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From 05/26/2017 to 06/24/2017

06/23/2017

11:38 PM Revision 28cacf65 (cdm-vaadin): ref #6724 types editor row items enablement by derivationEventTyp...
Andreas Kohlbecker
02:41 PM bug #6751: After shutdown error message in log file
I guess this is taxeditor, not server-maintanance not Andreas Müller
01:16 PM bug #6751 (New): After shutdown error message in log file
Hallo Katja,
seit dem letzten stable Editor-Update werde ich meist (immer?) auf folgende Fehlermeldung im cdmLibra...
Katja Luther
02:01 PM Revision 75f480ed (cdmlib): reorganize publication date output in cdm light export
Katja Luther
02:01 PM Revision 93c0f44c (cdmlib): reorganize publication date output in cdm light export
Katja Luther
01:51 PM feature request #6752 (New): Add verbatimDate
We may need an additional field verbatimDate which is e.g. for references the date when the reference was published a... Andreas Müller
01:22 PM bug #6627: Remaining output model issues
Hallo,
wir haben Zitate, die z.B. folgendermaßen aussehen:
Mauria heterophylla Kunth, Nov. Gen. Sp. 7: 13-14, t. ...
Katja Luther
01:09 PM bug #6747: Media and Facts view is inactive for specimen editor
Hallo,
ich habe jetzt die Verknüpfungen zwischen FactualDataView/MediaView und DerivateView wieder hin bekommen, a...
Katja Luther
12:55 PM feature request #6596 (Feedback): Migrate specimen editor
Reopen as there are subtasks not yet solved Andreas Müller
12:21 PM Revision f037ce2a (cdmlib): upgrading the maven-bundle-plugin to 3.3.0
Andreas Kohlbecker
12:00 PM Revision 4a3c0817 (cdm-vaadin): ref #6724 SpecimenTypeDesignationWorkingsetEditor with Types sub ...
Andreas Kohlbecker
11:25 AM feature request #6724 (Feedback): Popup Editor for SpecimenTypeDesignation Workingsets
Hi Henning,
for metablic inactivated cultivation I would choose `LivingSpecimen` as the baseOfRecord:
"*An orga...
Andreas Kohlbecker
11:19 AM bug #6733 (Closed): NPE when trying to open Derivative Editor
Andreas Müller
11:09 AM feature request #6750 (Resolved): DerivedUnitConverter which can convert DerivedUnits <--> MediaS...
Applied in changeset commit:cdmlib|86003ec591349e901b924bf5cdf4d52af06e6097. Andreas Kohlbecker
10:59 AM feature request #6750 (Resolved): DerivedUnitConverter which can convert DerivedUnits <--> MediaS...
For the Phycobank TypeSpecimenWorkingSet Editor DerivedUnits need to be converted into MediaSpecimen and vice verca Andreas Kohlbecker
11:09 AM Revision 86003ec5 (cdmlib): fix #6750 implementing DerivedUnitConverter with test
Andreas Kohlbecker
10:27 AM bug #6748 (Resolved): Linking between derivate view and facts/media view
seems to work now with the changes for the other derivate view tickets. Katja Luther
10:13 AM Revision 94665309 (taxeditor): set derivate view dirty if description detail is edited
Katja Luther
08:51 AM Revision 42b909f6 (taxeditor): change wizard name of cdmLightExport in plugin.xml
Katja Luther

06/22/2017

01:54 PM Revision f68f9e94 (cdm-vaadin): ref #6724 Custom Field for geo location Points
Andreas Kohlbecker
01:53 PM Revision 0cdf9b79 (cdmlib): remove identifier from name table
Katja Luther
01:52 PM Revision c0ed29cc (cdmlib): add identifier table
Katja Luther
11:55 AM bug #6747: Media and Facts view is inactive for specimen editor
Andreas Müller wrote:
> The behavior for the Factual Data View is a bit similar. The dirty flag is also not set. How...
Katja Luther
10:26 AM bug #6747: Media and Facts view is inactive for specimen editor
Andreas Müller wrote:
> The media view is now active when you select a field or derived unit in specimen editor. But...
Katja Luther
11:50 AM Revision 58480902 (taxeditor): avoid that mediaViewPart is inactive when details view has the focus
Katja Luther
11:25 AM Revision cfabbeb0 (cdm-vaadin): ref #6724 SpecimenTypeDesignationWorkingsetEditor improvements
- better country select item captions
- extending the SpecimenTypeDesignationWorkingSetDTO
- adding more fields t...
Andreas Kohlbecker

06/21/2017

08:28 PM bug #6748: Linking between derivate view and facts/media view
It seems like the linking is correct for the media view but not for the facts view Andreas Müller
02:30 PM bug #6748 (Resolved): Linking between derivate view and facts/media view
If the derivate view is selected but in the right hand corner like it is, when it is opened. Then the "active editor"... Katja Luther
08:04 PM bug #6747: Media and Facts view is inactive for specimen editor
The behavior for the Factual Data View is a bit similar. The dirty flag is also not set. However, the Factual Data Vi... Andreas Müller
07:59 PM bug #6747 (Feedback): Media and Facts view is inactive for specimen editor
The media view is now active when you select a field or derived unit in specimen editor. But when you edit a media in... Andreas Müller
03:16 PM bug #6747 (Resolved): Media and Facts view is inactive for specimen editor
Katja Luther
03:10 PM bug #6747: Media and Facts view is inactive for specimen editor
Now the media and facts view is available. To show the menu of the media view I deleted the visibleWhen part in plugi... Katja Luther
02:27 PM bug #6747 (Feedback): Media and Facts view is inactive for specimen editor
For the specimen editor there is no media and no facts view available anymore.
In e3 architecture we had an interf...
Katja Luther
06:16 PM bug #6684: Use media representation which best fits the available viewport size for the Image Ove...
This can not be done quickly. The lightbox always shows those images that are contained in the gallery. Therefore we ... Andreas Kohlbecker
06:03 PM Revision 4946eebf (cdm-dataportal): ref #6683 bugfixes in image viewer
Andreas Kohlbecker
05:46 PM bug #6683 (Resolved): Use best quality media representation in image viewer on media page
Applied in changeset commit:cdm-dataportal|4fa6f9bae51a5c5983d9effd0b88a90dca13cc65. Andreas Kohlbecker
05:46 PM Revision 4fa6f9ba (cdm-dataportal): fix #6683 using cdm_preferred_media_representations for image...
Andreas Kohlbecker
03:45 PM bug #6726 (Closed): NPE in FactualDataView and feature selection does not show any entries in Fac...
Seems to be fixed Andreas Müller
03:14 PM Revision 3166303d (taxeditor): to show the menu of the media view for derivate view
Katja Luther
03:05 PM bug #6701 (Duplicate): Add new media does not work in specimen editor
Katja Luther
03:04 PM bug #6701: Add new media does not work in specimen editor
This was because no media was attached to the newly created mediaSpecimen Katja Luther
03:03 PM Revision 2abe4473 (taxeditor): workaround to show media and facts view for derivateView
Katja Luther
02:47 PM bug #6749 (Resolved): No media is created for new mediaSpecimen
Applied in changeset commit:taxeditor|0c3d26b26afa73b6eba4020ad4aa281d8ca0b7f4. Katja Luther
02:45 PM bug #6749 (Resolved): No media is created for new mediaSpecimen
Katja Luther
02:47 PM Revision 0c3d26b2 (taxeditor): fix #6749: add media to newly created mediaSpecimen
Katja Luther
11:51 AM bug #6668: NPE in DetailsView when deleting a type specimen
I can't reproduce it in this way. If the type specimen is deleted in specimen editor and the name editor is already o... Katja Luther
11:09 AM bug #6473 (Resolved): Marker by default should be true
Applied in changeset commit:taxeditor|9e848eb6540d0d22b84eeec14e09cffa4714d5a8. Patrick Plitzner
11:08 AM Revision 9e848eb6 (taxeditor): fix #6473 Set initial marker state to true
Patrick Plitzner
10:59 AM Revision 30e2c996 (taxeditor): ref #6596 Enable supplemental data view for specimen editor
Patrick Plitzner
10:55 AM bug #6355: Improve message if server is down
In the above case the interruption took place during lazy initialization:
~~~
login : w.berendsohn
editor versio...
Andreas Müller
10:33 AM bug #6355: Improve message if server is down
Andreas M.:
"wie schon öfters erwähnt, sollten wir hier ja versuchen, eine nutzerfreundlichere Fehlermeldung anzuzei...
Patrick Plitzner
10:53 AM Revision d3e5db7e (taxeditor): Remove dot at the end of derivative labels
Patrick Plitzner
10:45 AM bug #5417: Search not working correctly in Bulk Editor
is this still an open issue? Andreas Müller
10:20 AM task #6745: Investigate how e4 model changes affect the cached application model in exisiting Tax...
Ja, das ist ein wichtiges Thema. Insbesondere wenn man nightly häufig neuinstalliert, bekommt man beim ersten mal imm... Andreas Müller
07:22 AM task #6745 (New): Investigate how e4 model changes affect the cached application model in exisiti...
The application model of the Taxeditor is stored in `{home}/.cdmLibrary/.metadata/.plugins/org.eclipse.e4.workbench/w... Patrick Plitzner
10:01 AM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Adding a new top level feature is ...
Patrick Plitzner
09:31 AM feature request #6694: Migrate FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Adding a new top level feature is not possible once a feature n...
Andreas Müller
07:55 AM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Supplemental data are not yet shown (view is grey). It will not show many data but created, ...
Patrick Plitzner
07:52 AM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Adding a new top level feature is not possible once a feature node is selected
To do this...
Patrick Plitzner
10:00 AM Revision 17502849 (taxeditor): ref #6694 Use service methods to add and remove features
Patrick Plitzner
10:00 AM Revision 21fbfba9 (taxeditor): ref #6694 Always add new features to root node
Patrick Plitzner
10:00 AM Revision 72083749 (taxeditor): ref #6566 Remove session view from plugin.xml
Patrick Plitzner
10:00 AM Revision 0343d833 (taxeditor): ref #6694 Add CdmEntitySessionHandling to feature tree editor
Patrick Plitzner
09:57 AM Revision fbc64294 (cdmlib): ref #6694 Add service method to add child features
- also add parent of deleted feature node to DeleteResult Patrick Plitzner
09:12 AM Revision 2c7c96aa (taxeditor): minor
Katja Luther
07:54 AM feature request #6746 (New): Implement DetailsView and show SupplementalDataView for FeatureNode
Patrick Plitzner

06/20/2017

12:50 AM feature request #6694: Migrate FeatureTreeEditor
Also for the trees themselves no supplemental data and details view is available, but might be a nice feature. Andreas Müller
12:48 AM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
>
> 2 problems:
>
> * even if NO feature tree is selected the...
Andreas Müller
12:47 AM feature request #6694: Migrate FeatureTreeEditor
Supplemental data are not yet shown (view is grey). It will not show many data but created, id and uuid might be very... Andreas Müller
12:42 AM feature request #6694: Migrate FeatureTreeEditor
Adding a new top level feature is not possible once a feature node is selected Andreas Müller
12:32 AM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> and when deleting a feature I get an NPE:
>
> ~~~
> login : admin
> ...
> ~~~
This ...
Andreas Müller
12:29 AM feature request #6694: Migrate FeatureTreeEditor
and when deleting a feature I get an NPE:
~~~
login : admin
editor version : 4.8.0.201706201949
server : test.e...
Andreas Müller
12:26 AM feature request #6694: Migrate FeatureTreeEditor
Now, when trying to add a new feature in the feature tree I always get an LIE
~~~
login : admin
editor version...
Andreas Müller
10:58 AM feature request #6694: Migrate FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Patrick Plitzner wrote:
> > The menu is at the right position ...
Andreas Müller
10:16 AM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Please move the menu entry to "Ter...
Patrick Plitzner
09:45 PM Revision a2cd7ba3 (cdm-vaadin): ref #6724 registration specific DerivationEventTypes: CULTURE_MET...
Andreas Kohlbecker
09:42 PM bug #6743 (Resolved): Translation missing for Specimen-Editor context menu
Patrick Plitzner
08:59 PM bug #6743: Translation missing for Specimen-Editor context menu
l10n added with commit:taxeditor|2dd59866e9b4b558f1ce5f1d98cfd3063a3180fa. Patrick Plitzner
05:51 PM bug #6743 (Resolved): Translation missing for Specimen-Editor context menu
"Add" with sub-menues, "Create Field Unit", "Link with taxon selection" are not translated yet.
Maybe also some ot...
Andreas Müller
09:41 PM Revision ca0e8f6d (taxeditor): fix ref #6743 missing l10n for specimen editor context menu
Patrick Plitzner
09:22 PM task #6258 (Closed): Add Registration to cdm model
Andreas Kohlbecker
06:55 PM task #6258: Add Registration to cdm model
can this be closed? Andreas Müller
08:58 PM Revision 2dd59866 (taxeditor): l10n for specimen editor context menu
Patrick Plitzner
08:27 PM Revision 02fbce4a (taxeditor): ref #6694 l10n of FeatureTreeEditor
Patrick Plitzner
06:31 PM Revision 0196a8bf (cdmlib): ref #6694 Fix moving of feature nodes
Patrick Plitzner
06:31 PM Revision 8b0c4c63 (taxeditor): ref #6694 Fix drag and drop behavior
Patrick Plitzner
06:04 PM bug #6582 (Closed): status bar not completely visible
Open issue copied to new ticket #6744 Andreas Müller
06:03 PM bug #6744 (New): Status bar not completely visible in width
For details see #6582#note-4 Andreas Müller
05:44 PM feature request #6676: A user with READ access to taxa but WRITE access to factual data cannot up...
Not showing data at all for the factual data view might be an unwanted behavior.
However, not being able to **edit...
Andreas Müller
05:28 PM feature request #6624 (Duplicate): Campanula related portal issues
Andreas Müller
04:52 PM feature request #6724: Popup Editor for SpecimenTypeDesignation Workingsets
[on behalf of Henning and Regine]
„**Absolute elevation**“ Kommentar: wir kennen eigentlich nur den Bezug zu N.N. ...
Andreas Kohlbecker
04:50 PM bug #6742 (New): IAE when using "Link with taxon selection" in Specimen-Editor
... with no taxon selected
~~~
login : admin
editor version : 4.8.0.201706201350
server : test.e-taxonomy.eu ...
Andreas Müller
04:44 PM task #5375: cdm-server without jsvc
reverting package upgrades can easily be done by the method that I described at stack overflow: https://superuser.com... Andreas Kohlbecker
01:55 PM task #5375: cdm-server without jsvc
jsvc seems to cause Sigfaults in the jvm with the latest debian jessy updates, which where:
* libc6-dev amd64 2....
Andreas Kohlbecker
04:43 PM Revision 50c9803d (taxeditor): ref #6694 Fix session handling when moving feature nodes
Patrick Plitzner
04:43 PM Revision 489923b4 (cdmlib): ref #6694 Add service method to move FeatureNodes
Patrick Plitzner
03:07 PM Revision f35bd02a (taxeditor): ref #6730 Adapt to cdmlib changes
Patrick Plitzner
02:30 PM Revision 4cab9405 (taxeditor): ref #6694 Extract composite and Listeners from FeatureTreeEditor
# Conflicts:
# eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/e4/FeatureTreeEditor.java
Patrick Plitzner
02:10 PM Revision 2b6e8d64 (taxeditor): ref #6730: fix delete of media
Katja Luther
02:02 PM Revision 7620acb4 (cdmlib): ref #6730: fix delete of media
Katja Luther
11:49 AM feature request #6658 (Resolved): Make mediaCreated editable in Media view
created new ticket for editing in textfield and set this ticket to resolved. Katja Luther
11:48 AM feature request #6741 (New): Edit Date in TextField
actually it is only allowed to edit a date with the date dialog but it should be possible to edit it in textfield, to... Katja Luther
11:44 AM Revision b159d907 (taxeditor): remove pattern string from DateElement when no data are available
Katja Luther
10:59 AM Revision dd665bef (taxeditor): ref #6658: show actual data in DateElement and add title
Katja Luther
10:25 AM Revision 0b4f079d (taxeditor): cdmLight Export create zip is configurable and save last export fo...
Katja Luther
10:23 AM Revision cfbd89d6 (taxeditor): ref #6694 Make text field editable only when feature tree is selected
Patrick Plitzner
10:16 AM Revision 229af84a (taxeditor): ref #6694 Add separator to term menu
Patrick Plitzner
09:23 AM Revision ea937524 (cdm-vaadin): ref #6724 registration specific DerivationEventTypes
Andreas Kohlbecker
09:15 AM Revision c7794cca (cdmlib): cdmLight export configurator: configure whether result is a zip file ...
Katja Luther

06/19/2017

10:38 PM feature request #6740 (New): Popup Editor for NameTypeDesignation Workingsets
Andreas Kohlbecker
05:04 PM Revision b994005d (taxeditor): Integrate FeatureTreeEditorComposite into CharacterEditor
Patrick Plitzner
03:24 PM Revision 631f622d (cdmlib): smaller changes in specimen import
Katja Luther
03:23 PM Revision 451fef0f (cdmlib): smaller changes in specimen import and excel import
Katja Luther
03:22 PM feature request #6738 (New): create generic icons for specimen editor
Botanical icons are used at the moment.
The need for generic icons also covering other organimsm groups has been str...
Tilo Henning
03:00 PM Revision c56148f4 (taxeditor): revert creation of zip file for cdmlight export, save the export f...
Katja Luther
02:41 PM Revision 3510f376 (cdmlib): outputmodel -> cdmLight
Katja Luther
02:20 PM Revision 51f874ee (taxeditor): add name change in manifest.mf
Katja Luther
02:12 PM Revision f6b1d0ad (taxeditor): rename outputmodel -> cdmLight
Katja Luther
02:06 PM Revision 4abc0e5b (cdmlib): rename outputModel to cdmLight
Katja Luther
02:00 PM Revision f5948c6e (taxeditor): Bug fix in reverse complementing uncut read sequences.
Ben Stöver
01:54 PM Revision a0c384e7 (taxeditor): save cdm light export to zip file
Katja Luther
01:23 PM Revision e75532a6 (taxeditor): smaller changes in wizard for file export
Katja Luther
01:12 PM Revision a88f31c5 (taxeditor): Translation of menu text corrected.
Ben Stöver
01:01 PM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Sometimes there is a bug when movi...
Andreas Müller
12:58 PM feature request #6694: Migrate FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Sometimes there is a bug when moving nodes. The node does not g...
Andreas Müller
12:55 PM feature request #6694: Migrate FeatureTreeEditor
Can you provide according translations for the tab title and the title lable. Something like "Merkmals Baum Editor" u... Andreas Müller
12:54 PM feature request #6694: Migrate FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > If entering text into the "Title" search box has no effect, the...
Andreas Müller
12:48 PM feature request #6694: Migrate FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Please move the menu entry to "Term Editor" and there below "Ot...
Andreas Müller
12:47 PM feature request #6694 (Feedback): Migrate FeatureTreeEditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > When moving the Edtior with in the UI I got an IllegalAurgument...
Andreas Müller
12:15 PM Revision 202b97d1 (cdm-vaadin): ref #6719 renaming the TypeDesignationConverter to TypeDesignatio...
Andreas Kohlbecker
12:14 PM Revision b16e0506 (cdmlib): cdm light: add collation
Katja Luther
12:11 PM Revision 9f8c2953 (cdm-vaadin): ref #6719 updating documentation on the TypeDesignationConverter
Andreas Kohlbecker
11:05 AM Revision a7343965 (taxeditor): Merge branch 'develop' into featureTreeEditor
# Conflicts:
# eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/e4/FeatureTreeEditor.java
Patrick Plitzner
10:59 AM Revision 34fd7a1c (taxeditor): ref #6694 Extract composite and Listeners from FeatureTreeEditor
Patrick Plitzner
10:51 AM Revision fdb645e1 (cdm-vaadin): ref #6724 implementing SpecimenTypeDesignationWorkingSetDTO as ed...
- SpecimenTypeDesignation editor operates on SpecimenTypeDesignationWorkingSetDTO
- TypeDesignationConverter.TypeDe...
Andreas Kohlbecker
10:04 AM Revision a67200bf (cdmlib): csv light export: smaller changes in scientificName: year published a...
Katja Luther
09:49 AM Revision 7c83c6af (cdmlib): csv light export: smaller changes in specimen.locality and reference....
Katja Luther
09:16 AM Revision 34abc4b5 (taxeditor): Fix label generation for feature trees
Patrick Plitzner
09:16 AM Revision fa8f04ae (taxeditor): Remove unused classes
Patrick Plitzner
09:16 AM Revision 62165a66 (taxeditor): Add session to CharacterEditor
Patrick Plitzner
08:56 AM Revision 6bd4c0bd (cdmlib): ref #6730: minor
Katja Luther
08:56 AM Revision 74eabaa7 (cdmlib): ref #6730: first quick fix, to avoid deleting media referenced somewh...
Katja Luther

06/18/2017

10:41 PM Revision 2b559c4e (taxeditor): Integrate FeatureTreeEditor into CharacterEditor
Patrick Plitzner
09:28 PM Revision f12694a7 (taxeditor): Merge branch 'develop' into featureTreeEditor
Patrick Plitzner
09:27 PM Revision a2b47184 (taxeditor): Revert "Split up composites of FeatureTreeEditor"
This reverts commit 1cf4b0b27f381fc478f5e653d1fe969dd91d350d. Patrick Plitzner

06/17/2017

11:37 PM feature request #6694 (Resolved): Migrate FeatureTreeEditor
Andreas Müller

06/16/2017

03:46 PM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Please move the menu entry to "Term Editor" and there below "Others" separated with 2 separa...
Patrick Plitzner
03:16 PM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> Sometimes there is a bug when moving nodes. The node does not get deleted at the old positio...
Patrick Plitzner
02:59 PM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> If entering text into the "Title" search box has no effect, the text box should be disabled ...
Patrick Plitzner
02:58 PM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> When moving the Edtior with in the UI I got an IllegalAurgumentException (Message: null). Ti...
Patrick Plitzner
02:57 PM feature request #6694: Migrate FeatureTreeEditor
Andreas Müller wrote:
> If moving nodes in the tree everything seems to be saved immediately. This is unexpected beh...
Patrick Plitzner
03:45 PM Revision bc00fbdf (taxeditor): ref #6694 Move menu item to "Term Editor"
Patrick Plitzner
03:43 PM bug #6645 (Closed): area data parameter missing in portal/description/distributionInfoFor response
Saskia Gennrich
11:05 AM bug #6645: area data parameter missing in portal/description/distributionInfoFor response
Hi Saskia,
this is only a problem of missing data. After a fresh import the mapping between the names areas and th...
Andreas Kohlbecker
03:23 PM Revision 94681750 (taxeditor): ref #6694 Beautify alignment of feature tree editor
Patrick Plitzner
03:15 PM Revision f08ae629 (taxeditor): ref #6694 Remove moved feature node after drag and drop
Patrick Plitzner
02:49 PM Revision 4d98dfd9 (taxeditor): ref #6694 Implement selection propagation in feature tree editor
Patrick Plitzner
02:19 PM Revision f716539d (taxeditor): ref #6694 Set FeatureTree editor dirty after drag and drop
Patrick Plitzner
02:12 PM bug #6726 (Resolved): NPE in FactualDataView and feature selection does not show any entries in F...
Applied in changeset commit:taxeditor|87110d2e2f8e95f7fa3c0291a2a556c0a8364ef0. Patrick Plitzner
02:11 PM Revision 87110d2e (taxeditor): fix #6726 Use correct selection service for dynamic menu
Patrick Plitzner
12:40 PM Revision fed12afd (cdmlib): ref #6627 add error handling to CDM light export (II)
Andreas Müller
12:20 PM feature request #6737 (New): Make error message available in "Copy Error"
In error dialog the error message itself is not available when using "Copy Error". However it is shown in the text fi... Andreas Müller
12:17 PM task #6736 (New): Handle server not available user friendly
During an export that was interrupted by a restarting CdmServer I got the below error.
The message is difficult to...
Andreas Müller
12:16 PM bug #6733 (Resolved): NPE when trying to open Derivative Editor
Patrick Plitzner
11:57 AM bug #6733: NPE when trying to open Derivative Editor
To correctly test this you have to delete `{home}/.cdmLibrary/.metadata/.plugins/org.eclipse.e4.workbench/workbench.x... Patrick Plitzner
09:36 AM bug #6733 (Closed): NPE when trying to open Derivative Editor
~~~
login : admin
editor version : 4.8.0.201706072259
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
...
Patrick Plitzner
12:03 PM Revision 85fc6c9e (taxeditor): ref #6566 Re-enable "Edit" menu
Patrick Plitzner
11:43 AM Revision b8a2a1ad (cdmlib): ref #6627 add error handling to CDM light export
Andreas Müller
11:39 AM Revision bcc9b207 (cdm-vaadin): ref #6719 fixing bug releated to sorting
Andreas Kohlbecker
11:37 AM Revision 10f50c3f (taxeditor): ref #6733 Add model fragment to bin.includes
Patrick Plitzner
11:27 AM feature request #6735 (New): Collect all footnotes of a cdm_dataportal page and display it a the ...
Alle Footnotes unten auf der Seite sammeln, so dass diese nicht bei den einzelnen Feature-Blöcken, sondern gesammelt ... Andreas Kohlbecker
10:44 AM Revision 99634595 (cdmlib): ref #6645 logging missing wms layer mappings
Andreas Kohlbecker
10:24 AM Revision ba7612a0 (cdmlib): typo
Andreas Kohlbecker
10:24 AM Revision e22485ff (cdmlib): ref #6645 logging missing wms alyer mappings
Andreas Kohlbecker
10:24 AM Revision 6153f5c6 (taxeditor): Update molecular lib project description
Patrick Plitzner
09:54 AM Revision 38181dd6 (cdmlib): ref #6627 fix Taxon_FK Problem in OutputModelClassificationExport for...
Andreas Müller
09:40 AM Revision 9e1d7d77 (taxeditor): ref #6733 Set apply time of model fragment to "always"
Patrick Plitzner
09:36 AM Revision bb1d1762 (taxeditor): ref #6733 Make model fragment IDs unique
Patrick Plitzner
08:41 AM feature request #6732 (New): rank selector offering 2 filtered lists of ranks (default, all) for ...
The rank select should have a associated checkbox "Show all" which toggles the list of offered ranks.
Two filtered l...
Andreas Kohlbecker
08:26 AM feature request #6700 (Closed): Adapt dataportal to TaxonName model changes
Du bist aber hartnäckig ;-)
Ich habe das bewusst offengelassen weil ich mir nicht sicher war, ob es nicht doch noc...
Andreas Kohlbecker
08:20 AM feature request #6442: Feature block settings: margins for data in block level elements
The like this:
* see the "Notes" feature elements having no space: http://caryophyllales.org/nepenthaceae/cdm_data...
Andreas Kohlbecker

06/15/2017

11:59 PM Revision 0f93ffb4 (cdmlib): cleanup DwCA export
Andreas Müller
11:37 PM Revision a168db82 (cdmlib): cleanup
Andreas Müller
11:27 PM task #6717 (Resolved): Rename taxonNameBaseTitleCacheIndex and taxonNameBaseNameCacheIndex
Applied in changeset commit:cdmlib|866e99f0782680bda5f602139c7005a1d84915e1. Andreas Müller
11:27 PM Revision 866e99f0 (cdmlib): fix #6717 rename taxon name indexes
Andreas Müller
04:49 PM Revision 1e26b980 (cdmlib): remove ignore from IpniServiceTest
Andreas Müller
04:47 PM Revision 359f5fe8 (cdmlib): minor
Andreas Müller
04:26 PM task #6535 (Closed): MetaDataPropertyName from number to string in DB
Andreas Müller
04:25 PM task #6535: MetaDataPropertyName from number to string in DB
Finally this should be fixed now. Andreas Müller
04:02 PM task #6535: MetaDataPropertyName from number to string in DB
Update script for incorrect update
~~~ sql
UPDATE CdmMetaData SET PropertyName = 'TERM_VERSION' WHERE PropertyN...
Andreas Müller
04:21 PM Revision 6a88d3e5 (taxeditor): ref #6535 fix updated test H2 in taxeditor
Andreas Müller
04:21 PM Revision 5d0eae58 (taxeditor): ref #6535 fix updated test H2 in taxeditor
Andreas Müller
04:15 PM Revision a7b9fdeb (cdm-vaadin): ref #6535 fix updated test H2 in vaadin
Andreas Müller
04:09 PM Revision b1c49d20 (cdmlib): minor
Andreas Müller
04:09 PM Revision 2c71b889 (cdmlib): ref #6535 fix updated test H2 in cdmlib
Andreas Müller
03:51 PM feature request #6663 (Closed): Add required attributes to Reference to include externally manage...
The new field appear in the database so I think we can close this ticket. As the field should not be edited by users ... Andreas Müller
03:44 PM task #6731 (New): [DISCUSS] What information do we need to define the mapping used for data from ...
see #6663 for further details
AM: "Was wir vermutlich noch brauchen ist ein „Format“ oder „Mapping“ Feld, welches ...
Andreas Müller
03:24 PM bug #6480: Re-saved by cascade in specimen bulk editor
The original problem seems to be solved. So if above issues are not easy to fix please move to a new ticket and close... Andreas Müller
03:09 PM bug #6480: Re-saved by cascade in specimen bulk editor
I wonder if "Delete children" makes sense in bulk editor. This is a flat view. Users may not know what a "child" is. ... Andreas Müller
02:58 PM bug #6480: Re-saved by cascade in specimen bulk editor
Labels:
* "Delete Children" => "Delete **c**hildren", to be consistent
* Delete from "Described specimen" => ......
Andreas Müller
02:42 PM bug #6480 (Feedback): Re-saved by cascade in specimen bulk editor
There is a problem with the message displayed in Confirm Deletion dialog. Looks like i18n does not work correctly. Se... Andreas Müller
02:26 PM feature request #6607 (Closed): Implement WebSite.accessed in TaxEditor
Andreas Müller
01:57 PM feature request #6607: Implement WebSite.accessed in TaxEditor
Andreas Müller wrote:
> I guess we can close this ticket as all open issues are handled in #6658#note-11. I assume t...
Katja Luther
01:55 PM feature request #6607: Implement WebSite.accessed in TaxEditor
I guess we can close this ticket as all open issues are handled in #6658#note-11. I assume that fixing them there wil... Andreas Müller
02:23 PM feature request #6442 (Feedback): Feature block settings: margins for data in block level elements
Not sure anymore what this ticket is all about. Can you leave me a note how and what to test?
What exactly is mean...
Andreas Müller
02:16 PM feature request #5258 (Closed): Accessed field for WebPages
Tested also in TaxEditor and even titleCache update works fine. Close this ticket. Andreas Müller
02:14 PM feature request #6700: Adapt dataportal to TaxonName model changes
Again: can we close this ticket? Andreas Müller
01:51 PM feature request #6658 (Feedback): Make mediaCreated editable in Media view
It looks much better now.
Some smaller issues:
* ~~most important: if there is already data available the dial...
Andreas Müller
01:38 PM feature request #6527: Refactor delete configurator for media
The critical delete itself seems to work now. However, there is a very similar case described in #6730. Andreas Müller
12:41 PM feature request #6527: Refactor delete configurator for media
By the way, we may need the same configurator for "Image gallery delete". To me it looks like this currently does not... Andreas Müller
12:31 PM feature request #6527: Refactor delete configurator for media
If choosing "Delete media data, if not referenced by other data" now returns a kind of error saying that it is not po... Andreas Müller
12:22 PM feature request #6527: Refactor delete configurator for media
In German I would prefer "Wollen **S**ie die Mediendaten wirklich löschen?" statt "Wollen **S**ie wirklich die Medien... Andreas Müller
12:20 PM feature request #6527: Refactor delete configurator for media
Katja Luther wrote:
> This is done, but I used the term media data, because I think media record is also a technical...
Andreas Müller
12:14 PM feature request #6527 (Feedback): Refactor delete configurator for media
Andreas Müller wrote:

> By the way I would set the default to this option because I don't think people expect med...
Andreas Müller
01:33 PM bug #6730: Deleting media leads to inconsistent data
I also do not fully understand why only the 2 explicit usecases "TaxonDescription" and "SpecimenDescription" are hand... Andreas Müller
01:27 PM bug #6730 (New): Deleting media leads to inconsistent data
The same problem as described in #6527#note-6 also appears in media bulk editor if you try to delete a media that is ... Andreas Müller
01:22 PM bug #6664 (Closed): Deleting often does not succeed without throwing an exception
This fix was in the deleteHandler for all bulk editors, so it works for all bulkeditors Katja Luther
01:19 PM bug #6664 (Feedback): Deleting often does not succeed without throwing an exception
A first check looks fine. I only tested with Media. Is the fix for ALL bulk editors? If no, could you please implemen... Andreas Müller
01:18 PM Revision ed33cbd7 (taxeditor): ref #6527: change the labels for media deletion config and remove ...
Katja Luther
11:58 AM feature request #6661 (Closed): Add initials to Person
Andreas Müller
11:57 AM feature request #6661: Add initials to Person
WHK:
Bestätigung durch Nélida:
Maria del Carmen als M.d.C. abkürzen,
sonst ist eine andere Person gemeint.
Ha...
Andreas Müller
11:56 AM feature request #6661: Add initials to Person
AM: vielen Dank für die Antwort. Damit ist das alles schon richtig, da ich mir das auch so gedacht habe.
>Maria da...
Andreas Müller
11:55 AM feature request #6661: Add initials to Person
WGB:
bei allen Optionen muss man ja berücksichtigen, dass dies nur die automatischen Erzeugungen betrifft – man ka...
Andreas Müller
10:54 AM bug #6729 (New): NPE when closing the editor
While shut down tre editor following exception occurs:
~~~ text
!ENTRY org.eclipse.osgi 4 0 2017-06-15 10:43:29.1...
Katja Luther
09:39 AM Revision d3dc900f (taxeditor): add source reference string to excelImport wizard and missing imag...
Katja Luther
08:53 AM Revision ea1ed1f4 (cdm-vaadin): ref #6719 adapting test case
Andreas Kohlbecker
08:51 AM Revision b91daead (cdm-vaadin): ref #6719 cleaning up
Andreas Kohlbecker
08:24 AM Revision 1233268f (cdm-vaadin): ref #6719 better handling of case when statusType is null
Andreas Kohlbecker
07:48 AM Revision dc59a89a (cdm-vaadin): ref #6719 deterministic sortorder when base enitity is TaxonName ...
Andreas Kohlbecker

06/14/2017

12:58 AM feature request #6694: Migrate FeatureTreeEditor
Sometimes there is a bug when moving nodes. The node does not get deleted at the old position but is added at the new... Andreas Müller
12:54 AM feature request #6694: Migrate FeatureTreeEditor
If moving nodes in the tree everything seems to be saved immediately. This is unexpected behavior as users are used t... Andreas Müller
12:48 AM feature request #6694: Migrate FeatureTreeEditor
Layout: The search box is longer then the textbox for the data. It should be aligned. Andreas Müller
12:47 AM feature request #6694: Migrate FeatureTreeEditor
If entering text into the "Title" search box has no effect, the text box should be disabled for entering text. Andreas Müller
12:45 AM feature request #6694: Migrate FeatureTreeEditor
When moving the Edtior with in the UI I got an IllegalAurgumentException (Message: null). Title: "Could not get conve... Andreas Müller
12:37 AM feature request #6694: Migrate FeatureTreeEditor
Please move the menu entry to "Term Editor" and there below "Others" separated with 2 separators; and call in "Featur... Andreas Müller
12:27 AM feature request #6694 (Feedback): Migrate FeatureTreeEditor
Please check #6726 if these bugs are related to the changes in this ticket. Andreas Müller
10:24 PM feature request #6661: Add initials to Person
Hallo,
...
Das wichtigste Problem scheinen Klammern zu sein. Hier ein paar Beispiele:
========
Constantin (Ko...
Andreas Müller
10:23 PM Revision 5c3f30b9 (cdmlib): ref #6661 remove brackets from initials updater
Andreas Müller
05:31 PM feature request #6711 (Closed): Make initials editable in TaxEditor
Seems to work. Only cache update doesn't works sometimes in calling dialog/view. But this is a general issue not rela... Andreas Müller
05:11 PM bug #6728 (New): Changing author data when editing a reference does neither update the reference ...
How to reproduce:
* Create a taxon with NO secundum set
* Add a secundumg by creating a new generic reference w...
Andreas Müller
05:01 PM bug #6489 (Closed): Selection dialogs should not show the already selected elements for Synonym a...
I tested this. It works for the 3 given operations.
The ticket description says that ALL dialogs shoud be tested and...
Andreas Müller
05:00 PM feature request #6727 (New): Remaining selection dialogs that show already selected object
* SupplementalData - Sources - Reference
* SupplementalData - Credits - Agent
* SupplementalData - Rights - Agent
...
Andreas Müller
04:33 PM bug #6726 (Closed): NPE in FactualDataView and feature selection does not show any entries in Fac...
Clicking on "New" does not open submenu.
This might be related to changes in feature tree editor.
Also creating...
Andreas Müller
04:07 PM Revision 3ec391d3 (cdmlib): ignore IPNI preliminary
Andreas Müller
03:47 PM Revision cd5c1b5d (cdmlib): ref #6725 fix set(null) for kindOfUnit, Sex and LifeStage in DU facade
Andreas Müller
03:11 PM feature request #6658 (Resolved): Make mediaCreated editable in Media view
Andreas Müller
02:56 PM feature request #6658: Make mediaCreated editable in Media view
now there is a calendar widget to choose the date and the time.
The DateElement is used for DNAQualityCheck (qual...
Katja Luther
02:51 PM Revision 54b74722 (taxeditor): minor
Katja Luther
02:49 PM Revision 97623d1d (taxeditor): ref #6658: add calendar widget to dateElement
Katja Luther
01:26 PM feature request #6722: Make Life-form available via DerivedUnitFacade
WHK (personal communication): the main use-case is to distinguish benthos and plankton samples. Therefore having it o... Andreas Müller
01:23 PM feature request #6722: Make Life-form available via DerivedUnitFacade
Life-form is only needed for field units, this is correct. Wolf-Henning Kusber
01:23 PM bug #6725: Bug in DU facade for setting / retrieving kind of unit
Please review Andreas Müller
01:22 PM bug #6725 (Resolved): Bug in DU facade for setting / retrieving kind of unit
Applied in changeset commit:cdmlib|d30f87c51b80e150843d998d604fc4a0fd764cb2. Andreas Müller
11:57 AM bug #6725 (Resolved): Bug in DU facade for setting / retrieving kind of unit
Currently the setting the kind of unit for a derived unit it is stored in the derived unit. Only if the facade is a f... Andreas Müller
01:21 PM Revision d30f87c5 (cdmlib): fix #6725 correct handling and test for kindOfUnit handling in facade
Andreas Müller
11:08 AM bug #6303: distribution map is moving too fast
Hi Gabi, can you please review? The fix is also available in production now. Andreas Müller
11:03 AM bug #6582: status bar not completely visible
can we split this ticket? Andreas Müller
09:35 AM Revision c2032c42 (cdm-vaadin): ref #6719 fixing bug in name editor event
Andreas Kohlbecker
09:30 AM Revision ca1de09c (cdmlib): outputmodel add taxonFK to specimen facts table
Katja Luther

06/13/2017

03:23 PM Revision 92c19ccf (cdm-vaadin): fixing import missing after merge
Andreas Kohlbecker
03:21 PM Revision 13d4c29e (cdm-vaadin): Merge branch 'feature/#6687' into develop
Andreas Kohlbecker
03:19 PM Revision eeaf651a (taxeditor): ref #6390: fix display of misapplied names in name editor
Katja Luther
03:13 PM Revision b38e19e0 (cdm-vaadin): ref #6724 initial trunk implementation for a SpecimenTypeDesignat...
Andreas Kohlbecker
02:51 PM feature request #6607 (Feedback): Implement WebSite.accessed in TaxEditor
Same comment as #6662#note-8.
Maybe we can close these 2 tickets and open a new ticket instead that generally hand...
Andreas Müller
09:53 AM feature request #6607 (Resolved): Implement WebSite.accessed in TaxEditor
Katja Luther
02:44 PM feature request #6658 (Feedback): Make mediaCreated editable in Media view
Generally it works, but there is no check for correct format.
However, there are a couple of problems related to ...
Andreas Müller
01:20 PM feature request #6658: Make mediaCreated editable in Media view
the problem was that the start value of the mediaCreated field was not set correctly. It was saved but not displayed.... Katja Luther
12:37 PM feature request #6658: Make mediaCreated editable in Media view
Sorry maybe it was too early to pass to assign to me. With current version the media is not yet stored in DB and even... Andreas Müller
11:34 AM feature request #6658 (Resolved): Make mediaCreated editable in Media view
Applied in changeset commit:taxeditor|6430b43e4a5e3def3a2778bf51f5114606cda156. Katja Luther
01:27 PM bug #6627: Remaining output model issues
Katja Luther wrote:
> * Instance name and instance ID
>
> * TitlePageYear
>
> * ~~Collation: Wird nicht ausgeg...
Katja Luther
01:19 PM bug #6664: Deleting often does not succeed without throwing an exception
Applied in changeset commit:taxeditor|eb057b290c3a0f9c34066b5392657ce2dfc00e9b. Katja Luther
12:56 PM bug #6664 (Resolved): Deleting often does not succeed without throwing an exception
Katja Luther
12:56 PM bug #6664 (Feedback): Deleting often does not succeed without throwing an exception
The deleteHandler used the offset and length to get the annotation from the model to set it markedForDeletion, but th... Katja Luther
12:53 PM bug #6664 (Resolved): Deleting often does not succeed without throwing an exception
Applied in changeset commit:taxeditor|9efc697ec714f60e08bf87f84fb1b509d35d2780. Katja Luther
01:18 PM Revision eb057b29 (taxeditor): fix #6664: set value of mediaCreated correctly
Katja Luther
12:53 PM Revision 9efc697e (taxeditor): fix #6664: fix delete in bulkeditor
Katja Luther
12:41 PM Revision 4e9b792e (cdmlib): fix NPE in WebPage cache strategy
Andreas Müller
12:05 PM feature request #6724 (Feedback): Popup Editor for SpecimenTypeDesignation Workingsets

This is a schematic concept for the editor UI
![](TypeFormPhycobank_v2_ak.png)
## Types Editor Component
...
Andreas Kohlbecker
12:04 PM feature request #6719 (Closed): Compact display of TypeDesignations in RegistrationItems with edi...
Andreas Kohlbecker
12:01 PM Revision cb4d176d (cdm-vaadin): ref #6719 RegistrationItemEditButtons active; Chooser for new typ...
Andreas Kohlbecker
11:53 AM Revision 8cc1e287 (cdmlib): ignore IPNI preliminary
Andreas Müller
11:51 AM Revision 8adb7643 (cdmlib): ref #6722 implement life-form in derived unit facade
Andreas Müller
11:51 AM Revision 4e3f1cdc (cdmlib): ref #6368 remove commented all TaxonName subclasses completely
Andreas Müller
11:40 AM Revision 6fc933f1 (taxeditor): remove unused imports
Katja Luther
11:35 AM feature request #6722: Make Life-form available via DerivedUnitFacade
Hi Henning, is it correct that life-form is only needed for field units, not preserved specimen? Just like ecology a... Andreas Müller
11:34 AM feature request #6722: Make Life-form available via DerivedUnitFacade
implemented in facade Andreas Müller
11:33 AM Revision 6430b43e (taxeditor): fix #6658: add mediaCreated date field
Katja Luther
11:00 AM Revision 79295d9d (cdm-vaadin): ref #6719 RegistrationItems with edit buttons for name and per ty...
Andreas Kohlbecker
10:48 AM Revision b3b57703 (taxeditor): minor
Katja Luther
10:45 AM Revision 2486dc52 (taxeditor): minor
Katja Luther
10:32 AM Revision a172dbf0 (taxeditor): revert richtext elements
Katja Luther
10:30 AM Revision f6c9e1f7 (taxeditor): revert MANIFEST changes for richtext editor
Katja Luther
09:58 AM Revision 1410780e (cdmlib): ref #6719 DerivedUnitFacadeCacheStrategy can skip fieldUnits
Andreas Kohlbecker
09:36 AM Revision 3fb1dc00 (taxeditor): add warning for referencing objects in all agent detail elements
Katja Luther
09:32 AM Revision a50e3be7 (cdm-vaadin): ref #6719 introducing TypeDesignationWorkingSet with string repre...
Andreas Kohlbecker
09:08 AM Revision 70e986c5 (cdmlib): outputmodel reference title for books
Katja Luther
08:40 AM Revision b0775553 (cdm-vaadin): ref #6719 skipping fieldunit during cache generation
Andreas Kohlbecker

06/12/2017

12:17 AM Revision 22d82e8b (cdm-vaadin): ref #6719 improved TypeDesignationConverter
Andreas Kohlbecker
04:52 PM feature request #6723 (New): Make available derived unit facade elements configurable in DerivedU...
... similar to configurable elements in NameDetailsView Andreas Müller
04:50 PM feature request #6722 (New): Make Life-form available via DerivedUnitFacade
... but probably as an optional element (preferences) as it is relevant only for e.g. algae.
~~First implement in ...
Andreas Müller
04:47 PM feature request #6721 (New): Show kindOfUnit, Sex and Lifestage also for DerivedUnits in DUFacade
... currently they are shown only for the field unit.
We first need to change this in the DerivedUnitFacade and th...
Andreas Müller
04:44 PM feature request #6720 (New): Make individualCount a string
Currently it is integer, but usually one needs something like 3M,4W Andreas Müller
03:02 PM Revision 55603743 (taxeditor): ref #6607: add accessed field to reference detail element
Katja Luther
02:53 PM Revision 18d660e0 (cdmlib): fix specimen fact export
Katja Luther
02:28 PM Revision 844f7175 (taxeditor): fixed rcp target
Katja Luther
01:40 PM Revision 4e0052e3 (cdm-vaadin): ref #6719 refactoring and better test
Andreas Kohlbecker
01:39 PM feature request #6719 (In Progress): Compact display of TypeDesignations in RegistrationItems wit...
Andreas Kohlbecker
01:38 PM feature request #6719 (Closed): Compact display of TypeDesignations in RegistrationItems with edi...
* type designations grouped and "deduplicated" by FieldUnit or TypifyingName
* Button to open SpecimenTypeDesignatio...
Andreas Kohlbecker
12:29 PM bug #6718 (New): Constistent TypeDesignation representation creation
Various representations of TypeDesignations are needed in the edit platform components.
* cdm-dataportal
* #596...
Andreas Kohlbecker
11:54 AM Revision de625740 (cdm-vaadin): ref #6169 RegistrationItem separate name button + action for type...
Andreas Kohlbecker
11:51 AM Revision c1c5eeb7 (cdm-vaadin): ref #6687 reverting hibernate.event.merge.entity_copy_observer to...
Andreas Kohlbecker
10:26 AM Revision 3dfcbfee (cdmlib): minor
Katja Luther
10:02 AM Revision cbcb3b1b (cdmlib): changes for outputmodel: encoding, shortCitation
Katja Luther

06/10/2017

06:46 PM task #6717 (Resolved): Rename taxonNameBaseTitleCacheIndex and taxonNameBaseNameCacheIndex
In existing databases and in code Andreas Müller
10:00 AM task #6716 (New): Better handling for UserTypes in hibernate
Maybe there is a better way now to use UserTypes. I got the idea when reading
https://developer.jboss.org/message/...
Andreas Müller
09:51 AM task #6715 (New): Can we make better use of hibernate tools?
http://tools.jboss.org/features/hibernate.html
Maybe also related: JBoss Tools: http://tools.jboss.org/downloads/...
Andreas Müller
09:03 AM task #6714 (New): Create 001-cdm.h2.sql automatically
Some links I found:
* How to generate Envers database schema with org.hibernate.tool.EnversSchemaGenerator? https...
Andreas Müller

06/09/2017

05:41 PM feature request #6711 (Resolved): Make initials editable in TaxEditor
Applied in changeset commit:taxeditor|48bf21fce3a4cf4fe0f0c965302dcdf28fe7a252. Katja Luther
05:41 PM Revision 48bf21fc (taxeditor): fix #6711: add initials to person detailelement
Katja Luther
05:35 PM feature request #6390 (New): Details view for misapplied names
Details View:
• ~~Err. Secundum bitte groß schreiben~~
• ~~„TaxonRelationship Misappl. doubtful“ bitte “TaxonRelati...
Katja Luther
05:28 PM feature request #6390 (In Progress): Details view for misapplied names
Andreas Müller
04:48 PM feature request #6390: Details view for misapplied names
AM
~~~
Details View:
• ~~Err. Secundum bitte groß schreiben~~
• ~~„TaxonRelationship Misappl. doubtful“ bitte...
Andreas Müller
05:32 PM Revision af7453f9 (taxeditor): ref #6390: add all name related parts to details view of misapp
Katja Luther
05:27 PM feature request #6527 (Resolved): Refactor delete configurator for media
Andreas Müller
04:28 PM feature request #6527: Refactor delete configurator for media
please review Katja Luther
04:27 PM feature request #6527: Refactor delete configurator for media
Andreas Müller wrote:
> >· Die Option „Lösche das Medianobjekt, auch wenn es von einem Specimen verwendet wird“ vers...
Katja Luther
04:23 PM feature request #6527: Refactor delete configurator for media
Andreas Müller wrote:
> I just realized that also in the Media bulk editor CRITICAL things happen. Even if you do NO...
Katja Luther
05:21 PM Revision b2808f0f (taxeditor): ref #6390: minor changes
Katja Luther
05:08 PM Revision 4585a268 (taxeditor): ref #6390: missed to commit the changes for NameEditor
Katja Luther
04:22 PM Revision b0277a63 (taxeditor): ref #6527: adapt delete operation to show up error dialog
Katja Luther
04:18 PM Revision 3df8a478 (cdmlib): ref #6527: fix isDeletable method for media
Katja Luther
03:21 PM Revision 5bfd7f27 (taxeditor): set CHECK to IMPORT_WITHOUT_CHECK for updater
Katja Luther
03:02 PM Revision 3e5a737e (taxeditor): minor
Katja Luther
02:35 PM feature request #6713: Remember last recently used file path for imports and exports
Hallo,
das wiederholte Eingeben des Pfades beim Export ist etwas mühsam – kann man sich das lokal (aber datenbankspe...
Andreas Müller
02:35 PM feature request #6713 (New): Remember last recently used file path for imports and exports
The path (maybe not the file itself) should be saved as preference. This should be separate for each database connect... Andreas Müller
02:30 PM Revision 6b626831 (taxeditor): add ITaxonEditor interface for getting taxon in store package
Katja Luther
02:26 PM Revision 0ce3d8a7 (taxeditor): fix jenkins
Katja Luther
02:21 PM Revision effadce1 (cdmlib): outputmodel export specimen facts
Katja Luther
02:04 PM Revision c5ed01f6 (taxeditor): ref #6390: revert some changes and add DetailsViewPart changes
Katja Luther
01:56 PM Revision eba15c11 (taxeditor): revert richtext parts
Katja Luther
01:44 PM feature request #6712 (New): [DISCUSS] Should we remove anamorph from TaxonName (Fungi)
According to Melbourne Code anamorph should not be used anymore, or do we need it for older data.
"One fungus, o...
Andreas Müller
01:35 PM Revision 5aeabe43 (cdmlib): minor in Outputmodelexport (common names and distributions)
Katja Luther
01:22 PM Revision 5a6c3028 (taxeditor): smaller changes for io result display and configuration of exports...
Katja Luther
01:22 PM Revision 9a5a83e1 (taxeditor): ref #6390: adapt details view for misapplied names
Katja Luther
12:58 PM Revision 9ff78ae1 (cdmlib): small fixes in sortindex updater
Katja Luther
12:58 PM Revision ce57ae90 (cdmlib): changes in excelImport base
Katja Luther
12:58 PM Revision 3cde9aa8 (cdmlib): changes in TaxonExcelImport
Katja Luther
12:58 PM Revision 572a0d71 (cdmlib): changes in outputmodel
Katja Luther
12:55 PM Revision af0c21a2 (cdm-vaadin): ref #6169 disabling registration workflow tabsheet
Andreas Kohlbecker
12:30 PM Revision d39f4e8f (cdm-vaadin): ref #6169 button tooltips
Andreas Kohlbecker
12:24 PM Revision d574f7e6 (cdm-vaadin): ref #6169 TeamOrPersonField with buttons to remove and add Person...
Andreas Kohlbecker
11:51 AM feature request #6588: Add URL and URL comment to OriginalSource / ExternalLink
started now to implement as a new class ExternalLink Andreas Müller
11:32 AM Revision d3be16a7 (cdm-vaadin): ref #6169 add, remove, move buttons in ToManyRelatedEntitiesListS...
Andreas Kohlbecker
10:56 AM feature request #6700: Adapt dataportal to TaxonName model changes
is this still an open issue? Andreas Müller
09:48 AM feature request #6581 (In Progress): Make all microreferenced references OriginalSources
Andreas Müller

06/08/2017

01:00 AM feature request #6711 (Closed): Make initials editable in TaxEditor
Persons do now have a new field initials. This should be editable in TaxEditor Andreas Müller
12:17 AM Revision 3b911631 (cdm-vaadin): ref #6169 fixing width
Andreas Kohlbecker
07:55 PM feature request #6703: Improve title handling for media in dataportal
I think this is fixed. Can you provide changeset and set on resolved? Andreas Müller
05:45 PM feature request #6624 (Closed): Campanula related portal issues
Closed because all single issues have their own ticket Patrick Plitzner
05:43 PM feature request #6710 (New): Add default value to thumbnail label for specimen scans
default value could follow the order barcode of specimen > "scan x"
motif can often be empty because it is always ...
Patrick Plitzner
05:41 PM feature request #6709 (New): Do not show UUID on media site
Example: http://campanula.e-taxonomy.net/cdm_dataportal/media/ac44e4b5-4820-46bc-820e-9e414c6b52e7
media site is o...
Patrick Plitzner
05:39 PM feature request #6708 (New): Open images from specimen table in separate tab and in a viewer
Patrick Plitzner
04:40 PM Revision 3bde0f02 (cdm-vaadin): solving compilation probelm due to class literal with type parame...
Andreas Kohlbecker
04:27 PM Revision 2c2bbc38 (cdm-vaadin): ref #6707 1st attempt to make editing transient properties possib...
Andreas Kohlbecker
04:26 PM bug #6707 (New): transient properties managed by ToManyRelatedEntitiesListSelect are not updated ...
The TaxonNamePopupEditor uses a ToManyRelatedEntitiesComboboxSelect to mallow editing the associations to basionym na... Andreas Kohlbecker
03:23 PM bug #6666 (Closed): Exception in SearchResultView when starting the Taxeditor
For search this seems to be fully fixed. I still get it sometimes for a database I probably never connected to with e... Andreas Müller
03:14 PM feature request #6656 (Closed): Make autonym hybrids parsable
All examples do parse correctly in the TaxEditor so I close this ticket. Andreas Müller
01:39 PM feature request #6656 (Resolved): Make autonym hybrids parsable
Applied in changeset commit:cdmlib|8b7f15a55fb9e9f229d4729ee0d82b1ccec6318b. Andreas Müller
10:16 AM feature request #6656 (Feedback): Make autonym hybrids parsable
In the TaxEditor parsing still does not work. Andreas Müller
03:11 PM bug #6669 (Closed): Duplicate menu items in several views and editor
I tested the TaxEditor a lot today and i never had. Also explicit on this issue did not find any duplicated menus. Se... Andreas Müller
02:37 PM bug #6664 (Feedback): Deleting often does not succeed without throwing an exception
It is better already but 2 things still happen.
1) If the cursor is at the end of the above described problem stil...
Andreas Müller
02:22 PM feature request #6527: Refactor delete configurator for media
I just realized that also in the Media bulk editor CRITICAL things happen. Even if you do NOT check "Delete the media... Andreas Müller
10:10 AM feature request #6527: Refactor delete configurator for media
>· Die Option „Lösche das Medianobjekt, auch wenn es von einem Specimen verwendet wird“ verstehe ich nicht ganz. Welc... Andreas Müller
09:50 AM feature request #6527 (Feedback): Refactor delete configurator for media
> „Medienobjekt“ finde ich keinen so glücklichen Begriff. Besser Mediendatensatz? Objekt klingt so nach dem eigentlic... Andreas Müller
01:38 PM Revision 8b7f15a5 (cdmlib): fix #6656 autonym hybrid parsing with parseReference
Andreas Müller
01:15 PM Revision 825e3afb (cdmlib): ref #6535 fix calls to version number from other places
Andreas Müller
12:17 PM Revision d7e9db79 (cdm-vaadin): ref #6169 removing grid view from ListViewBean
Andreas Kohlbecker
12:09 PM Revision 1952d4c7 (cdm-vaadin): ref #6169 documenting bean nesting in ToManyRelatedEntitiesListSe...
Andreas Kohlbecker
12:03 PM Revision 532beab7 (cdm-vaadin): ref #6169 fixing missing set value in ToManyRelatedEntitiesCombob...
Andreas Kohlbecker
12:01 PM Revision 1103009f (cdm-vaadin): ref #6169 basionymToggle moved to top and has correct initial state
Andreas Kohlbecker
11:14 AM bug #6657 (Feedback): Reproducable "multiple representations" exception for polytomous keys
In most cases this seems to work now. However I still have multiple strange behaviors with key "KomplexKey" on edit-t... Andreas Müller
11:12 AM bug #6706 (New): Sometimes selected taxa are not synchronized in PolytomousKey Editor
**Sometimes** when trying to add a taxon to a PolytomousKeyNode the selection works fine, the taxon is also shown in ... Andreas Müller
10:47 AM Revision 1cf4b0b2 (taxeditor): Split up composites of FeatureTreeEditor
Patrick Plitzner
10:23 AM Revision b6ea271c (cdm-vaadin): ref #6169 ToManyRelatedEntitiesComboboxSelect, CdmFilterablePagin...
Andreas Kohlbecker
09:37 AM bug #6446 (Closed): Merge botanical and zoological names into TaxonNameBase in external applications
Should be fixed as it compiles and tests run. Most critical was the dataportal but also these tests run again. Andreas Müller
09:36 AM task #6445 (Closed): Remove occurrence of NonViralName in external applications (TaxEditor etc.)
Should be fixed as it compiles and tests run. Andreas Müller
09:31 AM bug #6530 (Closed): After editing a nomenclatural reference of a new created name some informatio...
Looks fine now. And it seems to be the correct way to always store all data edited in a dialog. Andreas Müller
09:30 AM bug #6502 (Resolved): LIE during request to portal/classification/{uuid}/pathFrom/{taxonNodeUUID}...
Applied in changeset commit:cdmlib|c8363cf59437e3c1e98ecbeddb3e931d8e50dcad. Andreas Kohlbecker
09:30 AM Revision c8363cf5 (cdmlib): fix #6502 reloading supplied term in service to avoid LIE
Andreas Kohlbecker
09:24 AM bug #6570 (Closed): rank list should be sorted
Looks fine now. Andreas Müller
08:38 AM feature request #6368 (Closed): Merge all TaxonNameBase classes, remove DTYPE, rename table
Andreas Müller
08:35 AM feature request #3734 (Closed): Stop separating term and schema update
Andreas Müller
08:35 AM Revision 2a5116af (cdmlib): minor
Andreas Müller
08:31 AM Revision 65fbcddb (cdmlib): ref #3734 remove ITermUpdaterStep.java and ITermUpdater
Andreas Müller
08:21 AM feature request #6617 (Closed): Add "Exact Value" to StatisticalMeasure
Exists in test databases Andreas Müller
08:18 AM task #6660 (Closed): Remove unique index from Rights MN tables
Andreas Müller
08:12 AM task #6226 (Closed): Delete orphaned key nodes
I checked with
~~~ sql
SELECT *
FROM PolytomousKeyNode pkn
WHERE pkn.key_id NOT IN (SELECT id FROM PolytomousKe...
Andreas Müller
08:11 AM bug #6705 (New): Remove remaining orphaned PolytomousKeyNodes
There are PKN left that are linked to an existing key but have no parent but link to a taxon (so are no root nodes).
...
Andreas Müller
07:41 AM bug #6340 (Closed): Update script for nomenclatural status types
I checked on test server for negative results with
~~~ sql
SELECT st.id
FROM NomenclaturalStatus st
INNER JOI...
Andreas Müller
07:29 AM feature request #6367 (Closed): Make NomenclaturalCode an attribute ("type") of TaxonNameBase
Andreas Müller
07:27 AM feature request #5817 (Closed): Rename RelationshipTermBase_inverseRepresentation
Andreas Müller
07:27 AM bug #5149 (Closed): Remove UNIQUE index on Sequence_Reference.citations_id column
Andreas Müller
07:23 AM bug #6192: taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is en...
Is there a reason why this is assigned to me? Also the status could be changed from Feedback to ? maybe? Andreas Müller

06/07/2017

11:06 PM task #6606: Import Bogota specimen data
AM:
>Type: Manchmal nur „Type“ ohne genaueren Typ. Ok? Kann man immer davon ausgehen, dass es sich um den Typus z...
Andreas Müller
11:06 PM task #6606: Import Bogota specimen data
Frage: waren das alle derzeit relevanten Belege oder ist das nur ein Auszug?
Außerdem die Antworten zu den Fragen:...
Andreas Müller
11:05 PM task #6606: Import Bogota specimen data
Hallo Grischa, Walter,
vielen Dank für die Daten. Habe sie überflogen. Sieht ziemlich gut aus. Unten Anmerkungen z...
Andreas Müller
06:56 PM Revision b825b594 (cdm-dataportal): ref #6700 adapting test to TaxonName related model change
Andreas Kohlbecker
06:44 PM task #6702 (Rejected): Post release 4.8.0 tasks
changing the name part definitions is no longer needed since commit:c2545e1c Andreas Kohlbecker
03:09 PM task #6702 (Rejected): Post release 4.8.0 tasks

## 1. check name render part definitions
The name render part definitions have changed #6700 and need to be upda...
Andreas Kohlbecker
06:42 PM Revision c2545e1c (cdm-dataportal): ref #6700 using nameType to distinguish name render part defi...
Andreas Kohlbecker
06:16 PM feature request #6704 (New): Make profile picture clickable and opening in lightbox
This is a requirement for Flora of Greece. The result should be the same as clicking on a picture in the image gallery. Andreas Müller
05:18 PM Revision e251b6d6 (cdm-dataportal): ref #6700 partially reverting 102f8c26 (updating default name...
Andreas Kohlbecker
05:04 PM feature request #6703 (New): Improve title handling for media in dataportal
Currently the dataportal prefers to display IPTC "Object Name" rather than CDM.Media.title.
The required preferenc...
Andreas Müller
05:01 PM Revision 128e8a65 (cdm-dataportal): fixing order of media title sources
Andreas Kohlbecker
03:40 PM Revision ded94939 (cdm-vaadin): ref #6169 fixing NPE
Andreas Kohlbecker
03:39 PM Revision ea9daa81 (cdm-vaadin): ref #6169 renaming FieldListEditor to ToManyRelatedEntitiesListSe...
Andreas Kohlbecker
03:26 PM Revision e3619281 (taxeditor): minor changes
Patrick Plitzner
03:01 PM Revision 102f8c26 (cdm-dataportal): ref #6700 updating default name render part definitions and a...
Andreas Kohlbecker
02:31 PM bug #6701 (Duplicate): Add new media does not work in specimen editor
Details View says "No media attached" Patrick Plitzner
01:41 PM Revision b20f6a5f (cdm-dataportal): ref #6700 adapting annotation fetch function to merged TaxonN...
Andreas Kohlbecker
01:38 PM feature request #6700 (In Progress): Adapt dataportal to TaxonName model changes
Andreas Kohlbecker
01:38 PM feature request #6700 (Closed): Adapt dataportal to TaxonName model changes
Andreas Kohlbecker
12:41 PM task #6699 (New): Delete term version from CdmMetaData
It is not needed anymore
Also remove from FirstDataInserterTest.testBlankDB-result.xml
Andreas Müller
12:35 PM Revision 1e46b56e (cdmlib): minor
Andreas Müller
12:30 PM Revision 730d4da6 (cdmlib): ref #6535 fix strange bug in SQL that reads all records from CdmMetaD...
Andreas Müller
12:10 PM Revision 10cc56c0 (taxeditor): Merge branch 'develop' into featureTreeEditor
# Conflicts:
# eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/e4/FeatureTreeEditor.java
Patrick Plitzner
12:04 PM feature request #6694 (Resolved): Migrate FeatureTreeEditor
Patrick Plitzner
12:02 PM Revision 47aa3510 (taxeditor): Merge branch 'ticket#6694' into develop
Patrick Plitzner
11:48 AM Revision 1da48f51 (cdmlib): fix compile error in common service
Andreas Müller
11:45 AM Revision 4aca5046 (taxeditor): ref #6694 Remove wizard pages and plugin configurations
Patrick Plitzner
11:11 AM Revision d455719e (taxeditor): ref #6694 Set pattern when creating a new feature tree
Patrick Plitzner
10:59 AM Revision cc4535d4 (taxeditor): ref #6694 Improve UI and feature tree creation
Patrick Plitzner
10:28 AM Revision f2652c39 (cdmlib): ref #6535 fix update script for renaming CdmMetaData.propertyName and...
Andreas Müller
10:22 AM bug #6698 (New): Check all imports if the importResult is filled correctly
Katja Luther
10:14 AM feature request #6697 (New): reconstruct getReferencingObjects to return DTOs
the most expensive part of the referencing objects view is the creation of the lables. Therefore it would be better t... Katja Luther
09:41 AM Revision c3794190 (cdmlib): add check for existence of merge objects
Katja Luther

06/06/2017

01:30 AM task #6696 (New): Improve architecture for Model updates
Some issues make model update work intensive and should be improved:
* Vaadin and TaxEditor still have their own ...
Andreas Müller
01:19 AM feature request #2949 (Duplicate): Simplify TaxonName classes
Andreas Müller
05:28 PM Revision 8c3fb210 (cdm-vaadin): fixing test case
Andreas Kohlbecker
03:32 PM Revision 880044bc (taxeditor): ref #6694 Handle dirty state when adding/removing features
Patrick Plitzner
02:59 PM feature request #3533: Prefill nomenclatural reference information if possible
Hallo Katja,
diese Funktion sollte nur diejenigen Referenzen liefern, bei denen Greuter der alleinige Autor ist. I...
Katja Luther
02:41 PM Revision 5ce82a07 (taxeditor): ref #6694 Implement Feature Tree Editor
Patrick Plitzner
02:21 PM Revision 4610de84 (cdm-vaadin): Merge branch 'phycobank' into develop
Conflicts:
src/main/java/eu/etaxonomy/cdm/mock/Registration.java
src/main/java/eu/etaxonomy/cdm/mock/Registratio...
Andreas Kohlbecker
02:16 PM Revision 549745ac (taxeditor): update hibernate mapping in TaxEditor and update cached model
Andreas Müller
02:03 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
and this is the log of the successful push:
~~~
andreas ~/workspaces/cdm/cdm-vaadin [feature/#6687 ✓][13:07:30]
...
Andreas Kohlbecker
01:32 PM Revision 2ffb3ef3 (taxeditor): Add missing switch statement
Patrick Plitzner
01:28 PM Revision c5b4e6a6 (taxeditor): Update name of target platform to "neon"
Patrick Plitzner
01:07 PM Revision 2a3d1ef0 (cdm-vaadin): ref #6687 attempt to get rid of the hibernate.event.merge.entity_...
Andreas Kohlbecker
01:05 PM bug #6687 (In Progress): Multiple representations of the same entity merge problem
Hi Andreas,
I fully agree, this is too risky for a long term solution, but I haven't found a solution to the probe...
Andreas Kohlbecker
01:02 PM bug #6687: Multiple representations of the same entity merge problem
Hi Andreas,

diese Lösung könnte ziemlich riskant sein. Wir haben dieses Problem ja regelmäßig im TaxEditor und es...
Andreas Kohlbecker
12:59 PM Revision 5f470a91 (cdm-vaadin): TODO notes
Andreas Kohlbecker
12:52 PM Revision db71ee04 (cdmlib): ref #6695, ref #5302 reverting commit 6c3443469
Andreas Kohlbecker
12:40 PM Revision 3fd94ffc (cdmlib): adding missing delete method to CommonServiceImpl
Andreas Kohlbecker
12:40 PM Revision c9369086 (cdmlib): ref #6169 adding getService() method to CdmRepository
Andreas Kohlbecker
12:32 PM bug #6695 (New): module cdmlib/services should not be an osgi bundle
the module cdmlib/services has been configured as osgi bundle product:
~~~xml
<packaging>bundle</packaging>
...
...
Andreas Kohlbecker
12:03 PM feature request #6694 (Feedback): Migrate FeatureTreeEditor
This should also be implemented or moved outside of the preferences Patrick Plitzner
11:58 AM Revision 86851039 (taxeditor): Delete unused class and fix potential NPE
Patrick Plitzner
11:57 AM Revision da93b6de (cdm-vaadin): ref #6368 adapting cdm-vaadin to new TaxonName model
Andreas Kohlbecker
11:44 AM Revision 94deaeec (cdm-vaadin): switching to 4.8.0-SNAPSHOT
Andreas Kohlbecker
11:38 AM feature request #6693 (New): Implement missing nomenclatural codes for name detail element
in class `eu.etaxonomy.taxeditor.ui.section.name.NameDetailElement`
~~~
private void createSpecificNameParts(ICdm...
Patrick Plitzner
11:00 AM Revision e14a8c4a (cdmlib): adding missing delete method to CommonServiceImpl
Andreas Kohlbecker
11:00 AM Revision 582cd24e (cdmlib): ref #6169 adding getService() method to CdmRepository
Andreas Kohlbecker
10:56 AM Revision 66835887 (taxeditor): Merge branch 'develop' into featureTreeEditor
Patrick Plitzner
10:05 AM Revision 34d765c2 (taxeditor): adapt Taxeditor test data to model update
Andreas Müller
02:10 AM Revision 3989c417 (cdmlib): ref #6661 some final updates for addInitials to person (length = 80 +...
Andreas Müller

06/05/2017

12:01 AM feature request #6368: Merge all TaxonNameBase classes, remove DTYPE, rename table
Applied in changeset commit:cdmlib-apps|76015c3280374e0812ff99a887000483be80f18d. Andreas Müller
12:00 AM Revision e53beea2 (cdmlib-apps): Merge branch 'feature/cdm-4.7#6368'
Andreas Müller
11:58 PM Revision 2cab5074 (cdmlib-apps): latest FloraHellenica changes and CyprusImage import
Andreas Müller
10:42 PM Revision 52a59b6e (cdm-vaadin): adapt vaadin to model changes 4.7
Andreas Müller
09:21 PM Revision c7fb7fbd (taxeditor): update taxeditor test H2 to model 4.7
Andreas Müller
09:05 PM Revision 42b7ab89 (cdmlib): cleanup
Andreas Müller
09:05 PM Revision e8023b87 (cdmlib): fix hibernate search index path issue for remote-webapp tests
Andreas Müller
08:37 PM Revision 0bd9db14 (cdm-vaadin): update test schema and test database for vaadin
Andreas Müller
08:26 PM Revision abda60cf (cdmlib): minor changes to TcsRdf import
Andreas Müller
08:13 PM Revision ac5bdc06 (cdmlib): ref #5817 update test data for rename RelationshipTermBase_inverseRep...
Andreas Müller
06:54 PM Revision a20d434a (cdmlib): update remote-webapp test H2 DB and some minor changes
Andreas Müller
06:35 PM Revision 126e4675 (cdmlib): ref #6258, #6535, #3734 some updates to CdmUpdater after checking ag...
Andreas Müller
05:08 PM feature request #6361 (Resolved): [MASTER] Merge all TaxonName classes into 1 class
Andreas Müller
05:01 PM bug #5149 (Resolved): Remove UNIQUE index on Sequence_Reference.citations_id column
Applied in changeset commit:cdmlib|06a9799d6b7ccdd74054489773c13c40539ae5e2. Andreas Müller
05:01 PM feature request #6472 (Resolved): Include keys as target for IntextReferences
Applied in changeset commit:cdmlib|4afd76e7642b5d023dfb9a07bad56d5c05072c81. Andreas Müller
05:01 PM feature request #5817 (Resolved): Rename RelationshipTermBase_inverseRepresentation
Applied in changeset commit:cdmlib|696ecfe85f0a850183b534601f631c9c988d81e0. Andreas Müller
05:01 PM bug #6340 (Resolved): Update script for nomenclatural status types
Applied in changeset commit:cdmlib|8947f6981e84e4f6434b7fdcf7eac1fef6b67882. Andreas Müller
05:00 PM Revision 06a9799d (cdmlib): fix #5149 remove UNIQUE index on Sequence_Reference.citations_id column
Andreas Müller
04:52 PM task #6226 (Resolved): Delete orphaned key nodes
Andreas Müller
04:48 PM task #6226: Delete orphaned key nodes
Also need to delete orphaned key statements Andreas Müller
04:51 PM Revision 38dc3727 (cdmlib): fix #6226 delete orphaned keys and key statements
Andreas Müller
03:28 PM Revision 696ecfe8 (cdmlib): fix #5817 rename RelationshipTermBase_inverseRepresentation
Andreas Müller
03:07 PM Revision 8947f698 (cdmlib): fix #6340 update incorrect 'invalid' nomenclatural states
Andreas Müller
01:10 PM Revision 4afd76e7 (cdmlib): fix #6472 add key as target for IntextReference
Andreas Müller
12:31 PM Revision e46ded05 (cdmlib): ref #3665 adapt orginal spelling name cache strategy to user wishes, ...
Andreas Müller
12:06 PM feature request #5258 (Resolved): Accessed field for WebPages
Applied in changeset commit:cdmlib|2f9732022e97eb872bef7beba334c1696ee62b7d. Andreas Müller
12:06 PM Revision 2f973202 (cdmlib): fix #5258 add accessed to WebPage cache strategy
Andreas Müller
11:01 AM Revision 6b381b7d (cdmlib): ref #6368 remove some further occurrences of ITaxonNameBase
Andreas Müller
10:34 AM bug #6409 (Closed): Fix failing Level3 validation in ValidationTest introduced by removing TaxonN...
Andreas Müller
10:34 AM bug #6409 (Resolved): Fix failing Level3 validation in ValidationTest introduced by removing Taxo...
Applied in changeset commit:cdmlib|5734eafe6399bc0a051e9c2575d0dcf3505bd0c3. Andreas Müller
10:33 AM Revision 5734eafe (cdmlib): fix #6409 remove Ignores from ValidationTest, seems to be fixed by re...
Andreas Müller
10:27 AM task #6445 (Resolved): Remove occurrence of NonViralName in external applications (TaxEditor etc.)
Andreas Müller
10:27 AM bug #6446 (Resolved): Merge botanical and zoological names into TaxonNameBase in external applica...
Andreas Müller
10:26 AM Revision 292fe199 (cdm-vaadin): ref #6446, ref #6368 remove TaxonnameBase in vaadin,
Andreas Müller
10:07 AM task #6671 (Closed): Remove generics from TaxonName
Andreas Müller
10:01 AM Revision 3c533966 (taxeditor): ref #6535 final adaptations to CdmMetaDataPropertyName in taxEditor
Andreas Müller
09:59 AM Revision 420d529a (taxeditor): ref #6690 use SchemaUpdateResult in TaxEditor
Andreas Müller
09:58 AM Revision 00d0b3a9 (taxeditor): ref #6689 adapt path to IoResultBase
Andreas Müller
09:54 AM task #6370 (Rejected): Remaining issues to merge all TaxonNameBase subclasses
We won't handle any subtasks in this container ticket Andreas Müller
09:53 AM Revision ed45cad2 (cdmlib): ref #6369 cleanup botanical name interface
Andreas Müller
09:46 AM Revision e3a4a3ff (taxeditor): ref #6446 merge taxon name subclasses in TaxEditor
Andreas Müller
09:39 AM feature request #6692 (New): Make name types changeable
Taxon names do not use subclassing anymore but have a nameType now.
So it should be possible to change the name type...
Andreas Müller
09:36 AM feature request #6691 (New): Implement all name types in NameDetailElement
It is now possible to switch name types easily. So we should allow to edit all name types, not only ICNAFP and ICZN. Andreas Müller
09:25 AM Revision 029633fe (cdmlib): minor
Andreas Müller
09:25 AM Revision 7d363a62 (cdmlib): ref #6445 add isFungus to NomenclaturalCode
Andreas Müller
09:18 AM feature request #6690 (New): Handle SchemaUpdateResult in TaxEditor
Schema updating now has an update result (#6689). The result should be shown same as for Import and Exports. Andreas Müller
09:18 AM feature request #6689 (Resolved): Implement SchemaUpdateResult instead of boolean
Andreas Müller
09:15 AM feature request #6689 (Resolved): Implement SchemaUpdateResult instead of boolean
for schema updates Andreas Müller

06/04/2017

12:01 AM Revision 6740eed5 (taxeditor): ref #6535 adapt TaxEdtior to new CdmMetaDataPropertyName
Andreas Müller
11:46 PM Revision e0a3a1c2 (taxeditor): Merge branch 'develop' into feature/cdm-4.7
Andreas Müller
11:35 PM Revision 0af19611 (taxeditor): minor
Andreas Müller
11:30 PM Revision bae5b07c (cdmlib): ref #3734 fix compilation issue
Andreas Müller
11:00 PM feature request #3734 (Resolved): Stop separating term and schema update
Applied in changeset commit:cdmlib|0c1286dddd5638f39f78147e5a6932f900ea5798. Andreas Müller
10:59 PM Revision 0c1286dd (cdmlib): fix #3734 remove all TermUpdaters
Andreas Müller
10:17 PM feature request #4580 (In Progress): Improve SchemaUpdater
Andreas Müller
10:16 PM Revision 355e6e0f (cdmlib): add commons-lang 3 to dependencies
Andreas Müller
10:15 PM Revision ba35e2f8 (cdmlib): ref #4580 Add SchemaUpdateResult for schema updating
Andreas Müller
12:22 PM Revision 2668abef (cdmlib): remove generics from SchemaUpdaterStepBase
Andreas Müller

06/03/2017

07:45 PM Revision 491cef21 (cdmlib): ref 6368 fix compilation error in TaxonServiceImplTest
Andreas Müller
07:25 PM feature request #6368 (Resolved): Merge all TaxonNameBase classes, remove DTYPE, rename table
Applied in changeset commit:cdmlib|9dc896c9a181487e9796e2ae7b0a1e2bfa9ff32a. Andreas Müller
07:22 PM Revision b8235cbb (cdmlib): minor
Andreas Müller
07:18 PM Revision ecb47516 (cdmlib): ref #6368 , ref #6671, ref #6630 adapt eflora to no taxon name model
Andreas Müller
07:18 PM Revision db183545 (cdmlib): ref #6630 and ref #6368 remove generics from TaxonName
Andreas Müller
07:18 PM Revision 2dca9610 (cdmlib): ref #6630 unified all taxon name cache strategies except for ViralNam...
Andreas Müller
07:18 PM Revision 1f088ad4 (cdmlib): ref #6368 some adaptations after rebase
Andreas Müller
07:18 PM Revision 9dc896c9 (cdmlib): fix #6368 rename table and class TaxonNameBase
Andreas Müller
07:17 PM Revision aff06aa4 (cdmlib): ref #6368 remove ZoologicalName in test DTYPE
Andreas Müller
07:17 PM Revision 4cf023af (cdmlib): ref #6368 remove BotanicalName in test DTYPE
Andreas Müller
07:17 PM Revision 3aab3f7f (cdmlib): ref #6368 remove DTYPE from TaxonNameBase in update script
Andreas Müller
07:17 PM Revision 5b47e484 (cdmlib): ref #6368 clean SetSpec
Andreas Müller
07:17 PM Revision fc4e2ef9 (cdmlib): ref #6368 remove some further occurrences of NonViralName
Andreas Müller
07:17 PM Revision 0446354d (cdmlib): ref #6368 update script for anamorphic
Andreas Müller
07:17 PM Revision e6d7b501 (cdmlib): ref #6368 remove TaxonNameBase subclasses
Andreas Müller
07:16 PM Revision cb666204 (cdmlib): Merge branch 'develop' into feature/cdm-4.7
Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/Feature.java
Andreas Müller
06:53 PM Revision 334b7b2b (cdmlib): minor
Andreas Müller
06:32 PM bug #6688 (New): Rights do not show up in rights search if no text is given
If only agent and rights type is given (typical usecase for copyright) the right does not show up in the rights searc... Andreas Müller

06/02/2017

10:08 PM Revision 3a8b638c (cdm-vaadin): ref #6673 comment on deprecated method
Andreas Kohlbecker
09:51 PM Revision 637e9cfa (cdm-vaadin): ref #6169 disabling nomReffield in name editor
Andreas Kohlbecker
09:50 PM Revision 571fd2fc (cdm-vaadin): ref #6169 fixing bug in ToOneRelatedEntityCombobox: initial selec...
Andreas Kohlbecker
09:49 PM Revision f65345c7 (cdm-vaadin): ref #6169 adding combinationAutorField to name editor
Andreas Kohlbecker
02:26 PM Revision 41153841 (taxeditor): Implement creation of characters via drag'n'drop
Patrick Plitzner
02:16 PM Revision 3f53895f (cdmlib): rename term to description in Feature again
Andreas Müller
02:11 PM Revision 00d1d291 (cdmlib): Revert "rename term to description in Feature"
This reverts commit ce781a48f8801c3f2168cae24d3a67363a556a12 except for the wanted change Andreas Müller
02:07 PM Revision ce781a48 (cdmlib): rename term to description in Feature
Andreas Müller
11:57 AM Revision 8d7c5c55 (cdm-vaadin): ref #6169 renaming taxon package to name
Andreas Kohlbecker
11:53 AM bug #6687 (Resolved): Multiple representations of the same entity merge problem
Applied in changeset commit:cdm-vaadin|754d57e3aa08265ad9b4502bf104614a5c49c574. Andreas Kohlbecker
11:40 AM bug #6687 (In Progress): Multiple representations of the same entity merge problem
The `eu.etaxonomy.vaadin.mvp.AbstractCdmEditorPresenter<DTO extends CdmBase, V extends ApplicationView<?>>` class use... Andreas Kohlbecker
11:53 AM Revision 754d57e3 (cdm-vaadin): fix #6687 hibernate.event.merge.entity_copy_observer=log to avoid...
Andreas Kohlbecker
11:21 AM Revision d5994c61 (cdm-vaadin): ref #6169 first attempt to impement prester tests - not working yet
Andreas Kohlbecker
11:20 AM Revision a2cc9f8d (cdm-vaadin): more consistent save operations with better logging
Andreas Kohlbecker
11:17 AM Revision 7349cf26 (cdm-vaadin): ref #6169 InReference and Microreference Fields for the TaxonName...
Andreas Kohlbecker

06/01/2017

05:56 PM Revision 1aa951e9 (cdm-vaadin): ref #6169 Delete button in editors optional
Andreas Kohlbecker
05:09 PM Revision fca87395 (cdm-vaadin): ref #6169 fixing problem of ToOneRelatedEntityCombobox returning ...
Andreas Kohlbecker
04:54 PM Revision 538800b4 (cdm-vaadin): ref #6169 first implementation of delete operations
Andreas Kohlbecker
03:50 PM bug #6686: Correct handling for chromatograms in dataportal
AM: ich bin gerade zufällig über http://campanula.e-taxonomy.net/cdm_dataportal/taxon/2e3aa801-7307-409c-bd39-d825f5f... Andreas Müller
03:44 PM bug #6686 (New): Correct handling for chromatograms in dataportal
Currently they are shown as WebApplication which is not correct.
They should clearly show that they are for downlo...
Andreas Müller
03:03 PM Revision 6e249736 (taxeditor): Show properties in property tree
- some refactoring and cleanup Patrick Plitzner
02:04 PM Revision 1b95cc9c (taxeditor): Merge branch 'develop' into featureTreeEditor
Patrick Plitzner
01:56 PM Revision 7916f2ec (taxeditor): Fix selection handling for DetailsView
Patrick Plitzner
01:14 PM Revision 3cbeaea7 (taxeditor): Refactor structure tree for Features
Patrick Plitzner
12:00 PM Revision 83ea2d24 (cdm-vaadin): ref #6169 add missing tiny, and small style for filtered selects ...
Andreas Kohlbecker
11:54 AM feature request #6536: extract name export of outputmodel export
seems that the rejected ticket was not the reason for not allowing the parent ticket to close. Keep it as it is. Andreas Müller
11:53 AM feature request #6536: extract name export of outputmodel export
add parent again just for testing Andreas Müller
10:20 AM feature request #6536 (Rejected): extract name export of outputmodel export
Katja Luther
10:19 AM feature request #6536 (Closed): extract name export of outputmodel export
Katja Luther
10:18 AM feature request #6536 (In Progress): extract name export of outputmodel export
Katja Luther
11:51 AM Revision 4a3ceaa1 (cdm-vaadin): removing remain from removed example UI
Andreas Kohlbecker
11:37 AM feature request #6314 (Closed): CDM light (csv) export implemented
Katja Luther
11:32 AM Revision d62daffe (taxeditor): minor
Katja Luther
11:01 AM Revision ea708ead (cdmlib): updatedObjects should not be final
Katja Luther
10:59 AM Revision 014b9fa9 (cdmlib): minor
Katja Luther
10:51 AM Revision 0c3b20de (cdmlib): adapt tests to return type updateResult and missing exception for upd...
Katja Luther
10:12 AM bug #6684 (New): Use media representation which best fits the available viewport size for the Ima...
The image overlay that opens when clicking on a thumbnail seems to be using the first representation even it this is ... Andreas Kohlbecker
09:52 AM Revision 3cb7f388 (taxeditor): Merge branch 'develop' into featureTreeEditor
Patrick Plitzner
09:33 AM Revision 63c04b36 (taxeditor): adapt changeSynonymToAcceptedTaxonOperation to changed return type...
Katja Luther
09:30 AM Revision 6826dbcd (cdmlib): change return type of changeSynonymToAcceptedTaxon to updateResult
Katja Luther
09:29 AM Revision 6b294c11 (cdm-dataportal): Improving no taxon message on name page
Andreas Kohlbecker
09:23 AM bug #6683 (Resolved): Use best quality media representation in image viewer on media page
The image viewer in the media page always chooses only the first representation even if this is a thumbnail image. Th... Andreas Kohlbecker
08:35 AM Revision bd04ac7c (taxeditor): ref #6596 Add SaveHandler for specimen editor
Patrick Plitzner
08:35 AM Revision a9e74373 (taxeditor): Delete unused classes
Patrick Plitzner
08:35 AM Revision f13a970a (taxeditor): ref #6596 Refactored selection handling to support e3 and e4 parts
Patrick Plitzner
08:23 AM Revision bef42c71 (cdm-vaadin): ref #6169 implementing lazy loading ToOneRelatedEntityCombobox fi...
Andreas Kohlbecker
08:20 AM Revision 983fb676 (cdm-vaadin): ref #6169 adding viritin vaadin addon and fixing 2 problems in th...
Andreas Kohlbecker
08:15 AM Revision 28ebdf3b (cdm-vaadin): removing eroueously added ivy settings
Andreas Kohlbecker

05/31/2017

07:42 PM Revision 83c98dbc (cdmlib): also copy appended phrase when changing synonym to taxon relation
Andreas Müller
05:20 PM Revision ae6dd647 (taxeditor): try to fix Class Cast Exception in DerivedUnitTypeDesignationElement
Andreas Müller
04:41 PM Revision 635b7e22 (cdmlib): cleanup
Andreas Müller
04:40 PM Revision 93da9908 (cdmlib): ref #6138 handle ClearDB_with_Terms_DataSet.xml correctly
Andreas Müller
03:59 PM bug #6679 (In Progress): search for misapplied names in portal does not work
Tested with cichorieae portal and it seems that the problem is the same.
The cdmlib test for testFindTaxaAndNames ...
Katja Luther
03:39 PM Revision 7fab194f (taxeditor): minor
Katja Luther
03:37 PM feature request #6527 (Resolved): Refactor delete configurator for media
Applied in changeset commit:taxeditor|55031c8b54ac487e9500d59ace74bc476a3931a1. Katja Luther
03:36 PM Revision 55031c8b (taxeditor): fix #6527: refactor media deletion configurator and the correspon...
Katja Luther
03:12 PM feature request #6682 (New): Cache strategy for misapplied names
We may want to add this to the taxon cache strategy Andreas Müller
02:28 PM feature request #6681 (New): Correct formatting for misapplied names in name editor
Misapplied names currently show authors of names in the first line and without ", non xxx".
They should show name ...
Andreas Müller
01:51 PM Revision 6c08dd61 (cdmlib): ref #6527: define default for media deletion
Katja Luther
12:55 PM Revision 4674e650 (taxeditor): minor
Katja Luther
12:13 PM feature request #6315 (Resolved): Implement setSecundumForSubtree in TaxEditor
Applied in changeset commit:taxeditor|5d69e246c91b58746dd6228f7b39977127a2353d. Katja Luther
12:10 PM Revision 5d69e246 (taxeditor): fix #6315: remaining issues of set secundum reference integration
Katja Luther
11:10 AM bug #6645: area data parameter missing in portal/description/distributionInfoFor response
Gibt es hier schon neue Informationen?
Das sind glaub ich die zugehörigen Log-Nachrichten vom cdm-Server
~~~
c...
Saskia Gennrich
10:46 AM Revision e8def0a2 (taxeditor): Fix rendering of SearchBar
Patrick Plitzner

05/30/2017

04:44 PM Revision 3ccb698b (cdm-vaadin): upgrading to vaadin 7.7.9
Andreas Kohlbecker
03:54 PM Revision 96783004 (cdm-vaadin): ref #6562 presenters can handle events from own view & solving li...
Andreas Kohlbecker
02:48 PM bug #6657: Reproducable "multiple representations" exception for polytomous keys
This exception does not appear every time, when it appears the session debugging looks like this:
~~~ text
<<< Ro...
Katja Luther
02:47 PM bug #6657 (Resolved): Reproducable "multiple representations" exception for polytomous keys
Applied in changeset commit:taxeditor|b3f33ee9b93dfe91eb576cb7686abdc1284822df. Katja Luther
02:37 PM bug #6657: Reproducable "multiple representations" exception for polytomous keys
This exception does not appear every time, when it appears the session debugging looks like this:
~~~ text
<<< Ro...
Katja Luther
02:46 PM Revision b3f33ee9 (taxeditor): fix #6657: load polytomouskey with propertypath in key editor
Katja Luther
02:11 PM Revision 965c5675 (taxeditor): Adapt to service layer change
- added propertyPath to method signature Patrick Plitzner
01:59 PM feature request #6680 (New): catch exception when user is expired

Hallo,
wenn der User aus irgendeinem Grund gesperrt ist, gibt es eine unschöne Fehlermeldung – vielleicht könn...
Patrick Plitzner
01:52 PM Revision 4f271710 (taxeditor): ref #6418: minor
Katja Luther
01:49 PM Revision fa74401f (cdmlib): Add propertyPath to service method
Patrick Plitzner
01:48 PM Revision 6e9595e7 (cdm-vaadin): Fix service handling and refresh problem for distribution table
Patrick Plitzner
01:48 PM Revision 571401ad (cdm-vaadin): removing deprecation annotations
Andreas Kohlbecker
01:46 PM Revision b418455f (cdm-vaadin): removing obsolete example code
Andreas Kohlbecker
01:45 PM Revision dde59526 (cdm-vaadin): ref #6673 removing hacks no longer needed with the PopupEditorFac...
Andreas Kohlbecker
01:45 PM bug #6418 (Resolved): Status line does not update after completing the update of the referencing ...
Applied in changeset commit:taxeditor|4c5cf2284f2702e33183963b617cfbf8ad5abc56. Katja Luther
01:43 PM Revision 4c5cf228 (taxeditor): fix #6418: set actual monitor to null and argument is final
Katja Luther
12:46 PM bug #6673 (Resolved): conceptual problems with vaadin Popup editor presenters (AbstractEditorPres...
Applied in changeset commit:cdm-vaadin|92d4dbe04f61beac39395ea88245ecbb845ee1c9. Andreas Kohlbecker
12:46 PM Revision 92d4dbe0 (cdm-vaadin): fix #6673 implementing the PopupEditorFactory and making all PopE...
Andreas Kohlbecker
12:42 PM Revision 0dfaf8fb (taxeditor): Fix typo
Patrick Plitzner
12:33 PM bug #6679 (In Progress): search for misapplied names in portal does not work
ich weiß nicht, ob wir das schon mal besprochen haben. Notfalls doppelt:
Beim Flora of Greece Portal http://portal...
Katja Luther
10:24 AM Revision 5415eac2 (cdm-dataportal): avoiding access to non existing array entry
Andreas Kohlbecker
09:30 AM Revision 837c73ee (cdm-vaadin): ref #6673 PojoEventListenerManager to manage pojos annotated with...
Andreas Kohlbecker
08:58 AM Revision 9ee0028c (cdmlib): fix #6138: add empty dataset to resources
Katja Luther

05/29/2017

03:46 PM Revision c46954e3 (cdm-vaadin): ref #6169 RelatedEntityListSelect (ToOneRelatedEntityField) edit ...
Andreas Kohlbecker
03:35 PM feature request #6678 (New): [DISCUSS] How to correctly show name relationship "orth. var." in da...
Currently we can display name relationships only as "non xxx". However, for name relationships of type "orth. var." t... Andreas Müller
03:22 PM feature request #6677 (New): Add "hort." flag to Botanical names
... indicating that the name is a horticultural name. Also adapt parser and cache strategy and TaxEditor.
Is it a...
Andreas Müller
03:04 PM bug #6138 (Closed): fix test testNoRecursiveChangeEvents() in DerivedUnitFacadeTest
this was only a problem of not refreshed dataset, so I close the ticket after commit e676c6b0. Katja Luther
03:03 PM bug #6138 (Resolved): fix test testNoRecursiveChangeEvents() in DerivedUnitFacadeTest
Applied in changeset commit:cdmlib|e676c6b0786d4bc57b88f0b87d2ad8fa0b8d1aa9. Katja Luther
03:03 PM Revision e676c6b0 (cdmlib): fix #6138: add dataset to test to fix the test
Katja Luther
02:34 PM bug #6664 (Resolved): Deleting often does not succeed without throwing an exception
Katja Luther
02:18 PM bug #6664: Deleting often does not succeed without throwing an exception
The problem is the offset of the selection when the cursor is at the beginning of the first line because the method m... Katja Luther
01:42 PM bug #6664: Deleting often does not succeed without throwing an exception
At a first view it seems to be a problem of the handling of the annotatedline editor model. sometimes the object sele... Katja Luther
02:33 PM Revision 549f7853 (taxeditor): ref #6664: fix problem of not deleted objects in bulkeditor by set...
Katja Luther
02:08 PM Revision cc5f03e7 (taxeditor): Initial commit of prototype view
Patrick Plitzner
02:02 PM feature request #6676 (New): A user with READ access to taxa but WRITE access to factual data can...
Since the name editor is disabled because of the missing rights the selection is not propagated to the factual data v... Patrick Plitzner
02:01 PM task #6675 (New): [DISCUSS] Linking related names in synonymy
We should discuss the expected behavior of name links in the synonymy, also how far they should be configurable.
E...
Andreas Müller
01:59 PM bug #6674 (New): Opening the bulk editor is possible although the user does not have the rights t...
1. Login as user without the right to open any bulk editor
1. Either in the search results or in the taxon tree open...
Patrick Plitzner
01:29 PM Revision b9eddd74 (taxeditor): Fix possile NPE
Patrick Plitzner
12:05 PM bug #6673 (Resolved): conceptual problems with vaadin Popup editor presenters (AbstractEditorPres...
In a vaadin application it must be possible to open multiple popup editors of the same type. For example to open an e... Andreas Kohlbecker
 

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