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From 02/25/2017 to 03/26/2017

03/25/2017

10:40 AM Revision 1de2da8c (cdmlib-apps): ref #6541 adapt appImport to new ImportResult structure
unknown
10:40 AM Revision b9fdd7f4 (cdmlib-apps): cleanup
unknown
02:21 AM Revision 5aece4cd (cdmlib): ref #6541 fix failing imports with check
unknown
01:46 AM Revision cd8ba318 (cdmlib): cleanup
unknown

03/24/2017

10:38 PM Revision e09b25d9 (cdmlib-apps): add an activator for outputmodel export
Katja Luther
08:41 PM Revision c3699734 (cdmlib): ref #6541 first version of ImportResult implemented
unknown
08:35 PM Revision ef934f44 (cdmlib): ref #6541 first version of ImportResult implemented
unknown
08:27 PM Revision 0befeb80 (cdmlib): Cleanup
unknown
06:17 PM Revision ad4315e4 (cdmlib): cleanup
unknown
04:38 PM Revision 0b50b058 (cdmlib): cleanup
unknown
04:33 PM feature request #6541 (New): Implement ImportResult
Andreas Müller
04:05 PM Revision c62f0e82 (cdmlib): cleanup
unknown
03:21 PM Revision 2d981b4e (cdm-vaadin): ref #6169 RegistrationWorkingSets more complete, validation probl...
Andreas Kohlbecker
10:25 AM bug #6540 (New): After changing type of reference the dialog is empty
mail von Walter:
Hallo,
im Detail-View die Referenz aufgerufen – Typ von Artikel auf Book geändert; Resultat: Lee...
Katja Luther
08:15 AM Revision b5d35767 (taxeditor): ref #6539 Set tycho version to 1.0.0
Patrick Plitzner

03/23/2017

07:45 PM Revision 414662b3 (taxeditor): ref #6539 Fix build problems
- set Bundle-RequiredExecutionEnvironment back to Java 1.8
- Remove indigo osgi dependency from target platform
Patrick Plitzner
05:52 PM Revision 4e4e473c (taxeditor): ref #6539 remove Bundle-RequiredExecutionEnvironment
Patrick Plitzner
05:51 PM bug #6539 (New): Build problems for taxeditor post 4.6 release
There were and still are several problems with the building the taxeditor. Some of them have to do with the switch to... Patrick Plitzner
04:53 PM Revision 191308d3 (cdm-vaadin): ref #6169 initial RegistrationWorkingSet implementation
Andreas Kohlbecker
04:53 PM Revision 2dfe7e2b (cdm-vaadin): ignoring ide files
Andreas Kohlbecker
04:49 PM Revision 210b9aa6 (cdm-vaadin): better WorkflowView title, validation, some EventListeners
Andreas Kohlbecker
03:20 PM Revision f1bfff2c (taxeditor): Merge branch 'develop' into workingSet
Patrick Plitzner
03:17 PM Revision 632f684a (taxeditor): Upgrade jdt.core.prefs to Java 1.8
Patrick Plitzner
03:08 PM Revision 438cfd39 (taxeditor): ref #6538 Add character select and character matrix perspective
Patrick Plitzner
03:07 PM feature request #6538 (New): Add perspectives for working character data/matrix
Add two new perspectives

1. for creating the working set and the feature tree
1. for filling out the matrix
Patrick Plitzner
03:05 PM Revision d732d4b1 (taxeditor): Remove inherited redundant class members
Patrick Plitzner
12:57 PM task #6537 (New): Import Edaphobase descriptive data
data is available in observation.observation
~~~ sql
SELECT
obs.*, descr.*
FROM
observation.observatio...
Andreas Müller
11:57 AM Revision d28454f9 (taxeditor): minor
Katja Luther
11:04 AM Revision 8e48a465 (taxeditor): Increase RequiredExecutionEnvironment to JavaSE-1.8 for test, rele...
Andreas Kohlbecker
10:53 AM feature request #6536 (New): extract name export of outputmodel export
The scientific name export of the output model export is large, so we should extract it to is own class. Katja Luther
10:47 AM Revision f3e1e1fa (taxeditor): ref #6314: adaption to changes in exports
Katja Luther
10:34 AM Revision 03ebde9e (cdmlib): ref #6314: smaller fixes, creation of tropicos full name string, crea...
Katja Luther
10:30 AM Revision 5ab2308b (taxeditor): adding EditRepository as pluginRepository to solve dependency prob...
Andreas Kohlbecker
10:20 AM Revision 24dbe552 (taxeditor): adding EditRepository as pluginRepository to solve dependency prob...
Andreas Kohlbecker

03/22/2017

12:51 AM task #6535 (New): MetaDataPropertyName from number to string in DB
MetaDataPropertyName is stored as number in CdmMetaData. We use string for TermType at other places and should do so ... Andreas Müller
12:22 AM feature request #6534 (New): Make extended details parsable
Kannst Du Dir gelegentlich mal den Eintrag für
Nepenthes flava Wistuba, Nerz & A.Fleischm., Blumea 52(1): 159 (-1...
Andreas Müller
10:25 PM bug #6533 (New): New taxon wizard does not refresh is excluded and excluded note information
When editing a taxon node and setting it to excluded and adding an excluded note + saving + afters calling "New taxon... Andreas Müller
10:04 PM feature request #6532: Make "&" in reference title parsable
Das & ist kein ganz leichter Fall, weil man eben aufpassen muss, es nicht mit dem & im Autorenteam zu verwechseln.
A...
Andreas Müller
10:03 PM feature request #6532 (New): Make "&" in reference title parsable
E.g. Nepenthes merrilliana Macfarl. in Trans. & Proc. Bot. Soc. Pennsylvania 2. 1911 Andreas Müller
09:59 PM bug #6530: After editing a nomenclatural reference of a new created name some information is lost
WBG:
ich habe einen merkwürdigen Bug gefunden, den es (glaube ich) früher nicht gab. Tritt jetzt zum 2. Mal auf, ...
Andreas Müller
09:49 AM bug #6530 (New): After editing a nomenclatural reference of a new created name some information i...
Creating a new name and edit the nomenclatural reference before the name is saved does not work.
if the nomenclatura...
Katja Luther
08:25 PM task #6512: document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
Documentation added.
> For References I only get a citation string using generateTitle() not with getTitleCache()
...
Andreas Müller
08:15 PM task #6512 (Resolved): document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
Applied in changeset commit:cdmlib|9ff954bd55f6217c9f235c6c632a9175cdea9263. Anonymous
08:15 PM Revision 9ff954bd (cdmlib): fix #6512 documentation added to generateTitle and getTitleCache
unknown
08:07 PM Revision cbc9161b (cdmlib): cleanup
unknown
07:14 PM feature request #6531 (Resolved): Add WFO Name Identifier to Identifier Types
Andreas Müller
06:56 PM feature request #6531 (In Progress): Add WFO Name Identifier to Identifier Types
Andreas Müller
06:55 PM feature request #6531 (Resolved): Add WFO Name Identifier to Identifier Types
048e0cf9-f59c-42dd-bfeb-3a5cba0191c7 from Nepenthes Andreas Müller
07:04 PM Revision 26d5d7db (cdmlib): cleanup
unknown
06:57 PM Revision 07591709 (cdmlib): ref #6531 Add WFO IdentifierType
unknown
11:02 AM Revision 45cabe7d (taxeditor): Increase RequiredExecutionEnvironment to JavaSE-1.8 for all plugins
Patrick Plitzner
10:43 AM Revision 139cabe9 (taxeditor): Increase Bundle-RequiredExecutionEnvironment to JavaSE-1.8
Patrick Plitzner
10:03 AM Revision f0925f74 (taxeditor): need to manage the itextpdf dependency in the parent pom.xml
Andreas Kohlbecker

03/21/2017

06:50 PM feature request #6529 (In Progress): Extend WorkingSet to allow a more fine grained definiton of ...
Andreas Müller
03:56 PM feature request #6529 (In Progress): Extend WorkingSet to allow a more fine grained definiton of ...
In our last meeting we decided to extend the WorkingSet class (see http://wiki.bgbm.org/additivity/index.php/Additivi... Patrick Plitzner
05:22 PM Revision c21c9bf6 (cdm-vaadin): ref #6169 removing replaced RegistrationItemDesign
Andreas Kohlbecker
05:20 PM Revision 5b4537c4 (cdm-vaadin): ref #6169 replacing declarative WorkflowViewDesign
Andreas Kohlbecker
03:25 PM Revision eaee371d (cdm-vaadin): ref #6169 renaming phycobank in packages to registration
Andreas Kohlbecker
03:16 PM Revision ce3b8933 (cdm-vaadin): ref #6169 layout improvelemts and openButton clickable
Andreas Kohlbecker
03:11 PM Revision 990b3a01 (taxeditor): Fix translation
Patrick Plitzner
03:09 PM bug #6528 (New): Exception when deleting media in media view which is also used in a MediaSpecimen
1. Open bulk editor for media
1. Create a new media
1. Save
1. Open specimen editor
1. Create a new field unit
1...
Patrick Plitzner
02:56 PM Revision c04bb9c5 (taxeditor): Increase java code level to 1.8
Patrick Plitzner
02:54 PM Revision 7bd84a66 (taxeditor): ref #6527 Refactor configurator composite
Patrick Plitzner
02:53 PM feature request #6527 (New): Refactor delete configurator for media
Hallo Katja, Patrick,

ich habe gerade aus dem Media View für Taxa versucht Bilder zu löschen.

Funktio...
Patrick Plitzner
02:50 PM Revision 1227f7ac (taxeditor): Fix typo
Patrick Plitzner
02:33 PM Revision 38053dd0 (taxeditor): ref #4611 Refactor string constants
Patrick Plitzner
02:05 PM Revision eb567e6e (taxeditor): ref #4611 l10n for DeleteConfiguration in taxeditor.store plugin
Patrick Plitzner
01:39 PM Revision 8aa8877b (taxeditor): minor adaption to java 1.8
Katja Luther
10:44 AM Revision 8f6b3c3a (cdm-vaadin): ref #6169 allowing to toggle item list and grid
Andreas Kohlbecker
09:59 AM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
Hallo Ralf,

danke für die Kontrolle.

> Bei den Strandarten, wo Min. und Max. 0 m sind, wird aber offenbar nu...
Andreas Kohlbecker
09:59 AM feature request #4639 (Closed): Show quantitative data correctly in Data portal (for Cyprus portal)
Hallo Andreas,
aus Zypern-Sicht dürfte alles umgesetzt sein. Was ich auf die Schnelle nicht überprüfen kann, sind ...
Andreas Kohlbecker
08:53 AM Revision 01a31d8a (taxeditor): managing itextpdf dependency
Andreas Kohlbecker

03/20/2017

04:20 PM bug #6526 (New): Show types in correct order
Correct order starts with Holotype –> Lectotype –> Iso(lecto)type and ends with the rest Patrick Plitzner
04:17 PM Revision 78803337 (cdmlib): fix NPE in CsvNameExport
Katja Luther
04:15 PM Revision b3babf1b (cdmlib): ref #6314: add homotypicalgroupNameComparator
Katja Luther
04:06 PM Revision 08f24060 (cdm-vaadin): ref #6169 abstract page view having header and sub-header
Andreas Kohlbecker
04:01 PM Revision f318c828 (cdmlib): ref #6314: handle homotypical group and further implementation for fi...
Katja Luther
02:24 PM feature request #6525 (In Progress): WFO Name Identifier import
Andreas Müller
02:24 PM feature request #6525 (In Progress): WFO Name Identifier import
... from a csv/Excel list of name ids/uuids and WFO Name Identifers. Andreas Müller
01:53 PM Revision 5711e069 (cdmlib): initialize export data holder when initialize exportDataWrapper
Katja Luther
01:27 PM feature request #6524 (New): Distribtion Update for Fauna Europaea
Import the adapted distributions from a file formated like the attached file Katja Luther
12:29 PM Revision 3f5a354e (taxeditor): adapt tests
Katja Luther
12:12 PM Revision 4b501287 (cdm-vaadin): ref #6169 UI preformance improvement for RegistrationItems
- using GridLayout
- disabling lazy loading
Andreas Kohlbecker
12:01 PM Revision 4c32cdde (taxeditor): adapt tests
Katja Luther
11:55 AM Revision 5212a01c (taxeditor): minor
Katja Luther
11:50 AM Revision 395d11a1 (taxeditor): minot
Katja Luther
11:40 AM Revision e6fcf4e8 (taxeditor): adapt editor to the changes in exportResult
Katja Luther
08:30 AM Revision 46a02272 (cdm-dataportal): changing block title from 'Funded by EDIT' to 'CDM - Powered...
Andreas Kohlbecker

03/19/2017

10:33 PM Revision a774af50 (cdmlib): minor
unknown
10:32 PM Revision ced26c39 (cdmlib): #6286 add Lifeform to default features
unknown
10:29 PM Revision e041d745 (cdmlib-apps): cleanup
unknown
10:28 PM Revision f40a1396 (cdmlib-apps): ref #6286 FloraHellenica import continued
unknown

03/17/2017

03:30 PM Revision 9f9727cb (cdm-vaadin): ref #6169 lazy loading of RegistrationItem in the ListView
Andreas Kohlbecker
01:47 PM Revision 6f9eb1fe (cdm-vaadin): ref #6169 using RegistrationItem in the ListView
Andreas Kohlbecker
01:46 PM Revision c5e81a37 (taxeditor): ref #4611 german i18n for taxeditor.navigator plugin
Patrick Plitzner
12:59 PM Revision c5e92bc3 (cdmlib): ref #6519: implementing wrapper for export data
Katja Luther
12:58 PM Revision d688ff5c (cdmlib): ref #6314: start implementing handleName in outputmodel export
Katja Luther
12:56 PM Revision f1badf83 (cdmlib): ref #6519:add a wrapper for the result data
Katja Luther
09:21 AM bug #6523 (New): misspellings: display order of for- and to-taxon swapped
es scheint so, dass bei misspellings (is misspelling for) NameRelationships diese falsch herum angezeigt werden. Hi... Andreas Kohlbecker
08:42 AM task #6522: package cdm-server in docker container
Yesterday I found this potentially useful article on running jvm applications in docker containers: [DZone - Java Ins... Andreas Kohlbecker
08:37 AM task #6522: package cdm-server in docker container
[Saskia Gennrich]
Ob der CDM im Docker-Container als Daemon läuft oder nicht sollte ja egal sein. Man kann den Doc...
Andreas Kohlbecker
08:35 AM task #6522: package cdm-server in docker container

jsvc macht unter Docker ziemliche Probleme, an dieser Stelle sind wir auch schon stecken geblieben als wir mal auf...
Andreas Kohlbecker
08:34 AM task #6522: package cdm-server in docker container
[Saskia Gennrich]
Wir versuchen hier am Museum Teile unserer Infrastruktur mit Docker zu realisieren.
Mit jsvc ...
Andreas Kohlbecker
08:32 AM task #6522 (New): package cdm-server in docker container
for easier distribution of the cdm-server it would be advantageous to package the cdm-server into a docker container.... Andreas Kohlbecker
01:17 AM feature request #5974 (Closed): Remove synonym relationships
This can be closed as we are using it for longer time already. Only open issue might be that imports need to be adapt... Andreas Müller
01:16 AM task #6521 (New): Check existing imports for handling new synonym structure correctly
Copied from #5974 Andreas Müller

03/16/2017

12:42 AM bug #6064 (In Progress): Eaphobase problems with webservices
Andreas Müller
12:41 AM feature request #4594: RL Webservice 7: Return taxa by Identifier
Yes it works now. Tested with http://api.cybertaxonomy.org/rl_standardliste/taxon/findByIdentifier.json?identifier=60... Andreas Müller
12:33 AM bug #6122: add titleCache service
Seems to work now. I tested with http://api.cybertaxonomy.org/cichorieae/taxon/e64a9ec7-94c8-49ee-92ba-18f2065a960a/t... Andreas Müller
12:19 AM bug #6199 (Closed): Excluded note for excluded taxon nodes in TaxEdtior
A couple of layout and workflow issues for the node wizard are now handled in #6520. So we can close this ticket. Andreas Müller
12:18 AM bug #6520 (New): Improve taxon node wizard
Current wizard has several issues:
* don't call it wizard, it is only 1 form, call it dialogue, form or what ever...
Andreas Müller
08:56 PM Revision 79de4982 (cdmlib-apps): ref #6519 adapt app-import to ExportResult
Andreas Müller
08:53 PM Revision 29419bb9 (cdmlib): ref #6314: implement deduplication for OutputModel
Andreas Müller
08:53 PM Revision c762f336 (cdmlib): ref #6314: add some parameters to OutputModel table
Andreas Müller
06:45 PM Revision b5651f76 (taxeditor): #6241 disabling doclint in javadoc-plugin
Andreas Kohlbecker
06:42 PM Revision ef0d6020 (cdm-vaadin): ref #6169 design for better list items
Andreas Kohlbecker
05:47 PM task #6258: Add Registration to cdm model
Nach abschließender Diskussion mit Henning ist klar geworden, dass der Fall mehrerer User eigentlich irrelevant ist. ... Andreas Kohlbecker
04:00 PM task #6258: Add Registration to cdm model
Aus technischer und organisatorischer Sicht ist der Submitter vor allem wichtig um die Registrierungen die zu einem U... Andreas Kohlbecker
04:00 PM task #6258: Add Registration to cdm model
Rein inhaltlich:

1. Ist es wichtig zu unterscheiden, zwischen Registrierungen von neuen Namen ...
Andreas Kohlbecker
03:59 PM task #6258: Add Registration to cdm model
Ja, das wäre ein bisschen aufwendiger. Aber sicherlich lösbar. Ein bisschen schwieriger ist der Fall bei Institutione... Andreas Kohlbecker
05:01 PM Revision 13bd503e (cdmlib): ref #6314: some more changes for the Output Model
Andreas Müller
02:20 PM Revision b41ebb00 (cdmlib): ref #6519: first implementation of exportresult
Katja Luther
02:16 PM Revision dbcb39fb (cdmlib): ref #6314: further implementation
Katja Luther
02:14 PM feature request #6519 (In Progress): Implement ExportResult
Katja Luther
02:13 PM feature request #6519 (In Progress): Implement ExportResult
currently exports return only boolean implement it with export result
merging of export results
Katja Luther
01:12 PM Revision dd189293 (cdm-vaadin): ref #6169 support for working sets in the service mock and DTO
Andreas Kohlbecker
01:06 PM Revision b33dd5d9 (taxeditor): maven-site-plugin to use umask instead of chmod
Andreas Kohlbecker
12:21 PM Revision fcab85d0 (taxeditor): adding default serverId and url for maven-wagon-plugin
Andreas Kohlbecker
08:47 AM bug #6459 (Closed): Implement deduplication for IntextReferences
no open issues without a ticket, so we can close the ticket Katja Luther

03/15/2017

10:27 PM Revision 9539d5a9 (cdmlib-apps): ref #6510 adapte rank label activator
Andreas Müller
10:19 PM Revision afcf48cb (cdmlib): fix typo and order in "Name not yet published"
Andreas Müller
08:11 PM feature request #6065 (Closed): Edaphobase DTO for getTaxonById
Andreas Müller
08:10 PM feature request #6065: Edaphobase DTO for getTaxonById
Open error handling issue moved to #6518 Andreas Müller
08:06 PM bug #6071 (Closed): Handle Taxonomische Großgruppen correctly in Edaphobase
Andreas Müller
08:00 PM feature request #6134 (Closed): Allow grouping by Taxonomische Großgruppe
Andreas Müller
07:52 PM feature request #6128 (Closed): Include authorship in taxon search web service
Moved remaining issue to open minor issues: #6518 Andreas Müller
07:34 PM task #6517 (Resolved): Stable IDs at least for example taxa
still needs to be tested Andreas Müller
06:25 PM task #6517 (Resolved): Stable IDs at least for example taxa
Open issue:

* make all IDs stable via mapping file #6518
* test
Andreas Müller
07:30 PM Revision a7424be1 (cdmlib-apps): ref #6517: make edaphobase taxon IDs stable for example data
Andreas Müller
06:59 PM task #6518 (New): Remaining minor issues for edaphobase webservices
To be able to close main tickets this is a container for remaining tasks not crucial for making the webservices work.... Andreas Müller
06:44 PM bug #6236 (Closed): Add alphabetic length ordering in name search
Andreas Müller
06:23 PM feature request #6509 (In Progress): Implement Representation csv import
Andreas Müller
11:27 AM feature request #6509 (In Progress): Implement Representation csv import
open issue
* add language into file
* make callable from Editor
Andreas Müller
06:22 PM task #6510: Import Rank labels in German and Latin
Open issues:
* some translations are still missing
* some ranks are still missing
* add to general import
Andreas Müller
11:30 AM task #6510 (New): Import Rank labels in German and Latin
Andreas Müller
05:36 PM Revision 28b766c5 (cdmlib): ref #6509 add language to representations import
Andreas Müller
05:34 PM Revision f336e43c (cdmlib): ref #6510 add first version of Latin rank labels and update German la...
Andreas Müller
05:22 PM Revision 85869da5 (cdmlib): ref #6314 Add OutputModelTables
Andreas Müller
04:51 PM feature request #6516 (New): Add instance name and instance ID to CDM meta data
Andreas Müller
04:46 PM feature request #6515 (Closed): Add Tropicos and IPNI Name Identifer
Andreas Müller
04:45 PM feature request #6515 (Resolved): Add Tropicos and IPNI Name Identifer
Applied in changeset commit:cdmlib|74b2d2bdadc79592a0c0b689499fcc7c47bd353f. Andreas Müller
04:39 PM feature request #6515 (Closed): Add Tropicos and IPNI Name Identifer
Andreas Müller
04:45 PM Revision 74b2d2bd (cdmlib): fix #6515 Add IPNI name identifier
Andreas Müller
04:43 PM Revision acaf5a1c (cdmlib-apps): ref #6515 move tropicos identifier link from mexico import to cd...
Andreas Müller
04:18 PM bug #6459: Implement deduplication for IntextReferences
Katja Luther wrote:
> there are not all cases covered by the tests, especially the usecase of deleting the intextRef...
Andreas Müller
12:18 PM bug #6459 (Feedback): Implement deduplication for IntextReferences
there are not all cases covered by the tests, espacially the usecase of deleting the intextReferenceTarget.
the rest...
Katja Luther
04:16 PM bug #6511: Handling of objects being referenced in a InTextReference during deleting
As Nepenthes has intext references we should try to implement this soon. Andreas Müller
12:21 PM bug #6511 (New): Handling of objects being referenced in a InTextReference during deleting
When deleting an object which is used as an intextReference target we have to skip deleting otherwise we get an Excep... Katja Luther
04:04 PM feature request #6514 (Duplicate): [Master] Implement IntextReferences
Andreas Müller
03:58 PM feature request #6514 (Duplicate): [Master] Implement IntextReferences
Andreas Müller
03:35 PM Revision 855da599 (cdmlib): cleanup
Andreas Müller
03:35 PM Revision 697a6de8 (cdmlib): ref #6509 first version of RepresentationCsvImport
Andreas Müller
03:35 PM Revision 17e00658 (cdmlib): ref #6509 add a SimpleImport class which is less complex to handle fo...
Andreas Müller
03:35 PM Revision fc7c4818 (cdmlib): cleanup
Andreas Müller
03:34 PM Revision 4ab4eabe (cdmlib): ref #6314: add deprecated method setSuccess
Katja Luther
03:24 PM Revision 32da6e33 (cdmlib): code cleaning
Katja Luther
03:24 PM Revision 2e90726e (cdmlib): ref #6314: implementation in progress, exportResult adaptions
Katja Luther
02:15 PM Revision 35e767bb (taxeditor): upading maven wagon extensions
Andreas Kohlbecker
02:15 PM Revision a2e7ef5c (taxeditor): using cybertaxonomy.eu instead of wp5.e-taxonomy.eu
Andreas Kohlbecker
02:07 PM Revision 1c9c8d8a (cdmlib): using cybertaxonomy.eu instead of wp5.e-taxonomy.eu
Andreas Kohlbecker
02:01 PM Revision 97d4f27f (cdmlib): ref #6314: add Tropicos Name Identifier Type
Katja Luther
01:46 PM Revision 76d9b4d1 (cdmlib): ref #6314: meta data adaption
Katja Luther
01:29 PM Revision 5465eca0 (cdm-vaadin): ref #6169 showing citation in list and eums items in UPPERCASE
Andreas Kohlbecker
01:20 PM Revision ff3eac53 (cdmlib): ref #6314: code cleaning for csv import/export
Katja Luther
01:06 PM task #6512 (Resolved): document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
The method IdentifiableEntity.generateTitle() is completely undocumented. For References I only get a citation string... Andreas Kohlbecker
12:39 PM feature request #5554 (Closed): Allow parsing of lat/long with different minute/second characters
works fine now. Katja Luther
12:36 PM feature request #5983 (Closed): Better parsing of hybrid names
looks fine, can't find a missing possible hybrid formular. Katja Luther
11:53 AM Revision 5c612f00 (taxeditor): minor
Katja Luther
11:51 AM Revision 179cb21f (cdmlib-apps): ref #6365 adapt BotanicalNames in pesi test to new structure
Andreas Müller
11:49 AM Revision a2a69c81 (cdmlib-apps): ref #6419 rename CdmApplicationDefaultConfiguration in pesi
Andreas Müller
11:39 AM Revision d5182728 (cdmlib-apps): ref #6510 add Rank translation import activator
Andreas Müller
11:38 AM Revision 606365fa (cdmlib-apps): ref #6410 Nepenthacea IPNI import activator
Andreas Müller
11:37 AM Revision 8a3f391d (cdmlib): missed to add adapted interface
Katja Luther
11:36 AM Revision 176975a5 (cdmlib-apps): minor
Andreas Müller
11:29 AM Revision 4d8fa208 (cdmlib-apps): gerge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-...
Katja Luther
11:28 AM Revision bbeda5af (cdmlib-apps): changes in pesi im and exports
Katja Luther
11:24 AM Revision 65fe78ea (taxeditor): minor for setSecundumForSubtree
Katja Luther
11:19 AM Revision 4312834c (cdmlib-apps): ref #6410 configure extension for taxon title
Andreas Müller
11:14 AM Revision 84b3a574 (cdmlib-apps): Update cdm-app poms to v4.7
Andreas Müller
10:52 AM Revision 22d2dd81 (cdmlib): use remotingProgressMonitor for setSecundumReferenceForSubtree
Katja Luther

03/14/2017

02:39 PM Revision 5069da98 (cdmlib): ref #6158 Update documentation from svn to git
Patrick Plitzner
02:28 PM bug #6507 (New): TermBase.representations still uses add not put
... we should switch to put like everywhere where we have multi-language-text. Andreas Müller
01:44 PM Revision b31886a0 (cdm-server): ref #6158 Update documentation from svn to git
- update links from trac to redmine
- update links to cybertaxonomy.eu
Patrick Plitzner
12:13 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Should submitted(By) really be of type "User", not of type Person, Team or Agent? Is it alwa...
Andreas Kohlbecker
12:12 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please add information about bidirectionality.
>
> So, should a name link to it's...
Andreas Kohlbecker
08:50 AM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> it is a bit against our CDM conventions. At other places we say collector and not collected ...
Andreas Kohlbecker
08:45 AM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please add the Enum states required for the status?
>
> Is it ok to call the enum...
Andreas Kohlbecker
08:32 AM task #6258: Add Registration to cdm model
Andreas Kohlbecker wrote:
> A Registration without a state makes not much sense. A new Registration should have the ...
Andreas Kohlbecker
08:31 AM task #6258: Add Registration to cdm model
A Registration without a state makes not much sense. A new Registration should have the state preparation`.
The stat...
Andreas Kohlbecker
11:32 AM Revision d2fbb2f5 (cdm-server): ref #6240 ref #6241 disabling doclint in javadoc for jdk.8
Andreas Kohlbecker
10:57 AM feature request #6504 (New): Bibliographic references should not start with firstname.
WGB: Wenn ich aus den Details die Liste der Referenzen aufrufe, um eine sec. Ref. einzugeben, bekomme ich eine nach V... Andreas Müller
10:43 AM Revision cc08d398 (cdmlib): remove required from TaxonNAMEBase.cultivarName JAXB definition
Andreas Müller
10:30 AM feature request #6503 (New): Make LSIDs klickable
WGB:
Für den Editing Prozess wäre es aber nützlich, wenn man den Link im Editor so clickable machen könnte, dass ...
Andreas Müller
10:06 AM Revision 8d871fb1 (cdm-vaadin): avoiding problems in Registration mock service initalization
Andreas Kohlbecker
09:37 AM bug #6241: fix java doc problems in projects
AK: Ich habe auch nachgezählt bei den '@link reference not found' Problemen handelt es sich um 151 stellen die sich a... Andreas Müller
09:36 AM Revision ada368c1 (cdmlib): remove required from TaxonBase.name JAXB definition
Andreas Müller
09:35 AM Revision 88839ba7 (cdmlib): cleanup
Andreas Müller
09:35 AM Revision f0c2dbeb (cdmlib): ref #6133 add csv file for German ranks (still incomplete)
Andreas Müller
09:34 AM Revision 575de380 (cdm-vaadin): avoiding NPE in Registration mock service
Andreas Kohlbecker
09:24 AM task #6158 (Feedback): Update EDIT documentation from svn to git
Andreas Müller wrote:
> At most places it is updated. I found some additional issues:
>
> * dataportal: link to S...
Andreas Müller
08:53 AM task #6158: Update EDIT documentation from svn to git
Andreas Müller wrote:
> Can't test yet as changes seem not to be deployed correctly yet.
The link in the descriptio...
Andreas Kohlbecker
09:12 AM Revision f8009036 (cdmlib): minor
Katja Luther
08:21 AM bug #6502 (New): LIE during request to portal/classification/{uuid}/pathFrom/{taxonNodeUUID}/toRa...

~~~
[integration_palmae] 2017-03-14 05:00:46,826 INFO [eu.etaxonomy.cdm.remote.controller.ClassificationPortalLi...
Andreas Kohlbecker

03/13/2017

11:26 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please add the Enum states required for the status?
>
> Is it ok to call the enum...
Andreas Müller
11:24 PM task #6258: Add Registration to cdm model
Can you please add information about bidirectionality.
So, should a name link to it's registrations (probably yes)...
Andreas Müller
11:01 PM task #6258: Add Registration to cdm model
Should submitted(By) really be of type "User", not of type Person, Team or Agent? Is it always necessary that a submi... Andreas Müller
10:46 PM task #6258: Add Registration to cdm model
Can you please add the Enum states required for the status?
Is it ok to call the enum class RegistrationStatus?
Andreas Müller
10:26 PM task #6258: Add Registration to cdm model
it is a bit against our CDM conventions. At other places we say collector and not collected by, or combinationAuthor ... Andreas Müller
10:28 AM task #6258: Add Registration to cdm model
ist mein Favorit, Henning Wolf-Henning Kusber
10:25 AM task #6258: Add Registration to cdm model
Also *submittedBy*?
Alle einverstanden?
Andreas Kohlbecker
10:24 AM task #6258: Add Registration to cdm model
[Henning wrote]
Hallo Andreas,

ich habe grundsätzlich immer Schwierigkeiten mit solchen Substantiven.

Erst...
Andreas Kohlbecker
10:05 PM feature request #6501 (New): Improve validation rules for name types
Copied from #6363.
To improve this functionality we could add specific messages for each attribute. Also we could ...
Andreas Müller
10:04 PM feature request #6363 (Closed): Implement validation rules for all names according to their code
I tested by setting nameApprobation to not NULL for a zoological name. I could load but not save.
To improve this ...
Andreas Müller
09:55 PM task #6158: Update EDIT documentation from svn to git
Can't test yet as changes seem not to be deployed correctly yet. Andreas Müller
09:39 PM feature request #5474: TermEditor menu should be more structured
"Others" is still not translated. Is this not possible without having the terms translated?
We may have a look tog...
Andreas Müller
09:37 PM bug #5834 (Closed): Show volume etc. for generic references
Remaining issues copied to new ticket Andreas Müller
09:36 PM bug #6500 (New): Remaining issues for volume formating in generic references
This seems to be fixed for simple reference (see test "testGenericMissingVolume"). For inreferences it is unclear wha... Andreas Müller
09:26 PM bug #6375 (Closed): footnotes on sensu references must not be prefixed with 'sensu'
The example in the above comment works fine, as well as http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/... Andreas Müller
06:16 PM bug #6111: invalid SQL (MySQLSyntaxErrorException) during call to CdmEntityDaoBase.list()
This seems to be fixed. I checked in TaxEditor that Lactuca perennis does not have any any associatedFieldUnits, so t... Andreas Müller
06:11 PM bug #6496 (Closed): Pages not shown in biblographic reference of articles
Andreas Müller
12:55 PM bug #6496 (Resolved): Pages not shown in biblographic reference of articles
Remaining issues in new ticket Andreas Müller
10:19 AM bug #6496 (In Progress): Pages not shown in biblographic reference of articles
Andreas Müller
10:19 AM bug #6496 (Closed): Pages not shown in biblographic reference of articles
Need to add to DefaultReferenceCacheStrategy Andreas Müller
06:00 PM bug #6497 (Closed): "Open in bulkeditor" does not show up in SearchResultView
Seems to work Andreas Müller
10:56 AM bug #6497 (Resolved): "Open in bulkeditor" does not show up in SearchResultView
Applied in changeset commit:taxeditor|86e788b5138d2566facf8ba2e4a92595bde6c2ad. Patrick Plitzner
10:54 AM bug #6497 (Closed): "Open in bulkeditor" does not show up in SearchResultView
Found in 4.6-SNAPSHOT Patrick Plitzner
05:15 PM Revision a6584bc2 (cdm-vaadin): ref #6169 compact string representations for registrations
Andreas Kohlbecker
05:15 PM Revision bc74cf95 (cdm-vaadin): ref #6169 generic workflows
Andreas Kohlbecker
05:15 PM Revision b0fdf0ab (cdm-vaadin): ref #6169 mock service for registrations
Andreas Kohlbecker
05:15 PM Revision bc94b935 (cdm-vaadin): ref #6169 workflowview working with Registration mock objects
Andreas Kohlbecker
04:36 PM Revision 99f6d804 (cdmlib): #6241 disabling doclint in javadoc-plugin
Andreas Kohlbecker
03:37 PM Revision cbd36af4 (taxeditor): catch NPE for DwCA Export
Katja Luther
03:18 PM Revision 4ed92181 (cdmlib): smaller changes in DwC-A Export
Katja Luther
02:13 PM Revision 5e50843e (cdm-server): Merge branch 'release/4.6.0' into develop
jenkins
02:13 PM Revision eb912f1d (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
02:12 PM Revision 4e08230f (cdm-server): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
01:56 PM Revision 139bcc01 (cdm-dataportal): updating poms for 4.8.0-SNAPSHOT development
jenkins
01:55 PM Revision ec8b7eec (cdm-server): prevent javadoc-plugin from failing under java 8
Andreas Kohlbecker
01:28 PM Revision 9bb2e856 (cdm-webapp): Merge branch 'release/4.6.0' into develop
jenkins
01:28 PM Revision 5b383c45 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
01:28 PM Revision 287aba6e (cdm-webapp): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
01:28 PM Revision 7df8e1eb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.6.0
jenkins
12:55 PM bug #6499 (In Progress): Remaining issues to include pages in bibliographic reference titleCaches
Andreas Müller
12:52 PM bug #6499 (In Progress): Remaining issues to include pages in bibliographic reference titleCaches
Open issues are:
* BookSection (see FIXME in DefaultReferenceCacheStrategyTest.testBookSectionGetTitleCache
* ins...
Andreas Müller
12:54 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
This issue once again caused a release job to be marked as failed even if it was successful: http://int.e-taxonomy.e... Andreas Kohlbecker
12:33 PM Revision 970fd7dd (cdm-vaadin): Merge branch 'release/4.6.0' into develop
jenkins
12:33 PM Revision e4691866 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
12:32 PM Revision b7463298 (taxeditor): Merge branch 'release/4.6.0' into develop
jenkins
12:32 PM Revision 2cd2eb2b (taxeditor): Merge branch 'release/4.6.0'
jenkins
12:31 PM Revision b09f6fb8 (cdm-dataportal): Merge branch 'release/4.6.0' into develop
jenkins
12:31 PM Revision 7e272bf0 (cdm-dataportal): updating poms for branch'release/4.6.0' with non-snapshot ver...
jenkins
12:31 PM Revision 8cc4272c (cdm-vaadin): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
12:31 PM Revision 24e1ad78 (cdm-dataportal): release-preparation: production level css
jenkins
12:31 PM Revision 35cad7d3 (cdm-vaadin): jenkins bumping cdmlib.version to 4.6.0
jenkins
12:30 PM Revision b686f2f1 (cdmlib): Merge branch 'master' into develop
jenkins
12:30 PM Revision 576d2a46 (cdmlib): Updating develop poms back to pre merge state
jenkins
12:30 PM Revision 69be8cb3 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
12:30 PM Revision 2eb0f303 (cdmlib): Merge branch 'release/4.6.0'
jenkins
12:16 PM Revision 61cdc6e2 (cdmlib): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
12:05 PM feature request #6483 (Closed): Restructure "Show view" and bulk editor menu
Patrick Plitzner
12:02 PM bug #6498 (New): Refactor dynamic bulk editor menu into a declarative one
Patrick Plitzner
11:57 AM Revision 77300224 (cdmlib): ref #6496 fix missing pages in bibliographic references (not yet fixe...
Andreas Müller
10:55 AM Revision 86e788b5 (taxeditor): fix #6497 Fix check for "Open in..." menu in search results
Patrick Plitzner
10:30 AM Revision c20c3c47 (cdmlib): fixing missing paging criteria in TypeDesignation DAO
Andreas Kohlbecker
10:22 AM Revision 98dc1f12 (taxeditor): show abbrev lable in nom status combo box and set default values f...
Katja Luther
10:17 AM Revision 25663daf (cdm-server): using jetty 9 runtime variable in launcher
Andreas Kohlbecker
10:17 AM Revision 353c4176 (cdm-server): eclipse launcher to start from war
Andreas Kohlbecker
10:11 AM Revision 3423ef36 (cdm-webapp): jetty9 eclipse launcher
Andreas Kohlbecker
10:03 AM Revision bcd0113d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.6.0-SN...
jenkins
10:03 AM Revision 2174a3cd (cdm-webapp): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:03 AM Revision c919182d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.7.0-SN...
jenkins
10:02 AM Revision 63667693 (taxeditor): Updated version in pom / project files to taxeditor version : 4.7....
jenkins
10:02 AM Revision 2ac6d3e2 (taxeditor): Updated version in pom / project files to taxeditor version : 4.6....
jenkins
10:01 AM Revision c05e9a7e (cdm-server): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:01 AM Revision 464ee239 (cdm-dataportal): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:01 AM Revision 21df46c8 (cdm-vaadin): jenkins bumping cdmlib.version to 4.6.0-SNAPSHOT
jenkins
10:01 AM Revision abe41ff7 (cdm-vaadin): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:01 AM Revision 8a7a3f3f (cdm-vaadin): jenkins bumping cdmlib.version to 4.7.0-SNAPSHOT
jenkins
09:59 AM Revision d510084b (cdmlib): updating poms for 4.7.0-SNAPSHOT development
jenkins

03/11/2017

11:30 PM bug #3532 (Closed): Nomenclatural reference null for database
The original issue was fixed already. Added some tests and also implemented for WebPage to use URI if titleCache is e... Andreas Müller
11:29 PM bug #3532 (Resolved): Nomenclatural reference null for database
Applied in changeset commit:cdmlib|81f9e9a509cc16776b00c8d5b7b95930402ccf90. Andreas Müller
11:29 PM Revision 81f9e9a5 (cdmlib): fix #3532 write test for "null" nom ref for databases, cdDvd and webp...
Andreas Müller
10:46 PM bug #5834: Show volume etc. for generic references
Still need to uncomment all tests of first commit. Andreas Müller
10:46 PM bug #5834: Show volume etc. for generic references
This seems to be fixed for simple reference (see test "testGenericMissingVolume"). For inreferences it is unclear wha... Andreas Müller
10:45 PM Revision 32a8e841 (cdmlib): ref #5834 tests for generic volume, still partly commented, solution ...
Andreas Müller
09:36 PM Revision f5685f13 (cdmlib): cleanup
Andreas Müller
08:55 PM bug #6111: invalid SQL (MySQLSyntaxErrorException) during call to CdmEntityDaoBase.list()
Check after release if this is fixed by d8607241 Andreas Müller
08:54 PM bug #6111 (Resolved): invalid SQL (MySQLSyntaxErrorException) during call to CdmEntityDaoBase.list()
Applied in changeset commit:cdmlib|d86072413d61d9d60a66713c0855fc6353620057. Andreas Müller
08:54 PM Revision d8607241 (cdmlib): fix #6111 hopefully fix MySQLSyntaxErrorException during call to Cdm...
Andreas Müller
08:45 PM Revision 7e7e032e (cdmlib): cleanup
Andreas Müller
08:25 PM feature request #6363 (Resolved): Implement validation rules for all names according to their code
Applied in changeset commit:cdmlib|3f88d296ddea2907b41f3ac100cf8fa4e15cc9d7. Andreas Müller
08:25 PM Revision 3f88d296 (cdmlib): fix #6363 Implement validation rules for all taxon names
Andreas Müller
06:41 PM bug #6466: IndexOutOfBoundsException when entering month
There was still an open issue when the day was first set and then month for a combination that does not exist (e.g. 2... Andreas Müller
06:36 PM bug #6454 (Feedback): NumberWithLabelElement.getFloat and .getInteger should return null
Andreas Müller
06:32 PM bug #6454 (Resolved): NumberWithLabelElement.getFloat and .getInteger should return null
Applied in changeset commit:taxeditor|df566dafc6d25450bec8cabdd34ddb2fed099130. Andreas Müller
06:32 PM Revision c2c33ccd (taxeditor): Cleanup
Andreas Müller
06:32 PM Revision df566daf (taxeditor): fix #6454 Allow null for numbers
Andreas Müller
03:21 AM Revision 486205ef (taxeditor): cleanup
Andreas Müller
01:54 AM bug #6477 (Closed): Show collection name in specimen editor if no collection code exists
Works well Andreas Müller
01:45 AM Revision 680b19b1 (cdmlib): ref #5620 reduce log level for Reference null titleCaches
Andreas Müller
01:44 AM Revision 085e203e (cdmlib): cleanup
Andreas Müller
01:38 AM bug #6495 (New): Fix null titleCache for CoL E+M import
In current E+M import we do have 591 references with protected null titleCache. Need to check and fix why this is so. Andreas Müller
01:33 AM bug #6494 (New): Fix null titleCache for CoL import
After last CoL import there were 4 references with a titleCache = null. 3 of them were unreferenced (maybe added late... Andreas Müller

03/10/2017

12:04 AM Revision bb750b55 (cdmlib): ref #5117 add slash to UML link
Andreas Müller
09:22 PM bug #6493: Another reproducable "multiple representations" exception for name relationships
There was a similar reproducable issue in bulk editor in v4.5.1 but I could not reproduce this in 4.6-SNAPSHOT anymor... Andreas Müller
09:13 PM bug #6493: Another reproducable "multiple representations" exception for name relationships
~~~
login : admin
editor version : 4.6.0.201703101454
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
schem...
Andreas Müller
09:09 PM bug #6493 (New): Another reproducable "multiple representations" exception for name relationships
How to reproduce
* Open new taxon in name editor with accepted name "Correctly spelled Taxon" and synonym "Uncolle...
Andreas Müller
08:34 PM Revision bd1bf93c (cdmlib): ref #6459 added IntextReferenceHelper class and added some more tests...
Andreas Müller
04:08 PM bug #6466 (Closed): IndexOutOfBoundsException when entering month
Works fine now Andreas Müller
02:02 PM bug #6466 (Resolved): IndexOutOfBoundsException when entering month
Andreas Müller
03:22 PM Revision b769449a (taxeditor): ref #5923 Add "Open in Specimen Editor" for bulk specimen editor
Patrick Plitzner
03:19 PM task #6258: Add Registration to cdm model
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> Maybe submitter is better than originator.
Yes I agree, ...
Andreas Müller
03:12 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please define semantics of the new attribute a bit more. Is the person the one who...
Andreas Kohlbecker
01:16 PM task #6258: Add Registration to cdm model
Andreas Kohlbecker wrote:
> Andreas Kohlbecker wrote:
> > We need to be able to associate Registrations with Users ...
Andreas Müller
12:56 PM task #6258: Add Registration to cdm model
Andreas Kohlbecker wrote:
> We need to be able to associate Registrations with Users and CRUD of Registrations need ...
Andreas Kohlbecker
03:08 PM feature request #6483: Restructure "Show view" and bulk editor menu
Ok. Can you close this ticket and open the new one for refactoring? Andreas Müller
02:05 PM feature request #6483: Restructure "Show view" and bulk editor menu
Moving media down unfortunately is not that easy because the bulk editor menu is dynamic making it hard to reference ... Patrick Plitzner
02:50 PM bug #6477 (Resolved): Show collection name in specimen editor if no collection code exists
Applied in changeset commit:taxeditor|4f7cce8a1627211369500eca0d9f30e5a52e5293. Patrick Plitzner
02:50 PM Revision 4f7cce8a (taxeditor): fix #6477 Show collection nameif no collection code exists
Patrick Plitzner
02:43 PM bug #6492 (New): Right click on concept relationship does not show "Open In" menu if no record is...
Example: I have a Taxon with to taxon relationships. When I click on the taxon the concept relationship view shows th... Andreas Müller
01:31 PM Revision 7158c91c (taxeditor): ref #6466 Fixed special case for day number of february
Patrick Plitzner
01:13 PM task #6474 (Duplicate): Move Specimen-Editor to bulk editor menu
Patrick Plitzner
01:11 PM task #4232 (Closed): Check all Comparators for fulfilling the Comparator contract
Yes then we can close the ticket.
Katja Luther
12:58 PM task #4232 (Resolved): Check all Comparators for fulfilling the Comparator contract
Probably we can close this ticket now? Andreas Müller
12:57 PM task #4232: Check all Comparators for fulfilling the Comparator contract
Andreas Müller wrote:
> KL: Bei DistributionNodeByAreaLabelComparator
>
> Würde hier auch nochmal einen weiteren ...
Andreas Müller
12:22 PM task #4232: Check all Comparators for fulfilling the Comparator contract
KL: Bei DistributionNodeByAreaLabelComparator
Würde hier auch nochmal einen weiteren Vergleich einfügen, wenn die ...
Andreas Müller
12:21 PM task #4232: Check all Comparators for fulfilling the Comparator contract
Andreas Müller wrote:
> KL: AreaNodeComparator in FloraCubaCondensedDistributionComposer
>
> Hier werden die name...
Andreas Müller
12:20 PM task #4232: Check all Comparators for fulfilling the Comparator contract
KL: AreaNodeComparator in FloraCubaCondensedDistributionComposer
Hier werden die namedAreas verglichen, indem die ...
Andreas Müller
01:02 PM bug #6488 (Resolved): Always show some label text in the specimen editor even when no information...
Applied in changeset commit:taxeditor|f555d4cc02832475f2960d04bd605c08afa77078. Patrick Plitzner
10:12 AM bug #6488 (Resolved): Always show some label text in the specimen editor even when no information...
Fallback could be UUID or ID or both Patrick Plitzner
01:01 PM Revision 4e195c54 (cdmlib): ref #6488 Add media title cache as FormatKey
Patrick Plitzner
01:01 PM Revision 9c61a32b (cdmlib): ref #6488 Extract String constant
Patrick Plitzner
01:01 PM Revision f555d4cc (taxeditor): fix #6488 Always have any text fallback for derivative labels
Patrick Plitzner
12:54 PM Revision 375d001e (cdmlib): ref #4232 implement comparator contract for DistributionNodeByAreaLab...
Andreas Müller
12:49 PM Revision 89cff4b7 (cdm-vaadin): ref #6169 renaming button
Andreas Kohlbecker
12:17 PM Revision 39d13a15 (cdmlib): ref #4232 Improve OrderedTermBase.performCompareTo to include vocabu...
Andreas Müller
11:28 AM task #6271 (Duplicate): Move user and user groups from bulk editor menu to Admin menu
Andreas Müller
11:18 AM feature request #6491 (New): Show count for referencing objects
It would be nice to have a count on the results of the referencing objects view. E.g. in the status line. Andreas Müller
10:58 AM bug #6459: Implement deduplication for IntextReferences
Could you please review Andreas Müller
10:55 AM bug #6450: New reference with only the protected titleCache set is not found in reference select ...
Maybe the concrete problem was partly fixed by #6449, but should still exist if not only the titleCache is set (as pr... Andreas Müller
10:55 AM Revision 3a5a8583 (taxeditor): avoid empty lables in referencing objects view
Katja Luther
10:52 AM bug #6449: Nomenclatural references with protected titleCache are not shown correctly in name editor
Fixed, that an unprotected titleCache is empty if ONLY the other cache is not empty and is protected. This does not w... Andreas Müller
10:43 AM bug #6449 (Resolved): Nomenclatural references with protected titleCache are not shown correctly ...
Applied in changeset commit:cdmlib|f0559e00a87ec517b860678d7209f72c20b45679. Andreas Müller
10:46 AM bug #6490 (New): Check code for using only single setTitleCache in Reference
This is copied from #6449. See description there.
Check cdmlib and taxeditor (can't set both categories here)
Andreas Müller
10:43 AM Revision f0559e00 (cdmlib): fix #6449 Add convenience method to set both caches as protected
Andreas Müller
10:34 AM Revision 30d532b8 (cdmlib): ref #6449 Avoid empty titleCaches if only one cache is protected
Andreas Müller
10:30 AM bug #6489 (New): Selection dialogs should not show the already selected element
In selection dialogs the element which is already selected should not be presented in dialog. e.g. if an accepted tax... Katja Luther
10:24 AM bug #6424 (Feedback): Empty name creates problem/NPE in name editor
Generally it works now and ticket can be closed. Andreas Müller
10:24 AM bug #6424: Empty name creates problem/NPE in name editor
Could you still adapt the message that is shown if one tries to save a taxon with empty names "Es wurde versucht ein ... Andreas Müller
09:27 AM bug #6424 (Resolved): Empty name creates problem/NPE in name editor
Katja Luther
09:27 AM bug #6424 (Feedback): Empty name creates problem/NPE in name editor
sorry, now it works also with delete all empty names. Katja Luther
09:24 AM bug #6424 (Resolved): Empty name creates problem/NPE in name editor
Applied in changeset commit:taxeditor|898894c82879b1b37fe04b055cdc70bce67bb183. Katja Luther
01:08 AM bug #6424 (Feedback): Empty name creates problem/NPE in name editor
Sorry, I have to reopen.
When I tried to delete the name with "Delete all empty names" I still got an NPE, while d...
Andreas Müller
01:02 AM bug #6424 (Closed): Empty name creates problem/NPE in name editor
Seems to work correctly now. Andreas Müller
09:52 AM bug #5691 (Closed): Referencing objects view makes editor inresponsive if an object references ma...
Yes we close this ticket now, the View really works MUCH better now.
Anyway, could you still adapt the label provide...
Andreas Müller
09:18 AM bug #5691 (Resolved): Referencing objects view makes editor inresponsive if an object references ...
with the last commits it should work now Katja Luther
09:28 AM bug #6440 (Closed): Improve IPNI Name Service
looks fine.
Katja Luther
09:24 AM Revision 898894c8 (taxeditor): fix #6424: fix NPE when choosing delete all empty names
Katja Luther
02:12 AM task #1606 (Closed): Restrict filtered selection of in references to the respective reference types
Seems to work now Andreas Müller
02:02 AM bug #6262 (Feedback): Implement Rights reusable in TaxEditor
Seems to work (at least when removing unique key from MN tables).
Open issues:
* warning about multiple uses (...
Andreas Müller
01:59 AM feature request #6487 (New): Implement warning for multiple used records where ever needed
We have implemented warnings for references and maybe some others if they are used multiple times (and therefore edit... Andreas Müller
01:32 AM feature request #6315 (Feedback): Implement setSecundumForSubtree in TaxEditor
Some Remaining issues:

* The functionality is still missing for whole classifications
* Dialog window has no tit...
Andreas Müller
01:12 AM bug #6322 (Closed): In the specimen editor showing the warning for long loading times already has...
Seems to be much faster now Andreas Müller

03/09/2017

12:56 AM bug #6466 (Feedback): IndexOutOfBoundsException when entering month
Works for the given problem. But I still got an issue when entering month=2 and day = 31 (year = 1886)
~~~
login ...
Andreas Müller
12:51 AM bug #6479 (Closed): Class Cast Exception when trying to delete a misapplication
OK, so I guess it is fixed and can be closed. Andreas Müller
08:40 PM Revision 34b111d7 (cdmlib): fix failing tests
Andreas Müller
08:32 PM Revision eabf5f04 (cdmlib): fix failing tests
Andreas Müller
07:45 PM Revision c2a7b4f2 (cdm-vaadin): removing debug code
Andreas Kohlbecker
07:41 PM Revision fc216715 (cdm-vaadin): logging with log4j
Andreas Kohlbecker
06:34 PM Revision af8569f7 (cdm-vaadin): ref #6169 list view layout improvements and coloring statuses
Andreas Kohlbecker
06:34 PM Revision ccba3ab6 (cdm-vaadin): using jetty 9 runtime variable in launcher
Andreas Kohlbecker
06:33 PM Revision ec462234 (cdm-vaadin): ref #6169 initial list view on registrations
Andreas Kohlbecker
06:30 PM Revision 9fcf0574 (taxeditor): ref #5923 "Open in.." menu restructuring for conecpt view
- added "Open in" option for bulk editor and name editor coming from
each of those
Patrick Plitzner
05:02 PM feature request #6486 (New): Implement handling of IntextReferences in dataportal
For information about IntextReferences see #4719.
References generally should link to the according object of type...
Andreas Müller
04:57 PM feature request #6485 (New): Implement IntextReferences in TaxEditor
For information about IntextReferences see #4719
One solution could be the nebula rich text editor: http://www.ecl...
Andreas Müller
04:42 PM Revision c524a825 (cdmlib): fix #6459 Implement deduplication for IntextReferences (add interface...
Andreas Müller
04:20 PM bug #6459 (Resolved): Implement deduplication for IntextReferences
Applied in changeset commit:cdmlib|3c6ba3cd2ac13cda7295367970a478290bbf52bf. Andreas Müller
04:20 PM Revision 3c6ba3cd (cdmlib): fix #6459 Implement deduplication for IntextReferences
Andreas Müller
04:20 PM Revision 3c6c0d2c (cdmlib): cleanup
Andreas Müller
04:09 PM Revision 2023e9a6 (cdmlib): ref #6484 Fix test for specimen count retrieval
- temporary fix until ticket is solved Patrick Plitzner
04:01 PM bug #6484 (New): Include all paramaters of FindOccurrencesConfigurator in HQL query
Currently `AssignmentStatus` and `isRetrieveIndirectlyAssociatedSpecimens()` are not queried via HQL but in the servi... Patrick Plitzner
03:53 PM Revision 64f636f0 (taxeditor): fix problem when description of an element is null in referencing ...
Katja Luther
03:41 PM feature request #6483: Restructure "Show view" and bulk editor menu
Also we could move "Media" down in the menu as it is less important than specimen. Andreas Müller
03:39 PM feature request #6483 (Feedback): Restructure "Show view" and bulk editor menu
Looks good.
Can we still add separators in Admin menu to separate the user management menu items from others?
Als...
Andreas Müller
02:09 PM feature request #6483 (Resolved): Restructure "Show view" and bulk editor menu
Applied in changeset commit:taxeditor|5e008e493bbb4aeb2da462b3e5978dff82280f1e. Patrick Plitzner
02:09 PM feature request #6483 (Closed): Restructure "Show view" and bulk editor menu
Patrick Plitzner
03:40 PM Revision 9a512b18 (taxeditor): ref #5923 "Open in.." menu restructuring
- "BulkEditor" option is removed when already in BulkEditor
- "BulkEditor" added for Specimen Editor
Patrick Plitzner
03:07 PM bug #6408 (Closed): NPE in AbcdParseUtility
Katja Luther
03:05 PM bug #6424: Empty name creates problem/NPE in name editor
please review Katja Luther
03:03 PM bug #6424 (Resolved): Empty name creates problem/NPE in name editor
Applied in changeset commit:taxeditor|b8da2ad780bc334e229c35bdaefb3e687fc99889. Katja Luther
03:04 PM feature request #6315: Implement setSecundumForSubtree in TaxEditor
please review Katja Luther
03:03 PM Revision b8da2ad7 (taxeditor): fix #6424: check if name is already persisted before trying to delete
Katja Luther
02:51 PM bug #6322 (Resolved): In the specimen editor showing the warning for long loading times already h...
Applied in changeset commit:cdmlib|1c1517f9e08f7ec4d0ee6a75cf3e965f35ee185a. Patrick Plitzner
11:32 AM bug #6322: In the specimen editor showing the warning for long loading times already has a long l...
It takes such a long time because for counting the same method is used as for retrieval Patrick Plitzner
02:51 PM Revision 1c1517f9 (cdmlib): fix #6322 Speed up result count for specimen search
Patrick Plitzner
02:20 PM Revision 794e59a4 (taxeditor): improve description for taxonnodes as referenced object
Katja Luther
02:09 PM Revision 5e008e49 (taxeditor): fix #6483 Restructure view and bulk editor menu
- move specimen editor (hierarchy) to bulk editor menu
- move user and group menu item to admin menu
Patrick Plitzner
12:26 PM Revision ee06f297 (cdmlib): using jetty 9 runtime variable in launcher
Andreas Kohlbecker
12:26 PM Revision 6c73c484 (cdmlib): avoiding LIE in name catalogue controller
Andreas Kohlbecker
12:16 PM Revision 22b92234 (taxeditor): minor
Katja Luther
12:16 PM Revision cd19940f (taxeditor): fix details view for authorship cache and referencing objects view
Katja Luther

03/08/2017

05:25 PM bug #6322: In the specimen editor showing the warning for long loading times already has a long l...
This also happens in production. Searching takes at least >15sec Patrick Plitzner
05:20 PM bug #6199 (Resolved): Excluded note for excluded taxon nodes in TaxEdtior
Andreas Müller
05:11 PM bug #6381 (Closed): Specimen titleCache should include barcode or catalogue number if accession n...
works fine Patrick Plitzner
05:07 PM bug #6433 (Closed): NPE in PartialElement
works fine Patrick Plitzner
05:05 PM bug #6453 (Closed): Deleting text from min/max fields throws NPE
works fine Patrick Plitzner
05:03 PM bug #6466 (Resolved): IndexOutOfBoundsException when entering month
Applied in changeset commit:taxeditor|361f2123e6fd31a0747124531bd87c367a10ea26. Patrick Plitzner
05:03 PM Revision 361f2123 (taxeditor): fix #6466 Fix possible IndexOutOfBoundException
Patrick Plitzner
04:53 PM feature request #5474: TermEditor menu should be more structured
How should the i18n for the terms work? Are there any translation csv files? The code already calls the correct metho... Patrick Plitzner
04:12 PM Revision c88cdfbe (taxeditor): Extract string constants
Patrick Plitzner
03:10 PM Revision 939829bc (taxeditor): ref #4611 i18n for taxeditor.navigator plugin
Patrick Plitzner
02:21 PM task #6258: Add Registration to cdm model
Andreas Kohlbecker wrote:
> A registration in progress can be dependant on another registration which needs to be co...
Andreas Müller
01:32 PM bug #6432 (Closed): Apply CSS only to non-admin pages
Andreas Kohlbecker
01:27 PM Revision 63f6d312 (cdm-dataportal): ref #6432 more fine tuned inclusion of css.
CSS rules for admin/config/cdm_dataportal/settings are included
on all settings rule.
CSS rules for the debug block a...
Saskia Gennrich
01:27 PM Revision 3d4be61c (taxeditor): add logging for exceptions in referencing objects view
Katja Luther

03/07/2017

06:47 PM Revision 39f90195 (cdm-vaadin): improved list view on registrations
Andreas Kohlbecker
06:05 PM task #6258: Add Registration to cdm model
We need to be able to associate Registrations with Users and CRUD of Registrations need to be controlled via GrantedA... Andreas Kohlbecker
02:45 PM task #6258: Add Registration to cdm model
A registration in progress can be dependant on another registration which needs to be completed before it is possible... Andreas Kohlbecker
04:22 PM bug #6432: Apply CSS only to non-admin pages
Ja, aber das Problem ist ja nicht direkt mit dem Theme, sondern wo benötigt das cdm_dataportal welche CSS regeln.
Zu...
Saskia Gennrich
03:59 PM bug #6432: Apply CSS only to non-admin pages
Hast du das auch mit dem 'garland_cichorieae'-Theme getestet? Andreas Kohlbecker
03:30 PM bug #6432 (Resolved): Apply CSS only to non-admin pages
Ich konnte das leider nicht reproduzieren.
Habe das CSS ein bisschen refactored. CSS für die Settings Tabelle wird a...
Saskia Gennrich
03:28 PM Revision f8485a00 (taxeditor): ref #5691: avoid invalid thread access in referencing object view ...
Katja Luther
03:25 PM Revision f7e45a96 (cdm-dataportal): ref #6431 adding missing class attribute for pseudoFeatures
Andreas Kohlbecker
03:25 PM Revision c62c32d5 (cdm-dataportal): improving documentation
Andreas Kohlbecker
03:25 PM Revision 69174a0f (cdm-dataportal): ref #6432 more fine tuned inclusion of css.
CSS rules for admin/config/cdm_dataportal/settings are included
on all settings rule.
CSS rules for the debug block a...
Saskia Gennrich
03:25 PM Revision 370f64c7 (cdm-dataportal): fix #6431 fixing extlinks for genus pages
Andreas Kohlbecker
03:25 PM Revision 33e736bb (cdm-dataportal): fixing 2 bugs in media caption creation
Andreas Kohlbecker
03:25 PM Revision 3fa9d0bd (cdm-dataportal): palmweb: disabling custom media caption theme function
Andreas Kohlbecker
03:25 PM Revision 36401692 (cdm-dataportal): adapting new lines in test to modified interpretation in brow...
Andreas Kohlbecker
03:25 PM Revision 3b66f831 (cdm-dataportal): ref #6375 adapting test case
Andreas Kohlbecker
03:25 PM Revision 067f2cef (cdm-dataportal): adapting new lines in test to modified interpretation in brow...
Andreas Kohlbecker
03:25 PM Revision e4272e1b (cdm-dataportal): fix #6442 p tags as additional option to enclose description ...
Andreas Kohlbecker
03:25 PM Revision 6ddc6fc6 (cdm-dataportal): fix #6375 removing 'sensu' from footnote text
Andreas Kohlbecker
03:02 PM bug #5691 (Feedback): Referencing objects view makes editor inresponsive if an object references ...
Andreas Müller
03:02 PM bug #5691: Referencing objects view makes editor inresponsive if an object references many objects
Unfortunately it still exists. I opened my test database rem_conf_am on edit_test and opened taxon Abies testus notho... Andreas Müller
01:38 PM bug #5691 (Resolved): Referencing objects view makes editor inresponsive if an object references ...
please check whether the exception occurs again. Katja Luther
02:56 PM task #1606 (Resolved): Restrict filtered selection of in references to the respective reference t...
please review Katja Luther
02:55 PM Revision fd482224 (cdmlib): ref #1606: fix exception for pattern ? in reference selection dialog
Katja Luther
02:26 PM Revision fd29bcac (taxeditor): ref #6315: add message that if no reference is chosen the sec refe...
Katja Luther
02:11 PM Revision 63f3c747 (taxeditor): ref #6315: avoid NPE if new entity is created from filteredSelecti...
Katja Luther
01:37 PM bug #6479 (Resolved): Class Cast Exception when trying to delete a misapplication
This was fixed, see the associated revision.
Katja Luther
10:59 AM Revision 484f8526 (taxeditor): ref #5691 Only have on update job at a time for ReferencingObjects...
Patrick Plitzner
10:14 AM feature request #6482 (New): Simplify adding of repeating data like sources
WGB: beim Eingeben multipler Facts aus einer Quelle nervt das wiederholte Aufrufen der Referenz auf die Dauer (und vi... Andreas Müller

03/06/2017

06:07 PM Revision 12b37588 (cdm-vaadin): initial list view on registrations
Andreas Kohlbecker
04:31 PM Revision cd80312e (taxeditor): ref #4611 Fix Messages.java bundle path
Patrick Plitzner

03/03/2017

02:59 PM Revision c33e979b (cdm-vaadin): ref #6169 preparing for opening name editor
Andreas Kohlbecker
02:10 PM Revision 144952dc (cdmlib): cleanup
Andreas Müller
01:56 PM Revision 0b44c814 (cdm-vaadin): ref #6169 using mvp for the RegistrationWorkflowView
Andreas Kohlbecker
12:04 PM Revision 7b6f4230 (cdm-vaadin): adding spring-mvp framework
Andreas Kohlbecker
11:54 AM Revision 67aa5f47 (cdm-vaadin): removing unused class ValoMenuLayout
Andreas Kohlbecker
11:53 AM task #6481: Sort out synonym relationships with 2 invalid taxa
Fälle für die die Lösung nicht gilt:
~~~ sql
SELECT sr.synonym_role, s.parent_taxon_fk synParent, t.parent_taxon_...
Andreas Müller
11:27 AM bug #6447 (Rejected): advanced search doesn't return results
Damit kann das ticket also als 'rejeceted' geschlossen werden da es sich ja nicht wirklich um einen Bug gehandelt hat. Andreas Kohlbecker
11:22 AM bug #6447 (Resolved): advanced search doesn't return results
Damit die "Advanced Search" funktioniert muss vorher der Freetext index gebaut werden unter /admin/config/cdm_datapor... Saskia Gennrich
11:17 AM Revision 1ca00ef0 (cdm-vaadin): ref #6169 more complete workflow view
Andreas Kohlbecker
09:09 AM Revision 59eb4451 (cdm-vaadin): ref #6169 initial concept fo a workflow view
Andreas Kohlbecker

03/02/2017

11:21 PM task #6481 (New): Sort out synonym relationships with 2 invalid taxa
Synonymbeziehungen (congruent) mit 2 invaliden Taxa:
**LÖSUNG:** Diese Taxa scheinen alle in 2 Beziehungen zu sein...
Andreas Müller
04:43 PM bug #6480 (New): Re-saved by cascade in specimen bulk editor
When trying to delete a specimen that belongs to a field unit and that does have a sibling specimen I get the followi... Andreas Müller
04:36 PM bug #6479: Class Cast Exception when trying to delete a misapplication
This happened regularly in v4.5.1 but I could not reproduce in 4.6-SNAPSHOT. Was it fixed in the meanwhile or is it d... Andreas Müller
04:28 PM bug #6479 (Closed): Class Cast Exception when trying to delete a misapplication

~~~
login : admin
editor version : 4.5.1
server : api.cybertaxonomy.org (cybertaxonomy.org) / caryo_nepenthaceae...
Andreas Müller
04:26 PM bug #6478 (New): We need a count for bulk editors
In the specimen tree editor we already do have a count in the status line which is very helpful.
Which should have t...
Andreas Müller
04:24 PM bug #6477 (Closed): Show collection name in specimen editor if no collection code exists
Currently it only shows [-] if no collection code exists. But there are some collections that do not have a code. Andreas Müller
04:22 PM bug #6476 (New): Remove MediaRepresentation and MediaRepresentationPart from Referencing objects ...
Compare with annotations, etc...
First check if this needs to be done in cdmlib or in TaxEditor.
Btw. we need t...
Andreas Müller
04:18 PM feature request #6475 (New): Make specimen tree editor collapsable and expandable
It would be nice to have the specimen tree editor collapsable and expandable
That makes it easier to search certai...
Andreas Müller
04:15 PM task #6474 (Duplicate): Move Specimen-Editor to bulk editor menu
Currently the Specimen-Editor opens via Windows-Show Views.
This is incorrect as the Specimen-Editor is not a view...
Andreas Müller
04:09 PM bug #6473 (New): Marker by default should be true
If one creates a new marker the default value is false.
In most cases, when you add a marker you may want to set i...
Andreas Müller
03:57 PM feature request #6472 (New): Include keys as target for IntextReferences
Examples that need to be updated when this is implemented:
* http://caryophyllales.org/nepenthaceae/cdm_dataportal...
Andreas Müller
03:39 PM feature request #6471 (New): Show description text for individuals association
Individuals association has a multi-language text attribute "description". This should be shown in the specimen area ... Andreas Müller
03:26 PM bug #6470 (New): Show annotations on specimen
This is true for both view, the compressed table view and the default view.
An example you find at http://caryophy...
Andreas Müller
03:08 PM Revision 3f1ceae0 (cdm-vaadin): ref #6169 more views for starting registrations and basic branding
Andreas Kohlbecker
12:40 PM bug #6469 (New): Types longer than 1 line should have an identation
Otherwise it is difficult to read, especially when multiple types exist Andreas Müller
12:38 PM bug #6468 (New): sec and sensu not correct if misapplied name relationship reference exists
Currently, if a misapplied name taxon has a secundum reference and a misapplied name relationship reference something... Andreas Müller
12:31 PM feature request #6467 (New): [DISCUSS] Abbreviated first name for person
To better format persons in references, names, ... we maybe need an additional field abbreviated first name.
Otherwi...
Andreas Müller
12:13 PM bug #6466 (Closed): IndexOutOfBoundsException when entering month
When entering the month for a field unit using "22" I got an IndexOutOfBounds (IOOB) exception.
Instead we expect ...
Andreas Müller
12:08 PM feature request #6465 (New): History for search
A history droptdown, that shows the 10(?) latest searches and makes them selectable would be a nice additional featur... Andreas Müller
12:05 PM bug #6464 (New): UUID can not be null exception when trying to delete a SingleRead
When trying to delete a single read from a specimen in cichorieae test db (test server) I got
~~~
login : admin
...
Andreas Müller
11:55 AM bug #5691: Referencing objects view makes editor inresponsive if an object references many objects
Invalid thread access still exists. Happened when editing specimen data in specimen editor.
~~~
login :
editor ...
Andreas Müller
11:46 AM bug #6431 (Closed): php INFO 'warnings' in fauna europeae taxon page
Andreas Kohlbecker
11:43 AM bug #6431 (Resolved): php INFO 'warnings' in fauna europeae taxon page
Applied in changeset commit:cdm-dataportal|e5f17100c16258bff550d964795bc5c12168f9a2. Andreas Kohlbecker
11:45 AM bug #6463 (New): Removing a type designation from the name or specimen does not delete the type d...
The type designation record itself stays in the database.
This needs some discussion:
* if removing a type desi...
Andreas Müller
11:43 AM Revision e5f17100 (cdm-dataportal): fix #6431 fixing extlinks for genus pages
Andreas Kohlbecker
11:39 AM Revision 9e7ae433 (cdm-dataportal): ref #6431 adding missing class attribute for pseudoFeatures
Andreas Kohlbecker
11:34 AM bug #6462 (New): Changing specimen in type designation should not set dirty flag
Currently, if one opens a specimen via type designation details view and changes it, the dirty flag is set in the nam... Andreas Müller
11:26 AM bug #6461 (New): Palmweb use records do not correctly implement the feature block setting rules
The rule for the name in source is:
---
**Link to name used in source:**
Whether to show name is source info...
Andreas Kohlbecker
11:25 AM feature request #6460 (New): Refactor referencing objects in a way that supplemental data know wh...
Currently the referencing objects view does not give much information about e.g. original sources. As the source does... Andreas Müller
11:15 AM bug #6459 (In Progress): Implement deduplication for IntextReferences
Andreas Müller
11:15 AM bug #6459 (Closed): Implement deduplication for IntextReferences
Currently if references are merged the markup text referenced by an IntextReference using this reference is not chang... Andreas Müller
11:13 AM feature request #6458 (New): Syn. nov. for synonyms
Syn. nov. is a synonym information that refers to the secundum reference of the synonym.
Therefore we need either ...
Andreas Müller
11:09 AM feature request #6457 (New): Views should be available via right mouse click
Often one wants to have a look to certain aspect of a record displayed in some editor that requires opening an extra ... Andreas Müller
11:06 AM Revision a2196313 (cdm-dataportal): improving documentation
Andreas Kohlbecker
11:01 AM feature request #6456 (New): Make Misapplied names visible in concept relation view via configura...
Currently misapplied name relationships are not shown at all in the concept relationship view.
It should be configur...
Andreas Müller
10:53 AM bug #6455 (New): Remove not possible for country in field/derived unit details view
Once a country is selected it can not be removed anymore, only replaced. This is due to a missing remove button. Andreas Müller
10:17 AM Revision e9aae730 (cdm-dataportal): ref #6375 adapting test case
Andreas Kohlbecker
10:11 AM bug #6432 (Feedback): Apply CSS only to non-admin pages
Hi Saskia,
your commit causes a problem in the admin settings area of portals using an other theme that the "CDM D...
Andreas Kohlbecker
09:45 AM bug #5286 (Closed): seemingly duplicate distributions
Andreas Kohlbecker
09:43 AM bug #6454 (Feedback): NumberWithLabelElement.getFloat and .getInteger should return null
Currently it both return 0 if textfield is empty. In some cases this leads to value "0" while null is required.
Befo...
Andreas Müller
09:36 AM bug #6453 (Resolved): Deleting text from min/max fields throws NPE
Applied in changeset commit:taxeditor|66b9cc46fdfd1938cb1f69b6191e9967995d8cf9. Andreas Müller
09:21 AM bug #6453 (In Progress): Deleting text from min/max fields throws NPE
Andreas Müller
09:20 AM bug #6453 (Closed): Deleting text from min/max fields throws NPE
E.g. for GatheringEvent
~~~
login : admin
editor version : 4.5.1
server : api.cybertaxonomy.org (cybertaxonomy....
Andreas Müller
09:36 AM Revision 66b9cc46 (taxeditor): fix #6453 fix NPE in min/max
Andreas Müller
09:36 AM Revision 126723a8 (taxeditor): cleanup
Andreas Müller
08:02 AM Revision 6469b938 (cdm-vaadin): ref #6169 responsive dashboard
Andreas Kohlbecker
07:57 AM Revision 8d1195dc (cdm-vaadin): removing old unused deigns
Andreas Kohlbecker

03/01/2017

12:47 AM bug #6450: New reference with only the protected titleCache set is not found in reference select ...
The problem probably is the wrong selection of the search string. If we search for a nomenclatural reference we must ... Andreas Müller
03:25 PM bug #6450 (New): New reference with only the protected titleCache set is not found in reference s...
If you choose "new Reference" in the reference selection dialog and you enter a new reference with a protected titleC... Andreas Müller
06:05 PM bug #5286 (Feedback): seemingly duplicate distributions
For the issue described in #4411#note-13 I opened a new ticket #6452.
I guess this ticket here can be closed then....
Andreas Müller
06:01 PM feature request #6452: Filter for equal and single subareas
To me there is 1 open question: for maps it sometimes makes sense to have areas only from one level and therefore we ... Andreas Müller
05:54 PM feature request #6452 (New): Filter for equal and single subareas
To avoid duplications in distribution representations it is suggested in #4411#note-13 and #5286 to add an option to ... Andreas Müller
05:21 PM task #6451 (New): Change label "Next" in Specimen Assistant to Advanced, Detail, ...
This is a wish from the BGBM User meeting #4031 Andreas Müller
04:11 PM bug #6349 (Closed): Fix media description handling
Looks good Andreas Müller
03:50 PM task #3603 (Closed): Remove creation of dummy DefinedTerm when creating new Term related entities
Still don't find ModifierSection and ModifierEditorInput. But for the first 2 (PK scope is enabled now) it works as e... Andreas Müller
03:34 PM bug #6309 (Closed): Creating an existing user throws exception
Seems to work Andreas Müller
03:31 PM bug #6439 (Closed): Add (Heft xxx) as part of volume to name parser
Andreas Müller
03:15 PM bug #6449 (In Progress): Nomenclatural references with protected titleCache are not shown correct...
Andreas Müller
03:15 PM bug #6449 (Resolved): Nomenclatural references with protected titleCache are not shown correctly ...
A name with a nomenclatural reference that has only a protected titleCache but not a title, abbrev title or abbrevTit... Andreas Müller
03:08 PM feature request #4490 (Closed): Make the label of the taxon page tabs customizable for portal admins
Andreas Müller
03:07 PM bug #6192: taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is en...
... until then I suggest to implement it within the synonymy as the synonymy is the most likely place the annotation ... Andreas Müller
03:04 PM bug #6192: taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is en...
This needs to be discussed during the BGBM user meeting #6297 Andreas Müller
02:55 PM bug #4390 (Feedback): Titlecache of field unit does not update when changing field unit data via ...
The issue itself seems to be fixed and can be closed.
I opened a related ticket for refreshing the field unit + sib...
Andreas Müller
02:39 PM bug #4390: Titlecache of field unit does not update when changing field unit data via derived uni...

This second parameter in this code to me does not make sense. Is always *false* IMO.
~~~ java
if (!specimen....
Andreas Müller
02:53 PM bug #6448 (New): Update of field unit in details view of derived unit does not update field unit ...
If e.g. locality is changed in derived unit details view in the specimen bulk editor the according field unit record ... Andreas Müller
02:39 PM Revision 958adbe2 (cdmlib): ref #4390 adapt boolean value for protected
Andreas Müller
02:38 PM bug #6447 (Rejected): advanced search doesn't return results
When I try to do an advanced search i don't get any results. Even though the simple search returns results.
The qu...
Saskia Gennrich
02:34 PM feature request #6361 (In Progress): [MASTER] Merge all TaxonName classes into 1 class
Andreas Müller
02:32 PM feature request #6369 (Closed): Create interfaces for TaxonName types
We close this. The remaining tasks will be done when really merging everything. Andreas Müller
02:31 PM bug #6365 (Closed): Merge botanical and zoological names into TaxonNameBase
We close this. The remaining tasks will be done when really merging everything.
External applications will be hand...
Andreas Müller
02:28 PM bug #6446 (New): Merge botanical and zoological names into TaxonNameBase in external applications
e.g. TaxEditor Andreas Müller
02:26 PM task #6362 (Closed): Remove occurrence of NonViralName in code
We close this. The remaining tasks will be done when really merging everything.
Occurrences in external applicatio...
Andreas Müller
02:24 PM bug #6445 (New): Remove occurrence of NonViralName in external applications (TaxEditor etc.)
Andreas Müller
02:22 PM task #6366 (Closed): Merge cultivar names into TaxonNameBase
We close this. The remaining tasks will be done when really merging everything. Andreas Müller
02:21 PM task #6364 (Closed): Merge viral names and bacterial names into TaxonNameBase
We close this. The remaining tasks will be done when really merging everything. Andreas Müller
02:21 PM task #6360 (Closed): Move NonViralName functionality to TaxonNameBase
We close this. The remaining tasks will be done when really merging everything. Andreas Müller
01:42 PM bug #6440: Improve IPNI Name Service
All issues fixed except for the nom.ref. issue => #6444 Andreas Müller
01:16 PM bug #6440 (Resolved): Improve IPNI Name Service
Applied in changeset commit:cdmlib|11f80cdfa3ef9f8255aa448316b7200e59c598b2. Andreas Müller
01:41 PM bug #6444 (New): Improve reference handling for IPNI name service
IPNI name service import is difficult to map for nom. references. Probably this can still be improved.
IPNI has ti...
Andreas Müller
01:37 PM Revision 913eceea (cdmlib): fix #6440 fix IPNI name service test
Andreas Müller
01:16 PM Revision 11f80cdf (cdmlib): fix #6440 implement logging for hybrids in IPNI service
Andreas Müller
01:06 PM Revision 43b500aa (cdmlib): ref #6440 fix most of the IPNI name service issues
Andreas Müller
12:53 PM bug #6432 (Resolved): Apply CSS only to non-admin pages
The fix for this issue is now in the develop branch, so that it will be deployed to the test server. I now can test a... Andreas Kohlbecker
12:49 PM Revision 8fc089e1 (cdm-dataportal): ref #6432 apply css only to non-admin pages
Saskia Gennrich
12:12 PM Revision 1a0eb64e (cdm-vaadin): Merge branch 'responsive-ui-framework' into develop
Andreas Kohlbecker
11:56 AM feature request #6443 (New): Feature block settings: enable sorting of TextData elements
The FeatureBlock settings offer an option to sort the elements this is working only for a few features.
Alphabetic...
Andreas Kohlbecker
11:52 AM feature request #6442: Feature block settings: margins for data in block level elements
I removed the style
~~~css
#Notes .DescriptionElement-TextData {
margin-bottom: 1em;
}
~~~
again from th...
Andreas Kohlbecker
11:49 AM feature request #6442 (Resolved): Feature block settings: margins for data in block level elements
Applied in changeset commit:cdm-dataportal|29f63b48d79e7fa3af080758ee0a261ede9c9d0f. Andreas Kohlbecker
11:30 AM feature request #6442 (Resolved): Feature block settings: margins for data in block level elements
If `div` is selected for the enclosing tag it is often desirable to display the resutling text blocks as paragraphs w... Andreas Kohlbecker
11:48 AM Revision 29f63b48 (cdm-dataportal): fix #6442 p tags as additional option to enclose description ...
Andreas Kohlbecker
11:44 AM bug #6375: footnotes on sensu references must not be prefixed with 'sensu'
please review after the release has been deployed, the test case mentioned in the issue description no longer exists,... Andreas Kohlbecker
11:39 AM bug #6375 (Resolved): footnotes on sensu references must not be prefixed with 'sensu'
Applied in changeset commit:cdm-dataportal|2ce2594abfc0cf93cf72c56332376f02197d5f8b. Andreas Kohlbecker
11:38 AM Revision 2ce2594a (cdm-dataportal): fix #6375 removing 'sensu' from footnote text
Andreas Kohlbecker
10:31 AM Revision d818257c (cdmlib): cleanup
Andreas Müller
10:29 AM Revision 4abc3175 (cdm-vaadin): renaming package and adding LICENSE and README for ui framework
Andreas Kohlbecker
10:04 AM Revision c3b9b63b (cdm-vaadin): adding license for package taken from vaadin
Andreas Kohlbecker
09:55 AM Revision 3ba3b821 (cdm-vaadin): moving cdm popoupeditor to other package
Andreas Kohlbecker
09:54 AM Revision 9b182365 (cdm-vaadin): porting the PopupEditor to spring and cdm
Andreas Kohlbecker

02/28/2017

05:22 PM Revision 9a2ea914 (cdm-vaadin): manual testing of working navigation
Andreas Kohlbecker
05:15 PM bug #6441 (New): FE Areas in advanced search arent sorted
List of Areas in advanced search aren't sorted in any way (http://test.e-taxonomy.eu/dataportal/preview/fauna-europae... Saskia Gennrich
02:45 PM Revision 157460f4 (cdm-vaadin): working NavigationManagerBean, easier VaadinSpringNavigatorConfig...
Andreas Kohlbecker
11:57 AM bug #6440 (Closed): Improve IPNI Name Service
thinks to improve
* Remove empty annotations, basionyms, basionym authors, ...
* Use Configurator instead of pa...
Andreas Müller
10:44 AM bug #6432 (Feedback): Apply CSS only to non-admin pages
Saskia Gennrich
07:55 AM Revision 2b4fe0bb (cdm-dataportal): adapting new lines in test to modified interpretation in brow...
Andreas Kohlbecker

02/27/2017

06:22 PM Revision 43e0fe91 (cdm-vaadin): replacing Vaadin4Spring Event Bus by Spring ApplicationEventPubli...
Andreas Kohlbecker
01:33 PM Revision 683a331c (cdm-vaadin): porting the devday 2016 ui framework to spring - not fully working
Andreas Kohlbecker
01:33 PM Revision f97b0886 (cdm-vaadin): initial UI class for the phycobank
Andreas Kohlbecker
01:33 PM Revision c850e7a9 (cdm-vaadin): attempt to create a responsive layout with menu
Andreas Kohlbecker
01:33 PM Revision a5f65726 (cdm-vaadin): attempt to create a responsive layout with menu
Andreas Kohlbecker
01:33 PM Revision 15f46faf (cdm-vaadin): ref #6169 initial design for main application
Andreas Kohlbecker
01:33 PM Revision aafb7142 (cdm-vaadin): managing dependency org.json:json
Andreas Kohlbecker
01:33 PM Revision e2caccfd (cdm-vaadin): ignoring vaadin designer files
Andreas Kohlbecker
01:33 PM Revision 2d703592 (cdm-vaadin): adding a valo bases edit theme
Andreas Kohlbecker
01:33 PM Revision c62d792f (cdm-vaadin): ignoring vaadin designer settings
Andreas Kohlbecker
01:33 PM Revision 204936fc (cdm-vaadin): adding dependency vaadin-spring-addon-eventbus
Andreas Kohlbecker
01:29 PM Revision 18a0f694 (cdm-vaadin): ref #6410 follow up to adding a new TaxonRelatioshipType comitted...
Andreas Kohlbecker
01:21 PM bug #6439 (Resolved): Add (Heft xxx) as part of volume to name parser
Applied in changeset commit:cdmlib|84c93d927faac985dab1ba3d8c550680cbaf840c. Andreas Müller
01:20 PM bug #6439 (Closed): Add (Heft xxx) as part of volume to name parser
Andreas Müller
01:20 PM Revision 84c93d92 (cdmlib): fix #6439 Add (Heft xxx) as part of volume to name parser
Andreas Müller
01:19 PM feature request #6438 (New): Distinguish bibliographic and nomenclatural search for references in...
Hallo,
bei folgendem Titel habe ich die Angaben zum Buch der Serie geändert, und zwar von „Engl., Pflanzenr. 4(3). 1...
Andreas Müller
12:32 PM Revision dbe39320 (cdm-dataportal): adapting new lines in test to modified interpretation in brow...
Andreas Kohlbecker
12:26 PM Revision 52fe46cc (cdm-dataportal): ref #6158 Update documentation from svn to git
- update links from trac to redmine
- update links to cybertaxonomy.eu
Patrick Plitzner
11:38 AM bug #6437 (New): Always update titleCache for nomenclatural reference
If the title of an inreference (e.g.) journal changes, the title cache of the according reference (e.g. article) usua... Andreas Müller
11:31 AM bug #6436 (New): [DISCUSS] TitleCache update strategy for related objects
Hallo Walter,
ja, das ist ein altes Problem (leider noch viel älter als Remoting). Da wir bei den Formattierern (C...
Andreas Müller
10:35 AM bug #6435 (New): [DISCUSS] Comment field for "Protolog"
WGB: Mir aufgefallen, dass die Angabe „Protolog“ im Editor Detail eigentlich nicht richtig ist, es geht ja eigentlich... Andreas Müller
10:33 AM bug #6434 (New): Add URL for TypeDesignation
WGB: Ein Lektotype muss ja explizit designiert (publiziert!) werden – das ist dann m.A.n. die Referenz, die in der Ty... Andreas Müller
10:24 AM Revision b6f4fe20 (taxeditor): update classpath to 1.8
Andreas Müller
10:14 AM bug #6433: NPE in PartialElement
please review Andreas Müller
10:13 AM bug #6433 (Resolved): NPE in PartialElement
Applied in changeset commit:taxeditor|b01740817b1db8a3ac7b9a1b1292f6a19255a05f. Andreas Müller
10:10 AM bug #6433 (Closed): NPE in PartialElement
Ein “roter” Fehler, der aber übergangen wird – ich habe beim Monat zuerst f eingegeben, Fehler weggedrückt und dann 2... Andreas Müller
10:13 AM Revision b0174081 (taxeditor): fix #6433 fix NPE in PartialElement
Andreas Müller
10:12 AM Revision 8b45c387 (taxeditor): cleanup
Andreas Müller
08:33 AM bug #6099 (Closed): Duration of save is increasing
Hallo ,
ich habe gerade ein paar Test gemacht und da ging das Speichern für das im Ticket genannte Taxon ganz erhe...
Andreas Müller

02/26/2017

11:04 PM feature request #5554 (Resolved): Allow parsing of lat/long with different minute/second characters
Please review Andreas Müller
11:04 PM feature request #5554 (New): Allow parsing of lat/long with different minute/second characters
Andreas Müller
11:02 PM feature request #5554 (Resolved): Allow parsing of lat/long with different minute/second characters
Applied in changeset commit:cdmlib|8cfe0371df8e703dcdc3007579404891915e9d9c. Andreas Müller
11:02 PM Revision 8cfe0371 (cdmlib): fix #5554 lat/long parsing with single and double quotation mark and...
Andreas Müller
10:14 PM bug #6099 (Resolved): Duration of save is increasing
Hi Norbert,
could you please check if this is fixed or at least better now. Probably it was fixed in version 4.4. ...
Andreas Müller
10:04 PM Revision 6ecf5e6f (cdmlib): ref #6365 remove BotanicalName from IPNI service
Andreas Müller
10:02 PM Revision 59b17733 (cdmlib): cleanup
Andreas Müller
09:20 PM feature request #4137 (In Progress): Discuss "Material Sample" as new SpecimenOrObservationType
Andreas Müller
11:24 AM Revision e34ac8d3 (taxeditor): i18n files win compatible
Andreas Müller
11:11 AM Revision 530a12a5 (cdmlib): ref #6410 latest changes for eFlora (FM 15) import
Andreas Müller
11:05 AM Revision 133d0005 (cdmlib): cleanup
Andreas Müller
10:50 AM Revision 6c06606c (cdmlib): add transient method isHybridName (cont.)
Andreas Müller
10:50 AM Revision e39c28b0 (cdmlib): ref #6419 update remaining bean names for cdmRepository
Andreas Müller
10:50 AM Revision cb4b3b25 (cdmlib): ref #6410 handle hybridClass attribute
Andreas Müller
10:50 AM Revision 6efe4dfc (cdmlib): add transient method isHybridName
Andreas Müller
10:50 AM Revision f3668224 (cdmlib): ref #6419 update bean name in CdmApplicationController
Andreas Müller

02/25/2017

12:19 AM bug #6381 (Resolved): Specimen titleCache should include barcode or catalogue number if accession...
Applied in changeset commit:cdmlib|132a52ccb75238b72dd8a321bc572ec9911c6944. Andreas Müller
12:18 AM Revision 132a52cc (cdmlib): fix #6381 Also use barcode or catalogue number for titlecache if acce...
Andreas Müller
 

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