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From 11/09/2019 to 12/08/2019

12/07/2019

06:11 PM bug #8312 (In Progress): Test, fix, improve and run Transmission engine for E+M
Andreas Müller
06:07 PM feature request #6352 (Duplicate): Add Transmission Engine trigger to Admin menu
Andreas Müller
09:57 AM Revision ff19d87a (cdmlib): ref #8679 add done() to monitoring if unexpected exception occurred.
Andreas Müller
09:57 AM Revision 49c84c83 (cdmlib): add getNameCache(name, tagRules) to INameCacheStrategy
Andreas Müller

12/06/2019

10:04 PM bug #8754 (New): DescriptionElements are not deleted with the Descriptive Data Set
Based on the dump and situation in #8752:
* deleted both descriptive datasets
* delete the Character threes (for ...
Andreas Kohlbecker
09:53 PM bug #8753 (New): EagerLoadingException on opening Character Tree Editor after deleting all Descip...
Based on the dump and situation in #8752:
* deleted both descriptive datasets
* Immediately open the Character T...
Andreas Kohlbecker
09:44 PM bug #8752 (New): Matrix Editor: Can fails showing all SpecimenDescriptions in the dataset
It seems as if the DescriptiveDataset has been corrupted somehow.
1. I removed all "specimens" from the matrix at ...
Andreas Kohlbecker
06:19 PM bug #8747 (New): Matrix Editor: Can not unset categorical data
I don't consider this as user friendly. Is this default behavior of the nattable?
Since there are check boxes in t...
Andreas Kohlbecker
12:21 PM bug #8747 (Resolved): Matrix Editor: Can not unset categorical data
You have to hold CTRL and select the chosen state again to de-select. Patrick Plitzner
06:16 PM bug #8746: Multiple representations problem on saving Matrix Editor
Patrick Plitzner wrote:
> Did you just enter categorical and quantitative data?
> Did you only enter data for this...
Andreas Kohlbecker
12:23 PM bug #8746 (Feedback): Multiple representations problem on saving Matrix Editor
Did you just enter categorical and quantitative data?
Did you only enter data for this one specimen?
Did you edit a...
Patrick Plitzner
04:03 PM Revision 66de5a6c (taxeditor): ref #8450 Fix refresh after changes
Patrick Plitzner
03:44 PM bug #8744 (Resolved): LazyInitializationException (LIE) saving the Character Editor
This seems to be fixed now by using merge(). We still have to have a look at TermTreeEditor which currently still use... Patrick Plitzner
02:05 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
hmm, it does not really seem to be the problem, but I found that there seems no session to be defined
![](picture1...
Andreas Müller
01:25 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
After changing the users such that only 1 user was attached to all data like TermRelation, DefinedTermBase, TermVocab... Andreas Müller
01:13 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
We need to test the behavior if data is edited with different users, it seems like at least one user (former user - u... Andreas Müller
01:11 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
I do not understand how we can have a LIE within a save. With save all objects should be within the session by Merge.... Andreas Müller
03:42 PM bug #8751 (New): Replace saveOrUpdate() in AbstractTermTreeEditor
Unexpectedly saveOrUpdate() is used instead of merge().
Currently, if you change to merge() an exception is thrown...
Patrick Plitzner
03:36 PM Revision 64be1450 (taxeditor): ref #8744 Use merge in CharacterEditor.save()
Patrick Plitzner
02:18 PM Revision 1cfa8b28 (taxeditor): update layer doc
Patrick Plitzner
01:58 PM Revision fe281c15 (taxeditor): ws for biocase provider moved
Katja Luther
01:41 PM feature request #8750 (New): Write tests for service layer methods getting the specimens for an a...
The service method for getting all specimen for an associated taxon needs tests:
The method should return all spec...
Katja Luther
01:27 PM Revision b9f38c00 (taxeditor): ref #8749: sort elements of vocabulary combo
Katja Luther
01:18 PM bug #8748 (In Progress): Supported state vocabularies should be ordered
Now there is a filter for the combo boxes. Katja Luther
11:17 AM bug #8748 (In Progress): Supported state vocabularies should be ordered
For characters there is a long list of state vocabularies now. Therefore they are difficult to find in the dropdown. ... Andreas Müller
01:17 PM feature request #8749 (Duplicate): Add proposalProvider to AbstractComboElement
Katja Luther
01:15 PM feature request #8749 (Duplicate): Add proposalProvider to AbstractComboElement
To provide the filter to all combo elements add the proposalProvider to the AbstractComboElement.
This is used for...
Katja Luther
01:16 PM Revision a5a9ec69 (taxeditor): ref #8749: add proposalProvider to combo elements
Katja Luther
11:59 AM feature request #7071: Reenable restore functionality
Idea:
* After CdmStore has connected invoke "open Part" command on saved editors.
* EditorInput/UUID can be sav...
Patrick Plitzner
09:20 AM Revision cbf13384 (taxeditor): ref #8677: rank combo contains rank of selected taxon
Katja Luther

12/05/2019

05:20 PM bug #8747 (New): Matrix Editor: Can not unset categorical data
Once categorical data state has been set in a cell this cell can not be made blank Andreas Kohlbecker
05:01 PM bug #8744 (In Progress): LazyInitializationException (LIE) saving the Character Editor
Patrick Plitzner
04:59 PM bug #8744 (Resolved): LazyInitializationException (LIE) saving the Character Editor
Applied in changeset commit:taxeditor|5fa6172961481d22d6282abc10b4c350fe1c8bce. Patrick Plitzner
04:58 PM Revision 5fa61729 (taxeditor): fix #8744 Fix LIE while saving character editor
Patrick Plitzner
04:38 PM bug #8746 (Feedback): Multiple representations problem on saving Matrix Editor

we did several edits in the matrix for multiple specimens.
Last edit was setting the the state for leave architect...
Andreas Kohlbecker
04:33 PM bug #8745 (Resolved): Type designations of synonyms missing on specimen page
please review Katja Luther
04:31 PM bug #8745 (Resolved): Type designations of synonyms missing on specimen page
Type designations of synonyms are missing in the compressed specimen page.
Katja Luther
04:30 PM Revision ca25238c (cdmlib): fix missing type designations of synonyms on specimen page
Katja Luther
04:26 PM Revision 64c04c7d (taxeditor): ref #8450 Fix refresh of character tree after adding characters
Patrick Plitzner
04:25 PM Revision a494d916 (cdm-dataportal): add class name to type designation exception
Katja Luther
04:23 PM Revision 5fedf5d5 (taxeditor): ref #8450 Do not show sec reference in matrix
Patrick Plitzner
02:57 PM Revision 3c162754 (cdmlib): ref #8679 top level error handling and renaming aggregation methods
Andreas Müller
02:36 PM Revision 851664fd (cdmlib): ref #8679 try to fix progress tasks and percentage not showing up
Andreas Müller
02:35 PM Revision 9cabea44 (cdmlib): cleanup
Andreas Müller
02:20 PM feature request #8677 (In Progress): Add distribution aggregation to set subtree menu
Open issues:
* ~~highest rank should include the rank of the selected taxon~~
* ~~lowest rank should inlcude th...
Andreas Müller
02:10 PM Revision e6b6fbe5 (taxeditor): ref #8677 minor tooltip changes
Andreas Müller
08:20 AM Revision c6883acf (cdmlib): ref #8679 Add test for incomplete categorical data
pplitzner

12/04/2019

10:40 PM bug #6629 (Closed): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to high...
NK: Ist jetzt OK. Andreas Müller
02:34 PM bug #6629 (Resolved): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to hi...
For Acanthoscephalus, Heteroderis, Crepis and Lagoseriopsis the aggregation seems to work now. For Cichorium intybus ... Andreas Müller
06:57 PM bug #8744 (Resolved): LazyInitializationException (LIE) saving the Character Editor
saving the Character Editor after changing the Character Node details causes an LazyInitializationException every tim... Andreas Kohlbecker
05:58 PM Revision 475575b3 (cdmlib): Fix gcTime calculation
Patrick Plitzner
05:58 PM Revision 2a71dd1c (cdmlib): ref #8679 Add cancel points for aggregation progress monitor
Patrick Plitzner
05:58 PM Revision 80c4e54e (cdmlib): ref #8679 Filter out cloned specimen descriptions
Patrick Plitzner
05:29 PM bug #8743 (New): BioCASE specimen import: ignore invalid biocase accesspoint urls
This is especially important for the DNA import. If an URL is specified which is not pointing to a BioCase provider t... Andreas Kohlbecker
02:51 PM Revision 724c463a (taxeditor): ref #8677: correct enabling and disabling of elements
Katja Luther
02:50 PM feature request #8742 (New): Allow deleting vocabularies
Currently it is not possible to delete a vocabulary if it contains terms.
With OWL import (additivity) it is now pos...
Andreas Müller
02:39 PM Revision 5373a0e9 (taxeditor): ref #8677: fix wrong type
Katja Luther
02:37 PM Revision 80e27bc2 (cdmlib): fix compile error
Andreas Müller
02:28 PM Revision c274b9cc (taxeditor): ref #8677: smaller issues
Katja Luther
02:18 PM Revision ef976e5a (taxeditor): ref #8677: set default selections, sort combos and other smaller i...
Katja Luther
02:07 PM Revision 19739293 (cdmlib): ref #8679 rename supports fields and make public
Andreas Müller
02:01 PM Revision aaafab4d (cdmlib): make misappliedName uuid public (needed for PESI)
Andreas Müller
02:01 PM Revision 47992818 (cdmlib): ref #8679 let AggregationMode and AggregationSourceMode implement IKe...
Andreas Müller
01:37 PM Revision de4502ef (taxeditor): ref #8679 Adapt to cdmlib changes
Patrick Plitzner
01:20 PM Revision 5ee7595c (cdmlib): ref #8679 move aggregation modes to own class file
Andreas Müller
11:48 AM Revision 25a98c3f (cdmlib): ref #8677: getNamedAreaDTO
Katja Luther
11:47 AM Revision 629035f4 (cdmlib): ref #8677: getNamedAreaDTO
Katja Luther
11:18 AM Revision 5bafde13 (cdmlib): ref #8450 Fix quantitative data + add test
Patrick Plitzner
10:12 AM task #8741 (New): Create test for MapServices to test if they support https
This especially tests if the existing certificate is still valid. Andreas Müller
09:53 AM Revision 70946cb4 (taxeditor): ref #8677: layout and labeling in aggregation config wizard
Katja Luther
09:38 AM Revision 882f3d24 (cdmlib): add left join for level in ternmDto sql query
Katja Luther
09:38 AM Revision 3fb760db (cdmlib): fix cdmlight export test
Katja Luther

12/03/2019

06:37 PM feature request #8721: Use webservice to get all biocase provider listed by gbif
I agree with the above. Maybe the title is enough. Users usually recognize a collection by its title not it's service... Andreas Müller
06:24 PM feature request #8721: Use webservice to get all biocase provider listed by gbif
The access points should be searchable also by the accesspoint title, For the BGBM Herbarium the webservice lists th... Andreas Kohlbecker
06:32 PM feature request #8740 (New): BioCASE specimen import: implement data set filter in specimen impor...
once an access point has been selected in the fist step it should be possible to limit the search to a specific data ... Andreas Kohlbecker
05:31 PM Revision 98fb83d7 (cdmlib): ref #8450 Set max to min if max null and vica versa
- static method Patrick Plitzner
05:28 PM Revision 693b87f5 (cdmlib): ref #8450 Set max to min if max null and vica versa
Patrick Plitzner
04:35 PM feature request #8657: Order description element in portal according to CharacterTree
Can you provide an example url? Andreas Müller
12:14 PM feature request #8657: Order description element in portal according to CharacterTree
Assignin to you Andreas M.
But maybe also Andreas K. needs to look at the code
Patrick Plitzner
04:34 PM Revision 2fc6f4c0 (cdmlib): set monitor methods to protected in DescriptionAggregationBase
Andreas Müller
04:28 PM Revision a4ca6fce (cdmlib): ref #8679 Add sources to aggregated description
- within taxon: specimen description
- parent taxon: aggregated taxon description
Patrick Plitzner
03:15 PM feature request #8713 (Resolved): Improve structured descriptive data aggregation
At least tests exist now and also base class algorithm is used. Can you please review and put open issues into a foll... Andreas Müller
02:20 PM Revision 20245cca (cdm-dataportal): ref #8595 Do not filter description sources by class
Patrick Plitzner
02:15 PM bug #8670: Unwanted distribution aggregation/display on 2 levels
Auch hier bitte einen letzten Check ob noch was offen ist.
Anschließend können wir das Ticket schließen.
Andreas Müller
02:14 PM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
I think this is fully fixed with the new implementation of the transmission engine (which allows the user to decide t... Andreas Müller
02:08 PM feature request #5176 (Closed): TransmissionEngineDistribution can run on selected taxa
This should be fully fixed. As it has been used already and also a TaxEditor UI for using it has been developped I cl... Andreas Müller
01:49 PM feature request #8472 (Closed): Transmission engine for distribution aggregation needs to be adap...
Andreas Müller
01:48 PM Revision 412b2eee (cdmlib): ref #8472 remove final links to old MarkerType.COMPUTED handling
Andreas Müller
01:41 PM task #8468 (Closed): Remove old InapplicableIf tables
Andreas Müller
01:40 PM bug #8738 (Closed): CdmLink.startPos and .endPos should allow Null
Andreas Müller
01:40 PM bug #8702 (Closed): Remove Not null constraint for uuid in AUD tables
Andreas Müller
01:09 PM Revision 03d98738 (taxeditor): ref #8738 , ref #8702 , ref #8468 update TaxEditor test DB
Andreas Müller
01:09 PM Revision bcac7f33 (taxeditor): minor
Andreas Müller
01:07 PM Revision 86493549 (cdm-vaadin): ref #8738 , ref #8702 , ref #8468 update vaadin test DB
Andreas Müller
01:06 PM Revision b9b25534 (cdmlib): ref #8738 , ref #8702 , ref #8468 last changes for 5.12 update script
Andreas Müller
12:30 PM Revision 06d7ad52 (cdm-dataportal): ref #8595 Fix potential null pointer
Patrick Plitzner
12:21 PM feature request #8714: Handle multiple datasets for portal description detail page
To review you would have to manually add a description to multiple datasets in the database. There is no test data li... Patrick Plitzner
12:19 PM feature request #8595: Create description detail page
created new ticket for remaining issues and discussion -> #8739
Patrick Plitzner
12:17 PM bug #8739 (New): remaining issues for description detail page
Copied from #8595
* Evtl. will man auf aggr. Description von höheren Taxa nicht die Specimen als Quellen anzeigen,...
Patrick Plitzner
09:43 AM Revision dacb449b (cdmlib-apps): minor
Andreas Müller
09:39 AM Revision c64d9f63 (taxeditor): ref #8450 Remove aggregation/summary row
Patrick Plitzner
09:26 AM Revision ab5959ce (taxeditor): ref #8450 Remove charts and tooltip button
Patrick Plitzner
09:15 AM Revision 44e7eed6 (taxeditor): ref #8450 Disable re-ordering of columns
Patrick Plitzner
09:14 AM Revision b533829a (taxeditor): ref #8450 Fix freeze column index
Patrick Plitzner

12/02/2019

05:32 PM Revision b6143fd1 (cdmlib): cleanup
Andreas Müller
05:24 PM Revision 9f6ce960 (cdmlib): fix potential NPE when retrieving identifiers via type == null
Andreas Müller
04:56 PM Revision 0d1a8c63 (cdmlib): cleanup
Andreas Müller
04:53 PM Revision 1cbe14bb (cdmlib): cleanup
Andreas Müller
04:46 PM Revision 86c08d73 (taxeditor): Add tooltip to TermSearch menu item
Patrick Plitzner
04:35 PM Revision 287ae15a (taxeditor): ref #8450 Fix matrix taxon node hierarchy
Patrick Plitzner
03:56 PM Revision 7dd0d600 (cdmlib): ref #8766 Fix potential ArrayIndexOutOfBoundsException
Patrick Plitzner
03:43 PM Revision 57b6d909 (cdmlib): ref #8468 replace Inapplicable tables in ClearDB files (remaining)
Andreas Müller
03:39 PM Revision f7a5f872 (cdmlib): ref #8766 remove a.level from TermDto SELECT statement
Patrick Plitzner
03:24 PM Revision dfbe0f52 (cdmlib): ref #8468 replace Inapplicable tables in ClearDB files
Andreas Müller
03:05 PM Revision 2fcd811a (cdmlib): ref #8468 further fix test schema
Andreas Müller
02:19 PM Revision 32d3420e (cdmlib): ref #8468 fix model cache and test sql
Andreas Müller
01:33 PM Revision 69b55e11 (cdmlib): ref #8766: add level to TermDto
Katja Luther
01:29 PM Revision 07b9b244 (taxeditor): ref #8679 Set taxon node filter and no batch size adaption
Patrick Plitzner
01:28 PM Revision 34726589 (cdmlib): ref #8679 Add initTransaction() super method
- hook for initializing object when a new transaction starts Patrick Plitzner
01:28 PM Revision b1b9414c (cdmlib): typo
Patrick Plitzner
01:27 PM Revision 26024c71 (taxeditor): ref #8677: layout issues - continue
Katja Luther
01:21 PM Revision f67d22e7 (taxeditor): ref #8677: layout issues
Katja Luther
12:54 PM Revision b58f9986 (cdmlib): minor
Andreas Müller
12:54 PM Revision 9e5a8c54 (cdmlib): ref #8468 fix JAXB for removed inapplicableIF
Andreas Müller
12:31 PM feature request #8433 (Duplicate): Disallow user names with whitespace
This is a duplicate for #8454 and has been fixed in CDM UML 5.8 Andreas Müller
12:26 PM task #8468 (Resolved): Remove old InapplicableIf tables
Applied in changeset commit:cdmlib|73391892ccf6af23d1f83357e460ea9b55df4e2d. Andreas Müller
12:26 PM Revision a2c8f975 (cdmlib): ref #8468 remove old attributes from TermNode
Andreas Müller
12:25 PM Revision 65397e52 (cdmlib): rename TableDroper -> TableDropper
Andreas Müller
12:23 PM Revision 73391892 (cdmlib): fix #8468
Andreas Müller
12:23 PM Revision cdaeac9a (cdmlib): ref #8738 , ref #8702 add update script to remove null constraints fr...
Andreas Müller
12:12 PM bug #8702 (Resolved): Remove Not null constraint for uuid in AUD tables
Andreas Müller
12:12 PM bug #8738 (Resolved): CdmLink.startPos and .endPos should allow Null
Andreas Müller
10:55 AM bug #8738 (Closed): CdmLink.startPos and .endPos should allow Null
The table was IntextReference before. After using it for class CdmLinkSource also the originally NOT NULL columns mus... Andreas Müller
12:11 PM Revision dc5a41f6 (cdmlib): ref #8738 , ref #8702 add update script to remove null constraints fr...
Andreas Müller
12:09 PM Revision 38f1e0aa (cdmlib): cleanup
Andreas Müller
12:01 PM Revision c3193e02 (cdmlib): rename SchemaUpdater v5.x packages
Andreas Müller
11:32 AM bug #8737 (Resolved): delete taxon included in two classifications deletes taxonname
Now there is also the possibility to set the taxonnode configurator to deletetaxon = false. This was missing in the d... Katja Luther
09:42 AM bug #8737: delete taxon included in two classifications deletes taxonname
please review. Katja Luther
09:35 AM bug #8737 (Resolved): delete taxon included in two classifications deletes taxonname
when deleting a taxon used in two classifications, the taxon still exist, but the name is deleted. This is because of... Katja Luther
11:28 AM Revision a66ea40a (taxeditor): ref #8737: add possibility to delete taxonnode wizard for only del...
Katja Luther
10:35 AM bug #8733: Descriptive data set: Specimen of newly added taxon are not listed in Select Specimen ...
This ticket is complex. In the ticket description is not written HOW the taxon is added. In general the underlying se... Andreas Müller
08:24 AM bug #8733 (Feedback): Descriptive data set: Specimen of newly added taxon are not listed in Selec...
Currently the specimens listed in the specimen selection dialog are cached after the first time opening the dialog be... Patrick Plitzner
08:40 AM feature request #8665 (Resolved): Rename "New" to "New Tree" in Term Tree editors
Applied in changeset commit:taxeditor|210af90ccae0c45e1234bdb8fe216285293546c6. Patrick Plitzner
08:40 AM Revision 210af90c (taxeditor): fix #8665 Show human readable term type in new tree string
Patrick Plitzner
08:37 AM bug #8732 (Duplicate): Descriptive Data Set Navigator: label not refreshed after change in Descri...
This is already solved for release 5.12 with #8661
Please validate with the current nightly build.
Patrick Plitzner
08:15 AM Revision 6f4db5c3 (taxeditor): remove system.out
Patrick Plitzner
07:40 AM Revision 9a2d6065 (cdmlib): ref #8679 Set batchMinFreeHeap in test setup
Patrick Plitzner

11/29/2019

05:17 PM bug #8736 (New): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
To reproduce:
* use database: caryophyllales_spp (cactaceae)
* create new Descriptive Dataset (son specimens so f...
Andreas Kohlbecker
04:27 PM Revision 73f2833f (cdmlib-apps): cleanup
Andreas Müller
04:20 PM Revision b4e7eccb (cdmlib-apps): #3945 move some PESI classes to new packages and minor issues
Andreas Müller
04:09 PM task #7976 (In Progress): [PESI][ERMS] Erms taxon import
Andreas Müller
04:09 PM task #8509 (In Progress): [PESI][ERMS] Export ERMS data to PESI
Andreas Müller
04:06 PM task #8577 (In Progress): [PESI][E+M] Validation for E+M export
Andreas Müller
03:35 PM bug #8735 (New): Character Node Editor: allow line breaks at slashes in structure representation

The line wrapping does not work for long structure representation. Breaks only happen where the term labels contain...
Andreas Kohlbecker
01:48 PM Revision 45ca2f16 (cdmlib): ref #8679 Replace existing description elements in re-aggregation
-add test for re-aggregation Patrick Plitzner
12:58 PM Revision 91f2c632 (cdmlib): ref #8679 Load dataset in each session
Patrick Plitzner
11:28 AM task #8734 (Closed): Update distributions from TDWG-L4 to TDWG-L3 where L4=L3
Andreas Müller
10:34 AM task #8734 (In Progress): Update distributions from TDWG-L4 to TDWG-L3 where L4=L3
SQL to use
~~~
UPDATE DescriptionElementBase deb
INNER JOIN DefinedTermBase a ON deb.area_id = a.id
INNER JOIN ...
Andreas Müller
10:33 AM task #8734 (Closed): Update distributions from TDWG-L4 to TDWG-L3 where L4=L3
This will shorten the textuell representations of distribution data in the data portal Andreas Müller
01:49 AM bug #8731 (Resolved): BioCase Specimenimport: empty result list and SWTException:Invalid thread a...
now it works again with the nightly build. Katja Luther
01:44 AM Revision c11b0cd2 (taxeditor): data cleaning
Katja Luther
01:30 AM Revision 7b017c3e (taxeditor): test other exception handling
Katja Luther
01:07 AM Revision 947597cb (cdmlib): fix test
Katja Luther

11/28/2019

12:47 AM bug #8731 (In Progress): BioCase Specimenimport: empty result list and SWTException:Invalid threa...
This is strange, I can not reproduce this with an editor started from the workspace, also when using the actual git d... Katja Luther
03:45 PM bug #8731: BioCase Specimenimport: empty result list and SWTException:Invalid thread access in se...
An import of specimens is not possible wit the current code base in the development branch. Andreas Kohlbecker
03:40 PM bug #8731 (Resolved): BioCase Specimenimport: empty result list and SWTException:Invalid thread a...
I am not sure about the timing of the situation in which this exception occurred.
I was searching the `http://ww3....
Andreas Kohlbecker
12:32 AM Revision 5adfd05a (taxeditor): ref #8731: minor
Katja Luther
12:11 AM Revision 9b954e94 (cdmlib): add check for taxon and name in test
Katja Luther
12:03 AM Revision 25f62069 (cdmlib): fix delete problems of taxa used in multiple classifications
Katja Luther
06:57 PM bug #8733 (Feedback): Descriptive data set: Specimen of newly added taxon are not listed in Selec...
to reproduce
1. create Descriptive data set
2. open the matrix editor and **keep it open from now on**
2. add a ...
Andreas Kohlbecker
06:33 PM bug #8732 (Duplicate): Descriptive Data Set Navigator: label not refreshed after change in Descri...
just exactly what is written in the subject.
Andreas Kohlbecker
03:55 PM Revision ec07174a (cdmlib-apps): fix E+M Activator
Andreas Müller
03:54 PM Revision 46ae6d5a (taxeditor): ref #8679 Set taxon node filter and aggregation mode
Patrick Plitzner
03:54 PM Revision 7079d656 (cdmlib-apps): cleanup
Andreas Müller
03:53 PM Revision 456a8f57 (taxeditor): Fix potential NPE
Patrick Plitzner
03:52 PM Revision 2adab869 (cdmlib-apps): update BgbmInstancesUpdater
Andreas Müller
03:31 PM Revision 33373464 (cdmlib): ref #8679 Remove usage of apache commons math
Patrick Plitzner
03:31 PM Revision 2bc176df (cdmlib): Enhance toString()
Patrick Plitzner
03:31 PM Revision 2b226eee (cdmlib): ref #8679 Add checks and repairs for valid quantitative data
Patrick Plitzner
03:23 PM bug #8730 (New): OWL Term export progress monitor reports wrong process percentage
The initial percentage is really funny:
![](picture396-1.png)
Andreas Kohlbecker
12:30 PM Revision 4bbc2279 (cdmlib): minor
Andreas Müller
12:29 PM bug #8720: blank perspective after using "Switch User"
the perspective looked like this:
![](picture283-1.png)
today is the first day this is not happening for quite ...
Andreas Kohlbecker
12:05 PM bug #8720: blank perspective after using "Switch User"
I am not sure if I fully understand the problem. When I try to change the user I get the "Taxonomic" perspective but ... Andreas Müller
12:18 PM Revision 5ef244fc (cdmlib): ref #8679 Convert to base class aggregation architecture
- convert aggregation of quantitative data to parent
- convert aggregation of categorical data to parent
Patrick Plitzner
12:18 PM Revision ba1bc425 (cdmlib): Enhance toString()
Patrick Plitzner
12:18 PM Revision 93c52359 (cdmlib): ref #8679 Convert to base class aggregation architecture
- init dataset in preAccumulate
- filter SpecimenDescriptions by data set
Patrick Plitzner
12:18 PM Revision 7903d041 (cdmlib): ref #8679 PropertyPath and code cleanup
Patrick Plitzner
12:18 PM Revision 497e4d3a (cdmlib): add toString()
Patrick Plitzner
12:18 PM Revision 1eb0391c (cdmlib): Add count to toString()
Patrick Plitzner
12:18 PM Revision 1f0292f8 (cdmlib): ref #8679 Convert to base class aggregation architecture
- convert aggregation of categorical data within taxon Patrick Plitzner
12:18 PM Revision 54ed2cf2 (cdmlib): ref #8679 Add apache commons math to pom
Patrick Plitzner
12:18 PM Revision 185e63ee (cdmlib): ref #8679 Convert to base class aggregation architecture
- convert aggregation of quantitative data within taxon Patrick Plitzner
11:51 AM bug #8729: Refresh Taxon Navigator after Specimen import
Seems to be very similar to #8659. So we may think about putting it also to 5.12. Katja, what do you think? Andreas Müller
10:54 AM bug #8729 (New): Refresh Taxon Navigator after Specimen import
After a successful specimen import vi BioCASE Provider the Taxon Navigator is not being refreshed.
New created Clas...
Andreas Kohlbecker
11:03 AM Revision 0e6482c8 (cdmlib): ref #8724 fix JAXB for CdmLink
Andreas Müller
10:04 AM Revision 4cda0d0e (cdmlib): ref #7623: fix NPE
Katja Luther
09:34 AM bug #8728: Specimen import via BioCASE silently fails
Andreas Kohlbecker wrote:
> The problem in one specific case was that the user was not permitted to update a person:...
Andreas Müller
09:26 AM bug #8728: Specimen import via BioCASE silently fails
Next Problem:
~~~
[CREATE] not permitted for 'kurs1' on TaxonNode[uuid:79c3deac-ee1d-4622-91fa-746be0894161', toS...
Andreas Kohlbecker
08:51 AM bug #8728: Specimen import via BioCASE silently fails
The problem in one specific case was that the user was not permitted to update a person:
~~~
[UPDATE] not permitt...
Andreas Kohlbecker

11/27/2019

04:42 PM bug #8728: Specimen import via BioCASE silently fails
As the import works without problems with the `admin` user, it seems as if this is a permission problem.
@Katja: 1...
Andreas Kohlbecker
04:24 PM bug #8728: Specimen import via BioCASE silently fails
this is reproducible
once this error has occurred the taxeditor has to be restarted, otherwise further import atte...
Andreas Kohlbecker
04:15 PM bug #8728 (New): Specimen import via BioCASE silently fails
ABCD Specimen import via BioCASE provider silently fails
Logged in as user with GAs: `Editor` + `TAXONNODE.[CREATE...
Andreas Kohlbecker
03:39 PM EDIT Platform Etablierung task #8727 (In Progress): Test Workshop workflow
Andreas Kohlbecker
03:21 PM EDIT Platform Etablierung task #8727 (In Progress): Test Workshop workflow
**Use the simple editor user accounts: kurs1..5**
The section of taxa to test the workflow with is based in the ...
Andreas Kohlbecker
03:00 PM Revision 700aa970 (cdmlib): Fix potential NPE
Patrick Plitzner
02:58 PM Revision 5a36818d (cdmlib): ref #8724 handle taxon in CdmLinkSource
Andreas Müller
02:39 PM feature request #8686: Support CdmLink sources in bibliography
Further more there is a discussion if links to taxa should be direct links from the description(element) to the taxon... Andreas Müller
02:38 PM feature request #8686: Support CdmLink sources in bibliography
Support for link to taxa has been added in #8724. So we need to check or implement that also links to taxa are handle... Andreas Müller
02:36 PM feature request #8724 (Resolved): Allow OriginalSource to link to Taxon
Andreas Müller
02:25 PM feature request #8724 (Resolved): Allow OriginalSource to link to Taxon
When aggregating (or moving) data one may want to link to the taxon the data originally comes from so we need a possi... Andreas Müller
02:35 PM feature request #8726 (New): the search preference search field should be a list
The preference defining the search field should be not a single value, but a list of fields on which the seach should... Katja Luther
02:34 PM feature request #8725 (New): Add abbrev to namedArea text field
Some named areas have the same label therefore it would be nice to show an abbreviation like idInVoc. This should be ... Katja Luther
02:31 PM Revision 35a4f2f3 (cdmlib): ref #8724 add Taxon to ICdmTarget
Andreas Müller
02:31 PM Revision 41e8eb66 (cdmlib): minor
Andreas Müller
02:28 PM Revision de51cd68 (cdmlib): ref #7623: improve gathering agent parsing and query generation
Katja Luther
02:24 PM Revision f084efb4 (taxeditor): ref #8677: layout issues in aggregation dialog
Katja Luther
09:41 AM feature request #8721 (In Progress): Use webservice to get all biocase provider listed by gbif
The prefilled combo and the filtering for entered text is implemented in the specimen dialog now. Katja Luther
09:38 AM Revision 14a62f14 (taxeditor): ref #8721: use webservice to get all biocase provider
Katja Luther
09:18 AM Revision cf6340d0 (cdmlib): ref #8679 Test leaf color
Patrick Plitzner
09:11 AM bug #8723 (New): Distribution detailsview: changing the area removes the state
When changing the area of a distribution the status is not displayed anymore. But the distribution still has the stat... Katja Luther
08:57 AM Revision 5125fb32 (cdmlib): fix NPE in media rights part of biocase import
Katja Luther
07:31 AM Revision eace364b (cdmlib): ref #8679 Add leaf color
pplitzner

11/26/2019

06:41 PM Revision 6b6ebf81 (cdmlib): ref #8679 Refactoring
pplitzner
06:16 PM Revision 4bf5063f (cdmlib): ref #8679 Add specimen to sibling taxon
pplitzner
05:48 PM Revision c14bf2dc (cdmlib): Avoid empty description elements
Patrick Plitzner
05:09 PM Revision 9af9bac7 (taxeditor): ref #8679 adapt TaxEditor to changes in DescriptionAggregation dat...
Andreas Müller
05:06 PM Revision 3177d9fb (taxeditor): ref #8679 adapt TaxEditor to changes in DescriptionAggregation dat...
Andreas Müller
05:01 PM Revision f34d4889 (cdmlib): adapt TestAggregations to areaUuidList (2)
Andreas Müller
04:45 PM Revision 79e76c25 (cdmlib): adapt TestAggregations to areaUuidList
Andreas Müller
04:42 PM Revision ab856113 (cdmlib): update TestAggregations
Andreas Müller
04:39 PM Revision 672c7781 (cdmlib): Avoid empty description elements
Patrick Plitzner
04:32 PM Revision 84b66dd2 (cdmlib): cleanup
Andreas Müller
04:32 PM Revision d22d2ab0 (cdmlib): ref #8679 add tests to StructuredDescriptionAggregation and fix toGra...
Andreas Müller
04:09 PM EDIT Platform Etablierung task #8722 (New): Provide Manuals and Dokumentation for the Kurs „Integrated Taxonomy“ WiSe 2019/20
Documentation needed for the Kurs:
* Matrix-Editor manual - is being prepared ...
* List of user accounts for dem...
Andreas Kohlbecker
03:59 PM EDIT Platform Etablierung task #8712 (Closed): Kurs "Integrated Taxonomy" : prepare setup for workshop computers
Andreas Kohlbecker
03:01 PM Revision 1520e79e (cdmlib): implement another possibility of gathering agent text in abcd (agentT...
Katja Luther
02:53 PM feature request #8721 (In Progress): Use webservice to get all biocase provider listed by gbif
For the specimen search it would be nice to have a list of all biocase provider. (Jörg provided us a webservice)
W...
Katja Luther
01:39 PM Revision 515150ac (cdmlib): ref #8677: revert a change of last commit
Katja Luther
12:58 PM Revision ff7c0745 (cdmlib): ref #8677: use changes DistributionAggregationConfig in controller
Katja Luther
12:31 PM Revision 68362152 (taxeditor): ref #8677: add distribution aggregation as long running task to ed...
Katja Luther
12:10 PM Revision 421a91e6 (taxeditor): smaller changes in specimen import view
Katja Luther
12:10 PM Revision 44ba5690 (taxeditor): ref #8677: add distribution aggregation as long running task to ed...
Katja Luther
12:08 PM Revision 26cfae1e (cdmlib): ref #8677: use uuid list instead of namedArea list in DistributionAgg...
Katja Luther
10:43 AM bug #8720 (New): blank perspective after using "Switch User"
When switching the user *General > Switch User* all views and editors are closed, making the perspective blank. After... Andreas Kohlbecker
09:19 AM bug #8719 (Resolved): installation profile 'CDM_Portal' causes Integrity constraint violation: 10...
Applied in changeset commit:cdm-dataportal|56d39875a598bad7e9c7591d5436b0ac63160cae. Andreas Kohlbecker
08:23 AM bug #8719 (Resolved): installation profile 'CDM_Portal' causes Integrity constraint violation: 10...
this bug has been discovered in the process of automatic creation of workshop servers (`server-scripts/workshop-setup... Andreas Kohlbecker
09:19 AM Revision 56d39875 (cdm-dataportal): fix #8719 add missing page and cache values for new blocks in...
Andreas Kohlbecker

11/25/2019

12:01 AM Revision 775d38e1 (cdmlib): ref #8469 avoid merge to singular branches
Andreas Müller
10:54 PM Revision 9415e8dd (cdmlib): cleanup
Andreas Müller
10:53 PM Revision dd864603 (cdmlib): ref #8469 fix min max issue
Andreas Müller
07:32 PM Revision ca93e81e (cdmlib): ref #8469 handle all sub-branch taxa on the level they belong to
Andreas Müller
02:51 PM feature request #8460: Show examples in text field
Try to implement a base functionality.
This is already implemented in taxon search.
Andreas Müller
12:14 PM Revision d1504e5a (cdmlib): ref #8469 first handling of taxa covering all subbranches, but probab...
Andreas Müller
12:14 PM Revision 85d65189 (cdmlib): ref #8469 fix no feature left, prepare taxon covering all subbranches...
Andreas Müller
12:14 PM Revision cde6a65d (cdmlib): cleanup
Andreas Müller
09:00 AM Revision ab96570c (cdmlib): ref #8713 Only add aggregated cat. data if states are present
pplitzner
08:52 AM Revision c8def030 (cdmlib): ref #8450 Only add aggregated quant. data if data present
pplitzner

11/23/2019

09:45 PM Revision 455db50e (cdmlib): ref #8469 fix reuse of reature states filter
Andreas Müller

11/22/2019

10:06 PM Revision ad5bae70 (cdmlib): cleanup
Andreas Müller
10:06 PM Revision ad8460be (cdmlib): ref #8679 preliminary fix failing test for rank aggregation with abse...
Andreas Müller
09:18 PM Revision f6fda820 (cdmlib): ref #8679 remove old COMPUTE marker and move ignore lists to configur...
Andreas Müller
01:27 PM bug #8718: polytomousKey page: better handling of invalid uuids
Patrick, this is relevant for additivit (currently PKs get a new uuid with every generation) so we may think about mo... Andreas Müller
12:53 PM bug #8718 (New): polytomousKey page: better handling of invalid uuids
ich habe gerade gesehen, dass ein PolyKey, wenn dessen uuid nicht stimmt unschöne Fehler schmeißt:
http://test.e-t...
Andreas Kohlbecker
10:43 AM Revision 1b7e1801 (cdm-dataportal): ref #8595 Fix moved method invocation
Patrick Plitzner
10:41 AM Revision eb89b236 (cdm-dataportal): ref #8595 Fix feature table when no data available
Patrick Plitzner
10:38 AM Revision 5ac909c0 (cdm-dataportal): ref #8595 Only show available datasets label when data available
Patrick Plitzner

11/21/2019

12:12 AM Revision 8e29c4cc (cdmlib): ref #8469 introduce KeyTaxon to allow multiple data and multiple desc...
Andreas Müller
05:19 PM Revision 9b434f6a (cdm-dataportal): ref #8657 moving description methods to description.inc
Andreas Kohlbecker
05:13 PM Revision ab025781 (cdm-dataportal): ref #8686 removing linebreaks from description labels and sim...
Andreas Kohlbecker
04:16 PM task #8716 (Resolved): Configure taxeditor to run with GTK2 in linux
please report if you are having any problems due to the switch to GTK2 Andreas Kohlbecker
04:09 PM task #8716: Configure taxeditor to run with GTK2 in linux
Andreas Kohlbecker wrote:
> as documented in https://wiki.eclipse.org/SWT/Devel/Gtk/GtkVersion the gtk version can b...
Andreas Kohlbecker
04:03 PM task #8716 (In Progress): Configure taxeditor to run with GTK2 in linux
as documented in https://wiki.eclipse.org/SWT/Devel/Gtk/GtkVersion the gtk version can be set via
~~~
--launcher...
Andreas Kohlbecker
01:12 PM task #8716 (Resolved): Configure taxeditor to run with GTK2 in linux
Der Taxeditor verwendet SWT in der Version 3.105.3.v20170228-0512 (Id: org.eclipse.swt, Version: 3.105.3.v20170228-05... Andreas Kohlbecker
04:15 PM Revision 2279c433 (taxeditor): ref #8716 setting GTK to version 2 in the product launcher configu...
Andreas Kohlbecker
04:13 PM Revision c7e854d5 (cdm-dataportal): ref #8595 Only show feature table when data available
Patrick Plitzner
03:58 PM bug #8717 (New): Improve display of PolytomousKey nodes which have a feature
If a PKN has a feature and not a statement it is repeated multiple times for the child alternatives. A better layout ... Andreas Müller
03:58 PM Revision 9078b9c6 (cdm-dataportal): ref #8686 fixing refactoring bug
Andreas Kohlbecker
03:29 PM bug #8313 (Feedback): Multiple categorical data get deleted when clicked on in Character Matrix
Reopen as it happens again.
How to reproduce: in any categorical cell select 2 states. Leafe the cell (it shows bo...
Andreas Müller
03:21 PM feature request #8714 (Resolved): Handle multiple datasets for portal description detail page
Applied in changeset commit:cdm-dataportal|cf89f7e20f7cbd623d7d373bbf9061003f175179. Patrick Plitzner
11:42 AM feature request #8714 (Resolved): Handle multiple datasets for portal description detail page
A description can have multiple descriptive data sets. These define which features are displayed ans in which order.
...
Patrick Plitzner
03:21 PM Revision cf89f7e2 (cdm-dataportal): fix #8714 Show list of available datasets when description ha...
Patrick Plitzner
02:59 PM Revision 185dfa24 (cdmlib): ref #8469 fix multiple dependencies for 1 parent feature issue
Andreas Müller
02:57 PM Revision 92a7f32b (cdmlib): cleanup
Andreas Müller
02:38 PM feature request #8595 (Resolved): Create description detail page
Patrick Plitzner
02:33 PM Revision 16515bdf (cdm-dataportal): ref #8595 Add creation date for cloned source descriptions
Patrick Plitzner
02:32 PM Revision 9705e44e (cdm-dataportal): ref #8657 Avoid null in URL
Patrick Plitzner
02:07 PM Revision 424a2bee (cdmlib): ref #8469 use FeatureState in PolytomousKeyGenerator
Andreas Müller
02:00 PM Revision 1e16407a (cdm-dataportal): ref #8657 Use link icon for descriptions, taxa and specimens
Patrick Plitzner
01:47 PM Revision 875d5c3b (cdm-dataportal): ref #8657 Add taxon information to description detail page
Patrick Plitzner
01:23 PM Revision 7e99b1ac (cdm-dataportal): ref #8657 Remove $linkText parameter
Patrick Plitzner
01:19 PM Revision ea0ae3c7 (cdm-dataportal): ref #8657 Add descriptive data set information to description...
Patrick Plitzner
12:53 PM Revision fe3a5674 (cdm-dataportal): ref #8686 showing CdmLink sources - initial implementation, n...
Andreas Kohlbecker
12:35 PM task #8468 (In Progress): Remove old InapplicableIf tables
Andreas Müller
12:21 PM feature request #8715: Make 'delete Taxonnode' a lonrunning task
Deleting nodes can take some time and results in connection warnings or timeouts. This can be solved by running the d... Katja Luther
12:16 PM feature request #8715 (New): Make 'delete Taxonnode' a lonrunning task
Katja Luther
11:49 AM Revision 51133f9a (cdmlib): ref #8469 filter non-character data
Andreas Müller
11:49 AM Revision 3f678339 (cdmlib): cleanup PolytomousKeyGenerator
Andreas Müller
10:46 AM Revision b6f0e806 (cdmlib): ref #8673 extend initstrategy by cdmSource for ref #8686
Andreas Kohlbecker
10:46 AM Revision c0d26dcf (cdmlib): logging of canceled import
Andreas Kohlbecker
10:32 AM Revision 16a4ba6a (cdmlib): minor
Andreas Müller
10:11 AM Revision e0fce64c (cdmlib): ref #8713 add test class for StructuredDescriptionAggregation
Andreas Müller
08:58 AM Revision 6d2d9cf5 (cdmlib): ref #8713 add test class for StructuredDescriptionAggregation
Andreas Müller
08:19 AM feature request #8713 (Resolved): Improve structured descriptive data aggregation
* Tests
* Remove empty categorical data creation
* use base class algorithm from #8679
* TBC
Andreas Müller
02:26 AM Revision e434b808 (cdmlib): ref #8469 better handling of empty or null CategoricalData
Andreas Müller

11/20/2019

11:54 PM Revision 7e2ee71e (cdmlib): cleanup
Andreas Müller
11:54 PM Revision b73be607 (cdmlib): Some more monitoring during StructuredDescriptionAggregation
Andreas Müller
05:11 PM EDIT Platform Etablierung task #8689: Export Flora of Greece Bupleurum using Cdm2Cdm export
I change Project and milestone as it is mostly data related. Andreas Müller
03:37 PM EDIT Platform Etablierung task #8689 (Closed): Export Flora of Greece Bupleurum using Cdm2Cdm export
The data looks complete and did not cause any errors when opening the taxa in the editor.
I consider this issue as...
Andreas Kohlbecker
05:01 PM feature request #8281 (Closed): Doubtful flag for TaxonNode
E+M data updated
~~~
UPDATE TaxonNode
Set unplaced = 0, doubtful = 1
WHERE unplaced = 1
~~~
also for _AUD
Andreas Müller
05:00 PM feature request #8686 (In Progress): Support CdmLink sources in bibliography
Andreas Kohlbecker
04:59 PM Revision 6527c2f5 (cdm-dataportal): php-doc: return value
Andreas Kohlbecker
04:51 PM EDIT Platform Etablierung task #8711 (Closed): add additivity ontologies to the bupleurum database
completed a dump is stored at edit-test:/root/cdm_test_bupleurum-2019-11-20-001.sql.bz2 Andreas Kohlbecker
01:25 PM EDIT Platform Etablierung task #8711 (Closed): add additivity ontologies to the bupleurum database
the ontology can be downloaded from https://cybertaxonomy.eu/download/data/ontology/additivity/
the characters mus...
Andreas Kohlbecker
04:24 PM feature request #8657 (Resolved): Order description element in portal according to CharacterTree
Patrick Plitzner
02:19 PM Revision c2138217 (taxeditor): german i18n for "Descriptive Data Set"
Patrick Plitzner
02:04 PM Revision e7b6e47a (cdmlib): remove possibility to define aggreaged distributions on description e...
Andreas Müller
02:04 PM Revision 65bc38bc (cdmlib): cleanup
Andreas Müller
02:04 PM Revision b11aa70a (cdmlib): cleanup
Andreas Müller
01:54 PM Revision 8eaf9b31 (cdmlib): abcd import: avoid potential NPE and emtpy authors
Katja Luther
01:32 PM EDIT Platform Etablierung task #8712 (Closed): Kurs "Integrated Taxonomy" : prepare setup for workshop computers

* We will be using the edit-demo-2 server for the Kurs "Integrated Taxonomy"
* prepare database: - **DONE**
...
Andreas Kohlbecker
12:58 PM task #8710: Decide if sub-area Preference and/or status order preference rule
relevant code:
~~~
define('CDM_DISTRIBUTION_FILTER_DEFAULT', serialize(
array(
'filter_rules' => array(
'statu...
Andreas Müller
12:57 PM task #8710: Decide if sub-area Preference and/or status order preference rule
Probably needs discussion with users. Andreas Müller
12:56 PM task #8710 (New): Decide if sub-area Preference and/or status order preference rule
Currently they are switched of in default dataportals.
The setting can be found in the portal settings on the genera...
Andreas Müller
12:47 PM Revision d3ac3ea7 (cdmlib): ref #8657 Extend property path for description init strategy
Patrick Plitzner
12:41 PM Revision b6fb9923 (cdmlib): Revert "ref #8657 Add (remote) service for ordered description elemen...
This reverts commit 7af2c90016dd6215526a732c2d5d8b281c779d0f. Patrick Plitzner
12:40 PM Revision a38c0718 (cdm-dataportal): ref #8657 Retain hierarchy information of description elements
- remove web service for flat ordered list Patrick Plitzner
12:10 PM feature request #8709 (New): Show last selected name in selection dialog of name in source
mail Eckhard v. Raab-Straube:
was auch nett wäre: wenn sich der Editor bei der Auswahl des „name in source“ an die...
Katja Luther
12:05 PM feature request #8708 (New): Sort taxa in distribution editor same as in navigator
mail Eckhard v. Raab-Straube:
Hallo,
zum Verbreitungseditor:
wenn man den Verbreitungseditor von einem höher...
Katja Luther
12:03 PM feature request #8707 (New): Use NAT Table for specimen search result
The search result for the specimen search contains not all informations needed. Therefore it should be shown in a NAT... Katja Luther
11:45 AM feature request #8706 (New): taxeditor error report with timestamps
Wie wäre es wenn wir dem Fehlerprotokoll mal einen Timestamp spendierten? Damit wäre es leichter den Fehler einem bes... Andreas Kohlbecker
01:35 AM bug #8670 (Resolved): Unwanted distribution aggregation/display on 2 levels
Dieses Ticket hat primär mit der Kartenanzeige und nicht mit der Aggregation zu tun. Bei der Kartenanzeige gibt es di... Andreas Müller

11/19/2019

11:12 PM task #8671: Distribution in E+M (BM) on different levels
AM
Die Regel klingt erstmal sinnig und einfach. Ich habe allerdings gerade mal eine DB Abfrage gestartet, wie viel...
Andreas Müller
11:05 PM task #8671: Distribution in E+M (BM) on different levels
ERS:
die Anzeige ist so korrekt. Wenn ein Unterareal vorhanden ist, soll das höhere Areal nicht angezeigt werden, ...
Andreas Müller
05:16 PM task #8671 (In Progress): Distribution in E+M (BM) on different levels
Andreas Müller
05:38 PM bug #6629 (In Progress): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to...
Andreas Müller
05:31 PM feature request #8661 (Closed): "New DataSet" should ask for label and then open the dataset
Works fine Andreas Müller
05:28 PM feature request #8703 (Closed): Move TermSearch and Specimen(Import)Search to editor area of taxe...
Works fine. Thanks. Andreas Müller
02:46 PM feature request #8703 (Resolved): Move TermSearch and Specimen(Import)Search to editor area of ta...
Applied in changeset commit:taxeditor|0b7e08834f03d3e7ce2ea6c1f55c908a14d76758. Patrick Plitzner
02:28 PM feature request #8703 (Closed): Move TermSearch and Specimen(Import)Search to editor area of taxe...
Patrick Plitzner
05:27 PM bug #8705 (New): While specimen are loaded from provider the specimen list in specimen search sho...
to indicate that the search is not yet ready. Andreas Müller
05:25 PM feature request #8665 (Feedback): Rename "New" to "New Tree" in Term Tree editors
The problem in the ticket description is solved. Ticket can be closed.
Something I found when testing:
Can we u...
Andreas Müller
05:19 PM Revision cd10bbf6 (cdmlib): ref #8517 handle protected fieldunit titlecache in DerivedUnitFacadeF...
Andreas Müller
05:18 PM bug #8670 (In Progress): Unwanted distribution aggregation/display on 2 levels
Andreas Müller
05:15 PM task #8672 (In Progress): Source handling during (distribution) aggregation
Andreas Müller
04:59 PM bug #7665: ConcurrentModificationException when closing Editor
I think it happens still from time to time. Andreas Müller
04:57 PM feature request #3836 (Closed): Implement modifiers and modifying text for Description Elements i...
I think I tested this in the context of #8226 and I think it worked. Andreas Müller
04:54 PM EDIT Platform Etablierung task #8704 (In Progress): Test specimen import via BioCase and write documentation
Andreas Kohlbecker
04:52 PM EDIT Platform Etablierung task #8704 (In Progress): Test specimen import via BioCase and write documentation

**TODO:**
* test specimen import via BioCase in taxeditor - **DONE and succesful**
* documentation **in progresss
Andreas Kohlbecker
04:46 PM bug #8517 (Resolved): SpecimenOrObservation: data from protected titleCache missig in portal pages
Sorry, I was not exact in my comment. I meant to move it from DerivedUnitFacadeCacheStrategy to DerivedUnitFacadeFiel... Andreas Müller
04:42 PM Revision 10fda345 (cdmlib): ref #8517 handle protected fieldunit titlecache in DerivedUnitFacadeF...
Andreas Müller
04:42 PM Revision d0eb3b5b (cdmlib): cleanup
Andreas Müller
04:18 PM EDIT Platform Etablierung report #8556 (Closed): sifting of existing documentation
Andreas Kohlbecker
04:16 PM EDIT Platform Etablierung task #8578 (Closed): Discuss and find appropriate terms for major editor parts (window, view, edi...
This task in complete since we have now a good naming strategy which should be acceptable for almost anybody:
"....
Andreas Kohlbecker
04:08 PM bug #8243: Cdm Cache uses a lot of disk space
The description states that the increase of diskspace usage happened in seconds "*free disk space to 100% full in sec... Andreas Kohlbecker
03:59 PM bug #8702: Remove Not null constraint for uuid in AUD tables
query in information_schema to find such columns
~~~
SELECT *
FROM COLUMNS c
WHERE c.COLUMN_NAME = 'uuid' AND ...
Andreas Müller
03:21 PM bug #8702: Remove Not null constraint for uuid in AUD tables
I updated most production DBs manually already. Andreas Müller
01:47 PM bug #8702 (Closed): Remove Not null constraint for uuid in AUD tables
Some databases do have uuid NOT NULL contraints in some _AUD tables. In caryo_spp I found the following tables with t... Andreas Müller
03:24 PM feature request #8694 (Closed): Specimen online import - Specimen Search: import button layout pr...
perfectly solved! Andreas Kohlbecker
02:42 PM feature request #8694 (Resolved): Specimen online import - Specimen Search: import button layout ...
Andreas Müller
02:46 PM Revision 0b7e0883 (taxeditor): fix #8703 Open term search and specimen (import) search to editor ...
Patrick Plitzner
02:13 PM Revision 56036a0c (taxeditor): ref #8694: layout issues in specimen import view
Katja Luther
01:54 PM bug #7683: external links Audit table should allow uuid to be null
We need an update script for all cases where AUD tables still have uuid NOT NULL: #8702 Andreas Müller
12:40 PM bug #8621: Do not save empty sources
the same should be implemented for identifiers and others Katja Luther
12:32 PM bug #8701 (New): Toggle button in GBIF Specimen import does not toggle but is select all/none
Toggle usually inverts the current selection. But the toggle button in the specimen import does either select all or ... Andreas Müller
12:07 PM feature request #8700: Geofilter for DescriptiveDataSets should be used for taxon nodes AND speci...
This needs to be configurable.
One issue to solve is that specimen data often use other area vocabularies then ta...
Andreas Müller
11:27 AM feature request #8700 (New): Geofilter for DescriptiveDataSets should be used for taxon nodes AND...
Currently only the taxon nodes are filtered with a TaxonNodeFilter Patrick Plitzner
11:08 AM bug #8699 (New): Add menu item to accepted name to set as basionym
mail Eckhard von Raab-Struabe:
wie kann man eigentlich im Freitext-Editor den akzeptierten Namen als Basionym der ...
Katja Luther
11:02 AM Revision ad8c4e9b (cdmlib): add ORCID iD as IdentifierType
Katja Luther
10:30 AM feature request #8698: Sort order in status drop down of distribution editor
Es sollte auf jeden Fall neben einer alphabetischen Sortierung auch eine geben, die sich an der Sortierung im Vokabul... Andreas Müller
09:56 AM feature request #8698 (New): Sort order in status drop down of distribution editor
Mail Eckhard von Raab-Straube:
Hallo,
eine weitere Sache:
kann ich die Reihenfolge der Statusangaben im Drop...
Katja Luther
01:11 AM Revision 973bd95e (cdmlib-apps): ref #8689 some updates to BupleurumExportActivator
Andreas Müller
01:10 AM Revision daf61d74 (cdmlib): ref #8689 fix issus in Cdm2Cdm import and add "removeImportSource" co...
Andreas Müller
01:09 AM EDIT Platform Etablierung task #8689 (Resolved): Export Flora of Greece Bupleurum using Cdm2Cdm export
This should be ready. Database is stored at cdm_test_bupleurum on edit-test. Please review. Andreas Müller

11/18/2019

12:33 AM Revision cb3810d6 (cdmlib-apps): ref #8689 some updates to BupleurumExportActivator
Andreas Müller
10:07 PM bug #8696 (New): ehcahe discstore conflict when using the taxeditor with multiple users on the sa...
The diskstore must be created in user specific subfolders of the system temp folder.
We should consider creating a...
Andreas Kohlbecker
06:33 PM feature request #8695 (New): Specimen online import - provider selection should remember last choise
During the specimen online import the choice made in the provider selection always is reset to GBIF.
If the custom p...
Andreas Kohlbecker
05:39 PM feature request #8694 (Closed): Specimen online import - Specimen Search: import button layout pr...
The import button seems to have a negative offset:
![](picture967-1.png)
Andreas Kohlbecker
05:36 PM feature request #8693 (New): Specimen online import - Specimen Search: show number of result items
The count of specimens which are found by BioCase search should be shown in the Specimen Search View. Andreas Kohlbecker
05:33 PM bug #8692 (New): Specimen online import is slow
Importing ~200 Specimens via Import > Specimen > Specimen online took more than one hour for about 200 specimens
*...
Andreas Kohlbecker
04:29 PM bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
Ok, this makes it much clearer. I will have a look if this can be implemented somehow. Andreas Müller
03:50 PM bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
This configurator is used in a lot of places: specimen tree editor, specimen facet search (experimental), TaxonServic... Patrick Plitzner
03:08 PM bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
Can you give some more information about context (specimen tree, matrix, dataportal, ...?) and other information requ... Andreas Müller
04:02 PM bug #6036: Problems with deleting type names
Is this still an open issue? Andreas Müller
04:00 PM bug #6182: Emptying protolog URI does not work
Protologues soon will be handled as OriginalSourceBase.externalLink, so not so important to fix Andreas Müller
03:58 PM bug #6585: Combo menu items have orange font
Is this still an open issue? Please also check on linux. Andreas Müller
03:56 PM feature request #6760: specimen import configuration
Is this still an open issue/duplicate/related to other tickets? Andreas Müller
03:53 PM Revision eba2d1f7 (cdmlib): typo
Patrick Plitzner
03:35 PM feature request #6676: A user with READ access to taxa but WRITE access to factual data cannot up...
I think this is something you are working on anyway. Andreas Müller
03:33 PM feature request #6866: Improve specimen page
Can you please relate this ticket with other tickets on this issue (specimen page)? Andreas Müller
03:01 PM bug #6545 (Closed): [MASTER] Eclipse 4 bugs
Andreas Müller
02:52 PM bug #7512: Saving in Specimen Tree View creates unwanted scrolling on windows
Can you please test if you can reproduce? Andreas Müller
02:39 PM bug #8129 (Closed): Load images asynchronously in media details view
Andreas Müller
02:38 PM bug #8129: Load images asynchronously in media details view
There is a follow up ticket #8691 Andreas Müller
02:36 PM bug #8691 (New): Remaining issues for asynchronous image loading
see #8129 for open issues Andreas Müller
02:33 PM bug #7911 (Worksforme): Changing areas in Distribution Editor yields to wrong column labels
Is probably fixed. Andreas Müller
02:31 PM bug #7686 (Resolved): Specimen title cache issues in data portal specimen table
Please check what is still open Andreas Müller
01:55 PM feature request #4511 (Rejected): Remove white space below EntitySelectionElement
Andreas Müller
01:39 PM feature request #4484: Evaluate publish flag for derivates in data portal
There is probably a duplicate somewhere. Ticket has some importance for GBOL specimen. Andreas Müller
12:41 PM Revision 29b21170 (cdmlib): add orcid and doi to identifier table
Katja Luther
10:40 AM feature request #8690 (New): DistributionTreeDTO and TreeNodeDTO implemented for description/dist...
The responses of the `/portal/description/distributionInfoFor/{uuid}` web-service can get quite huge for aggregated d... Andreas Kohlbecker
09:39 AM Revision f574c105 (cdmlib): revert some of the last changes
Katja Luther
09:28 AM Revision 38969108 (cdmlib-apps): ref #8651 adapt EuroMedActivator to changes in DistributionAggre...
Andreas Müller
09:27 AM Revision c49b3877 (cdmlib-apps): ref #8689 move Cdm2Cdm migration classes from cdm-pesi to cdmlib...
Andreas Müller
09:19 AM Revision 25516d86 (cdmlib): ref #8689 revert unwanted commited files
Andreas Müller
09:18 AM Revision 77281e25 (cdmlib): ref #8689 Cdm2Cdm import from app-import to cdmlib-io
Andreas Müller
09:18 AM EDIT Platform Etablierung task #8689 (Closed): Export Flora of Greece Bupleurum using Cdm2Cdm export
Andreas Müller
09:16 AM Revision b37495b9 (cdmlib): ref #8679 move DistributionAggregation functionality to base class
Andreas Müller
09:14 AM Revision 9c0a55dd (cdmlib): cleanup
Andreas Müller

11/17/2019

12:03 AM feature request #8472: Transmission engine for distribution aggregation needs to be adapted to ne...
Close only if run on cichorieae (and others?) and the tmp code removing existing "Computed" markers is not needed any... Andreas Müller
12:02 AM feature request #8472 (Resolved): Transmission engine for distribution aggregation needs to be ad...
Should be fixed now. Andreas Müller

11/16/2019

12:30 PM Revision c5fa3edd (cdm-dataportal): ref #8657 Add webservice call to cdm_api.module
Patrick Plitzner

11/15/2019

12:32 AM Revision 2acab840 (cdmlib): ref #8679 improve monitoring
Andreas Müller
12:05 AM Revision a8496b29 (cdmlib): ref #8679 improve tests
Andreas Müller
10:49 PM Revision 7800d0d0 (cdmlib): ref #8679 generic source handling with SourceModes
Andreas Müller
10:46 PM feature request #8688: Make OriginalSourceBase.cdmSource visible in TaxEditor
Please decide who could be assignee. It would be nice to have it soon. Andreas Müller
10:46 PM feature request #8688 (New): Make OriginalSourceBase.cdmSource visible in TaxEditor
The field OriginalSourceBase.cdmSource is usually filled during aggregations (for now). Therefore it does not need to... Andreas Müller
10:26 PM bug #8687 (New): Description page must show all DescriptionElement subclasses
Currently it seems to show only Categorical and Quantitative Data. But one never nows what data will really come with... Andreas Müller
10:14 PM feature request #8686 (In Progress): Support CdmLink sources in bibliography
OriginalSourceBase has the new attribute cdmSource. In original source this can exist instead of citation. Currently ... Andreas Müller
07:01 PM Revision c8424393 (cdmlib): cleanup
Andreas Müller
07:01 PM Revision 008371ae (cdmlib): ref #8679 move AggregationMode to ConfiguratorBase
Andreas Müller
06:07 PM Revision 7af2c900 (cdmlib): ref #8657 Add (remote) service for ordered description elements by tree
Patrick Plitzner
03:49 PM task #8679 (In Progress): Further unify description aggregation methods
Andreas Müller
03:30 PM feature request #8677: Add distribution aggregation to set subtree menu
I updated the above list Andreas Müller
03:09 PM feature request #8677: Add distribution aggregation to set subtree menu
Katja Luther wrote:
> In #6352 the mentioned configuration is:
>
> * lowerRank - default: UnknownRank = 5c4d6755...
Andreas Müller
02:31 PM feature request #8677: Add distribution aggregation to set subtree menu
In #6352 the mentioned configuration is:
* lowerRank - default: UnknownRank = 5c4d6755-2cf6-44ca-9220-cccf8881700...
Katja Luther
03:00 PM Revision 4ced804f (cdmlib): Allow wild cards in term facet search
Patrick Plitzner
02:59 PM Revision c7dfbd8b (taxeditor): Do not search with empty search string in facet search
Patrick Plitzner
01:43 PM bug #8517: SpecimenOrObservation: data from protected titleCache missig in portal pages
Andreas Müller wrote:
> This seems to work but handling the protected title cache of the **field** unit in the **der...
Andreas Kohlbecker
01:31 PM bug #8681 (In Progress): Fix sect. parsing
Andreas Müller
01:04 PM Revision 9235bde5 (cdmlib): ref #8679 fix rerun DistributionAggregation with changed sources and ...
Andreas Müller
01:01 PM task #8651 (Closed): Unify description aggregation methods (distribution and structured descripti...
Andreas Müller
01:01 PM task #8651: Unify description aggregation methods (distribution and structured descriptive data)
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> > AK and PP as you have developed the orginal classes maybe...
Andreas Müller
12:55 PM bug #8570 (Closed): PolytomousKeyNode.otherNode missing in REST service response
Works as expected. Andreas Müller
12:43 PM bug #8622 (Closed): Missing specimen Identifier leads to empty brackets in portal
I tested the above mentioned pages and they look fine. Andreas Müller
12:10 PM bug #8685 (Closed): Exception when calling DwC-A Export
Katja Luther
12:09 PM bug #8685 (Closed): Exception when calling DwC-A Export
mail:
Dear Andreas,
I enclose the error message I get from EDIT when I try to export the data in DwC-A format.
...
Katja Luther
10:55 AM Revision ed98102a (cdmlib-apps): ref #8651 adapt EuroMedActivator to changes in DistributionAggre...
Andreas Müller
10:54 AM Revision 83146769 (cdmlib-apps): ref #8684 fixing compile errors in cdm-pesi
Andreas Müller
10:49 AM Revision fd9dc38f (cdmlib): cleanup and minor
Andreas Müller
10:49 AM Revision 18d9b6eb (cdmlib): ref #8684 fixing compile errors in cdmlib-persistence
Andreas Müller
10:48 AM Revision 7d451c51 (cdmlib): fix potential NPEs in ABCD import
Katja Luther
10:21 AM bug #8684 (Resolved): ITaxonService.findTaxaByName misses initStrategy Parameter
Applied in changeset commit:cdmlib|36a4a34fab6ca46f2d4b5c3707d55c2e2078e442. Andreas Kohlbecker
10:21 AM task #8683 (Resolved): TaxonDaoHibernateImpl.countTaxaByName rename parameter authorship authors...
Applied in changeset commit:cdmlib|ca3e66ff9cd00985c5175e8a38ba8eab64063a13. Andreas Kohlbecker
10:21 AM Revision 36a4a34f (cdmlib): fix #8684 adding initStratery to ITaxonService.findTaxaByName
Andreas Kohlbecker
09:57 AM Revision ca3e66ff (cdmlib): fix #8683 TaxonDaoHibernateImpl.countTaxaByName rename parameter auth...
Andreas Kohlbecker
09:49 AM Revision c4fb8d80 (cdmlib): fixing scary string compare bug
Andreas Kohlbecker
09:34 AM Revision e23faa0a (taxeditor): Remove experimental status for additivity related UI parts
Patrick Plitzner
09:28 AM Revision 3a88b57a (taxeditor): ref #8656 i18n for loading label
Patrick Plitzner
09:26 AM Revision 390ef5ac (taxeditor): ref #8656 Update label if matrix loadiung failed
Patrick Plitzner
09:06 AM feature request #8661 (Resolved): "New DataSet" should ask for label and then open the dataset
Applied in changeset commit:taxeditor|a61d053e67fceb35c6cfb0065d08651c09b002e6. Patrick Plitzner
09:05 AM Revision a61d053e (taxeditor): fix #8661 "New DataSet" should ask for label and then open the dat...
Patrick Plitzner
08:29 AM feature request #8665 (Resolved): Rename "New" to "New Tree" in Term Tree editors
Applied in changeset commit:taxeditor|c127cb13020855f630fc93b36842e45d063997e0. Patrick Plitzner
08:29 AM Revision c127cb13 (taxeditor): fix #8665 Rename menu item label
Patrick Plitzner

11/14/2019

05:16 PM task #8651: Unify description aggregation methods (distribution and structured descriptive data)
Andreas Müller wrote:
> AK and PP as you have developed the orginal classes maybe you want to have a look to the n...
Andreas Kohlbecker
04:59 PM feature request #8673 (Closed): Allow OriginalSource to link to other CDM objects
works as expected Patrick Plitzner
04:57 PM Revision 524c5307 (taxeditor): Show DescriptionType message instead of toString()
Patrick Plitzner
04:52 PM bug #8676 (Closed): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
Andreas Kohlbecker
04:49 PM bug #8684 (Resolved): ITaxonService.findTaxaByName misses initStrategy Parameter
ITaxonService.findTaxaByName misses initStrategy Parameter causing unsolvable LIEs when using via the portal service
...
Andreas Kohlbecker
04:46 PM task #8683 (Resolved): TaxonDaoHibernateImpl.countTaxaByName rename parameter authorship authors...
Andreas Kohlbecker
04:42 PM bug #5048 (Closed): cdm-server causes unusual high native memory consumption for jvm
last remaining subtask copied to #8682. ticket can now be closed. Andreas Kohlbecker
04:40 PM bug #8682 (New): cdm-server debian packages configured for jemalloc
in order to save native memory it is highly recommended to run the cdm-server with `jemalloc` instead of the system ... Andreas Kohlbecker
04:32 PM task #8674 (Closed): configure cdm-server docker image to run with jemalloc
everything ok! Andreas Kohlbecker
03:49 PM Revision 3411af18 (cdm-server): Merge branch 'release/5.11.0' into develop
jenkins
03:48 PM Revision 38d0d183 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
03:48 PM Revision 57b234aa (cdm-server): updating poms for branch'release/5.11.0' with non-snapshot versions
jenkins
03:47 PM Revision f90eb6c2 (cdm-webapp): Merge branch 'release/5.11.0' into develop
jenkins
03:47 PM Revision 11deb93a (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
03:47 PM Revision 66a333e4 (cdm-webapp): updating poms for branch'release/5.11.0' with non-snapshot versions
jenkins
03:47 PM Revision ffbc80d4 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.11.0
jenkins
03:47 PM Revision cf634b20 (cdm-dataportal): Merge branch 'release/5.11.0' into develop
jenkins
03:46 PM Revision c0b05cbc (cdm-dataportal): updating poms for branch'release/5.11.0' with non-snapshot ve...
jenkins
03:46 PM Revision cb5a98c5 (cdm-dataportal): release-preparation: production level css
jenkins
03:46 PM Revision 56b76499 (taxeditor): Merge branch 'release/5.11.0' into develop
jenkins
03:46 PM Revision 62c5bf9d (taxeditor): Merge branch 'release/5.11.0'
jenkins
03:45 PM Revision e5e80f40 (cdm-vaadin): Merge branch 'release/5.11.0' into develop
jenkins
03:45 PM Revision f302dddc (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:41 PM Revision 7649bbba (cdm-vaadin): updating poms for branch'release/5.11.0' with non-snapshot versions
jenkins
03:41 PM Revision 0ba1a84a (cdm-vaadin): jenkins bumping cdmlib.version to 5.11.0
jenkins
03:40 PM Revision 0fb9a6f8 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:40 PM Revision 7488b0d6 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:40 PM Revision 34fc89c8 (cdmlib): Merge branch 'master' into develop
jenkins
03:40 PM Revision 458c738d (cdmlib): Merge branch 'release/5.11.0'
jenkins
03:23 PM Revision af102b7d (cdmlib): updating poms for branch'release/5.11.0' with non-snapshot versions
jenkins
02:34 PM bug #8681 (In Progress): Fix sect. parsing
See open issue in #8253 . Maybe it is a more general problem.
"this is in Rank.java and the map idInVocMap is fil...
Andreas Müller
02:32 PM feature request #8253 (Closed): Authors for genus autonyms
I found the place. And probably fixed it but will not commit before release as it needs to be further tested.
Crea...
Andreas Müller
02:19 PM feature request #8253: Authors for genus autonyms
Andreas Müller wrote:
> Can you give some more information where to find these things? Especially "map of the idInV...
Katja Luther
02:14 PM feature request #8253: Authors for genus autonyms
Can you give some more information where to find these things? Especially "map of the idInVocMap " Andreas Müller
02:06 PM feature request #8253 (Feedback): Authors for genus autonyms
Katja Luther
01:40 PM feature request #8253: Authors for genus autonyms
I found the cause of the parsing problem:
when searching for the rank by Rank.getRankByIdInVoc(infraGenRankMarker)...
Katja Luther
02:26 PM Revision dd0fb528 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.11.0-S...
jenkins
02:26 PM Revision c4b15330 (cdm-webapp): updating poms for 5.12.0-SNAPSHOT development
jenkins
02:26 PM Revision 281fde70 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.12.0-S...
jenkins
02:25 PM Revision 451335ef (taxeditor): Updated version in pom / project files to taxeditor version : 5.12...
jenkins
02:25 PM Revision fde64bdb (taxeditor): Updated version in pom / project files to taxeditor version : 5.11...
jenkins
02:23 PM Revision e2ef05a4 (cdm-server): updating poms for 5.12.0-SNAPSHOT development
jenkins
02:23 PM Revision b48c4700 (cdm-vaadin): jenkins bumping cdmlib.version to 5.11.0-SNAPSHOT
jenkins
02:23 PM Revision a12486b5 (cdm-dataportal): updating poms for 5.12.0-SNAPSHOT development
jenkins
02:23 PM Revision fd8f8d26 (cdm-vaadin): updating poms for 5.12.0-SNAPSHOT development
jenkins
02:23 PM Revision 3f458b2b (cdm-vaadin): updating poms for 5.11.0 branch with snapshot versions
jenkins
02:23 PM Revision 82fd6211 (cdm-vaadin): jenkins bumping cdmlib.version to 5.12.0-SNAPSHOT
jenkins
02:21 PM Revision b0cbc440 (cdmlib): updating poms for 5.12.0-SNAPSHOT development
jenkins
02:00 PM Revision f31fdd6b (cdm-dataportal): ref #8673 Fix description title display on taxon page
Patrick Plitzner
01:15 PM bug #8631 (Closed): ABCD import fails to put new taxa into the classification, create mediaspecim...
Katja Luther
01:00 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
It looks ok in KDE!
The ticket can be closed.
Andreas Kohlbecker
12:25 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
Andreas Müller wrote:
> It look ok now. Only change I suggest: let the "Biocase provider for DNA" dropdown start at ...
Andreas Müller
09:55 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
It look ok now. Only change I suggest: let the "Biocase provider for DNA" dropdown start at the same horizontal posit... Andreas Müller
01:00 PM feature request #8667 (Closed): Make Person.orcid editable in TaxEditor
Andreas Müller
12:56 PM feature request #8667 (Resolved): Make Person.orcid editable in TaxEditor
this is fixed Katja Luther
12:54 PM Revision 64090e78 (cdmlib): cleanup
Andreas Müller
12:16 PM Revision 4c0d4268 (cdmlib): cleanup
Andreas Müller
12:15 PM Revision 9449fa3d (cdmlib): ref #8651 useClearExistingDistribution = false as default
Andreas Müller
11:56 AM Revision 91006ade (cdmlib): ref #8651 cleanup DistributionAggregation and remove old computed mar...
Andreas Müller
11:54 AM Revision 18683dc6 (taxeditor): ref #8631: layout issues
Katja Luther
11:37 AM Revision f6a63f8b (cdmlib): ref #8673 CdmLinkSourceBeanProsessor disabled and init strategy for c...
Andreas Kohlbecker
10:57 AM Revision dcc025b4 (taxeditor): use preferencePredicate.EditMapServiceAccessPoint in featureDistri...
Katja Luther
10:38 AM Revision 2f1bb433 (taxeditor): cleanup
Andreas Müller
10:07 AM Revision e6287d4a (cdmlib): avoid NPE in dataholder
Katja Luther
09:59 AM Revision d6dc2032 (cdmlib): smaller issues in abcd import
Katja Luther
09:55 AM Revision 5e751d05 (cdmlib): minor
Katja Luther
09:51 AM Revision b0e71e93 (taxeditor): avoid exception when export config does not have userfriendlyIOName
Katja Luther
09:47 AM Revision 44434863 (cdmlib): add userFriendlyIOName to Dwca Configurator
Katja Luther
07:54 AM Revision 4e506608 (cdm-dataportal): ref #8673 Fix description title display on taxon page
Patrick Plitzner
07:46 AM Revision 79e61daa (cdm-dataportal): ref #8673 Adapt more specific description type
Patrick Plitzner

11/13/2019

12:11 AM Revision c1ede4f8 (cdmlib): ref #8651 implement reuse of distributions in DistributionAggregation
Andreas Müller
10:50 PM Revision 85884141 (cdmlib): ref #8651 further cleanup DistributionAggregation
Andreas Müller
09:55 PM Revision 27dd2015 (cdmlib): fix compile error
Andreas Müller
09:48 PM Revision 0cfec87b (cdmlib): ref #8651 further cleanup DistributionAggregation
Andreas Müller
09:47 PM Revision bd522a58 (cdmlib): cleanup
Andreas Müller
05:26 PM Revision ec44caf9 (cdmlib): ref #8651 cleanup DistributionAggregation
Andreas Müller
05:23 PM Revision 7926167f (cdmlib): cleanup
Andreas Müller
05:21 PM Revision 778d2800 (cdmlib): cleanup ProgressMonitor
Andreas Müller
05:16 PM Revision 2412e7b6 (cdmlib): ref #8673 CdmLinkSourceBeanProsessor proper null handling
Andreas Kohlbecker
05:12 PM Revision f5c38c85 (taxeditor): fix possible NPE
Patrick Plitzner
05:06 PM Revision 3fa32caf (taxeditor): ref #8651 Adapt to finer grained aggregation description type
Patrick Plitzner
04:31 PM Revision 628c6976 (cdmlib): ref #8673 CdmLinkSourceBeanProsessor to serialize CdmLinkSource as Ty...
Andreas Kohlbecker
03:20 PM feature request #8673: Allow OriginalSource to link to other CDM objects
CdmLinkSourceBeanProsessor implemented but cannot test since i can't find data with CdmLinkSource
@Patrick: please...
Andreas Kohlbecker
12:50 PM feature request #8673: Allow OriginalSource to link to other CDM objects
We still need to check if the empty constructor of CdmLinkSource also could be protected. Patrick could you do this? Andreas Müller
03:19 PM Revision 019036d1 (cdmlib): ref #8673 CdmLinkSourceBeanProsessor to serialize CdmLinkSource as Ty...
Andreas Kohlbecker
03:07 PM Revision a7df73f0 (cdmlib): ref #8651 cast failing in LINUX
Andreas Müller
02:59 PM Revision 2a00d0b3 (cdmlib): cleanup
Andreas Müller
02:59 PM Revision f24fb983 (cdmlib): ref #8651 fix missing uuid
Andreas Müller
02:50 PM Revision a914faf1 (cdmlib): ref #8651 Introduce new description type "Aggregated Structured Descr...
Andreas Müller
02:48 PM Revision 8a7e4037 (cdmlib): cleanup
Andreas Müller
02:37 PM feature request #8680 (New): Unify long running tasks framework
Long running task are currently implemented at many places and for multiple purposes.
Some things we could do:
...
Andreas Müller
02:14 PM Revision 8e1870d6 (cdmlib): cleanup
Andreas Müller
02:09 PM task #8651: Unify description aggregation methods (distribution and structured descriptive data)
Andreas Müller wrote:
>
> Before closing we should delete the redundant methods from DescriptiveDataSetService. ...
Patrick Plitzner
01:06 PM task #8651 (Resolved): Unify description aggregation methods (distribution and structured descrip...
We do now have a common base class and also the LongRunningTaskService used only 1 method (with config as parameter).... Andreas Müller
01:48 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
I made some changes myself. Looks fine on Linux. Please test on windows. Patrick Plitzner
12:35 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
@Patrick could you have another look, whether it looks better now. It is difficult to check for me because with windo... Katja Luther
01:47 PM Revision d36d2eb8 (taxeditor): ref #8631 Fixed layout + merged constructors
Patrick Plitzner
01:27 PM Revision c68519c0 (cdmlib): ref #8651 Remove aggregation methods(now in DescriptionAggregationBase)
Patrick Plitzner
01:03 PM feature request #8253: Authors for genus autonyms
Katja Luther wrote:
> Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes...
Katja Luther
01:01 PM task #8679 (In Progress): Further unify description aggregation methods
Common base classes already exist. Further work might be:
* ~~use the same calls for "aggregateWithinTaxon", "aggr...
Andreas Müller
12:59 PM feature request #8470 (Closed): Handle username constraints in user and group editing
Seems to work as expected Andreas Müller
12:53 PM feature request #7019 (Closed): sort import menu
Works as expected. Andreas Müller
09:14 AM feature request #7019 (Resolved): sort import menu
Patrick Plitzner
12:27 PM task #8678 (New): Update Fauna Europaea Master Db for common names with area = North America and ...
Some common names had "English-United States" as language and where imported with language = English and Area = North... Katja Luther
12:22 PM Revision 67ab92f3 (cdm-dataportal): ref #8673 Adapt portal to CdmSource eager loading
Patrick Plitzner
11:32 AM Revision f4c1a988 (cdmlib): add default priority to distribution aggregation webservice
Andreas Müller
11:32 AM Revision d1292203 (cdmlib): ref #8651 always add description type to aggregated descriptions
Andreas Müller
11:32 AM Revision 7841cf62 (cdmlib): cleanup
Andreas Müller
11:17 AM Revision 453261d0 (cdmlib): ref #8673 Extend property path for CdmSources
Patrick Plitzner
11:15 AM Revision 1e2fd81a (cdmlib): ref #8673 make cdmSource Eager to avoid LIEs
Andreas Müller
10:42 AM Revision 065e965b (cdm-dataportal): ref #8673 Adapt portal to CdmSource for aggregation clones
Patrick Plitzner
10:30 AM Revision c32e83c4 (cdmlib): ref #8673 Extend property path for CdmSources
Patrick Plitzner
08:37 AM feature request #6337 (Rejected): simple web ui to trigger the transmission engine distribution
I also agree Andreas Kohlbecker
08:36 AM feature request #6337: simple web ui to trigger the transmission engine distribution
Norbert wrote:
I agree that TaxEditor is the preferred place to run aggregation, see no need for an implementation...
Andreas Kohlbecker
08:35 AM Revision 4eedd13b (taxeditor): ref #8651 Adapt to cdmlib aggregation configuration
Patrick Plitzner

11/12/2019

11:46 PM Revision 67146e56 (cdmlib): cleanup
Andreas Müller
11:46 PM Revision 58ea183c (cdmlib): ref #8651 smaller changes to distribution accumulation webservice
Andreas Müller
11:32 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
Shouldn't we rename the parameter to authorshipCache in the service layer methods. Because that is what it is. Andreas Müller
09:05 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
no worries, it was fixed already when I created the ticket. I only had no time to commit and push. Andreas Kohlbecker
09:03 PM bug #8676 (Resolved): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
Applied in changeset commit:cdmlib|83c72818d2e637f56f3e956c99cb0e6c1e508cbd. Andreas Kohlbecker
06:10 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
Why is this in 5.11. Please fix immediately if you want to keep it here. Otherwise move. Andreas Müller
05:37 PM bug #8676 (Closed): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
The find method corresponding to `countTaxaByName(Class <? extends TaxonBase> clazz, String uninomial, String infrag... Andreas Kohlbecker
11:08 PM Revision 9d192006 (cdmlib): ref #8651 register UUID lists for distribution accumulation webservice
Andreas Müller
11:08 PM Revision 39c4cced (cdmlib): cleanup
Andreas Müller
09:03 PM Revision 83c72818 (cdmlib): fix #8676 adding authorship parameter to countTaxaByName
Andreas Kohlbecker
09:03 PM Revision f31f3e26 (cdmlib): updating jetty microversion in launcher
Andreas Kohlbecker
06:36 PM feature request #6337: simple web ui to trigger the transmission engine distribution
Andreas (and maybe Norbert, Eckhard). Can you please decide if this is still needed at all. I guess if a TaxEditor UI... Andreas Müller
06:28 PM feature request #6352: Add Transmission Engine trigger to Admin menu
This is more or less a duplicate for #8677. There it is defined as called in "Set subtree" menu.
Probably we need di...
Andreas Müller
06:16 PM task #8651 (In Progress): Unify description aggregation methods (distribution and structured desc...
This is basically done but there are mutliple open tasks Andreas Müller
06:14 PM feature request #5176 (Resolved): TransmissionEngineDistribution can run on selected taxa
This should be fixed. Andreas Müller
06:13 PM bug #4134 (Resolved): Transmissionengine Distribution seems to miss distributions for higher Taxa
I set to resolved as I guess it is fixed. But needs to be reviewed. Andreas Müller
06:09 PM feature request #8470: Handle username constraints in user and group editing
I guess this is for review Andreas Müller
11:37 AM feature request #8470: Handle username constraints in user and group editing
Andreas Müller wrote:
> Also in the "New" dialog there is a message "Input cannot be empty". Also here further infor...
Katja Luther
11:36 AM feature request #8470 (Resolved): Handle username constraints in user and group editing
Andreas Müller wrote:
> Can you please leave a message how exactly you changed the issue discussed in note 7 and 8. ...
Katja Luther
10:53 AM feature request #8470: Handle username constraints in user and group editing
Also in the "New" dialog there is a message "Input cannot be empty". Also here further information on the allowed cha... Andreas Müller
10:52 AM feature request #8470: Handle username constraints in user and group editing
Can you please leave a message how exactly you changed the issue discussed in note 7 and 8. The discussion was not en... Andreas Müller
10:49 AM feature request #8470: Handle username constraints in user and group editing
Andreas Müller wrote:
> Now when creating a new user the bulkeditor is dirty. When NOT saving the bulk editor and af...
Andreas Müller
10:47 AM feature request #8470 (Feedback): Handle username constraints in user and group editing
Now when creating a new user the bulkeditor is dirty. When NOT saving the bulk editor and after reopening the bulk ed... Andreas Müller
06:08 PM feature request #8677 (In Progress): Add distribution aggregation to set subtree menu
There is a new long running task "DisributionAggregation" which runs on a TaxonNodeFilter (#8651 and others). It shou... Andreas Müller
04:48 PM Revision c655943d (cdmlib): ref #8651 factory method and base constructor for aggregation configu...
Andreas Müller
03:22 PM EDIT Platform Etablierung task #8578: Discuss and find appropriate terms for major editor parts (window, view, editor, pane...
Die Umfrage ist abgeschlossen und ausgewertet (attachment:Taxeditor-Terms-Poll-2019.pdf):
-----
Hallo zusammen,
...
Andreas Kohlbecker
03:21 PM Revision a51edae3 (cdmlib): ref #8651 unify invocation call in LongRunninTasksService
Andreas Müller
03:00 PM Revision 140a83b3 (taxeditor): ref #8470: change null to empty in message
Katja Luther
02:54 PM Revision 768595a5 (taxeditor): ref #8350: avoid IllegalArgumentException
Katja Luther
02:51 PM Revision e116bd58 (taxeditor): fix NPE in StoreUtil
Katja Luther
02:37 PM Revision a2dd1526 (cdmlib): ref #8651 use explicit conifguration for structured descriptions
Andreas Müller
02:27 PM Revision 68c9d8e4 (taxeditor): Rename menu entry for DDS navigator
Patrick Plitzner
01:45 PM Revision 99a9422e (taxeditor): ref #8667: minor
Katja Luther
01:35 PM Revision 755b2883 (taxeditor): ref #8667: smaller layout issues for orcids
Katja Luther
01:35 PM Revision df2a4c41 (taxeditor): ref #8667: l10n for orcid element
Katja Luther
01:35 PM Revision 95622e27 (taxeditor): ref #8470: user/group creation string localization
Katja Luther
01:35 PM Revision a02567b7 (taxeditor): layout issues for create taxonnode wizard
Katja Luther
01:35 PM Revision 905fdec1 (taxeditor): ref #8631: same layout for unit id and nomenclatural code combobox
Katja Luther
01:35 PM Revision 5dd36b69 (taxeditor): ref #8470: user/group creation continue
Katja Luther
01:03 PM Revision 7f601c27 (taxeditor): ref #8651 Use unified aggregation class for matrix aggregation
Patrick Plitzner
01:02 PM Revision 5f993e31 (taxeditor): ref #7019 Fix menu sort order of navigation context menu
Patrick Plitzner
12:04 PM bug #8675: Make Ranks sortable by natural order
Best place might be the Names-Ranks preference page Andreas Müller
12:03 PM bug #8675 (New): Make Ranks sortable by natural order
This was already available in past but seems being lost in current version. Andreas Müller
11:42 AM bug #8628 (Closed): Add ORCID as person identifier
this message is easier to understand how the identifier should look like Katja Luther
09:40 AM bug #8628 (Resolved): Add ORCID as person identifier
I adapted the error messages a bit. Can you please review again? Andreas Müller
11:40 AM bug #8664 (Closed): SQLGrammarException when opening Specimen selection
I tested again and it seems to work now. Andreas Müller
11:34 AM feature request #8253 (Resolved): Authors for genus autonyms
By the way the parser for me now also works with names like "Achnanthes Bory sect. Achnanthes". So can you please che... Andreas Müller
11:30 AM feature request #8253: Authors for genus autonyms
Katja Luther wrote:
> Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes...
Andreas Müller
11:19 AM Revision 5394c18a (cdmlib): Fix potential class cast exception
Patrick Plitzner
11:19 AM Revision 46278434 (cdmlib): ref #8651, #8467 Use unified aggregation class for matrix aggregation
- Link specimen descriptions as sources as direct CDM entities Patrick Plitzner
10:56 AM Revision 6d1c29e8 (taxeditor): ref #8470: user/group editor should not be dirty after creating ne...
Katja Luther
10:38 AM feature request #7019: sort import menu
Kannst du dann noch umbenennen: ABCD => ABCD file; Excel Normal Explicit Taxa => Exel Normal Explicit; RIS Referenze... Andreas Müller
10:37 AM feature request #7019: sort import menu
Andreas Müller wrote:
> It seems to depend on experimental being switcht on or not. In later case the old menu appea...
Andreas Müller
10:24 AM feature request #7019: sort import menu
It seems to depend on experimental being switcht on or not. In later case the old menu appears. Andreas Müller
10:02 AM feature request #7019: sort import menu
I still get the old menu no matter what I do. I deleted the .metadata folder, I downloaded a completely new TaxEditor... Andreas Müller
09:39 AM Revision e82373d1 (cdmlib): ref #8628 Improve error messages for ORCID parsing
Andreas Müller
09:26 AM Revision 00fafe2a (cdmlib): ref #8651 remove MarkerType.Computed where possible
Andreas Müller
09:25 AM Revision c597851f (cdmlib): cleanup
Andreas Müller
08:34 AM Revision 291ea3f3 (cdmlib): ref #8651 fix failing tests due to order of aggregation
Andreas Müller
01:51 AM Revision 3a97a754 (cdmlib): ref #8651 remove some comments and handle AggregationMode correctly
Andreas Müller
01:40 AM Revision d062baaf (cdmlib): ref #8651 fix failing tests due to use of old description markers
Andreas Müller
01:39 AM Revision 7c03912b (cdmlib): ref #8651 merge area and rank aggregation for DistributionAggregation
Andreas Müller

11/11/2019

12:46 AM Revision 406d4d96 (cdmlib): fix max rank in DwcaExportController
Andreas Müller
12:45 AM Revision 3b1c92ca (cdmlib): ref #5176 add all taxon node filter attributes to distribution aggreg...
Andreas Müller
12:44 AM Revision 5c148b4e (cdmlib): ref #8651 more specific description type for DistributionAggregation
Andreas Müller
11:48 PM Revision 3807d9cb (cdmlib): cleanup
Andreas Müller
11:46 PM Revision 6be3adaa (cdmlib): ref #5176, ref #8651 make DistributionAggregation treeIndex based and...
Andreas Müller
11:38 PM feature request #4366: Transmissionengine Distribution: implement rules for source references
From AG:
The original BM Transmission Engine was handled references ONLY for the Med_Check_List 2 use cases. For E...
Andreas Müller
11:38 PM task #8674: configure cdm-server docker image to run with jemalloc
the new docker image is now based on ubuntu:bionic since jemalloc in alpine Linux fails with segfault.
Therefore I ...
Andreas Kohlbecker
11:33 PM task #8674 (Resolved): configure cdm-server docker image to run with jemalloc
Applied in changeset commit:cdm-server|a9e82e311a06d536699eefabdf13b89fbb8e6220. Andreas Kohlbecker
02:41 PM task #8674 (Closed): configure cdm-server docker image to run with jemalloc
Andreas Kohlbecker
11:33 PM Revision a9e82e31 (cdm-server): fix #8674 docker image based on ubuntu:bionic with openjdk8 and j...
Andreas Kohlbecker
11:31 PM Revision 3fe716be (cdm-server): gitignore
Andreas Kohlbecker
02:04 PM feature request #8667: Make Person.orcid editable in TaxEditor
Please add space after "ORCID won't be saved!" , before the real error message. Andreas Müller
02:01 PM feature request #8667 (Feedback): Make Person.orcid editable in TaxEditor
The error message does not always have enough space
![](picture969-1.png)
Andreas Müller
12:39 PM feature request #8667 (Resolved): Make Person.orcid editable in TaxEditor
The field is added to the editor. please review. Katja Luther
01:58 PM feature request #8673: Allow OriginalSource to link to other CDM objects
Can you please review?
Please also have in mind that webservices should not deliver the full cdmobject and maybe e...
Andreas Müller
01:52 PM bug #8631 (Feedback): ABCD import fails to put new taxa into the classification, create mediaspec...
So the layout still needs some update for linux, I guess. Andreas Müller
11:08 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
This is how it looks for me. Started the editor from the IDE.
![](picture468-1.png)
Patrick Plitzner
12:59 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
configuring the test server to use `jemalloc` instead of `malloc?` drastically reduced the native memory overhead:
...
Andreas Kohlbecker
12:50 PM bug #8628: Add ORCID as person identifier
This is difficult because multiple formats are possible (with http, https, only orcid.org or completely missing all p... Andreas Müller
11:06 AM bug #8628 (Feedback): Add ORCID as person identifier
Could you add an example in the exception message to show how it should look like. And that an x at the end is possib... Katja Luther
12:37 PM feature request #8253 (Feedback): Authors for genus autonyms
Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes sect. Achnanthes Bory,... Katja Luther
12:32 PM feature request #8470: Handle username constraints in user and group editing
please review Katja Luther
12:12 PM Revision c1217ecf (cdmlib): ref #8673 Fix NPE for OriginalSourceBase.getCdmSource
Andreas Müller
11:14 AM feature request #7019: sort import menu
Tried this morning. Seems to work. Please download and try again. Patrick Plitzner
11:02 AM Revision 11761cac (taxeditor): Externalize fragment IDs
Patrick Plitzner
11:02 AM Revision 39913f14 (taxeditor): Add constant for term search to default perspective
Patrick Plitzner
10:49 AM Revision a704339f (taxeditor): ref #8667: add orcid to person detail element - continue
Katja Luther
10:18 AM Revision b2e5f9bf (taxeditor): ref #8667: add orcid to person detail element
Katja Luther
09:47 AM bug #8530: Multiple Representation Exceptions when editing Textual Type Designations
mail Inan Erdogan:
ich glaube das passiert bei mir fast ausschliesslich, wenn ich entweder im Hauptansichtsfeld de...
Katja Luther
09:37 AM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
AM:
Ja, ich habe dann später auch festgestellt, dass die Aggregation bis zum Tribus in dem Fall gewünscht war. Dah...
Andreas Müller
09:28 AM bug #4134 (In Progress): Transmissionengine Distribution seems to miss distributions for higher Taxa
NK:
Vor eine Neuaggregation können und sollten die Neuberechnungen auf Subtribus- und Tribus-Ebene gelöscht werden...
Andreas Müller
09:37 AM Revision cb45e05b (taxeditor): ref #8631: layout issues in abcd import wizard page and refresh of...
Katja Luther

11/10/2019

12:30 PM Revision c8c05549 (cdmlib): cleanup
Andreas Müller
12:30 PM Revision 186cf7ed (cdmlib): ref #8673 add Cascade.Delete and orphanRemoval and handle getter/sett...
Andreas Müller

11/09/2019

06:37 PM Revision 3aa37a25 (cdmlib): ref #8651 remove unnecessary dependency DistributionAggregation in De...
Andreas Müller
06:14 PM Revision d68e1b58 (cdmlib): ref #8651 try to fix failing repository dependency injection in Descr...
Andreas Müller
05:55 PM Revision ade857dd (cdm-vaadin): fix #8673 update Vaadin test DB to CdmLinkSource changes
Andreas Müller
05:54 PM Revision 5e7c747f (taxeditor): fix #8673 update TaxEditor test DB to CdmLinkSource changes
Andreas Müller
05:52 PM Revision 8049524f (cdmlib): ref #8651 try to fix failing repository dependency injection in Descr...
Andreas Müller
05:51 PM Revision b45755b5 (cdmlib): cleanup
Andreas Müller
05:43 PM feature request #8673 (Resolved): Allow OriginalSource to link to other CDM objects
Applied in changeset commit:cdmlib|93ad7e545dc77e63b68e434c62c8560a68bb9dfb. Andreas Müller
12:33 PM feature request #8673 (Closed): Allow OriginalSource to link to other CDM objects
Currently links are only available to Reference and (external) URIs. However, especially for adding sources to aggreg... Andreas Müller
05:41 PM Revision 93ad7e54 (cdmlib): fix #8673 Add CdmLinkSource to OriginalSourceBase
Andreas Müller
01:14 PM Revision 8bbb7d89 (cdmlib): ref #8651 try to fix compile error in DescriptionListController
Andreas Müller
12:42 PM Revision a7e34ddd (cdmlib): cleanup
Andreas Müller
12:41 PM Revision 3bab771f (cdmlib): ref #8651 remove @Service annotation from DistributionAggregation and...
Andreas Müller
12:23 PM feature request #4366 (Feedback): Transmissionengine Distribution: implement rules for source ref...
As this ticket is E+M specific, discusses only specific cases and neglects also to mention discussion from #2625 (att... Andreas Müller
11:40 AM feature request #4366: Transmissionengine Distribution: implement rules for source references
Andreas Kohlbecker wrote:
> Replying to [[comment1|a.kohlbecker]]:
>
> > Hallo Andreas,
>
> >
>
> > dem l...
Andreas Müller
12:17 PM task #8672 (In Progress): Source handling during (distribution) aggregation
There are different possibilities to handle sources during aggregation of factual (distribution and structured descri... Andreas Müller
11:24 AM bug #8670: Unwanted distribution aggregation/display on 2 levels
> NK:
> Frage: wenn in allen Fällen auf Level 3 aggregiert werden muss (**ist das so?**), lässt sich dann nicht weni...
Andreas Müller
10:54 AM task #8671: Distribution in E+M (BM) on different levels
SQL to find such cases in E+M BM:
~~~
SELECT occ.SummaryStatus, n.FullNameCache, pt.PTRefFk, n.NameCache
FROM em...
Andreas Müller
10:08 AM task #8671: Distribution in E+M (BM) on different levels
Eine Lösung für dieses Problem könnte sein, dass man nicht (wie in #8670) die Areale aufwärts aggregiert sondern abwä... Andreas Müller
09:28 AM task #8671 (In Progress): Distribution in E+M (BM) on different levels
We may need to solve the below problem in Euro+Med (Berlin Model) with new functionality in CDM.
=====
AM:
I...
Andreas Müller

11/08/2019

12:29 AM bug #8670: Unwanted distribution aggregation/display on 2 levels
It needs to be decided if this is an aggregation issue or a display (output) issue. Andreas Müller
12:29 AM bug #8670 (Resolved): Unwanted distribution aggregation/display on 2 levels
NK:
Der Schritt der Aggregation auf der Ebene des primären Taxons von level 3 auf level 4 führt:
(a) zu einer un...
Andreas Müller
 

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