditor): ref #8136: add reference part for lectotype
Katja Luther
12:10 PM Revision 87934a59 (taxeditor): ref #8136: move sources to supplemental data
Katja Luther
11:08 AM Revision 741b8c90 (taxeditor): fix test
Katja Luther
10:34 AM bug #8149 (Closed): ReferenceEditor: filter inReferences ONLY by applicable reference type suppes...
In reference type = article
Drop down of Journals should only search for entries = journal (not for all references)
...
Wolf-Henning Kusber
10:19 AM bug #8148 (In Progress): Login Dialog cuts off information
Katja Luther
10:18 AM bug #8148 (Resolved): Login Dialog cuts off information
Applied in changeset commit:taxeditor|a08af9f9d2b8840b48fc63b647aca9ee0a34b68c. Katja Luther
09:38 AM bug #8148 (Closed): Login Dialog cuts off information
In the case of an exception and for the advanced section information is not correctly displayed.
![](picture896-1....
Patrick Plitzner
10:18 AM Revision a08af9f9 (taxeditor): fix #8148: fix login dialog problems
Katja Luther
09:34 AM feature request #8147 (Resolved): Add "plural" to representation detail element
Fixed with commit:taxeditor|754fbf873ca0b63addc6842c089298fff76eb30d Patrick Plitzner
08:44 AM feature request #8147 (Closed): Add "plural" to representation detail element
Patrick Plitzner
09:21 AM Revision 24376297 (taxeditor): ref #8142 code refactoring
Patrick Plitzner
09:18 AM Revision 754fbf87 (taxeditor): ref #8142 Add representation plural to details view
Patrick Plitzner
09:04 AM Revision 46b6729e (cdmlib): ref #8142 Add getter/setter for plural
Patrick Plitzner
08:58 AM Revision 18d5bf2c (taxeditor): ref #8147 minor refactoring
Patrick Plitzner
08:55 AM Revision 8f743056 (taxeditor): ref #8147 code cleanup
Patrick Plitzner
08:49 AM Revision 2a743618 (taxeditor): Revert "temporary ignore test for nightly build"
This reverts commit 7fd8d99d2169cbc2614a4de65b090e77d47e939a. Patrick Plitzner
08:48 AM Revision 7fd8d99d (taxeditor): temporary ignore test for nightly build
Patrick Plitzner
08:37 AM feature request #8146 (Closed): Adapt taxeditor UI to structure and property term type
1. ~~Add term editor menu for each~~
1. ~~Restrict tree selection in CharacterEditor~~
1. ~~Restrict context menu,...
Patrick Plitzner

02/26/2019

07:46 PM Revision 5bc58b89 (cdmlib): removing unused private fiels in H2DatabaseType
Andreas Kohlbecker
04:59 PM Revision 84bbc7d1 (cdmlib): cleanup
Andreas Müller
04:57 PM Revision 1634067b (cdmlib): ref #7514 update misapplied name symbols & add tests
Andreas Müller
04:55 PM feature request #3616: Show DescriptionElementBase.timeperiod in Dataportals
Improvements for formatting copied to #8145 Andreas Müller
02:37 PM feature request #3616: Show DescriptionElementBase.timeperiod in Dataportals
Andreas Müller wrote:
> Generally it looks fine.
>
> Only the formatting maybe needs discussion. It differs from...
Andreas Kohlbecker
02:26 PM feature request #3616 (Feedback): Show DescriptionElementBase.timeperiod in Dataportals
Generally it looks fine.
Only the formatting maybe needs discussion. It differs from the default formatting of ti...
Andreas Müller
01:00 PM feature request #3616 (Resolved): Show DescriptionElementBase.timeperiod in Dataportals
Implemented
please review, for the page used by the integration test, please see : http://int.e-taxonomy.eu/datapo...
Andreas Kohlbecker
03:33 PM Revision f37da5d1 (cdm-dataportal): ref #8011 Adapt to cdmlib model change for Pair in DTOs
Patrick Plitzner
03:31 PM Revision c30d94b9 (cdm-vaadin): removing unused xsd files
Andreas Kohlbecker
03:09 PM feature request #8145 (New): Implement TimePeriod DTO with localized formatting
for details see #3616#note-10 ff.
Once implemented we also need to adapt dataportal code to use the new timeperiod...
Andreas Müller
02:57 PM Revision 5760437b (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
02:57 PM Revision 6f5a0cd4 (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner
01:58 PM Revision fd2fae75 (taxeditor): fix test in ProgressMonitorServiceTest, extraUser needs to be in g...
Katja Luther
01:58 PM Revision d7aa17fe (taxeditor): fix test in ProgressMonitorServiceTest, extraUser needs to be in g...
Katja Luther
01:42 PM task #7356: setup selenium test suite for cdm-vaadin
Adding master thesis on Vaadin TestBench Andreas Kohlbecker
01:25 PM Revision 1938c553 (cdmlib): updated model cache
Katja Luther
12:12 PM feature request #8144: Check if modifiers and modifyingText is handled correctly for description ...
since modifiers and modifyingText can not be added to the database easily I need to wait until the issue #3836 is com... Andreas Kohlbecker
12:09 PM Revision 940bbcf2 (cdm-dataportal): ref #3616 implementing tests for DescriptionElementBase.timep...
Andreas Kohlbecker
11:54 AM Revision 90425089 (cdm-dataportal): ref #3616 implementing display of DescriptionElementBase.time...
Andreas Kohlbecker
11:53 AM Revision d0e8e73c (cdm-dataportal): ref #3616 fixing multibyte character problem related to time ...
Andreas Kohlbecker
11:33 AM Revision 341ee745 (taxeditor): adadpt editor to changes in TypeDesignationBase
Katja Luther
11:10 AM task #8118: Update MySQL drivers
Andreas Müller wrote:
> Starting with MySQL JDBC Driver 5.1.33 serverTimezone needs to be explicitly defined in conn...
Andreas Kohlbecker

02/25/2019

12:32 AM Revision 556e3ea7 (cdmlib): minor
Andreas Müller
12:22 AM Revision 038695b2 (cdmlib): fix some compilation issues with generics
Andreas Müller
12:13 AM Revision a2dba78c (cdmlib): cleanup
Andreas Müller
12:11 AM Revision 2d308550 (cdmlib): cleanup
Andreas Müller
11:14 PM Revision 1715c505 (taxeditor): try fixing compile error
Andreas Müller
11:09 PM Revision c3025a3c (taxeditor): update H2 database after model update
Andreas Müller
10:59 PM Revision 564e560a (taxeditor): try fixing compile error
Andreas Müller
10:54 PM Revision 1c073da5 (cdmlib): doc
Andreas Müller
10:08 PM feature request #3746: Implement time period scope for description elements in TaxEditor
Andreas Kohlbecker wrote:
> The output in the taxeditor can very ugly depending on the partial fields being used:
>...
Andreas Müller
05:28 PM feature request #3746: Implement time period scope for description elements in TaxEditor
The output in the taxeditor can very ugly depending on the partial fields being used:
* Timescope: start month: ...
Andreas Kohlbecker
10:01 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
As we have decided to check for old unimplemented model issues in this version I add it to current milestone. But we ... Andreas Müller
09:13 PM Revision d8b0cbe6 (cdmlib): cleanup
Andreas Müller
09:12 PM Revision 45fd6fd3 (cdmlib): ref #8118 update mysql driver path in code and tests
Andreas Müller
08:54 PM bug #8140 (Resolved): Update list of type designation status which allow an explicit source
Applied in changeset commit:cdmlib|2a0a678b59b88779f6db98619be4d4510ea26f93. Andreas Müller
02:31 PM bug #8140 (Resolved): Update list of type designation status which allow an explicit source
This list is currently returned by transient method TypeDesignationStatusBase.isLectotpye().
Currently it contains...
Andreas Müller
08:54 PM bug #7772: Rename TermBase_inverseRepresentation to DefinedTermBase_InverseRepresentation
Applied in changeset commit:cdmlib|3b49207de7d71fa2af4fcd8a6e7d913dc654d733. Andreas Müller
08:54 PM bug #7859: Increase size of CdmPreference.value
Applied in changeset commit:cdmlib|da556b1537505b615fe45afc8ea7f0d06c5d256b. Andreas Müller
08:49 PM Revision 757c09fe (cdmlib): rename cdm 5.5 update script package
Andreas Müller
08:49 PM Revision 9d893279 (cdmlib): update remote-web-app test DB to 5.0
Andreas Müller
08:49 PM Revision 9b7205bb (cdmlib): ref #8128 first implementation to support EnumSet hibernate user type...
Andreas Müller
08:49 PM Revision 3987e8b8 (cdmlib): ref #8017 add isLectotype to helper class
Andreas Müller
08:49 PM Revision cd63748a (cdmlib): ref #8120 add structure- and property modifier
Andreas Müller
08:49 PM Revision fe4b9d2e (cdmlib): cleanup
Andreas Müller
08:49 PM Revision a26edfb3 (cdmlib): ref #8142 update script for Representation.plural and ref #8017 TypeD...
Andreas Müller
08:49 PM Revision 62d21be1 (cdmlib): ref #8142 add plural to representations
Andreas Müller
08:49 PM Revision eabf0992 (cdmlib): ref #8019 add orthography and etymology as name features
Andreas Müller
08:49 PM Revision 2a0a678b (cdmlib): fix #8140 update "lectotype" type designation status
Andreas Müller
08:49 PM Revision ce490fbf (cdmlib): fix #8139 add test for valid lectotype source
Andreas Müller
08:49 PM Revision ee1b78e8 (cdmlib): ref #7470 some javadoc
Andreas Müller
08:49 PM Revision cbb5cfdf (cdmlib): cleanup
Andreas Müller
08:49 PM Revision b09f8d3c (cdmlib): ref #8120 Add structuralModifier and propertyModifier to Character
Andreas Müller
08:49 PM Revision bb0ac5d5 (cdmlib): add comment to x.inverseRepresentations
Andreas Müller
08:49 PM Revision d8b202c2 (cdmlib): minor
Andreas Müller
08:49 PM Revision 26dbefd5 (cdmlib): ref #8006, ref #7514 , ref #7857 fix TermRepresentationUpdater sql
Andreas Müller
08:49 PM Revision df9e3e2b (cdmlib): ref #7859 fix update script for CdmPreference.value => CLOB
Andreas Müller
08:49 PM Revision 8641421a (cdmlib): ref #7414 handle optional column remove
Andreas Müller
08:49 PM Revision be4d3325 (cdmlib): cleanup
Andreas Müller
08:49 PM Revision 3b49207d (cdmlib): fix #7772 Rename TermBase_inverseRepresentation to DefinedTermBase_In...
Andreas Müller
08:49 PM Revision 7a74af02 (cdmlib): cleanup
Andreas Müller
08:49 PM Revision 0c1509cb (cdmlib): fix #8079 remove cascading from User and Group
Andreas Müller
08:49 PM Revision 79ff2176 (cdmlib): ref #7470 add verbatim type designation / TextTypeDesignation
Andreas Müller
08:49 PM Revision 625c14de (cdmlib): cleanup
Andreas Müller
08:49 PM Revision 562e0ea4 (cdmlib): ref #8019 add Typification Notes as name feature
Andreas Müller
08:49 PM Revision eac82784 (cdmlib): ref #8017 add sources to TypeDesignationBase (cont.)
Andreas Müller
08:49 PM Revision d62d6bb3 (cdmlib): cleanup
Andreas Müller
08:49 PM Revision b5c5e6fc (cdmlib): ref #8017 add sources to TypeDesignationBase
Andreas Müller
08:49 PM Revision d825b848 (cdmlib): cleanup
Andreas Müller
08:49 PM Revision 9414cfe9 (cdmlib): fix #8012 add TermTypes structure and property
Andreas Müller
08:49 PM Revision ffe5e099 (cdmlib): ref #6794 add termType to FeatureTree and FeatureNode
Andreas Müller
08:49 PM Revision 15e58dad (cdmlib): ref #6794 remove setRoot from FeatureTree
Andreas Müller
08:49 PM Revision ba862b53 (cdmlib): cleanup
Andreas Müller
08:49 PM Revision 06d21702 (cdmlib): fix #7372 make allowDuplicates configurable in FeatureTree
Andreas Müller
08:49 PM Revision 08a38652 (cdmlib): ref #7859 removed test for CdmPreference.value size
Andreas Müller
08:49 PM Revision b904d2da (cdmlib): ref #8004 add sortIndex to JAXB annotation
Andreas Müller
08:49 PM Revision a2228e59 (cdmlib): ref #8006 update labels for MAN, ppSynonyms, inval. desig. & tax. inc...
Andreas Müller
08:49 PM Revision 2971012a (cdmlib): fix #7514 update symbols for MAN and ppSynonyms
Andreas Müller
08:49 PM Revision 3d88a9ce (cdmlib): fix #7683 fix ExternalLink_AUD.uuid allows null and fix TableCreator ...
Andreas Müller
08:49 PM Revision 65df4525 (cdmlib): fix #7857 update name relationship type respresentations and symmetrie
Andreas Müller
08:49 PM Revision da556b15 (cdmlib): fix #7859
Andreas Müller
08:49 PM Revision a3cae466 (cdmlib): cleanup
Andreas Müller
08:49 PM Revision 9c9fe9df (cdmlib): fix #7682 set Point.precision to null where 0
Andreas Müller
08:49 PM Revision f15eb5ec (cdmlib): fix 8004 add sortindex to DescriptionElementBase
Andreas Müller
08:49 PM Revision 2fc20029 (cdmlib): add framework for schema update to 5.5
Andreas Müller
08:46 PM Revision e443ff93 (cdmlib): ref #8118 update mysql driver package string
Andreas Müller
08:28 PM task #8118 (Feedback): Update MySQL drivers
Starting with MySQL JDBC Driver 5.1.33 serverTimezone needs to be explicitly defined in connection string or one may ... Andreas Müller
06:22 PM bug #8143 (Resolved): It is possible to open multiple instances of the login dialog
Applied in changeset commit:taxeditor|e25ce35073e04836a1b382da50faf21ab605ae16. Patrick Plitzner
05:45 PM bug #8143 (Closed): It is possible to open multiple instances of the login dialog
With every click on General -> Login another login dialog is opened.
This could be potentially dangerous because t...
Patrick Plitzner
06:22 PM Revision e25ce350 (taxeditor): fix #8143 Make login dialog modal
Patrick Plitzner
06:13 PM feature request #3747 (Closed): Check if time period is handled correctly for description element...
check for and modifiers and modifyingText copied to new ticket, closing this issue Andreas Kohlbecker
06:08 PM feature request #3747: Check if time period is handled correctly for description elements in data...
since modifiers and modifyingText can not be added to the data easily I need to wait until the issue #3836 is complet... Andreas Kohlbecker
06:03 PM feature request #3747 (In Progress): Check if time period is handled correctly for description el...
The scope of this ticket includes modifiers and modifyingText ... reopening issue Andreas Kohlbecker
06:00 PM feature request #3747 (Closed): Check if time period is handled correctly for description element...
the output of timeperiod for DescriptionElements is missing so far in the Dataportal. So ticket #3616 becomes relevan... Andreas Kohlbecker
06:10 PM feature request #8144 (New): Check if modifiers and modifyingText is handled correctly for descri...
not relevant for TextData as we expect that TextData will handle modifiers with its text (see #3836)
Andreas Kohlbecker
06:04 PM feature request #3616 (In Progress): Show DescriptionElementBase.timeperiod in Dataportals
Andreas Kohlbecker
05:45 PM feature request #8142 (Resolved): Representations have optional "plural" as additional field
Andreas Müller
05:32 PM feature request #8142 (Closed): Representations have optional "plural" as additional field
additional to label (required), description (optional, but recommended), abbrevLabel(optional)
https://wiki.bgbm.o...
Andreas Müller
04:00 PM bug #8105 (In Progress): better hotfix branch stragey in git flow to avoid commits in master whic...
it turned out that it can happen that cherries need to be modified when picking them from hotfix to develop. This hap... Andreas Kohlbecker
03:48 PM bug #8132: phycobank cdm-server instance problems with db connections
Andreas Kohlbecker wrote:
> I added `autoReconnect=true` to the connection string of the phycobank datasource.
us...
Andreas Kohlbecker
03:21 PM bug #8132: phycobank cdm-server instance problems with db connections
I added `autoReconnect=true` to the connection string of the phycobank datasource. Andreas Kohlbecker
01:06 PM bug #8132: phycobank cdm-server instance problems with db connections
these connectivity problems should be prevented by c3p0 since the `idleConnectionTestPeriod` is set to `600` (10 minu... Andreas Kohlbecker
02:48 PM feature request #8017 (Resolved): TypeDesignations need sources additional to lectotypifcation so...
We may also want to rename the existing "citation" attribute. This will be doen within #6581 Andreas Müller
02:37 PM bug #8141 (New): explicitSource as additional attribute for TypeDesignationStatus
Some type designation status do allow an explicit source (see #8139). Currently the list of status are handled hardco... Andreas Müller
02:15 PM feature request #8139 (Resolved): [Rule] Validate lectotype sources
Andreas Müller
02:10 PM feature request #8139 (Resolved): [Rule] Validate lectotype sources
Lectotypes and some other type status allow an additional source which mentions in which source the lectotypification... Andreas Müller
02:04 PM feature request #6665 (New): Add "Add specimen duplicate" context menu item to specimen editor
Ok, maybe I closed this too fast. #6413 serves more as a master ticket and this is one step in solving it. Patrick Plitzner
02:01 PM feature request #6665 (Duplicate): Add "Add specimen duplicate" context menu item to specimen editor
Closed as duplicate because the issue description is fully copied to #6413
Also the discussion is done there
Patrick Plitzner
01:36 PM Revision a875a434 (taxeditor): Merge branch 'hotfix/5.5.1'
jenkins
01:33 PM Revision 5b5cdeb7 (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
01:32 PM Revision 057a9c0f (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner

02/24/2019

01:33 PM feature request #7653 (Resolved): [DISCUSS] Delete NameFacts => Result: no
The public flag requirement from #7653#note-5 was moved to a new ticket #8138. I think we can close this ticket now ... Andreas Müller
12:47 PM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
Unification of extensions and facts moved to new ticket #8133 Andreas Müller
01:30 PM feature request #8138 (New): [DISCUSS] Publish flag for facts and type designations
In #7653#note-5 there was the wish for an individual publish flag on type desginations (especially for text based typ... Andreas Müller
01:11 PM feature request #8137 (New): Implement sources for type designations in data portal
For details see #8017.
Be aware that there are 2 different types of sources "lectotype" sources and general source...
Andreas Müller
01:04 PM feature request #8136 (Closed): Implement sources for type designations in TaxEditor
For details see #8017.
Be aware that there are 2 different types of sources "lectotype" sources and general source...
Andreas Müller
12:58 PM feature request #8135 (Closed): Implement verbatim type information in TaxEditor
for details see #7470 and #7653
1. Implement a new detail element for verbatim type designations
2. Implement but...
Andreas Müller
12:53 PM feature request #8134 (In Progress): Implement verbatim type information in dataportal
For details see also #7653#note-5.
Implementation of verbatim type information in cdm in #7470
Andreas Müller
12:41 PM feature request #8019: Add "Typification Notes", "Ortography" and "Etymology" to NameFeature voca...
Also "Ortography" and "Etymology" added. Andreas Müller
12:28 PM feature request #8133 (New): [DISCUSS] Combine Facts and Extensions
for a first discussion see #7653
Facts (DescriptionsElements) and Extensions are both meant for a generic extensio...
Andreas Müller

02/23/2019

01:01 AM bug #8024 (Duplicate): IndexOutOfBoundsException caused by RegistrationWorkingSet.getRegistration...
seems to be duplicate for #7895 Andreas Müller

02/22/2019

12:46 AM bug #7896: NPE, NullPointerException in RelationshipTermBase
There is not much information what data to use for reproducing error. However, I think dbb48641 should fix the proble... Andreas Müller
12:42 AM bug #7896 (Resolved): NPE, NullPointerException in RelationshipTermBase
Applied in changeset commit:cdmlib|dbb486417a2345628d068d0470c845b1cb3dee3a. Andreas Müller
12:42 AM Revision dbb48641 (cdmlib): fix #7896 fix NPE in RelationshipTermBase.getInverseRepresentation
Andreas Müller
12:31 AM Revision 2216f589 (cdmlib): Cleanup
Andreas Müller
12:15 AM feature request #6316: display source references of media objects in media page
To me it looks like this is already implemented. I add to current milestone just to check. Either close+remove milest... Andreas Müller
12:08 AM feature request #5232: use TaxonBase.getTaggedTitle to get the sec reference in theme_cdm_taxonRe...
Shouldn't this be closed? See #note-26 Andreas Müller
09:28 PM Revision 7d50358d (taxeditor): ref #8088: fix publish flag in edit wizard
Katja Luther
09:28 PM Revision 4a5b4e97 (taxeditor): ref #8088: fix publish flag in edit wizard
Katja Luther
06:38 PM bug #8132 (New): phycobank cdm-server instance problems with db connections

the phycobank cdm-server instance which is running in a docker container got problems with the db connections
P...
Andreas Kohlbecker
06:28 PM bug #8119 (Rejected): Link a PhycoBank Id in a Proof to Portal
this is only a side effect of as problem with the server which fails to respond sometimes Andreas Kohlbecker
05:54 PM bug #8119: Link a PhycoBank Id in a Proof to Portal
the requires status message seems to be visible only for logged in users:
![](picture198-1.png)
Andreas Kohlbecker
06:18 PM feature request #8093 (Closed): harmonize registrationId links and make tesing easier
Andreas Kohlbecker
06:17 PM feature request #8093 (Resolved): harmonize registrationId links and make tesing easier
Applied in changeset commit:cdm-dataportal|977bba78560ff1387b601420f9c55409ac19fd92. Andreas Kohlbecker
06:17 PM Revision 977bba78 (cdm-dataportal): fix #8093 registration identifier links configurable
Andreas Kohlbecker
06:09 PM bug #6380: typedesignations missing in homotypic group
Is this still a relevant issue once #7696 is fixed. As the later is on 5.6 I also moved **this** back. If we decide t... Andreas Müller
06:02 PM feature request #7696: use compact type representations in the synonymy as provided by the typede...
This is related to the current milestone topic (typification) so I suggest to keep in current milestone. Also I think... Andreas Müller
05:59 PM feature request #7408: [E+M] Support for preferred common names in data portal
This is important for E+M and was promised for 5.5 already. Ok to keep in current milestone? Andreas Müller
05:51 PM bug #2074: network independend CdmUpdaterTest
yes this can be closed Andreas Müller
04:22 PM bug #2074 (Rejected): network independend CdmUpdaterTest
I am no longer using eu.etaxonomy.cdm.database.update.CdmUpdaterTest since cdm-remote supports the `force-scheamupdat... Andreas Kohlbecker
05:47 PM feature request #5807: implement sub-distribution area inclusion in TaxonService.findTaxaAndName...
As this is E+M related I put it to highest. We may discuss who will finally fix it. I have to work on transmission en... Andreas Müller
04:45 PM feature request #5807 (New): implement sub-distribution area inclusion in TaxonService.findTaxaA...
this is still not working:
http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/search/results/taxo...
Andreas Kohlbecker
04:10 PM feature request #5807 (Feedback): implement sub-distribution area inclusion in TaxonService.find...
trying to reproduce this at the euro+med portal, since this taxon no longer is found in the caucasus portal:
http:...
Andreas Kohlbecker
05:37 PM feature request #7470 (Resolved): Verbatim type designation information
Andreas Müller
05:22 PM bug #5774: cdmserver misses to detect some errors in failed instances
I guess you are right. I was lowering the priority that much because the issue has not been reported for 2 years, but... Andreas Kohlbecker
04:03 PM bug #5774: cdmserver misses to detect some errors in failed instances
hmm, I consider this a very anoying and dagerous bug as one may not realize that some instances do work (we do not ha... Andreas Müller
05:15 PM bug #7087 (Worksforme): description/accumulateDistributions webservice can not be triggered
tested by using httpie and it works again, it seems this has neen fixed meanwhile Andreas Kohlbecker
05:05 PM Revision 3a973027 (cdmlib): ref #7106 logging if the worse case is actually happening
Andreas Kohlbecker
05:03 PM bug #7106 (Feedback): avoid factory.openSession() in CdmRepository
I am modifying the logging in mentioned case to allow us checking in the server logs if this case is actually happeni... Andreas Kohlbecker
04:34 PM feature request #8120 (Resolved): Add structural and property modifiers
Andreas Müller
10:05 AM feature request #8120 (In Progress): Add structural and property modifiers
Andreas Müller
09:28 AM feature request #8120 (Closed): Add structural and property modifiers
We need two specialized modifier types in the context of character creation:
* Structure modifier
* defining the...
Patrick Plitzner
04:18 PM bug #8131 (Rejected): reindexing fuction in dataportal setting reports fails
it was really the wrong credentials that i used Andreas Kohlbecker
04:09 PM bug #8131 (Rejected): reindexing fuction in dataportal setting reports fails
even with correct credentials "Error: Are your credentials correct?" is being reported Andreas Kohlbecker
03:52 PM bug #7938: cdmserver sub-processes (threads) with constant high cpu
this never occurred since 3 months, lowering priority Andreas Kohlbecker
03:41 PM bug #8105 (Closed): better hotfix branch stragey in git flow to avoid commits in master which are...
Andreas Kohlbecker
03:31 PM bug #8099: Error saving name type designation editor due to problem in poupeditor context
Da gab es mehrere Korrekturen und Bearbeitungen [vielleicht ein Spezialproblem, das im normalen Betrieb nicht vorkomm... Wolf-Henning Kusber
10:01 AM bug #8099: Error saving name type designation editor due to problem in poupeditor context
AHH ich glaube jetzt habe ich es. Ein alter Dump der DB hat mir*Geitleriaceae Kilgore & J.R.Johans.* auf die Sprünge... Andreas Kohlbecker
03:04 PM Revision 2a54863f (cdm-server): Merge branch 'hotfix/5.5.1'
jenkins
03:04 PM Revision 9c61ebe3 (cdm-server): jenkins: setting project version to 5.5.1
jenkins
03:02 PM Revision 9b59c16d (cdm-server): jenkins bumping cdmlib.version to 5.5.1
jenkins
03:01 PM Revision 84319ad5 (cdm-server): updating poms for 5.5.1 branch with snapshot versions
jenkins
02:57 PM Revision c9cbfe94 (cdm-server): Merge branch 'hotfix/5.5.1'
jenkins
02:57 PM Revision 82756262 (cdm-server): jenkins: setting project version to 5.5.1
jenkins
01:34 PM task #8130: Check if related feature data is cleared when supported facts type is changed
We may want to implement hard or soft validation for this. Maybe also an update script to remove existing data (if it... Andreas Müller
01:16 PM task #8130 (Feedback): Check if related feature data is cleared when supported facts type is changed
For example:
1. Set a feature to support quantitative data and assign recommended measurement units, statistical m...
Patrick Plitzner
01:28 PM bug #7703 (New): Multiple names cannot be shown in TypeDesignationDetailElement for specimens
Patrick Plitzner
01:28 PM bug #7703: Multiple names cannot be shown in TypeDesignationDetailElement for specimens
Displaying the names is not the problem. What would take time is implementing the possibility of editing them. Right ... Patrick Plitzner
01:00 PM bug #7703: Multiple names cannot be shown in TypeDesignationDetailElement for specimens
Patrick Plitzner wrote:
> Before I try to fix this: Is this a frequent use case? Because you can also just create tw...
Andreas Müller
01:18 PM Revision 4fe50de7 (cdm-server): updating poms for 5.5.1 branch with snapshot versions
jenkins
01:16 PM Revision 609caabc (cdm-webapp): jenkins: setting project version to 5.5.1
jenkins
01:16 PM Revision 26ad5193 (cdm-webapp): Merge branch 'hotfix/5.5.1'
jenkins
01:13 PM Revision 874dedf4 (cdm-vaadin): Merge branch 'hotfix/5.5.1'
jenkins
01:13 PM Revision 254467b1 (cdm-vaadin): jenkins: setting project version to 5.5.1
jenkins
01:09 PM feature request #7741: Refresh supplemental data view title when editing terms
This is still an open issue. But I would rather fix this together with the other refresh tickets of #4135. It is more... Patrick Plitzner
12:36 PM feature request #7741: Refresh supplemental data view title when editing terms
Is this still an open issue or has it been fixed with the new term editor implementation?
If not yet fixed we shou...
Andreas Müller
01:09 PM Revision 870d55c5 (cdmlib): minor
Andreas Müller
12:36 PM Revision 4b856a46 (cdmlib): Merge branch 'hotfix/5.5.1'
jenkins
12:31 PM bug #8129 (Feedback): Load images asynchronously in media details view
Loading images takes often very long if full size images with e.g. ~10MB are involved. Currently the TaxEditor become... Andreas Müller
12:27 PM bug #5632: ClassNotFoundException for org.eclipse.jetty.servlet.listener.ELContextCleaner during ...
We recently talked about this issue. I just moved it to the release to check if it still happens and if there is an e... Patrick Plitzner
12:22 PM feature request #8011 (In Progress): Implement term search view
Patrick Plitzner
11:32 AM bug #8126: Mediarepresentations should not be shown in Referencing objects view
AM:
gibt es für das Problem, dass MediaRepresentations bei den referencing objects von Media angezeigt werden eige...
Andreas Müller
11:02 AM bug #8126 (New): Mediarepresentations should not be shown in Referencing objects view
MediaRepresentations belonging to the media object therefore they should not be shown in the referencing objects view... Katja Luther
11:29 AM feature request #7860: [Master] Remaining E+M editor issues
E+M should be highest priority Andreas Müller
11:25 AM feature request #8128 (In Progress): Add indicator for feature facts and/or vocabularies which de...
Andreas Müller
11:24 AM feature request #8128 (In Progress): Add indicator for feature facts and/or vocabularies which de...
we need to distinguish if features and/or their vocabularies support taxon facts, specimen facts and/or name facts.
...
Andreas Müller
11:25 AM feature request #8124: Activate Name Facts in Taxeditor
Also consider #8128 for future implementations. Andreas Müller
11:19 AM feature request #8124: Activate Name Facts in Taxeditor
Can we also activate name facts in the same way as supplemental data are activated => if focus is explicitly on a nam... Andreas Müller
10:30 AM feature request #8124 (In Progress): Activate Name Facts in Taxeditor
Katja Luther
10:30 AM feature request #8124 (Closed): Activate Name Facts in Taxeditor
Namefacts should be shown for names in bulk editor. (see discussion in #7653)
Therefore following is needed:
* ac...
Katja Luther
11:18 AM bug #6627: Remaining cdm light issues
Can you add the name facts to the TODO list? Is there an explicit ticket? Andreas Müller
10:25 AM bug #6627: Remaining cdm light issues
the name facts should be implemented in 5.6 Katja Luther
11:07 AM task #8127 (New): [Reminder] to check if Hibernate Null Value bug still exists
see #5681 for details
https://hibernate.atlassian.net/browse/HHH-9751
Andreas Müller
11:03 AM feature request #7637: Handle intext references in CDM light
Andreas Müller wrote:
> Do we really want to keep in 5.6. We wanted to work on intext references in 5.7.
ups no, ...
Katja Luther
11:02 AM feature request #7637: Handle intext references in CDM light
Do we really want to keep in 5.6. We wanted to work on intext references in 5.7. Andreas Müller
11:00 AM task #7515: TypeDesignationStatusComparator to sort by vocabulary first and then by term order
We may also include the upcoming new term structure (using TermCollections) #6794. Andreas Müller
10:48 AM Revision 491b261a (cdmlib): jenkins: setting project version to 5.5.1
jenkins
10:37 AM feature request #8089: improve abcd preference page
Does this not fit to our current milestone which includes preferences? Andreas Müller
10:33 AM bug #8125 (New): ClassCastException when adding person to newly created team
Hallo,
vermutlich ein ungünstiges Timing ...
Bulk Editor, neues Team, cache eingegeben -> Details view, Add Person,...
Katja Luther
10:26 AM feature request #8123 (New): Make available Features a DB preference
... also distinguish taxon facts, specimen facts and name facts.
Adapt this also in the local preferences.
Stor...
Andreas Müller
10:16 AM feature request #8046: Term lists in term manager should be positiv lists
Doesn't this belong much to the focus of our current milestone (terms, preferences, typification). So maybe we can ke... Andreas Müller
10:07 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Because some major issues were implemented in 5.4. However, I think we should split the ticket for all remaining issu... Andreas Müller
09:01 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > @all: Why is this ticket still open? What is left to do?
>
>...
Patrick Plitzner
10:01 AM bug #7689 (Worksforme): Mutliple representation exception when creating taxon nodes
I think this is fixed with the restructured taxonnode wizard (see #7680) Katja Luther
09:45 AM feature request #8096 (In Progress): Implement CacheUpdater as long running task with correct pro...
Katja Luther
09:44 AM bug #8115 (In Progress): NPE when moving factual data
Katja Luther
09:35 AM feature request #8122 (New): Implement selection of modifier vocabulary for structures and proper...
In the term editor for structure and property terms it should be possible to select one or more modifier vocabularies... Patrick Plitzner
09:32 AM feature request #8121 (Closed): Allow selecting structural/property modifiers when creating a cha...
When creating a character from a structure and a property the user can select from a predefined list of available mod... Patrick Plitzner

02/21/2019

05:18 PM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Patrick Plitzner wrote:
> @all: Why is this ticket still open? What is left to do?
Isn't this quite obvious. See ...
Andreas Müller
04:41 PM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Patrick Plitzner wrote:
> @Katja: Can you take a look at my last commit please commit:taxeditor|06ae687fc2061c691d70...
Katja Luther
04:04 PM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
@Katja: Can you take a look at my last commit please commit:taxeditor|06ae687fc2061c691d70c87b1da7e8b41b903385
@al...
Patrick Plitzner
05:13 PM Revision 9a02c3fb (cdmlib): ref #8118 fix DatabaseTypeEnumTest
Andreas Müller
05:10 PM task #8118: Update MySQL drivers
I read through the change sets, all are looking as expected.
As next step we should run a test against a maria db ...
Andreas Kohlbecker
03:28 PM task #8118 (Resolved): Update MySQL drivers
Andreas Müller
02:26 PM task #8118: Update MySQL drivers
compile error fixed Andreas Müller
02:04 PM task #8118 (In Progress): Update MySQL drivers
I added both drivers to cdmlib-db (b137f4e3) Andreas Müller
02:02 PM task #8118 (Feedback): Update MySQL drivers
We are using old JDBC drivers for MySQL. ALso we do not have drivers for MariaDB. Should be added. Andreas Müller
04:47 PM Revision 48fcf86f (taxeditor): ref #8118 Remove outdated mysqlconnector dependency
Patrick Plitzner
04:46 PM Revision b599ad36 (cdm-vaadin): ref #8117 commenting orthographic corrected names filter to preve...
Andreas Kohlbecker
04:24 PM Revision 168c2abf (taxeditor): ref #8118 Update/remove mysqlconnector dependency
Patrick Plitzner
04:17 PM Revision 3e6b02bb (taxeditor): ref #8118 Update mysqlconnector dependency
Patrick Plitzner
04:02 PM Revision d8ff3161 (taxeditor): ref #7810 Fix preference check for "Open in Specimen Editor"
- remove unused IPreferenceKey Patrick Plitzner
04:01 PM Revision 06ae687f (taxeditor): ref #7810 Fix preference check for "Open in Specimen Editor"
- remove unused IPreferenceKey Patrick Plitzner
03:50 PM bug #8105: better hotfix branch stragey in git flow to avoid commits in master which are missing ...
note for developers added to the ticket description ..... Andreas Kohlbecker
03:40 PM bug #8105 (Resolved): better hotfix branch stragey in git flow to avoid commits in master which a...
by this the git-hfx-cherry-check should be executed for all HFX_FINISH jobs, in case of errors the job will FAIL sinc... Andreas Kohlbecker
03:36 PM bug #8105: better hotfix branch stragey in git flow to avoid commits in master which are missing ...
and ... using git-hfx-cherry-check.sh in gitflow-finish.sh and maven-gitflow-HOTFIX-finish.sh
Andreas Kohlbecker
03:22 PM bug #8105: better hotfix branch stragey in git flow to avoid commits in master which are missing ...
Script to check for cherries in the HFX Finish jobs created: https://dev.e-taxonomy.eu/svn/trunk/server-scripts/jenki... Andreas Kohlbecker
03:22 PM bug #7703 (Feedback): Multiple names cannot be shown in TypeDesignationDetailElement for specimens
Before I try to fix this: Is this a frequent use case? Because you can also just create two TypeDesignation with diff... Patrick Plitzner
09:18 AM bug #7703: Multiple names cannot be shown in TypeDesignationDetailElement for specimens
This belongs content wise to our current milestone. Please decide if we should move it to 5.6 and who should work on it Andreas Müller
03:13 PM Revision 1d33838c (cdmlib): ref #8115: first steps to solve problems with moving description elem...
Katja Luther
03:08 PM Revision 7920febf (cdmlib): ref #8118 added MariaDbDatabaseType
Andreas Müller
02:59 PM Revision 552649f9 (cdm-webapp): jenkins bumping cdmlib.version to 5.5.1 cdm.vaadin.version to 5.5.1
jenkins
02:58 PM Revision ca67be9d (cdm-webapp): updating poms for 5.5.1 branch with snapshot versions
jenkins
02:41 PM bug #8117: CdmFilterablePagingProviderFactory.taxonNamesWithoutOrthophicIncorrect() casues perfor...
Correction: The sql query showing the problem is:
~~~sql
select
this_.id as id1_499_2_, this_.created as cr...
Andreas Kohlbecker
12:29 PM bug #8117: CdmFilterablePagingProviderFactory.taxonNamesWithoutOrthophicIncorrect() casues perfor...
the most time is actually consumed by
![](picture588-1.png)
Do we need to update the mysql driver for some r...
Andreas Kohlbecker
12:24 PM bug #8117: CdmFilterablePagingProviderFactory.taxonNamesWithoutOrthophicIncorrect() casues perfor...
The query created by the restriction performs not so bad (55ms):
~~~sql
select
this_.id as id1_499_2_, this_...
Andreas Kohlbecker
11:32 AM bug #8117 (New): CdmFilterablePagingProviderFactory.taxonNamesWithoutOrthophicIncorrect() casues ...

in
CdmFilterablePagingProviderFactory.taxonNamesWithoutOrthophicIncorrect()
a restriction is being used whic...
Andreas Kohlbecker
02:38 PM Revision aeddf804 (cdm-vaadin): fixing probelm with unchecked optional
Andreas Kohlbecker
02:28 PM bug #8119 (Rejected): Link a PhycoBank Id in a Proof to Portal
Proof (as of 21 Feb 2019), Phytotaxa:
Heterocapsa triquetra var. litoralis Er.Lindem., nom. corr. (Turland et al., 2...
Wolf-Henning Kusber
02:23 PM Revision c60cae60 (cdmlib): ref #8118 fix compile error in SequenceTableCreator
Andreas Müller
02:09 PM Revision a8a19cd5 (taxeditor): ref #8088: fix publish flag in edit wizard
Katja Luther
02:07 PM Revision 14292cfa (taxeditor): ref #8088: fix publish flag in edit wizard
Katja Luther
02:04 PM Revision b137f4e3 (cdmlib): ref #8118 drivers for MySQL updated and MariaDB added
Andreas Müller
12:40 PM Revision 8d8da57a (cdm-vaadin): ref #8117 commenting orthographic corrected names filter to preve...
Andreas Kohlbecker
12:36 PM Revision 79564e6c (cdm-vaadin): jenkins bumping cdmlib.version to 5.5.1
jenkins
12:35 PM Revision 6d34eaf7 (cdm-vaadin): updating poms for 5.5.1 branch with snapshot versions
jenkins
12:24 PM Revision 61ff7940 (taxeditor): fix merge conflict
Katja Luther
12:19 PM Revision 8ebb13a2 (taxeditor): Further update of getting-started documentation
Patrick Plitzner
12:19 PM Revision 02f4b5a9 (taxeditor): Further update of getting-started documentation
Patrick Plitzner
12:16 PM Revision 3f7099d8 (taxeditor): fix merge conflict
Katja Luther
12:16 PM Revision ad2f71e9 (taxeditor): ref #8088: adapt labels and fix publish flag in edit wizard
Katja Luther
12:02 PM Revision 017a14f2 (taxeditor): Update getting started documentation
Patrick Plitzner
12:01 PM Revision c5af512a (taxeditor): Update getting started documentation
Patrick Plitzner
12:01 PM bug #8088: Open taxon node wizard issues
The hotfix tasks seem to work now. Andreas Müller
10:58 AM bug #8088 (Resolved): Open taxon node wizard issues
please review the hotfix tasks. Katja Luther
09:30 AM bug #8088: Open taxon node wizard issues
Hallo,
bekomme diese Fehlermeldung beim Anlegen eines neuen Taxons.
viele Grüße und schöne WE
Nadja
~~~ tex...
Katja Luther
11:37 AM bug #7772 (Resolved): Rename TermBase_inverseRepresentation to DefinedTermBase_InverseRepresentation
Renamed TermBase_inverseRepresentation to DefinedTermBase_InverseRepresentation and attribute term_id to definedTermB... Andreas Müller
11:28 AM bug #8116 (New): ProgressMonitorManager: logging instead of System.err
In the ProgressMonitorManager an ignored error is logged to `System.err.println`
All logging should go to the logg...
Andreas Kohlbecker
11:06 AM bug #8099 (Feedback): Error saving name type designation editor due to problem in poupeditor con...
Andreas Kohlbecker
11:05 AM bug #8099: Error saving name type designation editor due to problem in poupeditor context
Hakllo Henning
ich verstehe Step 2,3 oben nicht, was hat du da genau gemacht?
Andreas
Andreas Kohlbecker
10:56 AM Revision d9757a33 (taxeditor): ref #8088: fix publish flag in edit wizard
Katja Luther
10:51 AM Revision b4072196 (taxeditor): ref #8088: fix publish flag in edit wizard
Katja Luther
10:27 AM bug #6784 (Feedback): Right click menu in Specimen Editor appears after Details View refresh
When I tested, the context menu was rendered first and afterwards the details view. Could you try again? Maybe this i... Patrick Plitzner
09:49 AM bug #8115: NPE when moving factual data
Katja: I assign this to you because it has to do with the operations of the NameEditor which are executed during saving. Patrick Plitzner
09:35 AM bug #8115 (Closed): NPE when moving factual data
Steps to reproduce:
1. Create the following factual data ![](picture643-1.png)
1. Move the abstract element with ...
Patrick Plitzner
09:42 AM Revision d669970d (taxeditor): ref #8088: adapt labels and fix publish flag in edit wizard
Katja Luther
09:11 AM Revision cb7b8f2b (taxeditor): ref #6554 Reduce details view rendering
- enhance check against previous selection
- remove unused methods
Patrick Plitzner

02/20/2019

11:31 PM bug #7772 (In Progress): Rename TermBase_inverseRepresentation to DefinedTermBase_InverseRepresen...
Andreas Müller
07:13 PM bug #8114 (Duplicate): used author name cache in nomenclatural reference
For taxonomists/users it might be misleading when in the name editor the bibliographic authors are shown. In case of ... Wolf-Henning Kusber
04:35 PM Revision 18960c83 (taxeditor): ref #8088: open taxonnode from result
Katja Luther
04:08 PM Revision 2acbc78a (taxeditor): Fix potential widget disposed exception
Patrick Plitzner
04:04 PM Revision c861560c (taxeditor): Fix potential widget disposed exception
Patrick Plitzner
04:02 PM Revision c3b48aa2 (taxeditor): ref #8088: open taxonnode from result
Katja Luther
03:45 PM feature request #7923 (New): Add context menu and drag'n'drop to CharacterEditor
Patrick Plitzner
03:45 PM bug #7112 (New): Ask for saving dirty editors when closing Taxeditor
Patrick Plitzner
03:45 PM feature request #6774 (New): Implement OWL export
Patrick Plitzner
03:36 PM Revision 3a99aa7c (cdmlib): ref #8088: fix save taxonnode method
Katja Luther
03:33 PM Revision 6f2311af (cdmlib): ref #8088: fix save taxonnode method
Katja Luther
03:23 PM Revision 149c69ec (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
03:20 PM Revision ac0c5f74 (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner
02:43 PM Revision 4877da13 (cdmlib-apps): Import terms as Features instead of modifiers
- Add idInSource, idInVocabulary Patrick Plitzner
02:29 PM bug #6205 (Duplicate): Move excluded nodes to the bottom of the list in TaxEditor navigator
this is already implmented in #6547 Katja Luther
12:19 PM bug #8113 (In Progress): Update TypeDesignationStatus labels
Andreas Müller
12:19 PM bug #8113 (In Progress): Update TypeDesignationStatus labels
Currently NameTypeDesignations use upper case while SpecimentTypeDesig uses lower case (or other way round). ALso che... Andreas Müller
12:18 PM Revision 774459a9 (taxeditor): ref #8088: use existing taxon for new taxonnode or when editing node
Katja Luther
12:18 PM Revision 6ad6a6e4 (taxeditor): ref #8088: fix TOE in edit taxon node wizard when changing taxon
Katja Luther
12:07 PM Revision 3adf46dc (taxeditor): ref #8088: taxon should be selectable in taxonnode wizard when edi...
Katja Luther
12:04 PM Revision da113e80 (cdmlib): ref #8088: save newly created taxonnode with existing taxon
Katja Luther
12:01 PM Revision aa5b9df6 (cdmlib): ref #8088: save newly created taxonnode with existing taxon
Katja Luther
12:00 PM Revision ddc81360 (cdmlib): fix save taxonnode
Katja Luther
11:59 AM Revision 72b32530 (cdmlib): fix lazyLoading exception when creating new taxonnode
Katja Luther
11:51 AM Revision 7fefb32a (taxeditor): Updated version in pom / project files to taxeditor version : 5.5....
jenkins
11:49 AM Revision 795ee1e1 (cdmlib): updating poms for 5.5.1 branch with snapshot versions
jenkins
11:34 AM Revision 7e2d59f9 (cdmlib): ref #8088: save newly created taxonnode with existing taxon
Katja Luther
11:34 AM Revision aeb812fd (cdmlib): ref #8088: save newly created taxonnode with existing taxon
Katja Luther
10:21 AM Revision 3b0ec7a1 (taxeditor): ref #8088: use existing taxon for new taxonnode or when editing node
Katja Luther
09:55 AM Revision 0d3d2e38 (taxeditor): ref #8088: fix TOE in edit taxon node wizard when changing taxon
Katja Luther
09:52 AM bug #8088: Open taxon node wizard issues
Ich habe versucht das Taxon eines Taxonnodes zu ändern und bekam den Fehler unten.
Gibt es dafür schon ein Ticket? K...
Katja Luther
09:45 AM Revision 4b7c1b80 (cdmlib-apps): Import plant glossary categories as modifier terms
Patrick Plitzner

02/19/2019

11:19 PM bug #8112: Refresh for Group doesn't work
This seems to be related to #2414 though #2414 is closed. Maybe behavior changed with remoting.
It is also relevan...
Andreas Müller
11:15 PM bug #8112 (New): Refresh for Group doesn't work
How to:
* Open User bulk editor and Group bulk editor and search for "*"
* In User bulk editor choose a user and ...
Andreas Müller
11:02 PM bug #8111 (Closed): User selection dialog for groups does not filter out existing users
... but shows all users by "*". Same holds for Group selection dialog for Users.
Andreas Müller
06:57 PM feature request #7912: Enhance checkbox tree viewer
Please always add the follow up tickets to the "related issues" section, too. Andreas Müller
05:57 PM Revision a94f8d8f (cdmlib): fix CacheUpdater
Andreas Müller
05:57 PM Revision a5902245 (cdmlib): implement merge for ImportResult
Andreas Müller
05:57 PM Revision 0fd9720a (cdmlib): cleanup
Andreas Müller
05:46 PM bug #8097: Problem with inserting a section - inReference is "lost"
issue completed.
Please review.
Andreas Kohlbecker
05:46 PM bug #8097 (Resolved): Problem with inserting a section - inReference is "lost"
Applied in changeset commit:cdm-vaadin|2bcb1498b2db48c720edfcfcac25e733be35cfb8. Andreas Kohlbecker
05:07 PM bug #8097: Problem with inserting a section - inReference is "lost"
As first solution to this problem we decided on making the inReference field required for all iSection refernfence ty... Andreas Kohlbecker
05:46 PM Revision 2bcb1498 (cdm-vaadin): fix #8097 inReference field required for section reference types
Andreas Kohlbecker
04:48 PM bug #5699 (Closed): user profile settigs in cdm_dataportal module done wrong
Andreas Kohlbecker
04:48 PM bug #5699 (Resolved): user profile settigs in cdm_dataportal module done wrong
Applied in changeset commit:cdm-dataportal|bf31af5f546f2b686f6d05c1357ce41d4bf6d09c. Andreas Kohlbecker
04:46 PM bug #5699: user profile settigs in cdm_dataportal module done wrong
this feature isn't used in any of the portals can can be removed.
Andreas Kohlbecker
04:48 PM Revision bf31af5f (cdm-dataportal): fix #5699 complete removal of unused per user default tab set...
Andreas Kohlbecker
04:34 PM Revision 533b4c79 (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
04:33 PM Revision 264a8b3c (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner
04:08 PM bug #8104 (Closed): TaxonName.getLastNamePart erroneously renamed .getFamiliyNamePart
The revert looks reasonable Andreas Müller
11:31 AM bug #8104: TaxonName.getLastNamePart erroneously renamed .getFamiliyNamePart
Please can you have a quick look on the reversion of your commit? Andreas Kohlbecker
11:30 AM bug #8104 (Resolved): TaxonName.getLastNamePart erroneously renamed .getFamiliyNamePart
Applied in changeset commit:cdmlib|6b548bff807c53bdc4e3676d4b74b83b8f31be4f. Andreas Kohlbecker
04:04 PM feature request #7747: Enhance display for URI element
The space is reserved by the URI element for error messages when parsing the URI.
![](picture394-1.png)
I chang...
Patrick Plitzner
04:01 PM Revision 21e704da (cdmlib-apps): ref #7420 last changes to Phycobank higher classification import
Andreas Müller
02:49 PM feature request #7695 (In Progress): web service providing compact TypeDesignation representation...
Andreas Müller
12:53 PM bug #8110 (New): Editing name in bulkeditor sets nameEditor dirty, but saving nameEditor after bu...
when editing a name which is open in name bulk editor and in name editor sets both editors dirty. But the changes are... Katja Luther
11:30 AM Revision 6b548bff (cdmlib): fix #8104 renaming familiyNamePart back to lastNamePart
Andreas Kohlbecker
11:02 AM feature request #4922: GrantedAuthorities not reusable anymore
I have concerns about duplicating GAs as this will complicate first data inserters and managing of default GAs in gen... Andreas Kohlbecker
10:27 AM task #8109: Concept for linking from taxon entries to name pages
most important will be that it is configurable per project how and where all the different information is shown. Andreas Müller
09:29 AM task #8109 (New): Concept for linking from taxon entries to name pages
Taxon entries in the data portal do not allow to navigate to the according name page.
This will become important o...
Andreas Kohlbecker
10:26 AM Revision d88833a9 (cdmlib): ref #8011 Fix serialization problem
- Use Map.Entry instead of hibernate.envers.Pair Patrick Plitzner
10:25 AM Revision bf45901f (taxeditor): ref #8011 Adapt to cdmlib change of Pair to MapEntry
Patrick Plitzner
10:24 AM Revision 3af5dbb6 (taxeditor): ref #8011 Fix potential NPE
Patrick Plitzner
10:14 AM feature request #7653 (In Progress): [DISCUSS] Delete NameFacts => Result: no
We decided to keep name facts to handle categories like "Notes on typification" or "Etymology".
We still need to ...
Andreas Müller
09:18 AM feature request #8108: Name page shows complete name information (I)
Hallo,

...

Allerdings ist die Frage schon interessant: Das wirkliche Potential Taxon fehlt halt in >99% der F...
Andreas Kohlbecker
09:17 AM feature request #8108: Name page shows complete name information (I)
Hallo,
will ja nicht pingelig sein, aber ein „Name used in Source“ ist ja im Prinzip ein Potential Taxon und kann ...
Andreas Kohlbecker
09:16 AM feature request #8108: Name page shows complete name information (I)
AM:
Wichtig wäre hier auch die Frage, wie man diese expliziten Namensinformationen auf einer normalen Taxonpage ve...
Andreas Kohlbecker
09:15 AM feature request #8108 (Resolved): Name page shows complete name information (I)
Derzeit ist diese Seite mehr oder weniger nur ein Weiterleitungsmechanismus zu den zugehörigen Taxa.

Die besser a...
Andreas Kohlbecker

02/18/2019

10:34 PM feature request #8017 (In Progress): TypeDesignations need sources additional to lectotypifcation...
Andreas Müller
10:26 PM Revision 543f3969 (cdmlib): fix save taxonnode
Katja Luther
06:05 PM bug #8107 (Feedback): NPE when throwing PopupEditorException in AbstractPopupEditor
Andreas Kohlbecker
06:05 PM bug #8107: NPE when throwing PopupEditorException in AbstractPopupEditor
[Henning:]
> Hier waren Gattungsnamen vor dem Import nicht verfügbar, daher wurde das Pflichtfeld Gattungsname nic...
Andreas Kohlbecker
05:01 PM bug #8107 (In Progress): NPE when throwing PopupEditorException in AbstractPopupEditor
The NPE occurred during while creating the PopupEditorException to be thrown in turn of an other exception which has ... Andreas Kohlbecker
04:51 PM bug #8107 (Closed): NPE when throwing PopupEditorException in AbstractPopupEditor
Heba reported an NPE which occurred while saving a name popup editor:
Problem beim Speichern um 10:08 Uhr.
http:/...
Andreas Kohlbecker
05:25 PM Revision 592b9851 (cdm-vaadin): ref #8107 getFieldGroup() returns Optional<FieldGroup> to avoid N...
Andreas Kohlbecker
04:40 PM Revision 0c1dd4b9 (cdmlib): ref #8011 Make dtos Serializable
Patrick Plitzner
04:37 PM Revision 070e6317 (taxeditor): ref #8088: taxon should be selectable in taxonnode wizard when edi...
Katja Luther
04:11 PM feature request #8106 (Closed): improve image gallery settings labeling
done! Andreas Kohlbecker
04:11 PM feature request #8106 (Resolved): improve image gallery settings labeling
Applied in changeset commit:cdm-dataportal|5358baffb125a13d97910717acfcca8e978d63f5. Andreas Kohlbecker
04:03 PM feature request #8106 (Closed): improve image gallery settings labeling
requested by AM:
Vielleicht könnte man bei der Configuration den Text noch etwas anpassen, so dass klar ist was pa...
Andreas Kohlbecker
04:11 PM Revision 5358baff (cdm-dataportal): fix #8106 better labels for the imagegallery settings related...
Andreas Kohlbecker
04:09 PM Revision 79af0b2b (cdmlib): fix lazyLoading exception when creating new taxonnode
Katja Luther
03:55 PM Revision 273e1f05 (cdmlib-apps): Implement Prometheus properties import
Patrick Plitzner
02:34 PM Revision e89c1115 (cdm-dataportal): details page for specimen with item list
Katja Luther
01:55 PM Revision af7030a7 (taxeditor): ref #4227 Trim .classpath template file
Patrick Plitzner
01:55 PM Revision b11e5ce8 (taxeditor): ref #4227 Delete .settings folder for test and webapp plugin
Patrick Plitzner
01:55 PM Revision f1ae6ccd (taxeditor): ref #4227 Fix file deletion in setup-project.sh
Patrick Plitzner
12:22 PM bug #8105 (In Progress): better hotfix branch stragey in git flow to avoid commits in master whic...
During the release of the taxeditor 5.5.0 it turned out, that the `master`branch has received commits from the `hotfi... Andreas Kohlbecker
11:42 AM task #7811: Import higher classifications
I give this back for review Andreas Müller
10:30 AM Revision e91eca08 (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
10:30 AM Revision a272cd08 (taxeditor): Remove double initialisation of vocabularies in term editor
Patrick Plitzner
10:19 AM Revision 18190ef3 (taxongraph-view): switching base url to api.phycobank.org
Andreas Kohlbecker
10:16 AM Revision 7dcedec2 (taxongraph-view): non minified version of dagre.js
Andreas Kohlbecker
10:13 AM Revision ba56c9d7 (taxongraph-view): adding updated full test data set
Andreas Kohlbecker
09:51 AM bug #8104 (Closed): TaxonName.getLastNamePart erroneously renamed .getFamiliyNamePart
**The TaxonName property `lastNamePart` has erroneously been changed during the refactoring for #7238 to `familyNam... Andreas Kohlbecker
09:40 AM Revision 5937d209 (taxeditor): ref #8011 Implement experimental occurence facet search
Patrick Plitzner
09:39 AM Revision b558cbe6 (cdmlib): ref #8011 Add service method to find DerivateDtos
Patrick Plitzner
09:38 AM Revision a731ca32 (cdmlib): ref #8011 Make entity reference Serializable
Patrick Plitzner

02/15/2019

04:57 PM bug #8101 (New): cdm-server docker container uses wrong timezone
The docker container uses UTC but should be in the same timezone as the host system.
~~~~
edit-production ~ # dat...
Andreas Kohlbecker
04:40 PM bug #8098 (Duplicate): Cache update for Portal view
I can no longer reproduce this problem, the reference looks ok now.
I thus will close this issue as duplicate of #...
Andreas Kohlbecker
04:02 PM bug #8098: Cache update for Portal view
seems to be a result from update problem in documented in #8100 Wolf-Henning Kusber
03:24 PM bug #8098 (Duplicate): Cache update for Portal view
Documentation (release version):
ID 100486 was prepared as shown in the screen shot.
Under curation the journal "...
Wolf-Henning Kusber
04:37 PM bug #8100: Cache update in UI
It seems as if the updating of in-reference Article is not causing the contained reference section to be updated. Andreas Kohlbecker
04:30 PM bug #8100: Cache update in UI
in the article just the journal was missing Wolf-Henning Kusber
04:30 PM bug #8100: Cache update in UI
Did not update the in-reference Wolf-Henning Kusber
04:29 PM bug #8100: Cache update in UI
Did you update the inreference "Fottea"? The Article was not touched? Andreas Kohlbecker
04:00 PM bug #8100 (New): Cache update in UI
If a reference has been not correct when preparing novelties
And the reference was updated,
the uncorrected referen...
Wolf-Henning Kusber
03:51 PM bug #8099 (Closed): Error saving name type designation editor due to problem in poupeditor context
Documentation:
Step 1: open Name type of "Geitleriaceae"
Step 2: type name was wrong, select unregistered genus nam...
Wolf-Henning Kusber
02:39 PM Revision 4b8701e3 (taxeditor): ref #8011 Sort facets by category
Patrick Plitzner
02:33 PM bug #8097 (Closed): Problem with inserting a section - inReference is "lost"
IAPT Entry:
BACILLARIOPHYCEAE
Astartiella bahusiensis (Grunov) Witk., Lange-Bert. & Metzeltin
in Biblioth. Diato...
Wolf-Henning Kusber
02:31 PM Revision 0a0a634c (taxeditor): ref #8011 Layout improvements
- wrap description text
- Use SashForm for SearchComposite
Patrick Plitzner
12:55 PM task #7811: Import higher classifications
Euastrum exists with 2 authors. Arbitrarily Euastrum Ralfs, Brit. Desmid.: 49, 78. 1848 has been taken for import of ... Andreas Müller
12:24 PM task #7811: Import higher classifications
Wolf-Henning Kusber wrote:
> Navicula Grunow is an old import error to be deleted
>
> Navicula Bory is the only r...
Andreas Müller
12:21 PM task #7811: Import higher classifications
Wolf-Henning Kusber wrote:
> Arachnophyllum exists 2x in ae5e4774-9657-4910-812c-937e2ebe5647. Once as child of Dele...
Andreas Müller
12:20 PM task #7811: Import higher classifications
Wolf-Henning Kusber wrote:
> Gymnocystodinium exists 2x in 174d5905-9b28-406d-8e15-98958123b4ae: with parent Gymnodi...
Andreas Müller
11:40 AM task #7811: Import higher classifications
Navicula Grunow is an old import error to be deleted
Navicula Bory is the only right one
Wolf-Henning Kusber
11:37 AM task #7811: Import higher classifications
Navicula exists 2x as accepted taxon in Phycobank, with 2 different authors. During import of 03c791d0-2da4-42d0-8bc6... Andreas Müller
11:13 AM task #7811: Import higher classifications
Arachnophyllum exists 2x in ae5e4774-9657-4910-812c-937e2ebe5647. Once as child of Delesserioideae, 2nd time as child... Wolf-Henning Kusber
11:07 AM task #7811: Import higher classifications
Gymnocystodinium exists 2x in 174d5905-9b28-406d-8e15-98958123b4ae: with parent Gymnodiniaceae and child Gymnodinium ... Wolf-Henning Kusber
11:01 AM task #7811: Import higher classifications
Wolf-Henning Kusber wrote:
> #9
> Eolimna exists twice in 03c791d0-2da4-42d0-8bc6-15a2154ad241.
> To be deleted: O...
Andreas Müller
10:54 AM task #7811: Import higher classifications
Arachnophyllum exists 2x in ae5e4774-9657-4910-812c-937e2ebe5647. Once as child of Delesserioideae, 2nd time as child... Andreas Müller
10:50 AM task #7811: Import higher classifications
Gymnocystodinium exists 2x in 174d5905-9b28-406d-8e15-98958123b4ae: with parent Gymnodiniaceae and child Gymnodinium ... Andreas Müller
10:17 AM task #7811: Import higher classifications
#9
Eolimna exists twice in 03c791d0-2da4-42d0-8bc6-15a2154ad241.
To be deleted: Once as direct child of Naviculales...
Wolf-Henning Kusber
09:35 AM task #7811: Import higher classifications
Ordo of Polypodochrysis in 03c791d0-2da4-42d0-8bc6-15a2154ad241 (Pinguioch **r** ysidales)
differs from above Ordo...
Andreas Müller
09:28 AM task #7811: Import higher classifications
Eolimna exists twice in 03c791d0-2da4-42d0-8bc6-15a2154ad241. Once as direct child of Naviculales (line 754), other t... Andreas Müller
09:23 AM task #7811: Import higher classifications
Also there is a new column subfam. As rank columns are hardcoded in import code all new columns need to be explicitly... Andreas Müller
12:49 PM Revision 5b158275 (taxeditor): ref #8011 Remove unused parameters
Patrick Plitzner
12:49 PM Revision 219d7e87 (taxeditor): ref #8011 Use termType as facet category
Patrick Plitzner
12:48 PM Revision 394be96b (cdmlib): ref #8011 Add uri and termType to DTO query
Patrick Plitzner
12:02 PM bug #8088: Open taxon node wizard issues
Something went wrong in previous ticket #7794. The taxon itself should be selectable for both "New" and "Edit" mode. ... Andreas Müller
09:15 AM Revision ec7d18e2 (taxeditor): ref #8011 Set termType in search controller constructor
Patrick Plitzner
09:10 AM Revision 73addc03 (cdmlib): ref #8011 Allow null for termType to ignore this filter
Patrick Plitzner
09:05 AM Revision 3ff018d4 (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
09:04 AM Revision b73f045d (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner

02/14/2019

04:20 PM task #8091: Discuss Referencetype PrintSeries with respect to user needs of PhycoBank and taxonom...
yes please Andreas Kohlbecker
10:45 AM task #8091 (In Progress): Discuss Referencetype PrintSeries with respect to user needs of PhycoBa...
Andreas Müller
10:45 AM task #8091: Discuss Referencetype PrintSeries with respect to user needs of PhycoBank and taxonom...
ok, that I have a look on this first? Andreas Müller
02:47 PM Revision 445e8bf0 (taxeditor): Merge branch 'release/5.5.0' into develop
jenkins
02:47 PM Revision 1b2434c8 (taxeditor): Merge branch 'release/5.5.0'
jenkins
02:39 PM Revision b3b49290 (taxeditor): deleting file to solve merge conflicts during the release which ca...
Andreas Kohlbecker
02:37 PM Revision d3622550 (cdmlib-apps): update pom versions in appimport
Andreas Müller
02:30 PM Revision 5352fccb (cdmlib-apps): minor
Andreas Müller
02:29 PM Revision 92efed9c (cdmlib-apps): latest changes to Greece image import
Andreas Müller
02:28 PM Revision cd79d676 (cdmlib-apps): ref #1444 ref #7976 some changes to ERMS import
Andreas Müller
02:13 PM Revision a85eb65a (taxeditor): Updated version in pom / project files to taxeditor version : 5.6....
jenkins
02:13 PM Revision 62bd08ed (taxeditor): Updated version in pom / project files to taxeditor version : 5.5....
jenkins
02:08 PM Revision c2a2c9f0 (taxeditor): also remove checklist editor from fragment.e4xmi
Katja Luther
02:00 PM Revision 2a4913e6 (taxeditor): remove old checklistEditor classes
Katja Luther
01:44 PM Revision 9ef77492 (taxeditor): ref #8011 Filter term results by term type FEATURE
Patrick Plitzner
01:43 PM Revision 1da9046b (cdmlib): ref #8011 Add termType to service method
Patrick Plitzner
11:37 AM Revision 08267c16 (taxeditor): ref #8011 Use term search in feature tree context menu to add feat...
Patrick Plitzner
11:35 AM Revision 23fa8987 (taxeditor): ref #8011 Add search button to term search
Patrick Plitzner
11:34 AM Revision 35b01984 (taxeditor): ref #8011 Refactor AddFeatureOperation to use uuid
Patrick Plitzner
11:21 AM Revision df5691ff (taxeditor): Merge branch 'release/5.5.0' into develop
jenkins
11:21 AM Revision cfa5702f (taxeditor): Merge branch 'release/5.5.0'
jenkins
11:16 AM Revision 44944fb8 (taxeditor): Updated version in pom / project files to taxeditor version : 5.6....
jenkins
11:16 AM Revision 16b07bc6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.5....
jenkins
10:46 AM task #7918 (Closed): Revision of reference type specific properties
As remaining issues are now in #8091 we can close this ticket. Andreas Müller
10:42 AM Revision e744728b (cdm-server): Merge branch 'release/5.5.0' into develop
jenkins
10:42 AM Revision e9cc6c37 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
10:42 AM bug #7998 (Closed): Store newly created Characters in selected vocabulary
I think we can close this ticket now. Andreas Müller
10:41 AM Revision 11b49aac (cdm-server): updating poms for branch'release/5.5.0' with non-snapshot versions
jenkins
10:41 AM Revision 5907dcdc (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
10:41 AM Revision ec3f9371 (cdm-webapp): Merge branch 'release/5.5.0' into develop
jenkins
10:41 AM Revision 6e016ec0 (cdm-webapp): updating poms for branch'release/5.5.0' with non-snapshot versions
jenkins
10:40 AM Revision 759f6dd7 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.5.0
jenkins
10:30 AM Revision 3c6137bf (cdm-vaadin): Merge branch 'release/5.5.0' into develop
jenkins
10:30 AM Revision 079231b5 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
10:27 AM Revision a5fbcd21 (cdm-dataportal): Merge branch 'release/5.5.0' into develop
jenkins
10:27 AM Revision 4993d534 (cdm-dataportal): updating poms for branch'release/5.5.0' with non-snapshot ver...
jenkins
10:27 AM Revision b8f92085 (cdm-vaadin): updating poms for branch'release/5.5.0' with non-snapshot versions
jenkins
10:27 AM Revision 27499fee (cdm-dataportal): release-preparation: production level css
jenkins
10:27 AM Revision 37df124b (cdm-vaadin): jenkins bumping cdmlib.version to 5.5.0
jenkins
10:26 AM Revision 28a7edb0 (cdmlib): Updating develop poms back to pre merge state
jenkins
10:26 AM Revision fd8a1882 (cdmlib): Merge branch 'master' into develop
jenkins
10:26 AM Revision 1c2d3c56 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
10:26 AM Revision 0df9a844 (cdmlib): Merge branch 'release/5.5.0'
jenkins
10:10 AM Revision 29284bac (cdmlib): updating poms for branch'release/5.5.0' with non-snapshot versions
jenkins
09:43 AM Revision c0f28148 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.5.0-SN...
jenkins
09:43 AM Revision 3ab1f813 (cdm-webapp): updating poms for 5.6.0-SNAPSHOT development
jenkins
09:43 AM Revision df40fb3f (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.6.0-SN...
jenkins
09:42 AM Revision 5db4b0f8 (cdm-vaadin): jenkins bumping cdmlib.version to 5.5.0-SNAPSHOT
jenkins
09:41 AM Revision 70675b1f (cdm-vaadin): updating poms for 5.6.0-SNAPSHOT development
jenkins
09:41 AM Revision b9033cb4 (cdm-vaadin): jenkins bumping cdmlib.version to 5.6.0-SNAPSHOT
jenkins
09:41 AM Revision e33dc21e (cdm-dataportal): updating poms for 5.6.0-SNAPSHOT development
jenkins
09:41 AM Revision 60938c99 (cdm-server): updating poms for 5.6.0-SNAPSHOT development
jenkins
09:39 AM Revision 4ca23610 (cdmlib): updating poms for 5.6.0-SNAPSHOT development
jenkins
08:56 AM feature request #8030 (Closed): Cache updater service methods externalized and base class specific
review completed, no issues found Andreas Kohlbecker
08:55 AM bug #7874 (Closed): TeamOrPersonBase entity can become unusable due to replacement of the title c...
looks like fixed by 100% Andreas Kohlbecker

02/13/2019

08:55 PM Revision c4731c58 (taxeditor): typo
Katja Luther
08:49 PM Revision 7a5d7871 (taxeditor): handle remote access exception correctly
Katja Luther
06:52 PM bug #7874 (Resolved): TeamOrPersonBase entity can become unusable due to replacement of the title...
This should be fully fixed now with fixing #8030 Andreas Müller
01:45 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
You are right! Sorry for this bug in the assertion. Please correct it to :
~~~java
assertEquals(
"Expecting n...
Andreas Kohlbecker
01:03 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
I do not understand this line in user tests:
~~~
assertEquals("Expecting nomenclaturalTitle to be set sin...
Andreas Müller
06:51 PM feature request #8096 (Closed): Implement CacheUpdater as long running task with correct progress...
Andreas Müller
06:41 PM feature request #8030 (Resolved): Cache updater service methods externalized and base class specific
I think this is fixed now. Please review. Andreas Müller
01:19 PM feature request #8030 (In Progress): Cache updater service methods externalized and base class sp...
Andreas Müller
05:03 PM Revision 27bed44b (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner
05:02 PM Revision e6b43eb3 (cdmlib): ref #8011 Compare on lower case labels
Patrick Plitzner
05:02 PM Revision 6b8b51a2 (taxeditor): ref #8011 Enhance sort on search results
- extracted util method for search string based sorting Patrick Plitzner
04:17 PM Revision 784fe709 (cdmlib): ref #8030 rename updateTitleCacheImpl to updateCachesImpl
Andreas Müller
04:12 PM Revision 57d5b579 (cdmlib): ref #8030 rename updateTitleCache to updateCaches
Andreas Müller
03:51 PM Revision e11d18c9 (cdmlib): ref #8030 further tests
Andreas Müller
02:49 PM Revision bfa30d38 (cdmlib): ref #8030 add tests for nameService (not yet finished) and fixing upd...
Andreas Müller
01:48 PM Revision 0d98b044 (taxeditor): ref #8011 Remove debug listener
Patrick Plitzner
01:48 PM Revision dd28ea69 (cdmlib): ref #8011 Make AbstractTermDto comparable
Patrick Plitzner
01:47 PM Revision d3d62292 (taxeditor): ref #8011 Sort search results
Patrick Plitzner
01:20 PM Revision 5d2a77b2 (cdmlib): ref #8030 Move cache updating to model classes, no tests yet
Andreas Müller
01:17 PM Revision 40a73ef7 (cdmlib): ref #7874 fix incorrect nomTitle test
Andreas Müller
01:15 PM Revision 08183f99 (cdmlib): cleanup
Andreas Müller

02/12/2019

05:19 PM Revision 913140ea (taxeditor): ref #8011 Add warning for exceeding search result limit (500)
Patrick Plitzner
05:08 PM Revision 32e0425e (taxeditor): ref #8011 Show term description in search results
Patrick Plitzner
05:07 PM Revision 41d4823b (cdmlib): ref #8011 Add representation text to TermDtos
Patrick Plitzner
03:57 PM bug #7998 (Resolved): Store newly created Characters in selected vocabulary
Patrick Plitzner
09:43 AM bug #7998: Store newly created Characters in selected vocabulary
in 5.5.0.201902082215 in rem_conf_am I did not get the exception anymore. Katja Luther
03:54 PM Revision 187cb471 (taxeditor): Add checkbox to result composite
Patrick Plitzner
02:44 PM Revision 13621704 (cdmlib): Merge branch 'develop' into termSearch
Patrick Plitzner
02:42 PM Revision 81d4d139 (taxeditor): Merge branch 'develop' into termSearch
Patrick Plitzner
02:24 PM Revision 06cbb2b0 (taxeditor): Remove double initialisation of vocabularies in term editor
Patrick Plitzner
02:03 PM feature request #8095 (New): response model for registration submission webservice
reusing this ticket for related issue ... Andreas Kohlbecker
01:59 PM feature request #8095 (Duplicate): response model for registration submission webservice
duplicates #8086 Andreas Kohlbecker
01:57 PM feature request #8095 (New): response model for registration submission webservice

web service URLs:
POST: /registration/
PUT: /registration/{phycobankID-urlencoded}
The submission da...
Andreas Kohlbecker
01:33 PM Revision 515c0724 (taxeditor): fix saving for edited factual data in bulk editor
Katja Luther
11:43 AM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
Adding testcase which reproduces the bug mentioned in comment 20 commit:b4be3c3e

`IdentifiableServiceBase.upda...
Andreas Kohlbecker
11:17 AM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
all commits went into cdmlib-model and cdmlib-service, adapting the category. Andreas Kohlbecker
11:41 AM Revision b4be3c3e (cdmlib): ref #7874 adding missing testcase related to Person nomenclatural tit...
Andreas Kohlbecker
11:33 AM bug #8051 (Closed): improve display of registration items lists
Also a test case has been added, closing ticket Andreas Kohlbecker
11:29 AM Revision 5dc5c2ed (taxeditor): ref #7887 Compare labels on lower case strings
Patrick Plitzner
11:09 AM Revision 720edc33 (cdm-dataportal): ref #8051 more tests for specimen types in the registration page
Andreas Kohlbecker
09:59 AM feature request #8094 (New): Show title for factual data view with referenced object
For the factual data view we need a title which shows whether the view belongs to an object in focus and which object... Katja Luther
09:21 AM Revision 76e5b1e4 (taxeditor): correct handling of default values when fieldEditor is used
Katja Luther
09:21 AM Revision fcaa1f56 (taxeditor): fix NPE
Katja Luther
09:21 AM Revision 9cd9ba55 (taxeditor): correct handling of publish flag preference
Katja Luther
09:00 AM Revision 208ded38 (cdmlib): minor
Katja Luther

02/11/2019

12:38 AM bug #7998: Store newly created Characters in selected vocabulary
Even with the latest version from 10pm the problem still exists. Andreas Müller
11:10 PM bug #7998 (Feedback): Store newly created Characters in selected vocabulary
With the latest version 5.5.0.201902111448 I get NoSuchMethodException which is strange because the method seems to b... Andreas Müller
12:26 PM bug #7998 (Resolved): Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> Sorry as the comment list is long already I forgot to check the most important issue again w...
Patrick Plitzner
12:30 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Nomenclatural Code in DB prefs can not be deleted by setting to defaults. Something wrong with the deleting if value ... Andreas Müller
12:27 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Restore defaults on local prefs restored the defaults stored in the predicates. One could also expect the current DB ... Andreas Müller
12:20 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
On local prefs Name Details View page the "Restore Defaults" button seems to be enabled even if NDV does not allow ov... Andreas Müller
12:18 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
ON DB prefs page Name Details View the taxon sec attributes are disabled if NDV is disabled but they are not grey. On... Andreas Müller
12:10 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
With empty preferences when only the DistrEditor page is opened without any change afterwards the preferences for dis... Andreas Müller
11:53 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Also it is not possible to delete this preference by setting it to default. If no vocabulary...
Andreas Müller
03:07 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
now the setting of defaults is implemented for db and for local preferences.
For setting the term/vocabulary sele...
Katja Luther
10:43 PM feature request #6805 (Closed): Implement drag and drop from Term Editor (Feature) to FeatureTree...
I also can't reproduce it anymore, so I think we can close the ticket, open again if it reappears. Andreas Müller
08:29 AM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Patrick Plitzner wrote:
> > > > A...
Patrick Plitzner
08:21 AM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Andreas Müller wrote:
> Now I get an error dialog "The connection to the server could not be established because the...
Patrick Plitzner
07:06 PM bug #8051: improve display of registration items lists
Review: correct including all types. Ticket can be closed. Wolf-Henning Kusber
06:35 PM bug #8051: improve display of registration items lists
Problem solved! Andreas Kohlbecker
05:21 PM bug #8051: improve display of registration items lists
> Question: Why the holotype is missing? Is was databased as first entry in 100301.
this is in deed a bug which I ...
Andreas Kohlbecker
04:20 PM bug #8051: improve display of registration items lists

Registration Id: http://phycobank.org/100301
Eucocconeis lacusbaicalensis Kulikovskiy & Lange-Bert. in Lake Ba...
Wolf-Henning Kusber
04:09 PM bug #8051: improve display of registration items lists
For accessing the registration http://phycobank.org/100301 on the test server please use http://test.e-taxonomy.eu/d... Andreas Kohlbecker
10:01 AM bug #8051: improve display of registration items lists
Point 1
search for Scientific name = Planothidium
Search result resolved (see description)
Point 4
search for ...
Wolf-Henning Kusber
06:34 PM Revision f5396e17 (cdm-dataportal): ref #8051 solving bug related to missing specimen type design...
Andreas Kohlbecker
06:25 PM Revision 67f5eac2 (cdm-dataportal): ref #8051 solving bug related to missing specimen type design...
Andreas Kohlbecker
04:20 PM feature request #8093 (Closed): harmonize registrationId links and make tesing easier
registrationId links are using in most cases the persistend identifier as `href` attribute. In one case the according... Andreas Kohlbecker
03:32 PM Revision a9fe6b8d (taxeditor): ref #7998 fix potential NPE
Patrick Plitzner
03:15 PM Revision f54da8eb (taxeditor): ref #7849: minor
Katja Luther
03:07 PM feature request #8092 (New): set default for term and vocabulary selection preferences in selecti...
copied from #7849#note-75
See also #7849#note-76 and #8045
Katja Luther
02:55 PM Revision 6855b870 (taxeditor): ref #7849: set default for term selection on local preferences
Katja Luther
02:41 PM bug #8090: Reference editor: Label In proceedings in InProceedings missing
done! Please review once server is up to date. Andreas Kohlbecker
02:40 PM bug #8090 (Resolved): Reference editor: Label In proceedings in InProceedings missing
Applied in changeset commit:cdm-vaadin|d096791b048af2ef4bd541f54cb9e2de2127b955. Andreas Kohlbecker
02:38 PM bug #8090 (In Progress): Reference editor: Label In proceedings in InProceedings missing
Andreas Kohlbecker
10:25 AM bug #8090 (Closed): Reference editor: Label In proceedings in InProceedings missing
Reference editor:
Label "In proceedings" in reference type "InProceedings" missing
(found reviewing #7918)
![](pic...
Wolf-Henning Kusber
02:40 PM Revision d096791b (cdm-vaadin): fix #8090 fixing missing inProceedings label in reference editor
Andreas Kohlbecker
02:34 PM Revision 9445fcdc (taxeditor): ref #7849: if term selection is null the default value is used -> ...
Katja Luther
02:24 PM Revision dd2e9b75 (taxeditor): ref #7849: default values in local preferences
Katja Luther
02:24 PM Revision ff8dd44d (taxeditor): ref #7849: update name details page when restore default
Katja Luther
12:24 PM Revision 3e81c99c (taxeditor): ref #7998 hard-coded filter for Feature and Name Feature vocabularies
Patrick Plitzner
12:24 PM Revision 4a201e6d (taxeditor): Do not show "New" menu when not connected
Patrick Plitzner
12:24 PM Revision 7b130084 (taxeditor): ref #7998 Extend selection dialog to allow multiple filter elements
Patrick Plitzner
12:24 PM Revision 85bd68d3 (taxeditor): ref #7849: add correct handling for restoreDefaults in DB preferen...
Katja Luther
11:50 AM task #7918: Revision of reference type specific properties
for Reference type = PrintSeries see task #8091 Wolf-Henning Kusber
11:09 AM task #7918: Revision of reference type specific properties
Revision of these issues:
Almost all issues are perfectly resolved, in TaxEditor and Vaadin as well.
I propose ...
Wolf-Henning Kusber
11:49 AM task #8091 (In Progress): Discuss Referencetype PrintSeries with respect to user needs of PhycoBa...
Referencetype = PrintSeries
Current status (Vaadin AND TaxEditor)
Example:
Title = Syllabus of plant families
...
Wolf-Henning Kusber
11:34 AM Revision 6b29c7a0 (taxeditor): ref #7998 Add termType to vocabulary selection dialog
Patrick Plitzner
11:28 AM Revision 1184c8e0 (cdmlib): ref #7998 Add service method for UuidAndTitleCache by term type
Patrick Plitzner

02/08/2019

12:30 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> I did not check the ABCD stuf as I am not so familar. Can you please check yourself?
>
>...
Katja Luther
11:41 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Name Details View: "Secundum Ref Details and Secundum activated should have identation to ma...
Katja Luther
10:30 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Also, if no preference exists yet (def...
Katja Luther
07:36 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Also, if no preference exists yet (default) all vocabularies should...
Andreas Müller
07:27 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Also, if no preference exists yet (default) all vocabularies should...
Katja Luther
07:13 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Also, if no preference exists yet (default) all vocabularies should be selected in the selec...
Katja Luther
06:53 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> The predicate "model.editor.NDV" always gets persisted once DB prefs are opened and saved ev...
Katja Luther
06:51 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Critical: Name Details View: changes in DB prefs have no effect. Unselected controls are sti...
Katja Luther
06:51 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> After trying to set values to default values I could not open the preference page anymore:
...
Katja Luther
05:50 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
I did not check the ABCD stuf as I am not so familar. Can you please check yourself?
Only minor issues:
* Nom...
Andreas Müller
05:37 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Critical: Name Details View: changes in DB prefs have no effect. Unselected controls are still shown in the view. Andreas Müller
05:36 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Name Details View: "Secundum Ref Details and Secundum activated should have identation to make clear that they belong... Andreas Müller
05:29 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Name Details View: by default when switching to "simplified" only NameCache, AuthorCache and Approbation is selected.... Andreas Müller
05:23 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Nomenclatural Code: Changing allow override does not set "Apply" to enabled. Andreas Müller
05:21 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
The predicate "model.editor.NDV" always gets persisted once DB prefs are opened and saved even if NDV page was not op... Andreas Müller
05:18 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Common name areas: when opening the dialog it is always empty but should show the vocabulari...
Katja Luther
05:16 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
The "Restore Default" generally does not seem to work for DB Prefs. We should either disable/remove it or make it wor... Andreas Müller
05:10 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Also for common names there is "Allow override" in the dialog and on the page. Preferred is on the page, but definete... Andreas Müller
05:09 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Also, if no preference exists yet (default) all vocabularies should be selected in the selection dialog as this is si... Andreas Müller
05:04 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Also it is not possible to delete this preference by setting it to default. If no vocabulary is selected an empty str... Andreas Müller
04:58 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Common name areas: when opening the dialog it is always empty but should show the vocabulari...
Andreas Müller
04:41 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Common name areas: when opening the dialog it is always empty but should show the vocabularies selected before Andreas Müller
04:36 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
This seems to be the reason:
~~~
java.lang.NullPointerException
at eu.etaxonomy.taxeditor.preference.ChecklistE...
Andreas Müller
04:25 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Again I get "The currently displayed page contains invalid values" for a DB with no DBprefs defined and also no local... Andreas Müller
04:24 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
The above is fixed with commits ed86aee4 ff but still should be reviewed by KL. Andreas Müller
01:07 PM bug #7849 (Feedback): Improve DB Preferences handling and saving in TaxEditor
After trying to set values to default values I could not open the preference page anymore:
~~~
login : admin
edi...
Andreas Müller
10:22 AM bug #7849 (Resolved): Improve DB Preferences handling and saving in TaxEditor
note-42 and note-43 are implemented, so I set the ticket to resolved. Katja Luther
12:30 AM feature request #8089 (New): improve abcd preference page
copied from #7849:
* Nomenclatural Code is missing a label there.
* The "New Provider" field is missing a l...
Katja Luther
12:26 AM Revision ba924c16 (taxeditor): ref #7849: fix problems with nomenclatural code preference continue
Katja Luther
12:07 AM Revision 00e51d7a (taxeditor): ref #7849: fix problems with nomenclatural code preference
Katja Luther
11:47 PM Revision 88785766 (taxeditor): ref #7849: nomenclatural code change allowOverride -> apply activated
Katja Luther
11:41 PM Revision d9ff01e1 (taxeditor): ref #7849: identation for sec preferences
Katja Luther
11:09 PM Revision 852ab2c5 (taxeditor): ref #7849: add message to term selection wizard that no selection ...
Katja Luther
07:54 PM Revision 44bc51cb (taxeditor): minor
Katja Luther
07:26 PM Revision fab52cf2 (taxeditor): ref #7849: check all voc if no pref exist
Katja Luther
07:01 PM feature request #7408 (New): [E+M] Support for preferred common names in data portal
Upps, I just see that I did not give this back to you. It is an important ticket for E+M. Andreas Müller
06:59 PM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Patrick Plitzner wrote:
> > > Andreas Müller wrote:
> > > > I...
Andreas Müller
06:56 PM feature request #6805 (Feedback): Implement drag and drop from Term Editor (Feature) to FeatureTr...
Now I get an error dialog "The connection to the server could not be established because the access was denied". This... Andreas Müller
12:06 PM feature request #6805 (Resolved): Implement drag and drop from Term Editor (Feature) to FeatureTr...
Andreas Müller wrote:
> When d&d a feature to a certain position now from term editor it is added to the end, not at...
Patrick Plitzner
11:32 AM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > I only wonder if we need a dialog ...
Patrick Plitzner
06:50 PM Revision cec27740 (taxeditor): ref #7849: fix problems with preferences
Katja Luther
06:48 PM bug #7856 (Closed): Allow local override for distribution vocabularies
Ok, I am not that deep into the code that I could really decide what the best is. I think we can close this ticket. G... Andreas Müller
12:53 PM bug #7856 (Resolved): Allow local override for distribution vocabularies
I keep it like it was implemented: when the string is null, the default value is used. Katja Luther
06:42 PM feature request #8062 (In Progress): Make default preferences deletable serverside
Andreas Müller
06:42 PM feature request #8062: Make default preferences deletable serverside
The first implementation seems to work for all server side preferences using PreferencePredicates. This is only a fir... Andreas Müller
06:36 PM bug #7794 (Closed): Update TaxonNodeWizard
I moved all open issues to new ticket #8088 Andreas Müller
06:33 PM bug #8088 (Feedback): Open taxon node wizard issues
Urgent: reenable taxon selection for reusing taxa (see #8088#note-3) => hotfix 5.5.1
Copied from #7794
* Classi...
Andreas Müller
05:50 PM task #8087 (New): improve response model of registration/identifier/{registrationID}/status.json ...
web service implemented for #7927 (commit:ebbad31)
response model currently:
~~~json
{
"String": "PUBLISH...
Andreas Kohlbecker
05:23 PM feature request #8086 (New): registration submission endpoint implemented
An REST service endpoint which receives initial submissions (POST) and updates (PUT).
The service receives data su...
Andreas Kohlbecker
05:17 PM Revision b7544987 (taxeditor): ref #7849: fix correct saving in common name area selection
Katja Luther
05:02 PM Revision 693c1847 (taxeditor): ref 7849: create new pref if not exist for nomcl code
Katja Luther
04:02 PM bug #7998 (Feedback): Store newly created Characters in selected vocabulary
Sorry as the comment list is long already I forgot to check the most important issue again which is mentioned in #799... Andreas Müller
03:37 PM bug #7998 (Closed): Store newly created Characters in selected vocabulary
Patrick Plitzner
03:36 PM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Andreas Müller wrote:
> > > > The...
Patrick Plitzner
03:19 PM bug #7998 (Feedback): Store newly created Characters in selected vocabulary
The primary task he has been fixed, all open issues are minor as can be solved later, so if you want we can close thi... Andreas Müller
03:17 PM bug #7998: Store newly created Characters in selected vocabulary
As mentioned before(?) I would put the character selection input more to the character part of the UI not to the top ... Andreas Müller
03:14 PM bug #7998: Store newly created Characters in selected vocabulary
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > The text field is writable but sho...
Andreas Müller
03:12 PM bug #7998: Store newly created Characters in selected vocabulary
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Patrick Plitzner wrote:
> > > Andreas Müller wrote:
> > > > N...
Andreas Müller
12:25 PM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > > Also we may want to increase the dialog a bit to make all dat...
Patrick Plitzner
12:21 PM bug #7998 (Resolved): Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Now, if you create a new vocabular...
Patrick Plitzner
03:36 PM Revision 132209be (taxeditor): ref #7998 Set feature tree text field to editable=false
Patrick Plitzner
03:35 PM bug #6159 (Closed): improve distribution editor in TaxEditor
I moved performance check for large datasets to #8047.
All other issues seem to be fixed or irrelevant since Distr...
Andreas Müller
03:28 PM feature request #7912 (Closed): Enhance checkbox tree viewer
Added remaining issues to #8054 Patrick Plitzner
01:54 PM Revision bf95f6e9 (cdmlib): ref #7849 make byKey() static
Andreas Müller
01:48 PM Revision a61a689d (cdm-server): updating docker image documentation
Andreas Kohlbecker
01:32 PM Revision 724c93bd (taxeditor): ref #7849 use TermDisplayEnum.byKey()
Andreas Müller
01:28 PM Revision ed86aee4 (cdmlib): ref #7849 add byKey() to TermDisplayEnum
Andreas Müller
12:20 PM Revision 5710b5c7 (taxeditor): ref #7998 Set label for new vocabularies to null in new voc wizards
- check page completeness via label==null Patrick Plitzner
12:06 PM Revision aa56d121 (cdmlib): ref #6805 Add position parameter to service method for adding child node
Patrick Plitzner
12:03 PM Revision 353ce96b (taxeditor): ref #6805 Fix DnD positioning when moving and adding new terms
Patrick Plitzner
11:40 AM Revision b8e81b51 (taxeditor): minor
Katja Luther
11:35 AM Revision 8e2b7726 (taxeditor): fix NameEditorPropertyTester for accepted names which are also inc...
Katja Luther
11:33 AM feature request #8082 (New): cdm-server docker image allows running the cdm-server as non root user
The cdmserver docker image sould accept a ENV variable `USER=${username}` to define the user under which the java pro... Andreas Kohlbecker
11:11 AM task #8081 (New): Complete removal of redmine communication hub instances
As decided in #7935 we are dropping the communication infrastructure build on base of redmine.
Once all code has ...
Andreas Kohlbecker
11:11 AM Revision 1718abec (taxeditor): Add initial check for TaxonBase to property tester
Patrick Plitzner
11:02 AM Revision d78bb89a (taxeditor): minor in name editor
Katja Luther
11:00 AM Revision a1cca9f8 (taxeditor): Set selection when setting focus to name editor
Patrick Plitzner
10:14 AM bug #6952 (In Progress): Deleting terms does not get reflected in the UI and in the DB
I will do that in the next release Katja Luther
09:51 AM Revision d0efb0d8 (taxeditor): fix finish and open of newTaxonnodewizard
Katja Luther
09:48 AM feature request #8080: Improve menu item/tooltip text for "Open in bulk editor" when opening Iden...
For taxa we should always have the possibility to open in both bulk editors: taxon bulk editor and name bulk editor (... Andreas Müller
09:42 AM feature request #8080 (New): Improve menu item/tooltip text for "Open in bulk editor" when openin...
Currently, we use a generic command and handler to open IdentifiableEntities in th bulk editor. This way it is not po... Patrick Plitzner
09:27 AM Revision 53b6740f (taxeditor): fix redraw of misapplied group in name editor
Katja Luther

02/07/2019

10:49 PM Revision f18400be (taxeditor): fix correct focus and selection after changing from synonym to MAN
Katja Luther
10:21 PM bug #8073 (Closed): Registration page: show typified name for registrations covering typification...
Andreas Kohlbecker
06:14 PM bug #8073: Registration page: show typified name for registrations covering typifications only
A good and clear solution, thank you. Ticket can be closed. Wolf-Henning Kusber
10:58 AM bug #8073: Registration page: show typified name for registrations covering typifications only
please review for example at http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration/http%... Andreas Kohlbecker
10:57 AM bug #8073 (Resolved): Registration page: show typified name for registrations covering typificati...
Applied in changeset commit:cdm-dataportal|2dce3b2a6df41b34dbf7fa800b76604c223ff9e8. Andreas Kohlbecker
10:44 AM bug #8073 (Closed): Registration page: show typified name for registrations covering typification...
1. show the typified name below the types section in grey and prefix it with "for "
2. adapt selenium test
Andreas Kohlbecker
10:21 PM bug #8063 (Closed): multiple representations problem wirth collector being author of the registra...
Andreas Kohlbecker
06:44 PM bug #8063: multiple representations problem wirth collector being author of the registration cita...
Checked with an analogous new example without any exception. Ticket can be closed. Wolf-Henning Kusber
10:21 PM feature request #7978 (Closed): registration search result ordered by identifier descending
Andreas Kohlbecker
06:47 PM feature request #7978: registration search result ordered by identifier descending
Issue fully resolved. Ticket can be closed. Wolf-Henning Kusber
10:20 PM bug #7481 (Closed): ReferenceEditor: filter inReferences by applicable reference type
Andreas Kohlbecker
07:08 PM bug #7481: ReferenceEditor: filter inReferences by applicable reference type
Section in Booksection is now possible. Ticket can be closed. Wolf-Henning Kusber
08:15 PM Revision 602aaca7 (taxeditor): invalid designation externalization
Katja Luther
07:53 PM Revision 7ebbf765 (taxeditor): label issues continue
Katja Luther
07:53 PM Revision 9dbc8485 (taxeditor): label issues
Katja Luther
07:53 PM Revision 6cd56d5e (taxeditor): move term editor pref to ui
Katja Luther
07:33 PM feature request #7902: Allow default values for PreferencePredicates
As this is implemented on TaxEditor side I take it back to me for remaining issues. Andreas Müller
06:44 PM bug #7998: Store newly created Characters in selected vocabulary
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, if you create a new vocabulary via "New Vocabulary" the de...
Andreas Müller
06:41 PM bug #7998 (Feedback): Store newly created Characters in selected vocabulary
Patrick Plitzner wrote:
> > Also we may want to increase the dialog a bit to make all data available without scrolli...
Andreas Müller
12:14 PM bug #7998 (Resolved): Store newly created Characters in selected vocabulary
> Also we may want to increase the dialog a bit to make all data available without scrolling. At least on Windows it ... Patrick Plitzner
11:42 AM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> Now, if you create a new vocabulary via "New Vocabulary" the default label is "empty represe...
Patrick Plitzner
11:31 AM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> Andreas Müller wrote:
> > The text field is writable but shouldn't. Selection is done only ...
Patrick Plitzner
06:37 PM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > I only wonder if we need a dialog saying this is not possible. ...
Andreas Müller
06:36 PM feature request #6805 (Feedback): Implement drag and drop from Term Editor (Feature) to FeatureTr...
When d&d a feature to a certain position now from term editor it is added to the end, not at the correct position. D&... Andreas Müller
02:26 PM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Andreas Müller wrote:
> I only wonder if we need a dialog saying this is not possible. Can't we do the check on the ...
Patrick Plitzner
01:36 PM feature request #6805 (Resolved): Implement drag and drop from Term Editor (Feature) to FeatureTr...
Andreas Müller
06:29 PM feature request #7761 (Closed): Invalid designations should be displayed like misapplied names in...
There are still some related issues open (discussed via email). However, they are not inval. desig. specific and ther... Andreas Müller
12:02 PM feature request #7761 (Resolved): Invalid designations should be displayed like misapplied names ...
Andreas Müller
11:00 AM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > It would be nice to have a separate ic...
Katja Luther
06:08 PM bug #8041 (Closed): PatternSyntaxException in FeatureTreeSelectionDialog
Also the related issue seem to be fixed all. I think we can close this ticket. Andreas Müller
12:15 PM bug #8041 (Resolved): PatternSyntaxException in FeatureTreeSelectionDialog
Already done ;) Patrick Plitzner
12:01 PM bug #8041 (Feedback): PatternSyntaxException in FeatureTreeSelectionDialog
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Also the New Group dialog does not allow to enter a group name....
Andreas Müller
11:07 AM bug #8041 (Resolved): PatternSyntaxException in FeatureTreeSelectionDialog
Andreas Müller wrote:
> There is a related issue. When creating a new Feature Tree in FeatureTree selection dialog "...
Patrick Plitzner
09:55 AM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
Andreas Müller wrote:
> Also the New Group dialog does not allow to enter a group name. The dialog is empty.
> Also...
Patrick Plitzner
09:53 AM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
Andreas Müller wrote:
> they all work as expected. I did not find any place where FeatureSelectionDialog is used. ...
Patrick Plitzner
05:52 PM Revision bc72f4e6 (taxeditor): Handle null selection in property tester
Patrick Plitzner
05:31 PM Revision 10ba3d8e (taxeditor): Adjust "Open in..." text
Patrick Plitzner
05:30 PM Revision 4964c035 (taxeditor): Adjust "Open in..." text
Patrick Plitzner
05:13 PM Revision 0d41d8b1 (taxeditor): remove namedescription part from creatdescriptionhandler
Katja Luther
04:35 PM Revision 3c2c16c0 (cdmlib): ref #8062: add editorPreferencePredicates to PreferencePredicates and...
Katja Luther
03:20 PM Revision 0504b50c (cdmlib): ref #8062 fix NPE in TaxonGraphTest
Andreas Müller
03:09 PM Revision 9b8d1a1c (taxeditor): ref #8078: move editorPreferencePredicates to cdmlib
Katja Luther
02:26 PM feature request #8078 (New): Improve DnD behavior
* Test dropping several different items (CDM object, external object like files, etc.) into every viewer with DnD
* ...
Patrick Plitzner
02:14 PM Revision 3eecdd85 (cdmlib): ref #8062 first implementation to delete default preferences (only fo...
Andreas Müller
01:41 PM bug #8077 (New): recursive call of errorDialog.open caused by an SWTException
this is a follow up ticket of #7668.
~~~ text
login : s.vonmering
editor version : 5.2.0
server : api.cyberta...
Katja Luther
01:39 PM bug #7668 (Closed): NPE when changing author
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > this.taxon != null && this.taxon.getNa...
Katja Luther
01:31 PM bug #7668: NPE when changing author
Katja Luther wrote:
> Andreas Müller wrote:
> > this.taxon != null && this.taxon.getName().equals(cdmbase) should i...
Andreas Müller
01:21 PM bug #7668: NPE when changing author
Andreas Müller wrote:
> this.taxon != null && this.taxon.getName().equals(cdmbase) should include an additional this...
Katja Luther
01:35 PM bug #6952: Deleting terms does not get reflected in the UI and in the DB
Katja, could you have a look on the delete issue as you have the most experience with delete handling. Andreas Müller
01:29 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> I would expect if DB pref distribution status is set with allow override and local prefs are...
Katja Luther
01:16 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > now for specimen, name details and distribution editor the details ...
Katja Luther
01:29 PM Revision e5b6bb85 (taxeditor): ref #7849: show db preference for status and area vocabularies if ...
Katja Luther
01:04 PM Revision c50a3625 (taxeditor): ref #7849: correct enabling/disabling of override buttons
Katja Luther
12:58 PM Revision c19afb7e (taxeditor): Fix ID in Vocabulary string
Andreas Müller
12:51 PM task #7854 (Closed): Open issues in TaxDistributionEditor
Ok, this now works. I add some minor issues for the "Source" buttons to the follow up ticket #8047. Andreas Müller
12:48 PM Revision 5e0ba208 (taxeditor): adapt enable/disable sec part in name details config
Katja Luther
12:42 PM Revision 17235d45 (taxeditor): only save admin prefs when it is edited
Katja Luther
12:36 PM feature request #8076 (Closed): implement test for typified name for registration page
Andreas Kohlbecker
12:36 PM feature request #8076 (Resolved): implement test for typified name for registration page
Applied in changeset commit:cdm-dataportal|73703e189d61c3c5220e87f8b168d654bef08170. Andreas Kohlbecker
12:25 PM feature request #8076 (Closed): implement test for typified name for registration page
Andreas Kohlbecker
12:36 PM Revision 73703e18 (cdm-dataportal): fix #8076 typified name test for registration page implemented
Andreas Kohlbecker
12:29 PM Revision bc9ee333 (taxeditor): revert store/fragment.e4xmi changes
Katja Luther
12:14 PM Revision e01c7145 (taxeditor): ref #7998 Enlarge vertical size of "new" wizard pages
Patrick Plitzner
12:13 PM Revision f360ac5e (taxeditor): minor
Katja Luther
11:20 AM bug #8075 (Closed): multiple cascase all-delete-orphan exceptions related to DefinedTermBase.repr...
In the Registration UI there are a couple of `
org.hibernate.HibernateException: A collection with cascade="all-dele...
Andreas Kohlbecker
11:14 AM Revision bdd76634 (taxeditor): Rename vocabulary wizard
Patrick Plitzner
11:11 AM Revision 692d47bc (taxeditor): ref #7998 Set voc text field to editable=false, allowing text select
Patrick Plitzner
11:07 AM Revision a0dd030b (taxeditor): ref #8041 Store protected flag when creating a new feature tree
Patrick Plitzner
11:02 AM bug #8074 (Closed): Registration page has fatal error when registration identifier in url path is...
Andreas Kohlbecker
11:02 AM bug #8074 (Resolved): Registration page has fatal error when registration identifier in url path ...
Applied in changeset commit:cdm-dataportal|e42db5b0b1abd1109644539a2f35434fd8af2805. Andreas Kohlbecker
10:50 AM bug #8074 (Closed): Registration page has fatal error when registration identifier in url path is...
The registration page needs to handle invalid registration identifiers passed via the url to show a notification to t... Andreas Kohlbecker
11:02 AM Revision e42db5b0 (cdm-dataportal): fix #8074 fixing registration page broken due to invalid iden...
Andreas Kohlbecker
10:57 AM Revision 2dce3b2a (cdm-dataportal): fix #8073 showing typified name for registrations covering t...
Andreas Kohlbecker
10:56 AM Revision ab6d5b47 (taxeditor): red icon for invalid designations
Katja Luther
10:56 AM Revision f374e40f (taxeditor): minor
Katja Luther
10:56 AM Revision d08033df (taxeditor): label issues
Katja Luther
10:37 AM Revision ddbbdb0b (cdm-dataportal): ref #7599: exclude collection string from specimen tree view
Katja Luther
10:25 AM Revision 6ad4af7d (cdm-vaadin): ref #8072 better null value handling in BadgeButton and cleaning...
Andreas Kohlbecker
10:09 AM bug #8072 (Closed): Registration items in list view is using the wrong button icons for blocking ...
Andreas Kohlbecker
10:08 AM bug #8072 (Resolved): Registration items in list view is using the wrong button icons for blockin...
Applied in changeset commit:cdm-vaadin|1b3f0d8ced2179d187717eeeab1b9e69b2a21dc4. Andreas Kohlbecker
09:30 AM bug #8072 (Closed): Registration items in list view is using the wrong button icons for blocking ...
List view:
![](picture266-1.png)
this should be harmonized with the RegistrationWorkinsetEditor where the corre...
Andreas Kohlbecker
10:08 AM Revision 1b3f0d8c (cdm-vaadin): fix #8072 introducing component BadgeButton and harmonizing the b...
Andreas Kohlbecker
09:58 AM Revision 43337563 (taxeditor): ref #8041 Remove "New" option for groups and user selection dialog
Patrick Plitzner
09:56 AM bug #8069 (Closed): RegistrationUI: remove all messaging related code and message indicators from...
Andreas Kohlbecker
09:38 AM bug #8069 (Resolved): RegistrationUI: remove all messaging related code and message indicators fr...
Applied in changeset commit:cdm-vaadin|150c262407e0187fe037abea87cb0d8e56b1f03c. Andreas Kohlbecker
09:55 AM Revision 3cd2acfa (taxeditor): minor
Katja Luther
09:39 AM Revision e734a4fb (cdmlib): ref #8069 renaming messages to validation problems
Andreas Kohlbecker
09:38 AM Revision 150c2624 (cdm-vaadin): fix #8069 removing all message hub related code from the Registra...
- Buttons
- Views & Components
- Spring configuration
Andreas Kohlbecker

02/06/2019

11:21 PM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
Katja Luther wrote:
> Andreas Müller wrote:
> > It would be nice to have a separate icon. MA stands for Misapplicat...
Andreas Müller
11:19 PM feature request #7761 (Feedback): Invalid designations should be displayed like misapplied names ...
yes, probably we can close this. Correct formatting will be done in #8055 Andreas Müller
10:54 PM bug #7668 (Feedback): NPE when changing author
Also I wonder why " öffneten sich ganz viele Fehlerfenster". Has this to do with some kind of recursion? Can this be ... Andreas Müller
10:51 PM bug #7668: NPE when changing author
this.taxon != null && this.taxon.getName().equals(cdmbase) should include an additional this.taxon.getName() != null ... Andreas Müller
10:42 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
I think everything else is fixed. Open issues note-33 (maybe needs discussion) and note-42 and note-43 Andreas Müller
10:06 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Katja Luther wrote:
> now for specimen, name details and distribution editor the details are only disabled not invis...
Andreas Müller
09:57 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
I would expect if DB pref distribution status is set with allow override and local prefs are not yet set that when op... Andreas Müller
03:10 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
now for specimen, name details and distribution editor the details are only disabled not invisible when the more glob... Katja Luther
02:38 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Distribution Editor page local prefs: "override" is missing in distribution status selection...
Katja Luther
02:31 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Distribution Editor page: "Show rank in..." and "Sort areas by order ..." are local enabled ...
Katja Luther
12:54 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Distribution Editor page local prefs: "override" is missing in distribution status selection, seems to be correct in ... Andreas Müller
12:53 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Distribution Editor page: "Show rank in..." and "Sort areas by order ..." are local enabled even if allow override is... Andreas Müller
12:48 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> On Specimen page, when "Show specimen related views" is unchecked but allow override = true ...
Andreas Müller
12:42 PM bug #7849 (Feedback): Improve DB Preferences handling and saving in TaxEditor
On Specimen page, when "Show specimen related views" is unchecked but allow override = true the specific preferences ... Andreas Müller
09:11 PM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
I tested
FeatureTreeSelectionDialog
TermVocabularySelectionDialog
GrantedAuthoritySelectionDialog
GroupSelectio...
Andreas Müller
09:08 PM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
Also the New Group dialog does not allow to enter a group name. The dialog is empty.
Also in New User dialog it is n...
Andreas Müller
08:46 PM bug #8041 (Feedback): PatternSyntaxException in FeatureTreeSelectionDialog
There is a related issue. When creating a new Feature Tree in FeatureTree selection dialog "New Feature Tree" the cre... Andreas Müller
01:18 PM bug #8041 (Resolved): PatternSyntaxException in FeatureTreeSelectionDialog
I tested all changed selection dialogs and experienced no exceptions. Patrick Plitzner
01:13 PM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
I changed the callService() method for
* FeatureSelectionDialog
* FeatureTreeSelectionDialog
* TermVoc...
Patrick Plitzner
12:47 PM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
The classes that do not directly invoke a service method with the search pattern are:
* FeatureSelectionDialog -> ...
Patrick Plitzner
07:32 PM feature request #7920: Possibility to define area specific status selection
Andreas Kohlbecker wrote:
> Is this feature request really only specific to the taxeditor?
>
> To me it sounds l...
Andreas Müller
11:52 AM feature request #7920: Possibility to define area specific status selection
Is this feature request really only specific to the taxeditor?
To me it sounds like a preference for a project in...
Andreas Kohlbecker
06:33 PM bug #8069 (In Progress): RegistrationUI: remove all messaging related code and message indicators...
Andreas Kohlbecker
03:10 PM bug #8069 (Closed): RegistrationUI: remove all messaging related code and message indicators from...
The message indicators are no longer needed since we decided not to use any special messaging system but to rely on e... Andreas Kohlbecker
06:24 PM bug #8071 (Closed): ReferencePopupEditor: saving a newly created inreference is not refreshing th...
Andreas Kohlbecker
06:24 PM bug #8071 (Resolved): ReferencePopupEditor: saving a newly created inreference is not refreshing ...
Applied in changeset commit:cdm-vaadin|8f035267e2a1b848dfd7902e20c0af8e3258d26e. Andreas Kohlbecker
06:18 PM bug #8071 (In Progress): ReferencePopupEditor: saving a newly created inreference is not refreshi...
Andreas Kohlbecker
03:22 PM bug #8071 (Closed): ReferencePopupEditor: saving a newly created inreference is not refreshing th...
Andreas Kohlbecker
06:24 PM Revision 8f035267 (cdm-vaadin): fix #8071 setting newly created inReference as value for inRefere...
Andreas Kohlbecker
06:17 PM feature request #8070 (Closed): ReferencePopupEditor: apply sensible reference type pre-set for i...
Andreas Kohlbecker
06:17 PM feature request #8070 (Resolved): ReferencePopupEditor: apply sensible reference type pre-set for...
Applied in changeset commit:cdm-vaadin|5abdc0164b652ca89b2efa69f7952fbbd18aea4a. Andreas Kohlbecker
03:21 PM feature request #8070 (Closed): ReferencePopupEditor: apply sensible reference type pre-set for i...
when clicking the new button in the reference editor the poup editor for the in reference should have the valid refer... Andreas Kohlbecker
06:17 PM Revision 5abdc016 (cdm-vaadin): fix #8070 ReferenceEditor: reference type constraints for inrefer...
Andreas Kohlbecker
03:37 PM Revision 19633083 (taxeditor): smaller issues in preferences part
Katja Luther
03:17 PM bug #7856: Allow local override for distribution vocabularies
No the exception is not caught as long as I can see. But maybe we should handle it the same. Then it is consistent to... Katja Luther
12:09 PM bug #7856: Allow local override for distribution vocabularies
But doesn't Assert throw an exception if one of them is null? This is something else then nothing. Or is the exceptio... Andreas Müller
11:52 AM bug #7856: Allow local override for distribution vocabularies
I also had a look how it is handled in eclipse preferenceStore and there a null value is handled like nothing. So not... Katja Luther
11:10 AM bug #7856: Allow local override for distribution vocabularies
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Katja Luther wrote:
> > > > Andreas M...
Katja Luther
11:08 AM bug #7856 (Feedback): Allow local override for distribution vocabularies
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > But what ...
Andreas Müller
10:55 AM bug #7856: Allow local override for distribution vocabularies
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > But what if the value is null for some...
Katja Luther
10:46 AM bug #7856: Allow local override for distribution vocabularies
Katja Luther wrote:
> Andreas Müller wrote:
> > But what if the value is null for some reason. Can this happen? Sho...
Andreas Müller
03:12 PM Revision d4876d34 (taxeditor): add missing enum
Katja Luther
03:09 PM Revision b5f2ab89 (taxeditor): ref #7849: do not set details part of specimen pref page invisible
Katja Luther
02:56 PM bug #8065: HibernateException: corrupt session problem breaks SpecimenTypeDesignationworkingsetEd...
This seems not to be related to the session time out as assumed originally Andreas Kohlbecker
02:54 PM feature request #8048 (Closed): Selenium test for Registration page
Tests implemented and SUCCESSful Andreas Kohlbecker
02:53 PM bug #8068 (New): Selenium test for Reference page
Test for:
* nomeclatural acts
* #7907
Andreas Kohlbecker
02:48 PM bug #8066 (Closed): CdmUserHelper.createAuthorityFor() causes flush of pending transactions
Andreas Kohlbecker
01:10 PM bug #8066 (Resolved): CdmUserHelper.createAuthorityFor() causes flush of pending transactions
Applied in changeset commit:cdmlib|4c2a3c2cc8e7583d613dd5e24afc5fdda3442816. Andreas Kohlbecker
01:09 PM bug #8066: CdmUserHelper.createAuthorityFor() causes flush of pending transactions
Using the PROPAGATION_REQUIRES_NEW turned out to be in-appropriate. It was causing LazyInitializationExceptions, the ... Andreas Kohlbecker
12:37 PM bug #8066: CdmUserHelper.createAuthorityFor() causes flush of pending transactions
A forced flush before changing the authentication should help in this case. Other options are to
* do the authori...
Andreas Kohlbecker
12:32 PM bug #8066 (Closed): CdmUserHelper.createAuthorityFor() causes flush of pending transactions
This was observed when testing for regressions related to #8039, the following steps where done in the registration U... Andreas Kohlbecker
02:40 PM Revision 095edb04 (cdm-dataportal): ref #8048 enabling RegistrationTest and updating assertions t...
Andreas Kohlbecker
02:38 PM Revision faa0d5c5 (taxeditor): ref #7849: add missing override button to status selection
Katja Luther
02:23 PM Revision 61240256 (taxeditor): ref #7854: continue order of columns in distribution editor
Katja Luther
02:06 PM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Disallow dropping feature nodes above/below feature trees Patrick Plitzner
02:06 PM Revision ae2066bc (taxeditor): ref #6805 Disallow dropping feature nodes above/below feature trees
Patrick Plitzner
02:02 PM Revision 8db3ccd6 (taxeditor): ref #7849: correct enabling of local prefs with no allowOverride a...
Katja Luther
01:23 PM feature request #7887 (Closed): Use DTOs in term editor
Andreas Müller wrote:
> Are there still open issues that need to be handled in separate tickets? I remember you said...
Patrick Plitzner
01:21 PM feature request #8067 (New): Remove immediate saving after operations from term editor
Copied from #7887
The term editor should behave like the other editors and have long running sessions.
So that ...
Patrick Plitzner
01:17 PM Revision f4935f27 (taxeditor): ref #8041 Use CdmUtils.quoteRegExWithWildcard(pattern) for search ...
Patrick Plitzner
01:10 PM Revision 4c2a3c2c (cdmlib): fix #8066 doing a forced flush before changing the authentication
Andreas Kohlbecker
01:09 PM Revision d50317d6 (taxeditor): ref #8041 Use existing service method for retrieval of UuidAndTitl...
Patrick Plitzner
11:43 AM Revision 88672879 (taxeditor): ref #7854: use preferred terms for PA terms if none are selected f...
Katja Luther
11:20 AM Revision 2751cefc (cdm-vaadin): ref #8039 preserving un-persisted registrations only when not per...
Andreas Kohlbecker
11:10 AM bug #8063: multiple representations problem wirth collector being author of the registration cita...
Should be fully solved but a second checking this would be great.
Please review once the server is updated.
Andreas Kohlbecker
11:09 AM bug #8063 (Resolved): multiple representations problem wirth collector being author of the regist...
Applied in changeset commit:cdm-vaadin|fdce845e68f179442cec658779f8c8e5319d2ee7. Andreas Kohlbecker
11:08 AM Revision fdce845e (cdm-vaadin): fix #8063 avoiding multiple representations problem by adding the...
Andreas Kohlbecker
10:49 AM Revision b512f232 (taxeditor): ref #7854: string externalization
Katja Luther
10:43 AM task #7854 (Resolved): Open issues in TaxDistributionEditor
Andreas Müller
10:14 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Not all of them are moved. Some are still open here
>
> note-73 last question
if the a...
Katja Luther
10:42 AM feature request #7283 (Resolved): Improvements for alternative identifier search
Andreas Müller
10:30 AM feature request #7283: Improvements for alternative identifier search
Andreas Müller wrote:
> Do I understand correctly that this functionality is only available for certain references s...
Katja Luther
10:11 AM Revision 3d620eb4 (taxeditor): ref #7854: button for removing default source
Katja Luther
09:55 AM Revision f6353ba0 (taxeditor): ref #7854: label of default source
Katja Luther
09:54 AM Revision 525bc165 (taxeditor): add identifier and titlecache to nomenclatural reference seaarch d...
Katja Luther

02/05/2019

05:18 PM Revision aac3a77c (cdm-dataportal): ref #8048 ignoring RegistrationTest class for now - 2.
Andreas Kohlbecker
05:17 PM Revision 87666c59 (cdm-dataportal): ref #8048 ignoring RegistrationTest class for now - fixes las...
Andreas Kohlbecker
05:11 PM Revision 894fc85e (cdm-dataportal): ref #8048 ignoring test class for now
Andreas Kohlbecker
05:00 PM Revision 08dde2eb (cdm-dataportal): ref #8048 implementing page object, element objects & tests f...
Andreas Kohlbecker
04:46 PM Revision e1e2d593 (cdm-dataportal): proper initialization of variable
Andreas Kohlbecker
04:46 PM Revision 5fdcad30 (cdm-dataportal): ref #7927 showing registration status in drupal message box
Andreas Kohlbecker
03:02 PM bug #8064 (Closed): NPE in AbstractHibernateTaxonGraphProcessor.assureSingleTaxon() on saving new...
Andreas Kohlbecker
01:38 PM bug #8064 (Resolved): NPE in AbstractHibernateTaxonGraphProcessor.assureSingleTaxon() on saving n...
Applied in changeset commit:cdmlib|a53c0e28c0e061f1abf2837042f1a933c7fdba50. Andreas Kohlbecker
01:21 PM bug #8064 (Closed): NPE in AbstractHibernateTaxonGraphProcessor.assureSingleTaxon() on saving new...
This happened while entering the registration data for http://phycobank.org/100474 from scratch
Heidari, F., Zima...
Andreas Kohlbecker
03:02 PM Revision f08b6366 (cdmlib): ref #8064 ref #7648 autocreation of missing default secRef value in c...
Andreas Kohlbecker
02:24 PM Revision 82628937 (taxeditor): adapt term menu label
Katja Luther
02:21 PM bug #8065 (Closed): HibernateException: corrupt session problem breaks SpecimenTypeDesignationwor...
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/c3610379-fbfb-4e97-94d7-74d9aca07c1e
* ...
Andreas Kohlbecker
01:50 PM bug #7454: illegal argument exception for name selection in details view
this exception is caused by a disposed parent (if (parent.isDisposed ()) error (SWT.ERROR_INVALID_ARGUMENT);) when th... Katja Luther
01:39 PM bug #7746 (Closed): NPE when deleting volatile DescriptionBase
this was fixed with #3276 Katja Luther
01:38 PM Revision a53c0e28 (cdmlib): fix #8064 fixing NPE in AbstractHibernateTaxonGraphProcessor.assureSi...
Andreas Kohlbecker
01:32 PM bug #7699: NPE when searching for specimen in bulk editor
the cache is disposed if the cdmEntitySession is closed, for the bulkeditor this is the case when the editor is saved... Katja Luther
12:30 PM feature request #7761 (Resolved): Invalid designations should be displayed like misapplied names ...
Andreas Müller
11:00 AM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
Andreas Müller wrote:
> It would be nice to have a separate icon. MA stands for Misapplication. Can we have somethin...
Katja Luther
12:10 PM bug #7856: Allow local override for distribution vocabularies
Andreas Müller wrote:
> But what if the value is null for some reason. Can this happen? Should we handle this someho...
Katja Luther
11:55 AM bug #7856: Allow local override for distribution vocabularies
But what if the value is null for some reason. Can this happen? Should we handle this somehow (e.g. by converting it ... Andreas Müller
09:52 AM bug #7856 (Closed): Allow local override for distribution vocabularies
Katja Luther
09:52 AM bug #7856 (Feedback): Allow local override for distribution vocabularies
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Now after selecting another vocabulary...
Katja Luther
09:52 AM bug #7856 (Resolved): Allow local override for distribution vocabularies
Applied in changeset commit:taxeditor|0613242bb57a30b9079585585f1af2e24a68cab8. Katja Luther
12:05 PM Revision 5ba8876f (taxeditor): ref #7668: add null check for name
Katja Luther
11:56 AM bug #8063 (Closed): multiple representations problem wirth collector being author of the registra...
This happened while entering the data for http://phycobank.org/100007 from scratch
1. created reference: Jahn, R, ...
Andreas Kohlbecker
11:46 AM Revision b08c4c55 (taxeditor): minor
Katja Luther
11:44 AM bug #7668: NPE when changing author
null check for all potential occurrences of NPE Katja Luther
11:43 AM bug #7668 (Resolved): NPE when changing author
Applied in changeset commit:taxeditor|457199e546b7fbd9f1162b5b81b3d10ba7ec928f. Katja Luther
11:42 AM Revision 457199e5 (taxeditor): fix #7668: fix potential NPE
Katja Luther
11:40 AM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Also have you checked the "Checklist perspective"? I think it is ex...
Andreas Müller
11:36 AM task #7854: Open issues in TaxDistributionEditor
Not all of them are moved. Some are still open here
note-73 last question
note-75
note-77
note-78
note-79 (but...
Andreas Müller
09:47 AM task #7854: Open issues in TaxDistributionEditor
Can we close this ticket, the remaining issues are moved to the follow up ticket, aren't they? Katja Luther
10:58 AM Revision e944f62a (taxeditor): ref #7761: add icon for invalid designation
Katja Luther
09:52 AM Revision 0613242b (taxeditor): fix #7856: fix NPE
Katja Luther
09:43 AM feature request #7993: Display "Access Denied" dialog in case the remoting service responds with ...
the closing of views is implemted now (see last commit). so we do not need a new ticket and close this one Katja Luther
09:35 AM Revision c1ae46ed (taxeditor): fix #7993: close views when switching user and reopen them when us...
Katja Luther

02/04/2019

03:25 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > If default value is selected and allow override = true the preferen...
Andreas Müller
03:22 PM feature request #8062 (In Progress): Make default preferences deletable serverside
Currently when storing a CdmPreference it can not be checked if it holds the default value and therefore can be delet... Andreas Müller
02:29 PM bug #8059 (Closed): NPE when adding existing but un-registered name to workingset
great! Closing this ticket. Andreas Kohlbecker
02:25 PM bug #8059: NPE when adding existing but un-registered name to workingset
Bug is fixed. Navicula can be loaded into Vaadin without any bug report. Wolf-Henning Kusber
12:30 PM bug #8059 (Resolved): NPE when adding existing but un-registered name to workingset
This should be fixed now!
Please review once the testserver is updated.
Andreas Kohlbecker
11:05 AM bug #8059 (Closed): NPE when adding existing but un-registered name to workingset
to reporoduce:
* add "existing name" *Navicula Bory* to workingset `#!workingset/5020d688-0847-48c9-8933-963394ba3...
Andreas Kohlbecker
02:13 PM feature request #7993: Display "Access Denied" dialog in case the remoting service responds with ...
Andreas Müller wrote:
> Seems to work now as expected except for the non emptied views. Can you please link to the n...
Andreas Müller
01:59 PM feature request #7993 (Closed): Display "Access Denied" dialog in case the remoting service respo...
Katja Luther
01:56 PM bug #7856: Allow local override for distribution vocabularies
Andreas Müller wrote:
> Katja Luther wrote:
> > now in admin preferences it is possible to set the distribution edi...
Katja Luther
01:42 PM bug #7856: Allow local override for distribution vocabularies
Except for the minor issues in note-19 and -20 this is fixed now and can be closed. Andreas Müller
01:41 PM bug #7856: Allow local override for distribution vocabularies
Katja Luther wrote:
> Andreas Müller wrote:
> > Now after selecting another vocabulary (without override flag set, ...
Andreas Müller
01:19 PM bug #7856 (Feedback): Allow local override for distribution vocabularies
Katja Luther wrote:
> now in admin preferences it is possible to set the distribution editor preferences even if act...
Andreas Müller
01:55 PM Revision 663a45e5 (taxeditor): ref #7854: fix filter for none status and adapt filter to status d...
Katja Luther
01:33 PM feature request #8061 (New): Prevent user from leaving the RegistrationWorkingsetEditor when regi...
when working on #8039, #8059 it became obvious that it is possible to create a registration and to leave the Registr... Andreas Kohlbecker
01:16 PM Revision a559c7f6 (taxeditor): ref #7854: correct handling when first entry is none-term and add ...
Katja Luther
12:58 PM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Currently dropping is also allowed...
Andreas Müller
12:56 PM feature request #6805 (Feedback): Implement drag and drop from Term Editor (Feature) to FeatureTr...
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > If dropping a feature directly above a vocabulary it is added a...
Andreas Müller
12:34 PM feature request #7063 (Closed): Improve the area selection wizard for distribution editor
Katja Luther wrote:
> I think this is solved with #7887.
>
> Now the items in the tree have three states and it i...
Andreas Müller
12:28 PM Revision 07ac49bc (cdmlib): ref #8059 fixing RegistrationServiceImpl.assureIsPersisted() for situ...
Andreas Kohlbecker
12:28 PM Revision 990ab6b3 (cdm-vaadin): ref #8059 using the cached registration data in case the reg is n...
Andreas Kohlbecker
12:28 PM feature request #7163 (Closed): Restructure preferences

>
~~> Bei der Termauswahl sollte immer das gleiche Label verwendet werden, z.B. "Auswahl der xxx". Derzeit steht ...
Katja Luther
11:57 AM feature request #7163: Restructure preferences
~~Taxon Suche => Taxonsuche~~
~~Unter Namen könnte "Name Details View" zu "Details View" verkürzt werden.~~
~~D...
Katja Luther
11:10 AM feature request #7163: Restructure preferences
After changing the above label issues we can close the ticket. I opened a new ticket with new issues #8058. Andreas Müller
11:09 AM feature request #7163 (Feedback): Restructure preferences
Ein paar weitere Labelfälle (minor)
Taxon Suche => Taxonsuche
Unter Namen könnte "Name Details View" zu "Detail...
Andreas Müller
12:24 PM Revision b5776641 (taxeditor): ref #7163: label issues
Katja Luther
12:17 PM feature request #7887: Use DTOs in term editor
Are there still open issues that need to be handled in separate tickets? I remember you said that vocabularies do not... Andreas Müller
12:13 PM feature request #7887 (Feedback): Use DTOs in term editor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Ordering does not seem to work anymore. I tested with a user de...
Andreas Müller
12:06 PM bug #7998: Store newly created Characters in selected vocabulary
Now, if you create a new vocabulary via "New Vocabulary" the default label is "empty representation". Is this necessa... Andreas Müller
12:02 PM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> The text field is writable but shouldn't. Selection is done only via selection dialog. Shoul...
Andreas Müller
11:55 AM bug #7998 (Feedback): Store newly created Characters in selected vocabulary
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > I wonder if we should not have a TermType "Character". Currentl...
Andreas Müller
11:35 AM feature request #7923: Add context menu and drag'n'drop to CharacterEditor
As I am not 100% sure about the content of this ticket I will review Character editor once it is suggested for not be... Andreas Müller
11:26 AM feature request #6806 (Closed): Add context menu to FeatureTreeEditor
Andreas Müller wrote:
> Having a move up/down in right click menu would be a nice nice-to-have as d&d is sometimes a...
Andreas Müller
11:25 AM feature request #8060 (New): Implement move up/down in feature tree editor
copied from #6806#note-24
"Having a move up/down in right click menu would be a nice nice-to-have as d&d is someti...
Andreas Müller
11:03 AM feature request #8058 (Feedback): Further issues for (local) preferences
* Distinguish i18n languages and common name languages (the languages used for common names and those for translation... Andreas Müller
10:15 AM Revision 886ba3e2 (cdmlib): ref #3767 ref #3572 some more tests for DOI parsing
Andreas Müller
08:41 AM bug #8056 (Closed): WSOD in cdm_dataportal/search/results/taxon
Yes, exactly, there is no way of catching and handling this error so that the page is being displayed at least in a l... Andreas Kohlbecker
08:41 AM task #8057 (New): Upgrade to debian 10
All servers running the dataportal need to be upgraded to debian 10 to prevent from problems like #8056
These are:
...
Andreas Kohlbecker
02:10 AM Revision 425411f4 (cdmlib): ref #3767 ref #3572 add prefix parsing without http to DOI
Andreas Müller

02/03/2019

01:50 PM bug #8056 (Feedback): WSOD in cdm_dataportal/search/results/taxon
Hi asked Greece admins to fix the image.
Do I understand it correctly that it is not possible with the current lib...
Andreas Müller

02/02/2019

12:05 PM Revision e7f70a37 (taxeditor): ref #7761: don't allow editing type of relationship for InvalidTyp...
Katja Luther
12:02 PM Revision f85602e8 (taxeditor): fix NPE in factual data view
Katja Luther
11:59 AM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
Andreas Müller wrote:
> The formatting is according to MAN now, with name author being "NON" author in the second ro...
Katja Luther
11:55 AM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
Andreas Müller wrote:
> Relationship type in details view allows all relationship types now in dropdown. As long as ...
Katja Luther
10:15 AM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
I reverted most of the changes except for first and except for new method CdmUtils.quoteRegExWithWildcard Andreas Müller
09:56 AM bug #8041 (Feedback): PatternSyntaxException in FeatureTreeSelectionDialog
I now had a closer look to how this is all used. And there are principal problems why this can not work.
The code ...
Andreas Müller
10:13 AM Revision 4d6934d9 (taxeditor): cleanup
Andreas Müller
10:13 AM Revision 071232d5 (taxeditor): ref #8041 revert all changes except for the first and for the new ...
Andreas Müller
10:09 AM Revision da9ff9c4 (cdmlib): ref #8041 correct regex quotation method implemented in CdmUtils
Andreas Müller

02/01/2019

06:55 PM bug #8039 (Closed): NPE when creating new name in unsaved NameTypeDesignation for exising name in...
ok, so I will close this issue. Andreas Kohlbecker
06:53 PM bug #7874 (Feedback): TeamOrPersonBase entity can become unusable due to replacement of the title...
would't it be necessary to add the following to `TeamOrPersonBase`?
~~~java
@Override
public boolean has...
Andreas Kohlbecker
02:24 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
commit:a55e93b5 was a bit to restricted only to Teams. Also it handled Persons not correct (they do not have an addi... Andreas Müller
06:27 PM bug #8056: WSOD in cdm_dataportal/search/results/taxon
"The stable Debian 10 Buster release date is to be expected in a second or third quarter of 2019. " Andreas Kohlbecker
06:25 PM bug #8056: WSOD in cdm_dataportal/search/results/taxon
Note: debian buster will bring libgd 2.2.5 for sure, see https://packages.debian.org/buster/libgd-dev Andreas Kohlbecker
06:22 PM bug #8056 (Resolved): WSOD in cdm_dataportal/search/results/taxon
This issue is supposed to be solved by libgd 2.2.5
On debian 8 (edit-production and edit-test) the version of lib...
Andreas Kohlbecker
05:58 PM bug #8056 (In Progress): WSOD in cdm_dataportal/search/results/taxon
This problem is caused by the image with the URI http://150.140.202.8/files/Others/small/DSCN0964.jpg. This jpeg file... Andreas Kohlbecker
05:04 PM bug #8056 (Closed): WSOD in cdm_dataportal/search/results/taxon
This WSOD happens in some special cases, for example
* Flora of Greece simple search for
* Linum pubescens*
...
Andreas Kohlbecker
06:08 PM Revision 62b804e6 (cdm-dataportal): ref #8056 allowing faltal errors to show up from imagecreatef...
Andreas Kohlbecker
06:07 PM Revision eadfd2ac (cdm-dataportal): commenting useless code part
Andreas Kohlbecker
04:29 PM Revision e5a59879 (taxeditor): ref #8041 try to fix pattern escaping issue (cont.)
Andreas Müller
04:27 PM feature request #7978: registration search result ordered by identifier descending
ready, please review again. (once test server is up to date) Andreas Kohlbecker
04:27 PM feature request #7978 (Resolved): registration search result ordered by identifier descending
Applied in changeset commit:cdmlib|572d38143187dcf1fe9ae6c79195acc0a1e1519b. Andreas Kohlbecker
04:27 PM Revision 572d3814 (cdmlib): fix #7978 registrationDTOs ordered by registration date
Andreas Kohlbecker
04:25 PM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
This is also not yet good, as \w matches ONLY a-zA-Z_0-9 . No letters from other languages like German Umlaut is reco... Andreas Müller
10:17 AM bug #8041 (Resolved): PatternSyntaxException in FeatureTreeSelectionDialog
Now the non-word characters are replaced by '.' Patrick Plitzner
04:25 PM bug #8051 (Resolved): improve display of registration items lists
fully implemented, please review
**Note:** There a minor glitches in the types section of the regitration items:
...
Andreas Kohlbecker
04:21 PM Revision f461a488 (cdm-dataportal): ref #8051 styling name and type in registration items to emph...
- cdm_tagged_text_expand_entity_references() and cdm_tagged_text_to_markup() respecting tagged text opotions
- usi...
Andreas Kohlbecker
04:03 PM Revision 7bd5476c (taxeditor): ref #8041 try to fix pattern escaping issue
Andreas Müller
04:02 PM Revision 9fc13c18 (taxeditor): cleanup
Andreas Müller
03:18 PM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Can you leave a message how the sorting is implemented now? To me i...
Andreas Müller
12:42 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Can you leave a message how the sorting is implemented now? To me it looks like Rank + alpha...
Katja Luther
10:32 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > * remove factual data view, wenn opening distribution editor
>
...
Katja Luther
10:19 AM task #7854 (Feedback): Open issues in TaxDistributionEditor
Congratulations. The Distr. Editor seems to work correctly now (except for the minor issues and improvements starting... Andreas Müller
10:16 AM task #7854: Open issues in TaxDistributionEditor
Can you leave a message how the sorting is implemented now? To me it looks like Rank + alphabet. True? But maybe we a... Andreas Müller
10:05 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> * remove factual data view, wenn opening distribution editor
This seems to work, but mayb...
Andreas Müller
09:53 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Is there a possiblity to enter the dropdown only by key strokes? As we allow moving in the c...
Andreas Müller
09:49 AM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > The filter for status shows the "None" state as default toString:
...
Andreas Müller
09:46 AM task #7854: Open issues in TaxDistributionEditor
It should be possible to delete the default reference somehow. Andreas Müller
09:39 AM task #7854: Open issues in TaxDistributionEditor
Maybe we can relabel "Default Source Reference" to "Default Source" to make it shorter. It is still clear this way.
...
Andreas Müller
09:17 AM task #7854: Open issues in TaxDistributionEditor
~~Is there a possiblity to enter the dropdown only by key strokes? As we allow moving in the cells with arrow keys it... Andreas Müller
09:14 AM task #7854: Open issues in TaxDistributionEditor
Filtering on status NONE does not work, but is maybe the most interesting of all filters Andreas Müller
02:57 PM task #8055 (New): Correct formatting for invalid designations
in TaxonRelationshipFormatter and TaxEditor.
Discuss with users.
Andreas Müller
02:55 PM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
The formatting is according to MAN now, with name author being "NON" author in the second row. Is this taken from the... Andreas Müller
02:45 PM feature request #7761: Invalid designations should be displayed like misapplied names in name editor
It would be nice to have a separate icon. MA stands for Misapplication. Can we have something like ID or IN. ID sound... Andreas Müller
02:36 PM feature request #7761 (Feedback): Invalid designations should be displayed like misapplied names ...
Relationship type in details view allows all relationship types now in dropdown. As long as we do not allow other con... Andreas Müller
02:45 PM feature request #7912: Enhance checkbox tree viewer
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Andreas Müller wrote:
> > > > 2....
Patrick Plitzner
02:43 PM feature request #7912: Enhance checkbox tree viewer
I created a new ticket for the top-level checkbox -> #8054 Patrick Plitzner
12:23 PM feature request #7912: Enhance checkbox tree viewer
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > 2. Even if greying the checkbox d...
Andreas Müller
12:22 PM feature request #7912 (Feedback): Enhance checkbox tree viewer
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > There is still an issue with the usage e.g. for distribution ed...
Andreas Müller
11:36 AM feature request #7912 (Resolved): Enhance checkbox tree viewer
Andreas Müller wrote:
> There is still an issue with the usage e.g. for distribution editor. Here you may not want t...
Patrick Plitzner
11:01 AM feature request #7912: Enhance checkbox tree viewer
Andreas Müller wrote:
> Andreas Müller wrote:
> > 2. Even if greying the checkbox does not work on Ubuntu for some...
Patrick Plitzner
02:42 PM feature request #8054 (New): Remaing issues - CheckBoxTreeComposite
copied from #7912:
**Improve display of top level items in checkbox tree viewer**
OK, this works. Only it feels a...
Patrick Plitzner
02:39 PM feature request #7887 (Resolved): Use DTOs in term editor
Andreas Müller wrote:
> Ordering does not seem to work anymore. I tested with a user defined named area vocabulary w...
Patrick Plitzner
01:02 PM feature request #7887: Use DTOs in term editor
Ordering does not seem to work anymore. I tested with a user defined named area vocabulary with 7 no hiearchical area... Andreas Müller
12:56 PM feature request #7887 (Feedback): Use DTOs in term editor
Patrick Plitzner wrote:
> Terms cannot be dropped above or below TermVocabulary any more
This seems to work now.
Andreas Müller
11:52 AM feature request #7887 (Resolved): Use DTOs in term editor
Terms cannot be dropped above or below TermVocabulary any more Patrick Plitzner
02:38 PM Revision 300999c0 (taxeditor): ref #7887 Fixed term sorting for ordered terms
Patrick Plitzner
02:26 PM Revision dfc93007 (cdmlib): ref #7874 added reference to ticket to test
Andreas Müller
02:21 PM Revision c497656b (cdmlib): ref #7874 implement cache update for additional caches
Andreas Müller
02:20 PM Revision 63a85a4d (cdmlib): cleanup
Andreas Müller
01:48 PM Revision 1443f45b (cdm-dataportal): registration item type related labels with bold font
Andreas Kohlbecker
01:47 PM Revision 12466422 (cdm-dataportal): ref #8051 typos and whitespace issue
Andreas Kohlbecker
01:24 PM feature request #7993 (Feedback): Display "Access Denied" dialog in case the remoting service res...
Seems to work now as expected except for the non emptied views. Can you please link to the new ticket and then close ... Andreas Müller
12:45 PM Revision 8edb3fc3 (taxeditor): ref #6952 Temporarily disallow deletion of non-empty vocabularies
Patrick Plitzner
12:41 PM bug #6952: Deleting terms does not get reflected in the UI and in the DB
Andreas Müller wrote:
> This is partly fixed. Deleting a single term works. The following issues do not yet work as ...
Patrick Plitzner
12:40 PM Revision 26b8a1bc (cdm-dataportal): ref #8051 harmonizing registrationDTO composition and splitti...
Andreas Kohlbecker
12:15 PM bug #7998 (Resolved): Store newly created Characters in selected vocabulary
Seems like all of the (reproducible) issues are fixed. Can you please review again? Patrick Plitzner
12:14 PM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> The text field is writable but shouldn't. Selection is done only via selection dialog. Shoul...
Patrick Plitzner
12:10 PM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> I wonder if we should not have a TermType "Character". Currently it looks like you choose th...
Patrick Plitzner
12:08 PM bug #7998: Store newly created Characters in selected vocabulary
Andreas Müller wrote:
> If choosing "Create new" in the vocabulary selection dialog it looks like the new vocabulary...
Patrick Plitzner
12:14 PM Revision d58179dd (taxeditor): ref #7998 Disabled vocabulary text field
Patrick Plitzner
12:02 PM Revision 1fb87aac (taxeditor): ref #7998 Fix possible NPE
Patrick Plitzner
11:59 AM feature request #6805 (Resolved): Implement drag and drop from Term Editor (Feature) to FeatureTr...
Andreas Müller wrote:
> Andreas Müller wrote:
> > Currently dropping is also allowed for other term types, e.g. Nam...
Patrick Plitzner
11:52 AM Revision 2e93783e (taxeditor): ref #7887 Terms cannot be dropped above or below TermVocabulary an...
Patrick Plitzner
11:43 AM bug #8043 (Worksforme): ConstraintViolationException in distribution editor
Yes this seems to work now. Andreas Müller
11:35 AM Revision d52bc40e (taxeditor): ref #7912 Add flag to allow selection of top level nodes
- default is false
- currently only allowed in area vocabulary selection in distribution
editor preferences
Patrick Plitzner
11:04 AM Revision af1c3bfc (taxeditor): code cleanup
Patrick Plitzner
10:52 AM feature request #7923: Add context menu and drag'n'drop to CharacterEditor
It is still considered experimental. This was just a ticket for myself so I did not assign anyone to review it. But a... Patrick Plitzner
10:33 AM bug #8032 (Closed): NPE when editing Local Prefs -> Factual Data
Evaluate preference in term label provider
commit:taxeditor|1b7e56c0b17c6646cade31f325b1bd997095ee7f
this is fi...
Patrick Plitzner
10:29 AM feature request #7680 (Closed): Refactor TaxonNodeDetailElement
Looks much better now. There is still happening a lot compared to the other "New-"wizards but a taxon node is a highl... Patrick Plitzner
10:17 AM Revision 787bc714 (taxeditor): ref #8041 Replace non-word characters with '.' instead of ""
Patrick Plitzner
10:15 AM bug #8037 (Closed): "Detail" is not saved in taxon node wizard
works fine Patrick Plitzner
09:54 AM Revision ca1409d8 (taxeditor): when opening name editor set focus to it
Katja Luther

01/31/2019

11:51 PM Revision 2b29b1bd (taxeditor): use same saving strategie for local name details pref as for db na...
Katja Luther
11:29 PM Revision e00acade (taxeditor): use same saving strategie for local name details pref as for db na...
Katja Luther
09:56 PM bug #8043 (Resolved): ConstraintViolationException in distribution editor
I think this exception was related to the strange behaviour of the distribution editor where the status of another ce... Katja Luther
10:58 AM bug #8043: ConstraintViolationException in distribution editor
this exception appears sometimes but I could not find a usecase to reproduce it. With changing the areas I could not ... Katja Luther
10:53 AM bug #8043: ConstraintViolationException in distribution editor
By the way, during editing I changed the selected areas. Maybe this was relevant. Not yet tested myself. Andreas Müller
10:52 AM bug #8043: ConstraintViolationException in distribution editor
This should be fixed in 5.5 if it can be reproduced. Andreas Müller
10:51 AM bug #8043 (Worksforme): ConstraintViolationException in distribution editor
On test1 I got a CVE when trying to save data that I edited before in distribution editor
~~~
login : admin
edit...
Andreas Müller
09:53 PM bug #8026 (Closed): details view is empty for some references in bulk editor
and the empty details view does not appear anymore Katja Luther
09:49 PM bug #8026: details view is empty for some references in bulk editor
Patrick Plitzner wrote:
> @Everybody: [DISCUSS] I switched the selection model of the bulk editor from row to cell s...
Katja Luther
09:46 PM feature request #7163 (Resolved): Restructure preferences
mobot preferences are grouped together now and removed all ":" Katja Luther
06:25 PM feature request #7163: Restructure preferences
With the new implementation Mobot Open URL Service is and BHL images params are still not grouped together. BHL Refer... Andreas Müller
06:19 PM feature request #7163: Restructure preferences
Katja Luther wrote:
> > Also translation is missing.
>
> I thought this is difficult to translate because everyon...
Andreas Müller
05:11 PM feature request #7163: Restructure preferences

> Also translation is missing.
I thought this is difficult to translate because everyone uses the english terms ;-)
Katja Luther
09:45 PM Revision ef85d9e0 (taxeditor): ref #7163: group Mobot preferences
Katja Luther
09:10 PM bug #7849 (Resolved): Improve DB Preferences handling and saving in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > If default value is selected and allow override = true the preferen...
Katja Luther
06:44 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Multiple cell selection in table is currently possible. As there is no function related to t...
Andreas Müller
06:38 PM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> still open:
>
> * remember the column widths
> * ~~filter for distribution columns~~
> * ...
Andreas Müller
06:32 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Not urgent but todo at some time: try to optimize the column width at start or after area se...
Andreas Müller
04:43 PM task #7854 (Resolved): Open issues in TaxDistributionEditor
Katja Luther
03:17 PM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Now, the rows are mixed somehow. Editing the 2 or 3 lines changes t...
Katja Luther
03:15 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Now, the rows are mixed somehow. Editing the 2 or 3 lines changes the first line. What I did...
Katja Luther
12:51 PM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > The dropbox for states opens on top. T...
Andreas Müller
12:44 PM task #7854 (Feedback): Open issues in TaxDistributionEditor
Now, the rows are mixed somehow. Editing the 2 or 3 lines changes the first line. What I did:
* Open all taxa of ...
Andreas Müller
06:12 PM Revision e2bf52fe (cdmlib): ref #7854 Fix NPE in TaxonDistributionDTO (2nd try)
Andreas Müller
05:27 PM Revision a6c5a604 (taxeditor): better structure for external services pref page
Katja Luther
05:15 PM Revision 7212f0bc (cdm-dataportal): moving methods regarding registrations to name.inc
Andreas Kohlbecker
05:05 PM feature request #7680 (Resolved): Refactor TaxonNodeDetailElement
Patrick Plitzner wrote:
> I have not stepped through all lines of code but still the **saveEntity()** method seems t...
Katja Luther
05:04 PM Revision 326dab64 (taxeditor): ref #7680: code cleaning remove unnecessary code
Katja Luther
04:43 PM bug #7856 (Resolved): Allow local override for distribution vocabularies
Andreas Müller wrote:
> Now after selecting another vocabulary (without override flag set, but this is probably not ...
Katja Luther
04:39 PM bug #7856: Allow local override for distribution vocabularies
now in admin preferences it is possible to set the distribution editor preferences even if activation is disabled. Lo... Katja Luther
04:40 PM bug #8037 (Resolved): "Detail" is not saved in taxon node wizard
now it is fixed Katja Luther
11:19 AM bug #8037 (Feedback): "Detail" is not saved in taxon node wizard
This still does not work for me.
And yes, it also does not work in the 5.4 release
Patrick Plitzner
10:01 AM bug #8037: "Detail" is not saved in taxon node wizard
Isn't this fixed already? Patrick, can you do review? Did it exist in 5.4 already? Andreas Müller
04:36 PM Revision f10b2ba0 (taxeditor): ref #7856: in admin preference keep distribution editor prefs enab...
Katja Luther
04:10 PM feature request #7993 (Resolved): Display "Access Denied" dialog in case the remoting service res...
the message is adapted and the message part of the login dialog is larger, now.
cleaning all views when changing t...
Katja Luther
03:55 PM feature request #7993: Display "Access Denied" dialog in case the remoting service responds with ...
Andreas Kohlbecker wrote:
> From the report which can be found in #8042 it seems obvious that it is still possible t...
Andreas Müller
01:10 PM feature request #7993: Display "Access Denied" dialog in case the remoting service responds with ...
From the report which can be found in #8042 it seems obvious that it is still possible to use the Editor after a succ... Andreas Kohlbecker
10:25 AM feature request #7993: Display "Access Denied" dialog in case the remoting service responds with ...
Katja Luther wrote:
> Andreas Müller wrote:
> > Also the message is too long for the message text field. We should ...
Andreas Müller
10:22 AM feature request #7993: Display "Access Denied" dialog in case the remoting service responds with ...
Andreas Müller wrote:
> Also the message is too long for the message text field. We should change the layout or shor...
Katja Luther
04:09 PM bug #8053 (New): Clear details and supplemental view after deleting a feature tree
When you delete a feature tree in the feature tree editor the details view and the supplemental data view are not cle... Patrick Plitzner
04:08 PM Revision dee24241 (taxeditor): ref #7993: change message size of message part
Katja Luther
03:52 PM bug #8052 (New): implement selenium tests for registration items lists
see #8051 Andreas Kohlbecker
03:51 PM bug #8051 (Closed): improve display of registration items lists
lists of registration items are being used in
* registration search results
* reference page nomenclatural acts s...
Andreas Kohlbecker
03:40 PM bug #8041 (Feedback): PatternSyntaxException in FeatureTreeSelectionDialog
Patrick Plitzner wrote:
> Works fine. I added a utility method to remove all non-word characters of the pattern beca...
Andreas Müller
02:08 PM bug #8041 (Closed): PatternSyntaxException in FeatureTreeSelectionDialog
Works fine. I added a utility method to remove all non-word characters of the pattern because search string with char... Patrick Plitzner
10:21 AM bug #8041: PatternSyntaxException in FeatureTreeSelectionDialog
please review
Katja Luther
09:57 AM bug #8041 (Resolved): PatternSyntaxException in FeatureTreeSelectionDialog
Applied in changeset commit:taxeditor|839b92539242127ea71873c516b4af61b269e110. Katja Luther
08:47 AM bug #8041 (Closed): PatternSyntaxException in FeatureTreeSelectionDialog
When entering '*' in the search field the following exception occurrs:
![](picture807-1.png)
I think I have s...
Patrick Plitzner
03:34 PM Revision 44032a96 (taxeditor): ref #8037: fix not saved microreference
Katja Luther
03:15 PM Revision 6f7fec64 (taxeditor): code cleaning
Katja Luther
03:15 PM Revision ac05a823 (taxeditor): ref #7854: fix problem of wrong setting of values in other cell
Katja Luther
03:00 PM bug #8050 (Closed): Create blocking registrations for un-registered names which are to be used in...
Implement the policy as defined in #8049:
*Wenn in einem nomenklatorischen Akt ein Name verwendet wird, der noch n...
Andreas Kohlbecker
02:39 PM Revision 57bddc87 (cdm-vaadin): TODO comment for future refactoring
Andreas Kohlbecker
02:10 PM bug #8039: NPE when creating new name in unsaved NameTypeDesignation for exising name in workings...
If this is the solution in case a existing but not registered name can be registered within a name type designation, ... Wolf-Henning Kusber
01:36 PM bug #8039: NPE when creating new name in unsaved NameTypeDesignation for exising name in workings...
Hi Henning,
please can you review this solution. See the step by step description on how to reproduce the problem.
Andreas Kohlbecker
01:34 PM bug #8039 (Resolved): NPE when creating new name in unsaved NameTypeDesignation for exising name ...
Applied in changeset commit:cdm-vaadin|bfd1283e6d671337a83b6c2990cc8ddf4eb03c99. Andreas Kohlbecker
02:05 PM Revision 38b475da (taxeditor): ref #8041 trim all non-word characters in selecti dialog search st...
Patrick Plitzner
02:05 PM Revision b5046c38 (cdmlib): ref #8041 Add CdmUtils method to trim a string of non-word characters
Patrick Plitzner
01:49 PM feature request #8048 (Closed): Selenium test for Registration page
implement a selenium test for the registration page
Thew test should cover #7977, #7947, #7616, #7907
Andreas Kohlbecker
01:40 PM bug #7481 (Resolved): ReferenceEditor: filter inReferences by applicable reference type
BookSection is now added to the allowed inReference types for Section.
please review again.
Andreas Kohlbecker
01:38 PM Revision afb7802b (cdmlib): ref #7481 adding BookSection to inReference constraints
Andreas Kohlbecker
01:36 PM Revision 8c761221 (taxeditor): save status for distribution editor locally the same as in db
Katja Luther
01:34 PM Revision bfd1283e (cdm-vaadin): fix #8039 proper handling of un-persisted registrations with bloc...
Andreas Kohlbecker
01:32 PM Revision 134e317a (cdmlib): ref #8039 additional addTypeDesignation method in RegistrationService
Andreas Kohlbecker
01:19 PM Revision b81fb3cb (taxeditor): ref #7854: fix saving problem
Katja Luther
01:11 PM Revision 85c7f77c (taxeditor): ref #7993: show better dialog when access denied and adapt RemoteC...
Katja Luther
01:03 PM Revision 48f770f5 (cdmlib): ref #7854 Fix NPE in TaxonDistributionDTO
Andreas Müller
12:50 PM task #8047 (New): Remaining issues in TaxDistributionEditor
Copied from #7854
* Correct tooltips for "Add Source" and "Remove sources"
* Disable "Add Source" or "Remove So...
Andreas Müller
12:27 PM feature request #8045: Improve handling of default values and override in local preferences
Katja Luther wrote:
> I would show the value of the db preference in the drop down, but with ("global") or ("db") be...
Andreas Müller
12:22 PM feature request #8045: Improve handling of default values and override in local preferences
I would show the value of the db preference in the drop down, but with ("global") or ("db") behind Katja Luther
12:21 PM feature request #8045: Improve handling of default values and override in local preferences
I don't know if we really need "db preference" as explicit value. It makes it more difficult to understand and there ... Andreas Müller
12:05 PM feature request #8045 (Feedback): Improve handling of default values and override in local prefer...
For selection of default, dbPreference or explicit local value the local preference pages should have combo boxes.
...
Katja Luther
12:18 PM bug #8042 (Closed): UI is too restricted for users with right Project Manager
agreed! Andreas Kohlbecker
12:12 PM bug #8042: UI is too restricted for users with right Project Manager
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas Kohlbecker wrote:
> >
> > > Obviously it is still ...
Andreas Müller
12:08 PM bug #8042: UI is too restricted for users with right Project Manager
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
>
> > Obviously it is still possible to use the Editor after a ...
Andreas Kohlbecker
12:06 PM bug #8042: UI is too restricted for users with right Project Manager
Andreas Kohlbecker wrote:
> Obviously it is still possible to use the Editor after a successful login with a user ...
Andreas Müller
12:00 PM bug #8042 (In Progress): UI is too restricted for users with right Project Manager
I created access to remoting for 'ROLE_PROJECT_MANAGER' but the subject of this ticket is another problem:
Obvious...
Andreas Kohlbecker
10:20 AM bug #8042: UI is too restricted for users with right Project Manager
I assign this to AK as it is related to the new rights. We had already discussed that ProjectManager also needs remot... Andreas Müller
10:12 AM bug #8042 (Closed): UI is too restricted for users with right Project Manager
This happened for Tilo when he was trying to log in to additivity_ontology on edit-test.
![](picture683-1.png)
...
Patrick Plitzner
12:08 PM feature request #8046 (Rejected): Term lists in term manager should be positiv lists
Actually the termlists in term manager are negativ lists but for most of the terms we have long lists of terms we do ... Katja Luther
11:47 AM Revision c1d9a788 (cdmlib): ref #7972, ref #8042 permitting remoting access to ROLE_PROJECT_MANAGER
Andreas Kohlbecker
11:12 AM feature request #8044 (Feedback): Add "Move to..." menu to term editor
Just like in the taxon navigator it should be possible to move a term to another term which is selected in a dialog.
...
Patrick Plitzner
10:42 AM bug #7999 (Closed): Allow override does not work correctly for distribution areas
This seems to work as expected now. Andreas Müller
10:30 AM Revision a59c4b04 (taxeditor): Sort terms in term editor by label when order index is zero
Patrick Plitzner
10:24 AM Revision 1b7e56c0 (taxeditor): Evaluate "show id in vocabulary" preference in term editor
Patrick Plitzner
10:24 AM Revision 882600fb (taxeditor): Sort terms in term editor by label when no order index is given
Patrick Plitzner
09:57 AM Revision 839b9253 (taxeditor): fix #8041: fix syntax pattern exception
Katja Luther

01/30/2019

07:25 PM feature request #8040 (New): Portal filter with time span
Feature request
combine scientific name or scientific name from taxon graph with:
Registration date begin
[___...
Wolf-Henning Kusber
05:13 PM bug #8026 (Resolved): details view is empty for some references in bulk editor
@Everybody: [DISCUSS] I switched the selection model of the bulk editor from row to cell selection. This has to be do... Patrick Plitzner
03:38 PM bug #8026: details view is empty for some references in bulk editor
Patrick could you have a look at this, please? Maybe there is a problem with the accessor class. Katja Luther
01:11 PM bug #8026: details view is empty for some references in bulk editor
The selection from the bulk editor is empty because getFullySelectedRowPositions(int rowWidth) returns -1 Katja Luther
08:44 AM bug #8026 (Feedback): details view is empty for some references in bulk editor
In what DB did this happen? Patrick Plitzner
05:11 PM Revision 3bb757a5 (taxeditor): ref #8026 Changed selection to cell selection in bulk editor
- Fix empty details view in some cases Patrick Plitzner
04:36 PM feature request #7977 (Closed): Registration page layout improved
Fully implemented, closing issue. Andreas Kohlbecker
04:29 PM Revision f8283d8a (cdm-dataportal): ref #7977 page title as 'Registration Id:'
Andreas Kohlbecker
04:27 PM Revision 18f73480 (cdm-dataportal): ref #7977 page title as 'Registration Id' ...
Andreas Kohlbecker
04:14 PM bug #7481 (In Progress): ReferenceEditor: filter inReferences by applicable reference type
Ah ok! We will extend the allowed inref types for section by adding BookSection:
~~~
Section -> Article | Book | ...
Andreas Kohlbecker
03:43 PM bug #7481: ReferenceEditor: filter inReferences by applicable reference type
May be a Vaadin problem.
I reproduced the above mentioned
1st step: enter Reference (book)
2nd step: enter Refer...
Wolf-Henning Kusber
03:26 PM bug #7481 (Feedback): ReferenceEditor: filter inReferences by applicable reference type
Wolf-Henning Kusber wrote:
> Comment: "There is no such type named inBookSection in the cdm"
> Warning "BookSection...
Andreas Kohlbecker
01:45 PM bug #7481: ReferenceEditor: filter inReferences by applicable reference type
Comment: "There is no such type named inBookSection in the cdm"
Warning "BookSection is not a suitable in-reference ...
Wolf-Henning Kusber
03:59 PM feature request #7978 (In Progress): registration search result ordered by identifier descending
good idea! Wolf-Henning Kusber
03:54 PM feature request #7978 (Feedback): registration search result ordered by identifier descending
In the report for the meeting with Walter i found the following requirement: "*WHK: neueste Registrierungen oben;*".
...
Andreas Kohlbecker
03:45 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> If default value is selected and allow override = true the preference is still not deleted f...
Katja Luther
03:44 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Special case in Specimen page of local prefs: In a fresh database "Zeige specimenbezogene Vi...
Katja Luther
01:30 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> Critical: DB prefs for Name Details View do not seem to exist anymore
this is fixed
Katja Luther
12:15 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> It looks like in the DB prefs specimen page the 4 below prefs are not set to allow override ...
Katja Luther
03:43 PM Revision 31bef991 (taxeditor): ref #7849: minor changes specimen related preferences
Katja Luther
03:37 PM task #7854 (Resolved): Open issues in TaxDistributionEditor
I hope that all issues are solved now. In my tests all changes of cells are passed to the details view and the source... Katja Luther
03:29 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> In general I wonder if the behaviour that clicking into the cell immediately opens the dropd...
Katja Luther
03:13 PM task #7854: Open issues in TaxDistributionEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > It seems to be a problem with the enter cell event. Here I opened a...
Katja Luther
03:07 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Horizontal scrollbar should appear only if necessary. This is the case only after resize of ...
Katja Luther
02:59 PM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > The dropbox for states opens on top. This leads to a cut of the l...
Katja Luther
10:51 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> The dropbox for states has a checkbox. As it is only for selecting a single state this does ...
Katja Luther
10:51 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> The filter for status shows the "None" state as default toString:
>
> ![](picture907-1.pn...
Katja Luther
10:33 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > In preferences translate possible configuration terms "Show IdInV...
Katja Luther
10:02 AM task #7854: Open issues in TaxDistributionEditor
Andreas Müller wrote:
> It seems to be a problem with the enter cell event. Here I opened a fresh DistrEditor and cl...
Katja Luther
03:11 PM Revision c3ef0593 (taxeditor): ref #7854: minor
Katja Luther
03:06 PM Revision 22c22144 (taxeditor): ref #7854: ClientAreaResize to avoid scrollbars where it is not ne...
Katja Luther
02:58 PM Revision 2fc06005 (taxeditor): ref #7854: add max visible items for drop down in distribution editor
Katja Luther
02:53 PM Revision 09330f46 (taxeditor): ref #7854: do not create new distribution without status
Katja Luther
02:38 PM Revision 2c5f962c (taxeditor): ref #7854: minor
Katja Luther
02:36 PM Revision 018b80b2 (taxeditor): ref #7854: improve handling of selection changes in distribution e...
Katja Luther
02:15 PM bug #8037 (Resolved): "Detail" is not saved in taxon node wizard
Applied in changeset commit:taxeditor|ce47eebd216370b1afe26fc4793a082454d228e1. Katja Luther
09:37 AM bug #8037 (Closed): "Detail" is not saved in taxon node wizard
Data entered in the "Detail" field of the taxon node wizard is stored neither when creating a new taxon node nor when... Patrick Plitzner
02:06 PM bug #8039 (Closed): NPE when creating new name in unsaved NameTypeDesignation for exising name in...
to reporoduce:
1. add "existing name" to workingset
1. add NameTypeDesignation
1. create new "Typified Name"
1....
Andreas Kohlbecker
01:40 PM Revision ce47eebd (taxeditor): fix #8037: set microrefence correctly
Katja Luther
01:36 PM Revision 6ffe25c9 (cdmlib): ref #7854: change label for term display
Katja Luther
01:29 PM Revision 42aae678 (taxeditor): ref #7849: fix problems in preferences
Katja Luther
01:28 PM Revision ebb78401 (taxeditor): ref #7849: fix problems in specimen preference page
Katja Luther
01:13 PM bug #8038 (Duplicate): NullPointerException when accessing newly created workingset
this has been fixed already, see #8013 Andreas Kohlbecker
11:29 AM bug #8038 (Duplicate): NullPointerException when accessing newly created workingset

Testsystem:
Submitter w.h.kusber selected „new“ the Reference
Blanco … Olenici … Bolentín …
c039e0d4-cf0d-4d5f-...
Wolf-Henning Kusber
01:04 PM Revision d0237f32 (cdm-vaadin): ref #8035 temporary solution to solve layout problems in switchab...
Andreas Kohlbecker
12:50 PM bug #7767 (Closed): Incorrect handling of secundum detail reference in formatter
No need to remove the workaround applied with cdm-dataportal|79f9e857 since it was only applied to the hotfix/5.3.1 w... Andreas Kohlbecker
12:48 PM bug #7794: Update TaxonNodeWizard
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> >
> > > Do we need a classification choo...
Katja Luther
10:01 AM bug #7794: Update TaxonNodeWizard
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > >
> > > > D...
Andreas Müller
09:35 AM bug #7794: Update TaxonNodeWizard
Andreas Müller wrote:
> Katja Luther wrote:
> >
> > how did you get this? I can not reproduce it.
>
> It seems...
Katja Luther
09:34 AM bug #7794: Update TaxonNodeWizard
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> >
> > > Do we need a classification choo...
Katja Luther
12:43 PM bug #7836 (Closed): ClassCastException when invoking cdm light export with wrong selection
this works fine Patrick Plitzner
12:38 PM bug #7836: ClassCastException when invoking cdm light export with wrong selection
the preference show IO menu is enabled? Katja Luther
12:36 PM bug #7836 (Feedback): ClassCastException when invoking cdm light export with wrong selection
Patrick Plitzner
12:13 PM bug #7999 (Resolved): Allow override does not work correctly for distribution areas
Applied in changeset commit:taxeditor|2470b75b282ae6caa910744fb0fc14d8b1165411. Katja Luther
12:12 PM Revision 2470b75b (taxeditor): fix #7999: fix NPE in namedetailsview config when no db pref avail...
Katja Luther
11:56 AM feature request #6805: Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
Andreas Müller wrote:
> If dropping a feature directly above a vocabulary it is added at the end of the vocabulary. ...
Patrick Plitzner
11:06 AM bug #8035: Vaadin Collector team layout
This issue seems to be due to the changes which have been applied in #7950 Andreas Kohlbecker
10:46 AM Revision ec6c94b9 (taxeditor): ref #7854: fix problems in distribution editor
Katja Luther
10:09 AM Revision e980623e (taxeditor): ref #8037: handle setting of microreference
Katja Luther
09:37 AM feature request #7680 (Feedback): Refactor TaxonNodeDetailElement
I have not stepped through all lines of code but still the **saveEntity()** method seems to do too much. A new taxon ... Patrick Plitzner
09:34 AM bug #8036 (New): Widget disposed expection when creating a new taxon
steps to reproduce
1. Create a new taxon via right-click on classification or taxon in taxon navigator
1. Choose ...
Patrick Plitzner
09:34 AM Revision e91fb609 (taxeditor): ref #7794: fix classification selection combo in taxonnode wizard
Katja Luther
09:27 AM bug #8032 (Resolved): NPE when editing Local Prefs -> Factual Data
Applied in changeset commit:taxeditor|93af103db55389f80f9968280171e4987954f743. Katja Luther
09:27 AM Revision 93af103d (taxeditor): fix #8032: fix NPE in publishFlag preference page
Katja Luther
08:28 AM feature request #6806 (Resolved): Add context menu to FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Export menu is disabled on Feature...
Patrick Plitzner
08:28 AM Revision 0800831b (taxeditor): ref #6806 Disable export context menu for feature nodes
Patrick Plitzner
08:07 AM bug #7950 (Closed): ToOneRelatedEntityCombobox: add new button "jumpes" to the right when hoverin...
Wolf-Henning Kusber wrote:
> State of the art (29.01.2019):
>
>
> Minor issue (see 2 on the screenshot): Scroll...
Andreas Kohlbecker
08:04 AM bug #7910 (Closed): TeamOrPersonField: readonly exception on bindig data
Andreas Kohlbecker
 

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