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From 10/21/2018 to 11/19/2018

Today

05:59 PM Revision b0e76d4c (cdmlib): adding iReport to ReferencePropertyDefinitions - 2
Andreas Kohlbecker
05:58 PM Revision 56c52253 (cdmlib): adding iReport to ReferencePropertyDefinitions
Andreas Kohlbecker
05:56 PM task #7758: Manual cleanup after E+M import
Make Strid & Kit Tan a BookSection
~~~
in Strid & Kit Tan, Mount. Fl. Greece 1: 570. 1986 | Euphorbia myrsinites ...
Andreas Müller
04:55 PM bug #7223: ReferenceEditor: disable fields depending on the Reference type
except of the institution, organization and school fields which are handled in #7480 all issues named in this ticket ... Andreas Kohlbecker
04:50 PM Revision c397c928 (cdm-vaadin): ref #7223 fixing field visibility of various reference types
Andreas Kohlbecker
04:49 PM Revision dd8c884c (cdm-vaadin): new reference for registration starts as Article
Andreas Kohlbecker
01:22 PM Revision 32e7335f (cdmlib): ref #7837 cleanup + add TOC generation example
Patrick Plitzner
12:59 PM feature request #7217 (Resolved): SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude ...
I added double apostrophe as marker for seconds. This fixes the tests.
I also replaced the UTF8 constants by links...
Andreas Müller
12:57 PM Revision ac6f2b2b (cdmlib): ref #7217 add double apostrophe as second marker
Andreas Müller
12:21 PM Revision 1b996cca (cdmlib): ref #7902, ref #7901 add generic to allow return types for defaultVal...
Andreas Müller
12:09 PM feature request #7912 (New): Enhance checkbox tree viewer
Implement buttons:
* to (de-)select all children
* select all children recursively or only direct children
Vis...
Patrick Plitzner
11:52 AM Revision 3ca67b85 (cdmlib): ref #7217 creating test to reproduce long lat parsing problem
Andreas Kohlbecker
11:38 AM Revision 48cdd986 (cdmlib): CoordinateConverterTest using unicode constants for all signs
Andreas Kohlbecker
10:50 AM Revision 5250237d (cdm-vaadin): using IntegerConverter for Geolocation.errorRadius field
Andreas Kohlbecker
10:33 AM feature request #7886: Divide local preferences to db dependend local preferences
ok Andreas Müller
10:09 AM feature request #7886 (Resolved): Divide local preferences to db dependend local preferences
Andreas Müller wrote:
> is the resolved or are there open issues?
>
> Maybe we need to clearly define somewhere w...
Katja Luther
10:32 AM bug #7911: Changing areas in Distribution Editor yields to wrong column labels
can you please link to other Distribution Editor tickets, especially the one for open issues. Andreas Müller
10:30 AM bug #7639 (Resolved): SpecimenTypeDesignationEditor: Altitude not saved and displayed properly
Problem solved, please review. Andreas Kohlbecker
10:29 AM feature request #7600 (Resolved): public setters for entity collections
Reopen for doing review. Andreas Müller
10:28 AM Revision 6d6b02e9 (cdm-vaadin): ref #7639 using fixed NumberFormat for integers to avoid locale c...
Andreas Kohlbecker
10:28 AM Revision 943f7a01 (taxeditor): Merge branch 'develop' into wordExport
Patrick Plitzner
10:28 AM Revision e0e575d0 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
10:06 AM Revision 617f3dc9 (cdm-vaadin): ref #7639 removing custom decimal point, comma translation witch ...
Andreas Kohlbecker
09:37 AM Revision 3bc664c1 (cdmlib): code cleaning, removing system.err...
Katja Luther

11/16/2018

03:31 PM bug #7911 (Resolved): Changing areas in Distribution Editor yields to wrong column labels
please review. Katja Luther
03:30 PM bug #7911: Changing areas in Distribution Editor yields to wrong column labels
this is fixed in hotfix 5.4.3 and with commit Revision fecf5fd5 Katja Luther
03:26 PM bug #7911 (Resolved): Changing areas in Distribution Editor yields to wrong column labels
when changing the areas displayed in distribution editor yields to wrong order of column labels. Katja Luther
03:27 PM Revision fecf5fd5 (taxeditor): ref #7911: fix wrong order index of columns in distribution editor...
Katja Luther
03:20 PM Revision 7e445485 (taxeditor): Merge branch 'hotfix/5.4.3'
jenkins
02:37 PM Revision 5cb02a23 (taxeditor): code cleaning
Katja Luther
02:06 PM Revision 5a143666 (cdmlib): ref #7760 Add collection code to citation
Patrick Plitzner
02:02 PM Revision ae00edaa (cdmlib): ref #7837 Use docx4j to generate docx file
Patrick Plitzner
01:57 PM Revision 8f3316f4 (taxeditor): fix problems with column index of distribution editor when changin...
Katja Luther
01:42 PM Revision e6639161 (taxeditor): Updated version in pom / project files to taxeditor version : 5.4....
jenkins
01:27 PM feature request #7600 (Closed): public setters for entity collections
I think it is save now to close this issue. Andreas Kohlbecker
01:26 PM Revision c37df82d (cdmlib): ref #7600 removing EntityCollectionSetterAdapter fields from Team and...
Andreas Kohlbecker
01:15 PM bug #7910 (Resolved): TermOrPersonField: readonly exception on bindig data
Hallo Henning,
Das TeamOrPersonField sollte nun korrekt funktionieren. Bitte teste verschiedene Varianten durch.
Andreas Kohlbecker
01:06 PM bug #7910: TermOrPersonField: readonly exception on bindig data
I implemented the `EntityCollectionSetterAdapter` (#7600) in order to provide a public setter method for teammembers.... Andreas Kohlbecker
01:13 PM Revision ea92bdaa (cdm-vaadin): ref #7910 TeamOrPersonField adapting read only state handling to ...
Andreas Kohlbecker
01:09 PM Revision 64bf3ea5 (cdm-vaadin): ref #7910 ToManyRelatedEntitiesListSelect: no longer setting read...
Andreas Kohlbecker
12:47 PM Revision 695f0fab (taxeditor): Revert "Revert "ref #7849: move general db preferences to its own ...
This reverts commit e78f3e6c944dd0630daef5ecfab96773a875c695. Patrick Plitzner
09:05 AM Revision 75052754 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner

11/15/2018

04:46 PM Revision ea42fa08 (cdmlib): ref #7600 EntityCollectionSetterAdapter no longer caching Methods to ...
Andreas Kohlbecker
04:26 PM feature request #7600: public setters for entity collections
Another serialization issue:
~~~
login : admin
editor version : 5.5.0.qualifier
server : localhost (localhost-d...
Andreas Kohlbecker
04:10 PM feature request #7600 (In Progress): public setters for entity collections
EntityCollectionSetterAdapter is causing problems in the http-invoker during serialization:
~~~
login : admin
ed...
Andreas Kohlbecker
02:44 PM feature request #7600 (Feedback): public setters for entity collections
The `EntityCollectionSetterAdapter` is implemented and being used for `Team.teamMembers` and `AnnotatableEntity.annot... Andreas Kohlbecker
01:56 PM feature request #7600 (In Progress): public setters for entity collections
Andreas Kohlbecker
04:15 PM Revision f978754c (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
04:14 PM Revision 43fd7d93 (cdmlib): ref #7600 EntityCollectionSetterAdapter serializable
Andreas Kohlbecker
03:50 PM Revision 4eed634d (taxeditor): Merge branch 'develop' into wordExport
Patrick Plitzner
03:50 PM Revision a2596a71 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
03:22 PM Revision 8646730e (taxeditor): Close matrix and descriptive data set editor when closing connection
Patrick Plitzner
03:17 PM Revision cd035648 (taxeditor): code cleanup
Patrick Plitzner
03:14 PM Revision 7d85b770 (cdmlib): Return created feature node instead of feature tree
Patrick Plitzner
03:14 PM Revision c41a916e (taxeditor): Fix selection when creating new nodes
Patrick Plitzner
02:54 PM bug #6807 (Rejected): Deleting a FeatureNode is persisted although the editor is set to dirty
with fixing #6806 the saving strategy has changed and the editor is only set to dirty when editing in the details vie... Patrick Plitzner
02:52 PM feature request #6806 (Resolved): Add context menu to FeatureTreeEditor
Patrick Plitzner
02:32 PM feature request #6806 (In Progress): Add context menu to FeatureTreeEditor
Patrick Plitzner
02:52 PM Revision 1bedfdc0 (taxeditor): code cleaning
Patrick Plitzner
02:50 PM Revision 4f315fd2 (taxeditor): Use utility method to confirm deletion
Patrick Plitzner
02:50 PM Revision 41e1666a (taxeditor): ref #6806 Fix dirty state handling and saving in feature tree editor
Patrick Plitzner
02:50 PM Revision 9fa62583 (cdmlib): ref #7600 adding usage example to EntityCollectionSetterAdapter doc
Andreas Kohlbecker
02:33 PM Revision 288109a7 (taxeditor): ref #6806 Add isDirty() to IE4SavablePart + extract dirty check to...
Patrick Plitzner
02:24 PM Revision ba1a500d (cdmlib): ref #7600 renaming arument in EntityCollectionSetterAdapter
Andreas Kohlbecker
02:23 PM Revision 0ba3b57d (cdmlib): ref #7600 using EntityCollectionSetterAdapter for AnnotatableEntity.a...
Andreas Kohlbecker
02:23 PM Revision f1ea206f (cdmlib): ref #7600 using EntityCollectionSetterAdapter for Team.teamMembers - ...
Andreas Kohlbecker
01:19 PM Revision ffc36c9b (cdmlib): ref #7600 using EntityCollectionSetterAdapter for Team.teamMembers
Andreas Kohlbecker
01:18 PM Revision eb6691aa (cdmlib): ref #7600 EntityCollectionSetterAdapter implemented
Andreas Kohlbecker
12:21 PM Revision 1e4ee5f1 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
11:18 AM Revision cf349935 (taxeditor): Ask for saving before executing operations
Patrick Plitzner
11:18 AM Revision 54571b82 (taxeditor): Add savablePart to FeatureNodeDropAdapter
Patrick Plitzner
09:38 AM bug #7910: TermOrPersonField: readonly exception on bindig data
The preferred solution to this is making the `setTeamMembers()` in Team `public`
Are you ok with this Andreas Mül...
Andreas Kohlbecker
08:45 AM bug #7910 (In Progress): TermOrPersonField: readonly exception on bindig data
The root of this problem is the Team class in which the setter for members is `protected`. This causes the `PropertyD... Andreas Kohlbecker
08:25 AM bug #7910 (Resolved): TermOrPersonField: readonly exception on bindig data

~~~
Caused by: com.vaadin.data.Buffered$SourceException
at com.vaadin.ui.AbstractField.setPropertyDataSource(A...
Andreas Kohlbecker

11/14/2018

06:37 PM feature request #7899: enable orthographic name correction in Vaadin
Im Vergleich zu meinem Vorschlag habe ich zu Mastogloia wulffii im TaxEditor Mastogloia wulffiae neu angelegt, diesel... Wolf-Henning Kusber
05:59 PM Revision 5ff2ddc5 (cdm-vaadin): adding user information to PopupEditorException messages
Andreas Kohlbecker
04:16 PM Revision 09d9b24d (cdmlib): ref #7837 Use ODFDOM for word export
Patrick Plitzner
03:12 PM Revision 4516c47c (cdm-vaadin): ref #7908 disabling redmine message check in redmine communicatio...
Andreas Kohlbecker
02:57 PM bug #7908 (New): Redmine communication hub slows down RegistrationWorkingSets
As stated in #7785 the checking for messaged in the Redmine instance serving as communication hub slows down the disp... Andreas Kohlbecker
02:52 PM task #7785 (Closed): CdmUserHelper caches permission information
Andreas Kohlbecker
02:51 PM task #7785: CdmUserHelper caches permission information
The CachingCdmUserHelper effectively brings a performance boost of ~2 seconds for the big working set "Kulikovskiy, M... Andreas Kohlbecker
02:23 PM Revision 4dadd125 (cdm-vaadin): ref #7785 fixing usage of wrong cacher method which prevented fro...
Andreas Kohlbecker
01:52 PM Revision 32a4157a (cdm-vaadin): using CachingUserHelper also with RegistrationItemNameAndTypeButt...
Andreas Kohlbecker
11:29 AM Revision 2be2ac05 (cdm-vaadin): ref #7906 ContinueAlternativeCancelDialog implemented
Andreas Kohlbecker
11:13 AM bug #7907 (New): Annotations in Reference page do not respect the annotation settings
... habe gerade gesehen, dass im Production Portal unsere internal notes angezeigt werden.
https://www.phycobank....
Andreas Kohlbecker

11/13/2018

06:21 PM feature request #7906 (Closed): AbstractPopupEditor: Notify user on editor changes and provide op...
Andreas Kohlbecker
06:20 PM feature request #7906 (Resolved): AbstractPopupEditor: Notify user on editor changes and provide ...
Applied in changeset commit:cdm-vaadin|de9c748c7ddf20de3021ee578f644d58d9bc5683. Andreas Kohlbecker
06:19 PM feature request #7906: AbstractPopupEditor: Notify user on editor changes and provide options to ...
Confirmation dialog implemented:
![](picture491-1.png)
Andreas Kohlbecker
05:01 PM feature request #7906 (Closed): AbstractPopupEditor: Notify user on editor changes and provide op...
Andreas Kohlbecker
06:20 PM Revision de9c748c (cdm-vaadin): fix #7906 editor cancel confirmation dialog implemented
Andreas Kohlbecker
05:13 PM feature request #7903: Add treeIndex with rank to cdm light export
Katja Luther wrote:
> noch eine kurze Anmerkung, die Sortierung im Navigator ist eine Preference im Editor, man kann...
Andreas Müller
01:47 PM feature request #7903: Add treeIndex with rank to cdm light export
noch eine kurze Anmerkung, die Sortierung im Navigator ist eine Preference im Editor, man kann wählen zwischen alphab... Katja Luther
01:40 PM feature request #7903 (New): Add treeIndex with rank to cdm light export
Hallo,
hier die Mails zur Taxon-Sortierung.
Wenn ich den TreeIndex richtig verstehe, dann ist das eine weitere Tabe...
Katja Luther
04:52 PM bug #7878 (Resolved): Edit CollectionCode not saved
fixed! Please review. Andreas Kohlbecker
04:51 PM Revision a043ae5b (cdm-vaadin): #7878 adapting SpecimenTypeDesignationWorkingsetEditorPresenter t...
Andreas Kohlbecker
04:28 PM bug #7905 (Resolved): NPE in InstitutionEditorPresenter
Applied in changeset commit:cdm-vaadin|e440fd7507f08b9c3e1c30af34f53d35bb044c63. Andreas Kohlbecker
03:32 PM bug #7905 (Resolved): NPE in InstitutionEditorPresenter
[reported by Heba]
http://api.cybertaxonomy.org/phycobank/app/registration#!workingset/0ddaa1fb-99b7-4666-859f-7bd...
Andreas Kohlbecker
04:28 PM Revision e440fd75 (cdm-vaadin): fix #7905 introducing defaultCdmEntityInstatiator and createCdmE...
Andreas Kohlbecker
03:53 PM Revision f277df8a (cdm-vaadin): ref #7900 removing remains from old code
Andreas Kohlbecker
03:36 PM Revision 3732fb9e (cdmlib): fixing LazyInitializationException
Andreas Kohlbecker
03:36 PM Revision ef59fcf5 (cdm-vaadin): SpecimenTypeDesignationWorkingSetServiceImpl load method read-only
Andreas Kohlbecker
03:23 PM bug #7904 (Feedback): DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() create...
I suggest to modifications:
1. `DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber()` without the ...
Andreas Kohlbecker
02:12 PM bug #7904: DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates temporary...
The creation of Teams in this methods seems to be completely unnecessary Andreas Kohlbecker
02:06 PM bug #7904 (Feedback): DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() create...
The root cause for the excessive memory allocation reported in #7900 is the `DerivedUnitFacadeFieldUnitCacheStrategy.... Andreas Kohlbecker
02:11 PM bug #7900: Excessive heap consuption in RegistrationWorkingsetEditor with big workingsets
The `DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber()` is actually the root cause for the massive... Andreas Kohlbecker
01:46 PM Revision c3ebf587 (taxeditor): Merge branch 'develop' into wordExport
Patrick Plitzner
01:43 PM Revision eed28c29 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
01:42 PM feature request #7887 (Resolved): Use DTOs in term editor
Katja Luther wrote:
> One open issue:
>
> when creating a new defined term, the selection is still on the vocabul...
Patrick Plitzner
01:39 PM Revision 2e222ab7 (taxeditor): ref #7887 Correctly evaluate children in term content provider
Patrick Plitzner
01:27 PM Revision 74515372 (taxeditor): ref #7887 Select newly created term
Patrick Plitzner
01:27 PM Revision 533c3163 (cdmlib): ref #7887 Return newly created DTO from service method
Patrick Plitzner
12:27 PM Revision 573841a9 (taxeditor): ref #7887 Remove unused classes
Patrick Plitzner
12:24 PM Revision 73c47718 (taxeditor): ref #7887 Code cleanup
Patrick Plitzner
12:21 PM Revision f38ea76f (taxeditor): ref #7887 Remove grayed value preferences from distributon wizards
Patrick Plitzner
12:16 PM Revision 7b3ca53d (taxeditor): ref #7887 Fix initial grayed state in checkbox composite
Patrick Plitzner
11:20 AM Revision 20f51c0a (taxeditor): ref #7887 Fix preference persisting (based on DTOs)
Patrick Plitzner
11:20 AM Revision c6b9b74b (taxeditor): ref #7887 Adapt to service layer changes
Patrick Plitzner
11:20 AM Revision 75be5411 (taxeditor): ref #7887 code cleanup
Patrick Plitzner
11:20 AM Revision cae3bd94 (taxeditor): ref #7875 Do not save grayed values
Patrick Plitzner
11:20 AM Revision 6a4bbc46 (taxeditor): ref #7887 Fix javadoc
Patrick Plitzner
11:20 AM Revision b9ee0c73 (cdmlib): ref #7887 Remove getParent()
Patrick Plitzner
11:20 AM Revision e65bf3fb (cdmlib): ref #7887 Set parent DTOs during initialization
Patrick Plitzner
11:20 AM Revision 1cac1886 (cdmlib): ref #7887 Refactor TermDto usage
Patrick Plitzner
11:20 AM Revision 37d1c24f (cdmlib): ref #7887 Add "parent" DTOs to TermDto
Patrick Plitzner
09:19 AM Revision 923fd553 (cdmlib): ref #7900 reverting : read-only transactions in DTO service with Prop...
Andreas Kohlbecker

11/12/2018

07:21 PM bug #7236: Make available distribution status a database preference for TaxEditor distribution ed...
Probably (1) is solved now. Can you verify this?
Is (2) still an open issue or is it solved? Or will it be solved ...
Andreas Müller
07:13 PM feature request #7345: [E+M] Common name references selectable in TaxEditor
Can you add openIssues to the ticket, so we remember what is still missing. Or is it already fully solved and can be ... Andreas Müller
07:10 PM bug #7699: NPE when searching for specimen in bulk editor
As this does not seem to be solved yet I move it to the next version. Andreas Müller
07:08 PM feature request #7886: Divide local preferences to db dependend local preferences
is the resolved or are there open issues?
Maybe we need to clearly define somewhere which preferences are DB depen...
Andreas Müller
06:21 PM bug #7900 (Resolved): Excessive heap consuption in RegistrationWorkingsetEditor with big workingsets
Andreas Kohlbecker
04:45 PM bug #7900: Excessive heap consuption in RegistrationWorkingsetEditor with big workingsets
The root cause for the problem is the `RegistrationWorkingsetPresenter.onDoneWithTaxonnameEditor()` method in which a... Andreas Kohlbecker
02:12 PM bug #7900: Excessive heap consuption in RegistrationWorkingsetEditor with big workingsets
It seems as if the `DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber()` is causing the massive memo... Andreas Kohlbecker
06:05 PM bug #7892 (Closed): RegistrationWorkingsetEditor: LIE creating new name for book section
Andreas Kohlbecker
05:46 PM bug #7892 (Feedback): RegistrationWorkingsetEditor: LIE creating new name for book section
so this issue is solved and we can close it now? Andreas Kohlbecker
05:19 PM Revision a606cd84 (taxeditor): rename SHOW_NAME_IN_SOURCE to SHOW_NAMESPACE_IN_SOURCE in taxeditor
Andreas Müller
05:14 PM Revision 37058586 (taxeditor): rename SHOW_NAME_IN_SOURCE to SHOW_NAMESPACE_IN_SOURCE in taxeditor
Andreas Müller
05:07 PM Revision 4d18f3c4 (cdmlib): ref #7900 read-only transactions in DTO service with Propagation.REQU...
Andreas Kohlbecker
05:04 PM feature request #7902 (In Progress): Allow default values for PreferencePredicates
Generally implemented but for existing predicates we still need to define default values.
For boolean and/or UUIDs...
Andreas Müller
04:41 PM feature request #7902 (In Progress): Allow default values for PreferencePredicates
Andreas Müller
04:51 PM feature request #7901 (Resolved): Make PreferencePredicates an interface to allow multiple implem...
Andreas Müller
04:39 PM feature request #7901 (Resolved): Make PreferencePredicates an interface to allow multiple implem...
Andreas Müller
04:49 PM Revision ca8969f2 (cdmlib): ref #7901 implement IPreferencePredicate in CdmPreference and service...
Andreas Müller
04:48 PM Revision c47fd6c0 (cdmlib): ref #7901, ref #7902 Create IPreferencePredicate and include getDefa...
Andreas Müller
04:46 PM Revision 07bbd695 (cdm-vaadin): ref #7900 comitting writable transaction before loading the regis...
Andreas Kohlbecker
12:43 PM feature request #7887 (Feedback): Use DTOs in term editor
One open issue:
when creating a new defined term, the selection is still on the vocabulary, for lists with several...
Katja Luther
12:40 PM feature request #7887 (Closed): Use DTOs in term editor
looks fine now! Katja Luther
08:59 AM feature request #7887 (Resolved): Use DTOs in term editor
Katja Luther wrote:
> some issues I recognized while testing:
>
> * after creating a new vocabulary the editor do...
Patrick Plitzner
12:01 PM Revision 22cfc372 (taxeditor): add empty first page for admin preferences
Katja Luther
11:48 AM Revision 86aaf6da (taxeditor): ref #7887 code cleanup
Patrick Plitzner
11:46 AM Revision 260688cb (taxeditor): ref #7887 Catch potential preference initialization problem
Patrick Plitzner
11:46 AM Revision 18154a72 (taxeditor): ref #7887 Fix preference persisting (based on DTOs)
Patrick Plitzner
11:12 AM Revision e78f3e6c (taxeditor): Revert "ref #7849: move general db preferences to its own tab to a...
This reverts commit b123c0b7320fdddda7c26405b76be8db119f4445. Patrick Plitzner
09:00 AM Revision b743b880 (taxeditor): ref #7887 Speed up saving
- Fix multiple saving of the same term base Patrick Plitzner
08:39 AM Revision 7dd44098 (taxeditor): ref #7887 Refresh term editor when new vocabulary is created
Patrick Plitzner
08:30 AM Revision 49f7b066 (taxeditor): ref #7887 Sort vocabularies in term editor
Patrick Plitzner
08:20 AM Revision 4d8c9172 (taxeditor): ref #7887 code cleanup
Patrick Plitzner

11/09/2018

08:34 PM Revision 0c5910cb (cdmlib): ref #7800 further parsing for volume and edition part and for some sp...
Andreas Müller
04:33 PM Revision a0976016 (cdmlib): ref #7800 2nd fix tests with special characters
Andreas Müller
03:50 PM Revision e6883603 (cdmlib): ref #7800 fix tests with special characters
Andreas Müller
03:02 PM Revision 88710aed (cdmlib): ref #7800 improve parsing of details and reference titles
Andreas Müller
02:54 PM feature request #7887: Use DTOs in term editor
some issues I recognized while testing:
* the details view updates with every keystroke
* sometimes saving takes ...
Katja Luther
01:52 PM Revision 103f7f4a (taxeditor): ref #7887 Use term DTOs for distribution wizards
Patrick Plitzner
12:34 PM bug #7900 (Resolved): Excessive heap consuption in RegistrationWorkingsetEditor with big workingsets

Adding a new name to the registration workingset *Kulikovskiy, M., Lange-Bertalot, H., Metzeltin, D. & al. - Lake B...
Andreas Kohlbecker
12:31 PM Revision 501ab766 (taxeditor): ref #7875 Completely convert area selection to DTOs
- Fix initial selection Patrick Plitzner
12:01 PM Revision eebb08aa (taxeditor): ref #7887 Use term DTOs in feature selection dialog for feature trees
Patrick Plitzner
11:10 AM feature request #7899: enable orthographic name correction in Vaadin
Note: The term "orthographic variant" is to broad for our case, because it includes also variants in different public... Wolf-Henning Kusber
10:56 AM feature request #7899 (New): enable orthographic name correction in Vaadin
Subject: validly published names are in (up to) 10% not correctly formed according to the rules of the ICN. Such name... Wolf-Henning Kusber
09:18 AM Revision a1ab6a74 (cdmlib): ref #7887 Implement term service methods based on DTOs
Patrick Plitzner
09:17 AM report #7898: using jstack on cdmserver with jsvc reports all non native thrads as BLOCKED

Conclusion: jsvc makes it harder to analyse performance problems on the servers since jstack can not be used to get...
Andreas Kohlbecker
09:17 AM report #7898 (Resolved): using jstack on cdmserver with jsvc reports all non native thrads as BLO...
Andreas Kohlbecker
09:08 AM report #7898 (In Progress): using jstack on cdmserver with jsvc reports all non native thrads as ...
Andreas Kohlbecker
09:16 AM Revision a3c56b93 (taxeditor): ref #7887 Use DTOs in term editor
Patrick Plitzner
09:02 AM Revision e6715122 (cdmlib): ref #7887 Rename service methods
Patrick Plitzner
08:50 AM Revision 238ef41a (taxeditor): ref #7887 Fix showViewer() for details view
Patrick Plitzner
08:46 AM Revision 06c08a41 (taxeditor): Fix javadoc
Patrick Plitzner

11/08/2018

06:47 PM report #7898: using jstack on cdmserver with jsvc reports all non native thrads as BLOCKED
next thing to test: start cdm-server without jsvc and analyze the stacks again. Andreas Kohlbecker
06:27 PM report #7898 (Resolved): using jstack on cdmserver with jsvc reports all non native thrads as BLO...
in the cdm-server many threads are blocked.
Analysis of this situation:
(*Used tool: http://fastthread.io*)
...
Andreas Kohlbecker
05:54 PM Revision d101c9cc (cdm-server): eclipse launchers for cdm-webapp and cdmlib-remote-webapp
Andreas Kohlbecker
05:23 PM Revision 82006e78 (cdm-vaadin): ref #7559 referencing issue in comments
Andreas Kohlbecker
03:53 PM Revision 8456b28f (cdmlib): ref #7887 Pass DTO to move method
Patrick Plitzner
03:47 PM Revision eca23fcf (cdmlib): Merge branch 'develop' into termService
Patrick Plitzner
03:46 PM Revision ebc80cbb (cdmlib): try to fix CCE when using OrderedTermVocabulary.getSortedSetOfTerms
Andreas Müller
03:37 PM Revision db5a6115 (taxeditor): Merge branch 'develop' into areaSelect
Patrick Plitzner
03:35 PM Revision 347e9ab8 (cdmlib): Merge branch 'develop' into termService
Patrick Plitzner
03:33 PM Revision 83d112e1 (cdmlib): try to fix CCE when using OrderedTermVocabulary.getEqualTerms
Andreas Müller
03:17 PM bug #7882 (Duplicate): TeamOrPersonField: exception when selecting author
Andreas Kohlbecker
03:15 PM bug #7881: reference selection combobox broken after error in ...
this is most probably a duplicate of #7559 Andreas Kohlbecker
03:12 PM Revision 7bbbad58 (cdm-vaadin): restoring accidentally removed formatter code
Andreas Kohlbecker
03:03 PM bug #7892: RegistrationWorkingsetEditor: LIE creating new name for book section
Test 1 (test system): Book entered as admin into Vaadin, Book section as submitter in vaadin, new name and type for e... Wolf-Henning Kusber
02:46 PM bug #7897: TeamOrPersonField: BindException: The given field is not part of this FieldBinder
Der selbe Fehler war nun reproduzierbar!
http://api.cybertaxonomy.org/phycobank/app/registration#!workingset/b52f4...
Andreas Kohlbecker
02:41 PM bug #7897: TeamOrPersonField: BindException: The given field is not part of this FieldBinder
Genau: es ist 2 x der gleiche String mit unterschiedlicher Referenz, daher Neueingabe.

Ich habe versucht den Fehl...
Andreas Kohlbecker
02:41 PM bug #7897: TeamOrPersonField: BindException: The given field is not part of this FieldBinder
> Ich hatte Abas berolinensis A.Braun eingegeben,
> dann als validated name noch mal Abas berolinensis neu eingegebe...
Andreas Kohlbecker
02:40 PM bug #7897: TeamOrPersonField: BindException: The given field is not part of this FieldBinder
Kann es nicht mehr sagen, konnte es auch nicht nachvollziehen

Ich hatte Abas berolinensis A.Braun eingegeben,
da...
Andreas Kohlbecker
02:40 PM bug #7897: TeamOrPersonField: BindException: The given field is not part of this FieldBinder
Hast du noch ein paar mehr details für mich?

1. Welcher Name,
2. Welcher validated Name dazu?
3. Welchen Auto...
Andreas Kohlbecker
02:40 PM bug #7897 (New): TeamOrPersonField: BindException: The given field is not part of this FieldBinder
Testsystem:
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/537f9b7b-42d4-4b40-949b-1b6...
Andreas Kohlbecker
02:36 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor
hopefully fixed now completely Andreas Kohlbecker
02:30 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
even if the session is cleared in the `CdmStore.saveBean(T bean, AbstractView view)` method in the finally clause, a ... Andreas Kohlbecker
01:58 PM bug #7559 (In Progress): possibly corrupted hiberante session after previous error on saving editor
reopening this issue since it is not fully solved for all cases Andreas Kohlbecker
02:35 PM Revision 6d2a0540 (cdm-vaadin): ref #7559 always clearing session in CdmFilterablePagingProvider
Andreas Kohlbecker
01:58 PM Revision 42ec127d (taxeditor): ref #7887 Pass DTO to move method
Patrick Plitzner
01:55 PM Revision c78fd1ac (cdm-vaadin): improving error messaging: PopupEditorException with editor conte...
Andreas Kohlbecker
01:35 PM Revision 244ab5da (taxeditor): ref #7829 fix compilation errors after changes for !MatchStrategy ...
Andreas Müller
01:15 PM Revision 2843ea50 (taxeditor): ref #7829 fix missing getMatchModeName in TaxEditor
Andreas Müller
12:50 PM bug #7896 (New): NPE, NullPointerException in RelationshipTermBase

~~~
[flora-malesiana] 2018-11-08 12:24:42,410 INFO [qtp1207140081-129] [eu.etaxonomy.cdm.remote.controller.Taxon...
Andreas Kohlbecker
12:48 PM bug #7895 (New): registrationWorkingSetDTO/{uuid} fails dur ot IndexOutOfBoundsException in Regis...
~~~
[palmae] 2018-11-08 12:28:50,646 INFO [qtp1207140081-933] [eu.etaxonomy.cdm.remote.controller.RegistrationDTOCon...
Andreas Kohlbecker
12:37 PM feature request #7894 (In Progress): [CHECK] Import sourceNumber as Identifier for references
Andreas Müller
12:26 PM feature request #7894 (In Progress): [CHECK] Import sourceNumber as Identifier for references
Andreas Müller
12:33 PM Revision f2e74d5a (cdmlib-apps): improve reference import for E+M (edition and volume handling)
Andreas Müller
12:32 PM Revision 8cf6f634 (cdmlib-apps): ref #7894 import source numbers for E+M
Andreas Müller
12:27 PM Revision 8fa67d4b (cdmlib): ref #7894 add E+M sourceNumber voc uuid
Andreas Müller
12:21 PM Revision b3d38029 (cdmlib): cleanup
Andreas Müller
12:20 PM Revision fbe910aa (cdmlib): ref #7829, ref #7800 improve nom. ref. matcher (also changes the resu...
Andreas Müller
12:10 PM Revision 269cc178 (cdmlib): revert: Add series parsing with letters (test) - all unwanted commits
Andreas Müller
12:04 PM Revision 4cab2fd1 (cdmlib): Add series parsing with letters (test)
Andreas Müller
12:01 PM Revision 943941be (cdmlib): add parsing of brackets with "&"
Andreas Müller
11:57 AM Revision 473b1c68 (cdmlib): Add series parsing with letters
Andreas Müller
11:56 AM Revision f6687505 (cdmlib): add regEx negation to UTF8
Andreas Müller
11:44 AM Revision e9311cd0 (taxeditor): ref #7887 Prompt user if editor is dirty (part II)
Patrick Plitzner
11:23 AM Revision ea7c58af (taxeditor): ref #7887 i18n
Patrick Plitzner
11:20 AM Revision 5129bf4e (taxeditor): ref #7887 Prompt user if editor is dirty
Patrick Plitzner
11:16 AM Revision 897bf684 (cdmlib): ref #7887 Fix kindOf query
Patrick Plitzner
11:15 AM Revision 8f2a9479 (taxeditor): ref #7887 Get kindOfs in term content provider
Patrick Plitzner
10:47 AM Revision a258603e (cdmlib): fix parser test
Andreas Müller
10:26 AM Revision 62e62a2f (cdmlib): some improvements to NonViralNameParser
Andreas Müller
10:19 AM Revision f98c2d3d (cdmlib): cleanup
Andreas Müller
10:19 AM Revision 8643e56e (cdmlib): ref #7429 fix order in "publ." parsing and implement for nom. ref. p...
Andreas Müller
10:19 AM Revision cfec8840 (cdmlib): cleanup
Andreas Müller
09:54 AM Revision 325e86cf (taxeditor): ref #7887 Convert delete handler/operation to DTOs
Patrick Plitzner
09:53 AM Revision 1a082a11 (taxeditor): ref #7887 Add generalizations to term content provider
Patrick Plitzner
09:50 AM Revision 1955a290 (cdmlib): ref #7887 Fix potential NPE
Patrick Plitzner
09:50 AM Revision d45330ac (cdmlib): ref #7887 Add generalizations to term DTO
Patrick Plitzner
09:49 AM Revision b3c5aff0 (cdmlib): ref #7887 Fix term moving to new vocabulary
Patrick Plitzner
09:02 AM Revision 3d5dce41 (taxeditor): ref #7887 Implement moving terms for ordered terms
Patrick Plitzner
08:58 AM Revision f740afa5 (cdmlib): ref #7887 Implement moving terms for ordered terms
Patrick Plitzner

11/07/2018

05:46 PM bug #7893 (Closed): RegistrationWorkingsetEditor: canceling new name editor leaves the new name b...
Andreas Kohlbecker
04:37 PM bug #7893 (Resolved): RegistrationWorkingsetEditor: canceling new name editor leaves the new name...
Applied in changeset commit:cdm-vaadin|7d55de9a1fde53d044f9ee8cc51c7a702780ee67. Andreas Kohlbecker
04:36 PM bug #7893 (Closed): RegistrationWorkingsetEditor: canceling new name editor leaves the new name b...
Andreas Kohlbecker
05:45 PM bug #7892: RegistrationWorkingsetEditor: LIE creating new name for book section
please test if this is still reproducible Andreas Kohlbecker
05:44 PM bug #7892 (Resolved): RegistrationWorkingsetEditor: LIE creating new name for book section
Applied in changeset commit:cdm-vaadin|3e625af91f82acd7a9d628e09fe0e2f43f8c84c2. Andreas Kohlbecker
04:28 PM bug #7892 (Closed): RegistrationWorkingsetEditor: LIE creating new name for book section
This LazyInitializationException seems to require special circumstances to be reproducible:
1. login as *admin*
...
Andreas Kohlbecker
05:44 PM Revision 3e625af9 (cdm-vaadin): fix #7892 proper initialization of references for new taxon names
Andreas Kohlbecker
04:42 PM Revision 592cd32e (cdm-vaadin): ref #7893 supplying editor context information for new name button
Andreas Kohlbecker
04:37 PM Revision 7d55de9a (cdm-vaadin): fix #7893 always re-enabling the new name button when the new nam...
Andreas Kohlbecker
03:51 PM Revision 73f51846 (cdmlib): ref #7884 ref #7890 fixing NPE in name controllers
Andreas Kohlbecker
03:26 PM Revision 3c088da3 (cdm-dataportal): ref #7884 ref #7890 fixining some problems in name relations ...
Andreas Kohlbecker
03:05 PM Revision 6bae07b0 (cdmlib): ref #7887 Adapt moving terms based on DTOs
Patrick Plitzner
03:05 PM Revision fd61512c (taxeditor): ref #7887 Adapt moving terms based on DTOs
Patrick Plitzner
12:18 PM Revision d4ea0dd9 (cdm-dataportal): ref #7884 ref #7890 refactoring of name relations rendering a...
Andreas Kohlbecker
12:16 PM Revision 941a7fd0 (cdmlib): ref #7884 ref #7890 fixing LIE in name controllers regarding name rel...
Andreas Kohlbecker
11:47 AM Revision ece2b239 (taxeditor): ref #7887 Implement editing of DTOs in details view
Patrick Plitzner
11:32 AM task #7890 (New): Display of name relations in the data portal [master ticket]
There are multiple issues regarding the display of name relationships in the portal, this ticket encloses all of these. Andreas Kohlbecker
09:26 AM Revision 67f98be5 (taxeditor): ref #7887 Refactor isModifiable() property test
Patrick Plitzner
09:16 AM Revision 37c60b14 (taxeditor): ref #7887 Adapt postOperation in term editor
- do not set dirty flag
- expand parent node
Patrick Plitzner
08:59 AM Revision 5ee3fb57 (taxeditor): ref #7887 Refactor AbstractPostOperation.postExecute() to Object
Patrick Plitzner
08:58 AM Revision 75c87e6f (taxeditor): ref #7887 Refactor IPostOperationEnabled.postOperation() to Object
Patrick Plitzner
08:20 AM Revision fe08ca2d (taxeditor): ref #7887 Use vocabulary service for term creation directly
Patrick Plitzner
08:19 AM Revision 1ce2be53 (cdmlib): ref #7887 Add service method for term create
Patrick Plitzner
07:43 AM Revision 036767ba (taxeditor): Merge branch 'develop' into areaSelect
Patrick Plitzner
07:43 AM Revision 45f49bea (taxeditor): Switch gfbio term service to production server
Patrick Plitzner
07:35 AM Revision b405585f (taxeditor): ref #7887 Use service for term creation directly
Patrick Plitzner
07:33 AM Revision 6baf8c40 (cdmlib): ref #7887 Add service methods for term move and create
Patrick Plitzner

11/06/2018

05:41 PM Revision f87155dc (taxeditor): ref #7887 code cleanup
Patrick Plitzner
03:59 PM Revision d02a5189 (taxeditor): ref #7887 Adapt term creation handler/operation to DTO (experimental)
Patrick Plitzner
03:36 PM Revision 792a9d48 (cdm-dataportal): improving description regarding placeholder image
Andreas Kohlbecker
03:31 PM feature request #7888: TypeSpecimenEditor: Collection date should be timespan
please review Andreas Kohlbecker
03:31 PM feature request #7888 (Resolved): TypeSpecimenEditor: Collection date should be timespan
Applied in changeset commit:cdm-vaadin|6fa4d6045855f038548d75d54ad5776f770f1992. Andreas Kohlbecker
02:03 PM feature request #7888: TypeSpecimenEditor: Collection date should be timespan
In the GatheringEvent the gatheringDate setter and getters only operate with Partials but the gatheringDate value is... Andreas Kohlbecker
11:47 AM feature request #7888: TypeSpecimenEditor: Collection date should be timespan
Collection geo reference: uncertainty already solved Wolf-Henning Kusber
10:20 AM feature request #7888 (Resolved): TypeSpecimenEditor: Collection date should be timespan
There is an uncertainty in many old and new publications, for example only mm.yyyy or Autumn YY given, this can be ha... Wolf-Henning Kusber
03:30 PM Revision 6fa4d604 (cdm-vaadin): fix #7888 using EventBase.timespan for collection date
Andreas Kohlbecker
03:11 PM Revision 4b75986b (taxeditor): ref #7887 Change idInVocabulary to String
Patrick Plitzner
03:11 PM Revision ec95ad8e (cdmlib): ref #7887 Change idInVocabulary to String
Patrick Plitzner
02:40 PM Revision 3e72f342 (taxeditor): ref #7887 USe idInVocabulary and kindOfUuid of DTO
Patrick Plitzner
02:40 PM Revision ab4b0d27 (cdmlib): ref #7887 Add idInVocabulary and kindOfUuid to DTO + refactoring
Patrick Plitzner
01:30 PM bug #7889 (Closed): IE 11 cannot access apache on edit-comunity over https
The IE 11 which has a user agent string like
~~~
Mozilla/5.0 (Windows NT 6.3; Trident/7.0; rv:11.0) like Gecko
...
Andreas Kohlbecker
01:20 PM bug #7889 (Closed): IE 11 cannot access apache on edit-comunity over https
The following URLs can not be accessed with IE 11
* https://dev.e-taxonomy.eu/redmine/projects/edit/wiki
* https...
Andreas Kohlbecker
11:20 AM task #7846: PopupEditors show editor context information as 'breadcrumbs' in the header or toolbar.
please take a look Andreas Kohlbecker
11:12 AM task #7846 (Resolved): PopupEditors show editor context information as 'breadcrumbs' in the heade...
Applied in changeset commit:cdm-vaadin|ae69029fdb060770bd05a8c3cf578541bf01daf9. Andreas Kohlbecker
11:11 AM Revision ae69029f (cdm-vaadin): fix #7846 editor context information shown as breadcrumbs in the ...
Andreas Kohlbecker
11:10 AM Revision 5c609182 (cdm-vaadin): svg icons triangle-right-wide
Andreas Kohlbecker

11/05/2018

04:34 PM Revision 9f7d1f40 (taxeditor): ref #7887 Use DTOs in term editor (experimental)
Patrick Plitzner
04:29 PM Revision 7e89fd99 (cdmlib): ref #7887 Extract AbstractTermDto + add vocabulary dto service method
Patrick Plitzner
02:14 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
The general DB preferences are moved now to an extra page so they are not stored, if not opened.
Katja Luther
02:06 PM Revision b123c0b7 (taxeditor): ref #7849: move general db preferences to its own tab to avoid sav...
Katja Luther
02:04 PM Revision e7e84104 (taxeditor): update term cache when editing preferred terms in local preferences
Katja Luther
01:51 PM Revision ebd8810b (taxeditor): ref #7887 Fix potential NPE
Patrick Plitzner
01:51 PM Revision 8e85af8b (taxeditor): ref #7887 Add operations framework to term editor
Patrick Plitzner
01:49 PM feature request #7887 (Resolved): Use DTOs in term editor
Patrick Plitzner
01:40 PM feature request #7886: Divide local preferences to db dependend local preferences
The local preferences are stored with the instance name now. The setting of default values are moved to contextStart ... Katja Luther
01:35 PM feature request #7886 (Resolved): Divide local preferences to db dependend local preferences
the local preferences are set for a taxEditor instance which is critical if the different cdm instances have differen... Katja Luther
01:29 PM Revision c643a8b9 (cdmlib): ref #7875 javadoc
Patrick Plitzner
12:10 PM bug #7883 (Closed): IndexOutOfBoundsException in TermComboElement
this works as expected. Katja Luther
11:37 AM bug #7880 (In Progress): Implement centralized preference default loading strategy
The initialization of the preferences is already moved to contextStart in LifeCycleManager, so the cdm data store is ... Katja Luther
11:37 AM Revision 060c7e9f (taxeditor): db specific local preferences adaption
Katja Luther
11:36 AM Revision 44be1b98 (taxeditor): ref #7880: improve search configuration initialization
Katja Luther
11:20 AM Revision 7832ef53 (taxeditor): ref #7875 Performance optimization for term content provider
- Load complete term hierarchy
- always return true for vocabulary hasChildren()
Patrick Plitzner
10:47 AM Revision 4db1bbe6 (taxeditor): ref #7875 Refactor term label provider
- add Styler to label provider Patrick Plitzner
10:47 AM Revision 0ebf52c1 (cdmlib): ref #7875 Add service method to load complete term hierarchy
Patrick Plitzner
10:36 AM Revision 19f02eea (taxeditor): Merge branch 'develop' into areaSelect
Patrick Plitzner

11/02/2018

03:00 PM bug #7885: Lectotype in PhycoBank Portal
Combined seach name=Achnanthes gracillima plus Type=lectotype with no result (feature request)
Search=lectotype gi...
Wolf-Henning Kusber
12:06 PM bug #7885 (New): Lectotype in PhycoBank Portal
http://api.cybertaxonomy.org/phycobank/app/registration#!workingset/f40c2286-1ba2-40b4-8afb-bd383b9b5312
Production ...
Wolf-Henning Kusber
02:53 PM bug #7223: ReferenceEditor: disable fields depending on the Reference type
Reference Editor of Vaadin (2018-11-02) in square brackets: Differences in the TaxEditor
*Article*
Date published...
Wolf-Henning Kusber
01:55 PM Revision ceed9ceb (taxeditor): ref #7875 Fix initial selection of tree items
Patrick Plitzner
12:20 PM Revision 92f149d1 (taxeditor): Merge branch 'hotfix/5.4.2'
jenkins
12:00 PM bug #7884 (New): Replacement name not shown in Portal
http://api.cybertaxonomy.org/phycobank/app/registration#!workingset/144a44d0-730e-42b5-82b5-6d012db7d5d7
Production ...
Wolf-Henning Kusber
11:59 AM Revision dca5b257 (taxeditor): ref #7883 Revert visibility of class members + delete ambiguous me...
Patrick Plitzner
11:59 AM Revision 403ae331 (taxeditor): fix #7877 Fix refresh problem of wizard detail elements
Patrick Plitzner
11:59 AM Revision 5343149f (taxeditor): Updated version in pom / project files to taxeditor version : 5.4....
jenkins
11:54 AM Revision d037c408 (taxeditor): Merge branch 'hotfix/5.4.1'
jenkins
11:31 AM Revision a25f780a (taxeditor): Updated version in pom / project files to taxeditor version : 5.4....
jenkins
09:42 AM bug #7883 (Resolved): IndexOutOfBoundsException in TermComboElement
Patrick Plitzner
09:18 AM bug #7883: IndexOutOfBoundsException in TermComboElement
Fixed the problem by removing ambiguous method `setTerms()` which "overwrote" the actual filtering of the terms accor... Patrick Plitzner
08:56 AM bug #7883 (Closed): IndexOutOfBoundsException in TermComboElement
The combo element does not filter its elements according to the feature. It always shows all terms.
Example: Confi...
Patrick Plitzner
09:19 AM Revision 1610c4b8 (taxeditor): ref #7883 Revert visibility of class members + delete ambiguous me...
Patrick Plitzner
06:57 AM Revision 3c6e3fc6 (taxeditor): ref #7875 Adapt to TermDto based services
Patrick Plitzner
06:56 AM Revision 2d4cb2bf (cdmlib): ref #7875 Implement term service based on TermDto
Patrick Plitzner

10/31/2018

03:23 PM Revision 0ad58288 (taxeditor): enable multi-select for feature tree composite
Patrick Plitzner
10:38 AM Revision 54457f88 (taxeditor): ref #7806 Fix URL compilation for gfbio term search
Patrick Plitzner
09:34 AM feature request #7875 (Resolved): Add multiple area selection to descriptive data set editor
Patrick Plitzner

10/30/2018

10:42 PM bug #7882 (Duplicate): TeamOrPersonField: exception when selecting author
http://api.cybertaxonomy.org/phycobank/app/registration#!workingset/b52f4ef7-5743-44eb-84c9-0b06e67a256d
Produktions...
Andreas Kohlbecker
10:38 PM bug #7881 (New): reference selection combobox broken after error in ...
reported by henning:
17:44, der Fehler, den ich eben gemeldet habe (#7882) kann nicht ganz so dramatisch gewesen...
Andreas Kohlbecker
03:59 PM Revision cae7d9c1 (taxeditor): Adapt gfbio term search to use '*' wild card search
Patrick Plitzner
02:55 PM bug #7880 (In Progress): Implement centralized preference default loading strategy
Some preferences are loaded at Taxeditor startup before any connection to a CDM data source was made. Since some pref... Patrick Plitzner
11:52 AM bug #7878: Edit CollectionCode not saved
The type designation editor is not refreshing the cache with the updated collection entity. Andreas Kohlbecker
11:22 AM bug #7879 (New): Book CacheStrategy does not show 'place published', 'publisher', 'editor'
the same problem seems to exist with `Print series`
----
Originally reported by Henning:
Hallo Andreas,
i...
Andreas Kohlbecker

10/29/2018

07:54 PM Revision 9df52c92 (taxeditor): ref #7875 Adapt to UuidAndTitleCache based services
Patrick Plitzner
04:31 PM feature request #7408: [E+M] Support for preferred common names in data portal
~~~
SELECT DISTINCT tb.id, tb.uuid, tb.titleCache, m.markerType_id
FROM DescriptionElementBase deb INNER JOIN Descr...
Andreas Müller
04:24 PM feature request #7408: [E+M] Support for preferred common names in data portal
Campanula trachelium (http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/taxon/ec389413-4102-43bc-9... Andreas Müller
11:50 AM feature request #7408 (Feedback): [E+M] Support for preferred common names in data portal
Please provide an example dataset. Andreas Kohlbecker
04:08 PM bug #7877: form elements disappear reference dialog after changing the reference type
Other work around: use "New" in bulk editor. Type change in details view works. Andreas Müller
01:14 PM bug #7877: form elements disappear reference dialog after changing the reference type
This was a refresh problem that was introduced with the performance optimization for this release.
Workaround unti...
Patrick Plitzner
01:12 PM bug #7877 (Resolved): form elements disappear reference dialog after changing the reference type
Applied in changeset commit:taxeditor|d728f00fbfb5b64be4c1f1fc3c6bd4d1162f42c7. Patrick Plitzner
12:54 PM bug #7877: form elements disappear reference dialog after changing the reference type
Patrick meint:
> Das ist ein Refresh-Problem
> einmal am Dialogfenster zupfen und es ist alles da
> zupfen = resize
Andreas Kohlbecker
11:49 AM bug #7877 (Resolved): form elements disappear reference dialog after changing the reference type
TaxEditor 5.4.0
Tested with PhycoBank
File, New, Reference opens Reference Editor with default value "generic".
Se...
Wolf-Henning Kusber
03:59 PM Revision ce2334e5 (taxeditor): ref #7875 Use UuidAndTitleCache based services for area selection ...
Patrick Plitzner
03:57 PM Revision 74bdd593 (cdmlib): ref #7875 Implement term service based on UuidAndTitleCache
Patrick Plitzner
02:04 PM bug #7878 (Resolved): Edit CollectionCode not saved
Vaadin UI, production system:
Working Set http://api.cybertaxonomy.org/phycobank/app/registration#!workingset/cfdf0...
Wolf-Henning Kusber
01:12 PM Revision d728f00f (taxeditor): fix #7877 Fix refresh problem of wizard detail elements
Patrick Plitzner
01:10 PM Revision 065e4df4 (taxeditor): Fix possible NPE
Patrick Plitzner
10:56 AM Revision 790e1587 (taxeditor): ref #7875 Fix tree checkbox behavior + extract dialog class
Patrick Plitzner
10:28 AM feature request #7876 (New): Vaadin UI status update
Thema: Update bei Status-Änderung, betrifft Produktionssystem:
Als Curator muss jeder Eintrag jeweils von Preparatio...
Wolf-Henning Kusber

10/27/2018

12:04 PM bug #7872: use firePropertyChange only if the value has changed
Andreas Kohlbecker wrote:
> great and agreed!
>
> one hit before closing this as "worksforme", just in case you m...
Andreas Müller

10/26/2018

06:24 PM bug #7870 (Closed): RegistrationWorkingsetEditor: Intenral error on clicking "new name"
I added to modifications
* adding the WindowErrorHandler also to the VaadinSession
* clearing the session to wipe...
Andreas Kohlbecker
01:45 PM bug #7870: RegistrationWorkingsetEditor: Intenral error on clicking "new name"
above sub issue copied to #7874 Andreas Kohlbecker
01:42 PM bug #7870: RegistrationWorkingsetEditor: Intenral error on clicking "new name"
AM:
ganz so kritisch ist es glaube ich nicht. Letztlich muss man nur den cache updaten mit dem Cacheupdater. Aller...
Andreas Müller
01:29 PM bug #7870: RegistrationWorkingsetEditor: Intenral error on clicking "new name"
The initial problem is cause by the `protectedNomenclaturalTitleCache` flag of the Team being set to `false`. When bi... Andreas Kohlbecker
09:01 AM bug #7870 (Closed): RegistrationWorkingsetEditor: Intenral error on clicking "new name"
Encrypted by a verified device
14:04 als submitter eine neue Referenz angelegt (StartRegistrationView), dann new "C...
Andreas Kohlbecker
06:22 PM Revision 1bc25606 (cdm-vaadin): ref #7870 clearing the session to wipe out any left overs from pr...
Andreas Kohlbecker
06:21 PM Revision 4329130b (cdm-vaadin): ref #7870 adding the WindowErrorHandler also to the VaadinSession...
Andreas Kohlbecker
06:16 PM bug #7872 (Worksforme): use firePropertyChange only if the value has changed
great and agreed!
one hit before closing this as "worksforme", just in case you missed this out so far:
Since j...
Andreas Kohlbecker
04:03 PM bug #7872 (Resolved): use firePropertyChange only if the value has changed
If you follow the firePropertyChange call you come to PropertyChangeSupport
~~~ java
public void fireProperty...
Andreas Müller
12:19 PM bug #7872 (Worksforme): use firePropertyChange only if the value has changed
this is an example from `Team` where a `PropertyChangeEvent` is fired even if `this.nomenclaturalTitle.equals(nomenc... Andreas Kohlbecker
05:42 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
please review Andreas Kohlbecker
05:40 PM bug #7874 (Resolved): TeamOrPersonBase entity can become unusable due to replacement of the title...
Applied in changeset commit:cdmlib|cfcf723b6485a38d3b39e4d53696036d212d6d6c. Andreas Kohlbecker
05:39 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
Running the CacheUpdater should fix the issue. But the method `IdentifiableServiceBase.updateTitleCacheForSingleEntit... Andreas Kohlbecker
04:07 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
Andreas Kohlbecker wrote:
> The Problem comes from the Person named "A.M. Monroe" which has been entered in the Taxe...
Andreas Müller
02:27 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
The Problem comes from the Person named "A.M. Monroe" which has been entered in the Taxeditor by Henning on 2018-04-2... Andreas Kohlbecker
01:45 PM bug #7874: TeamOrPersonBase entity can become unusable due to replacement of the title caches on ...
AM:
ganz so kritisch ist es glaube ich nicht. Letztlich muss man nur den cache updaten mit dem Cacheupdater. Aller...
Andreas Kohlbecker
01:44 PM bug #7874 (Resolved): TeamOrPersonBase entity can become unusable due to replacement of the title...
This issue is quite good explainable by the case examined in #7870#note-1 :
The initial problem is cause by the `p...
Andreas Kohlbecker
05:40 PM Revision cfcf723b (cdmlib): fix #7874 updating also the nomenclaturalTitle in updateTitleCacheFor...
Andreas Kohlbecker
04:39 PM feature request #7640: Update ISO country names where necessary
Musste heute im PhycoBank Production-System einen Country-Eintrag wieder rausnehmen. Ich wollte den Eintrag "Romania"... Wolf-Henning Kusber
04:08 PM Revision 4e514541 (taxeditor): ref #7875 first implementation of multiple area select (experimental)
Patrick Plitzner
04:06 PM feature request #7875 (Resolved): Add multiple area selection to descriptive data set editor
Patrick Plitzner
01:30 PM Revision 08bcc80a (taxeditor): Increase gfbio term search timeout
Patrick Plitzner
01:27 PM feature request #7873 (Resolved): Implement copy&paste for feature nodes in feature tree editor
Applied in changeset commit:taxeditor|f3065796575239dbdc4afab4207bf70d87d72536. Patrick Plitzner
01:26 PM feature request #7873 (Resolved): Implement copy&paste for feature nodes in feature tree editor
Patrick Plitzner
01:26 PM Revision f3065796 (taxeditor): fix #7873 Implement copy&paste for feature nodes in feature tree e...
Patrick Plitzner
12:24 PM task #7866: Phycobank UI further label improvemenst
wording also acceptec by Regine Wolf-Henning Kusber
09:30 AM Revision 7ec143e3 (taxeditor): ref #7715 re-enable source section in supplemental view for descri...
Patrick Plitzner
09:24 AM feature request #7871 (Resolved): Open character matrix as singleton
Applied in changeset commit:taxeditor|fcb2dae63a03e03ad65a4b0f2f564a5e002c0582. Patrick Plitzner
09:24 AM feature request #7871 (Resolved): Open character matrix as singleton
The character matrix should only be opened once for a descriptive data set Patrick Plitzner
09:24 AM Revision fcb2dae6 (taxeditor): fix #7871 Open character matrix as singleton
Patrick Plitzner
09:23 AM feature request #7869 (Resolved): Run gfbio term service requests as background tasks
Patrick Plitzner
08:43 AM feature request #7869 (Resolved): Run gfbio term service requests as background tasks
Patrick Plitzner
09:20 AM feature request #7868 (Resolved): Allow creating a new vocabulary in vocabulary selection dialog
Applied in changeset commit:taxeditor|aa95aad0606b24de8df073a2f2614e86ab91718b. Patrick Plitzner
08:10 AM feature request #7868 (Resolved): Allow creating a new vocabulary in vocabulary selection dialog
Patrick Plitzner
09:17 AM Revision f3077849 (taxeditor): ref #7869 Run request for availabel ontologies in background task
Patrick Plitzner
08:47 AM Revision fb259956 (taxeditor): ref #7869 Run ontology search in background task
Patrick Plitzner
08:25 AM Revision aa95aad0 (taxeditor): fix #7868 Allow creating a new vocabulary in vocabulary selection ...
Patrick Plitzner
08:24 AM Revision c2527228 (taxeditor): ref #7806 Do not set dirty flag when voc selection was canceled
Patrick Plitzner
08:15 AM Revision 72774356 (taxeditor): ref #7806 Add warning for long running searches
Patrick Plitzner
07:58 AM Revision 05eb2382 (taxeditor): code refactoring + typo
Patrick Plitzner

10/25/2018

07:14 PM bug #7857: Update name relationship type representations and symmetrie
~~~ sql
UPDATE DefinedTermBase
SET symmetrical=0
WHERE uuid IN ('049c6358-1094-4765-9fae-c9972a0e7780', '6e23ad4...
Andreas Müller
07:11 PM feature request #7434: while importing sequences it should be possible to download fasta file
Can you please add a category? Andreas Müller
06:38 PM bug #7867 (Resolved): FieldGroup$BindException: The given field is not part of this FieldBinder i...
this issue is neither reproducible nor comprehensible, I tries to change the code in a way to avoid this issue in fut... Andreas Kohlbecker
06:00 PM bug #7867 (Resolved): FieldGroup$BindException: The given field is not part of this FieldBinder i...
[reported by henning]
Testsystem:
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/537f...
Andreas Kohlbecker
06:30 PM Revision dee4cf65 (cdm-vaadin): ref #7867 attempting to avoid FieldGroup in TeamOrPersonField wit...
Andreas Kohlbecker
03:32 PM Revision 6537364c (taxeditor): Merge branch 'develop' into wordExport
Patrick Plitzner
03:32 PM Revision 892c023e (taxeditor): ref #7844 Show fail text when connection times out
Patrick Plitzner
03:32 PM Revision bcb47e99 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
03:01 PM Revision c6fd42f2 (cdm-server): Merge branch 'release/5.4.0' into develop
jenkins
03:01 PM Revision 2ce817a4 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
03:00 PM Revision 5bd8483d (cdm-server): updating poms for branch'release/5.4.0' with non-snapshot versions
jenkins
03:00 PM Revision 858166f7 (cdm-webapp): Merge branch 'release/5.4.0' into develop
jenkins
03:00 PM Revision 59e5a93e (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
02:59 PM Revision b9970363 (cdm-webapp): updating poms for branch'release/5.4.0' with non-snapshot versions
jenkins
02:59 PM Revision 8361e62c (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.4.0
jenkins
02:48 PM Revision 5c0bc2b3 (cdm-dataportal): Merge branch 'release/5.4.0' into develop
jenkins
02:47 PM Revision d2fa3541 (cdm-dataportal): updating poms for branch'release/5.4.0' with non-snapshot ver...
jenkins
02:47 PM Revision 9d38710f (cdm-dataportal): release-preparation: production level css
jenkins
02:47 PM Revision 62c4807f (cdm-vaadin): Merge branch 'release/5.4.0' into develop
jenkins
02:46 PM Revision 3b4f7be8 (taxeditor): Merge branch 'release/5.4.0' into develop
jenkins
02:46 PM Revision 5f034f9d (taxeditor): Merge branch 'release/5.4.0'
jenkins
02:44 PM Revision 3b7e9a8a (cdm-vaadin): updating poms for branch'release/5.4.0' with non-snapshot versions
jenkins
02:43 PM Revision 00cc67ea (cdm-vaadin): jenkins bumping cdmlib.version to 5.4.0
jenkins
02:43 PM Revision 9b0b5ecb (cdmlib): Updating develop poms back to pre merge state
jenkins
02:43 PM Revision 11a45750 (cdmlib): Merge branch 'master' into develop
jenkins
02:43 PM Revision ac7c8a7c (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
02:43 PM Revision 1d1f800b (cdmlib): Merge branch 'release/5.4.0'
jenkins
02:26 PM Revision 42b6eb5f (cdmlib): updating poms for branch'release/5.4.0' with non-snapshot versions
jenkins
02:09 PM Revision 44ad5ba2 (taxeditor): Updated version in pom / project files to taxeditor version : 5.5....
jenkins
02:08 PM Revision 0a065607 (taxeditor): Updated version in pom / project files to taxeditor version : 5.4....
jenkins
02:08 PM Revision 4143b04a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.4.0-SN...
jenkins
02:08 PM Revision 841f67ba (cdm-webapp): updating poms for 5.5.0-SNAPSHOT development
jenkins
02:08 PM Revision 666e6b13 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.5.0-SN...
jenkins
02:06 PM Revision 13705783 (cdm-vaadin): jenkins bumping cdmlib.version to 5.4.0-SNAPSHOT
jenkins
02:06 PM Revision bb2324f9 (cdm-vaadin): updating poms for 5.5.0-SNAPSHOT development
jenkins
02:06 PM Revision 1f3dc75d (cdm-vaadin): jenkins bumping cdmlib.version to 5.5.0-SNAPSHOT
jenkins
02:05 PM Revision ea5a834d (cdm-server): updating poms for 5.5.0-SNAPSHOT development
jenkins
02:05 PM Revision 4ceb0a6f (cdm-dataportal): updating poms for 5.5.0-SNAPSHOT development
jenkins
02:03 PM Revision 22c932b7 (cdmlib): updating poms for 5.5.0-SNAPSHOT development
jenkins
01:57 PM Revision d91c1723 (taxeditor): Increase gfbio term search timeout
Patrick Plitzner
01:35 PM Revision 1e0fedbd (taxeditor): Change order of restart menu
Patrick Plitzner
01:33 PM Revision 6cac39d7 (taxeditor): Remove Core Expression for restart menu
Patrick Plitzner
01:30 PM Revision 5a4c3aac (taxeditor): Add "Restart" to General menu
- + i18n Patrick Plitzner
01:23 PM task #7355 (Closed): TaxonNamePopupEditor: newly created nomenclatural reference should be select...
works Andreas Kohlbecker
01:17 PM bug #7047 (Closed): Vaadin UI and View scope beans are not always destroyed correctly
this has been solved by the changes made for #7036 Andreas Kohlbecker
01:12 PM Revision 3a7c1c08 (taxeditor): Hide "Connect" menu when connected to a data source
Patrick Plitzner
01:12 PM Revision 2525cd92 (taxeditor): Increase gfbio term search timeout
Patrick Plitzner
01:09 PM bug #7222 (Closed): Phycobank UI improve labels
Wolf-Henning Kusber wrote:
> Offener ToDo-Text nach Diskussion mit Nick Turland (2018-10-25)
>
> Register a new n...
Andreas Kohlbecker
11:24 AM bug #7222: Phycobank UI improve labels
Offener ToDo-Text nach Diskussion mit Nick Turland (2018-10-25)
Register a new name or a new type designation.
Wolf-Henning Kusber
01:08 PM task #7866 (Feedback): Phycobank UI further label improvemenst
**TODO**
* RegistrationDashboard: "Register a new name or a new type designation." suggested by Henning and Nick T...
Andreas Kohlbecker
01:05 PM Revision 8d788122 (cdm-vaadin): ref #7222 changing new registratino label to latest suggestion
Andreas Kohlbecker
12:53 PM Revision 77daaad4 (taxeditor): Disable preferences menu when not connected to a data source
Patrick Plitzner
12:45 PM Revision 2671a71c (taxeditor): Disabel public flag checkbox in node wizard in edit mode
Patrick Plitzner
12:33 PM bug #6287 (In Progress): Rolling cdmserver.log file only contains entries from startup phase
Andreas Kohlbecker
12:32 PM Revision 53894154 (taxeditor): ref #4611 Add missing translations
Patrick Plitzner
11:28 AM Revision 5e9919cc (taxongraph-view): adding node and edges in cytoscape.js data model for testing
Andreas Kohlbecker
11:09 AM bug #7855 (Closed): PersonField modifies the nomenclaturalTitle forcing users to have the UPDATE ...
Andreas Kohlbecker
11:08 AM bug #7855 (Resolved): PersonField modifies the nomenclaturalTitle forcing users to have the UPDAT...
Applied in changeset commit:cdm-vaadin|db262dfa73bbc4f60e98b397b7986f05eefa6de6. Andreas Kohlbecker
11:03 AM bug #7855: PersonField modifies the nomenclaturalTitle forcing users to have the UPDATE permissio...
my last nights impression on the cause of this problem was misled and thus not correct. The real cause is in the `Per... Andreas Kohlbecker
11:08 AM Revision db262dfa (cdm-vaadin): fix #7855 preventing nomenclaturalTitle from being changed in Per...
Andreas Kohlbecker
10:55 AM feature request #7775 (Closed): Factual Data label issue
remaining tasks have been moved to #7865 Patrick Plitzner
10:55 AM feature request #7865 (New): Remaining factual data view label issues
Copied from #7775:
* If a source is added in the details view, and the titleCache is not protected, it should be g...
Patrick Plitzner
10:40 AM Revision bf0c676a (taxeditor): ref #7849 code refactoring
Patrick Plitzner
10:36 AM bug #7766 (Resolved): Remaining issues for using relationship DTO webservice in portal
Andreas Müller
10:23 AM feature request #7283 (Feedback): Improvements for alternative identifier search
Do I understand correctly that this functionality is only available for certain references searches? I tested for sea... Andreas Müller
10:21 AM feature request #7283: Improvements for alternative identifier search
I still fixed a new NPE: commit aaee4922 Andreas Müller
10:18 AM Revision cb56c869 (cdmlib): cleanup
Andreas Müller
10:17 AM Revision aaee4922 (cdmlib): ref #7283 fix NPE in AlternativeIdentifier constructor if no type is ...
Andreas Müller
09:43 AM Revision fb3b51ea (taxeditor): local preferences: if no db specific preference is available use t...
Katja Luther
09:34 AM feature request #7864: Use short forms in cache strategy for DescriptionBase
upps, just realized this is already implemented.
Only using the short form is still missing. Therefor relabel thi...
Andreas Müller
08:53 AM feature request #7864 (New): Use short forms in cache strategy for DescriptionBase
for how to implement see #7775.
something like "Factual Data from [source] for [taxon/specimen/name].
Use shor...
Andreas Müller
08:48 AM Revision 69e82edd (taxeditor): local preferences database specific
Katja Luther
08:03 AM feature request #7473: Replace PropertyChangeEvent architecture with e4 event bus in details view
subtask: Update changed source in description label (#7775#note-11) Patrick Plitzner
07:59 AM Revision f3df0663 (taxeditor): ref #7775 Select newly created description in factual data view
Patrick Plitzner
07:48 AM Revision 3dba4bc3 (taxeditor): Remove "Aggregate Taxon descriptions" menu from taxon navigator
Patrick Plitzner

10/24/2018

11:04 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Patrick Plitzner wrote:
> "Änderungen an ABCD Import werden nicht gespeichert, außer allowOverride, aber auch das wi...
Katja Luther
10:33 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> If the NomenclaturalCode is once set it can not be removed anymore in the DB Pref display ev...
Katja Luther
03:28 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
If the NomenclaturalCode is once set it can not be removed anymore in the DB Pref display even if the Preferences is ... Andreas Müller
02:56 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
"Änderungen an ABCD Import werden nicht gespeichert, außer allowOverride, aber auch das wird nicht richtig reloaded b... Patrick Plitzner
11:19 AM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Das Problem ist aber eher, dass zuviel gespeichert wird.
Wenn man nur den DB Preferences Dialog öffnet und wieder sc...
Andreas Müller
11:02 PM Revision 923fbf1e (taxeditor): ref #7849: save ABCD configuration with correct preference subject
Katja Luther
10:30 PM Revision 8559a792 (taxeditor): check for the right preference in checklistEditor Handler
Katja Luther
08:59 PM bug #7855: PersonField modifies the nomenclaturalTitle forcing users to have the UPDATE permissio...
Why should changes in type designation update the cache? Does it really update, I mean **change** the value or does i... Andreas Müller
07:51 PM bug #7855: PersonField modifies the nomenclaturalTitle forcing users to have the UPDATE permissio...
I will adapt the subject of this issue since it is not adequately describing the root of the problem.
I feel like ...
Andreas Kohlbecker
07:43 PM bug #7855: PersonField modifies the nomenclaturalTitle forcing users to have the UPDATE permissio...
the reason for this is that the cache strategy is modifying the `nomenclaturalTitle`
~~~
modified property found...
Andreas Kohlbecker
06:43 PM bug #7850: Further problems with term editor
Maybe one problem is the order index. After moving the area gets the highest order index though it is placed as child... Andreas Müller
06:37 PM bug #7850: Further problems with term editor
The problem always occurs during the second move. Moving first time works correctly. Andreas Müller
06:32 PM bug #7850: Further problems with term editor
Next time when opening term editor Belgium was completely gone, though in the DB everything was ok (vocabulary, paren... Andreas Müller
06:19 PM bug #7850: Further problems with term editor
still not yet fully fixed
![](picture357-1.png)
Andreas Müller
03:12 PM bug #7850 (Resolved): Further problems with term editor
Patrick Plitzner
06:22 PM bug #7814 (Closed): Section in Name and section in Basionym, usability
the status "worksforme" is applied to bug reports which can not be reproduced. In this context it means that there is... Andreas Kohlbecker
05:27 PM bug #7814 (Worksforme): Section in Name and section in Basionym, usability
Test 2: Neuer Name, neuer Autor in neuer Referenz, mit neuem Journal, ohne Fehler.
Aber: ich habe noch nicht alle ...
Wolf-Henning Kusber
05:01 PM bug #7814: Section in Name and section in Basionym, usability
Test: New reference, new name, new basionym, new section in new reference - without error Wolf-Henning Kusber
05:52 PM Revision 986b34c8 (taxeditor): ref #7849 Temporarily removed general DB preferences
Patrick Plitzner
05:24 PM task #7785: CdmUserHelper caches permission information
Sorry, currently I don't have time for review. But if it works for you review is not critical I think. Andreas Müller
05:13 PM Revision bdab9dc8 (taxeditor): shorten parent child rel ref label
Andreas Müller
05:10 PM feature request #7793: Master ticket for E+M editor issues
>DB preference to make all functionality related to multiple classification and reuse taxon support unavailable (exce... Andreas Müller
05:08 PM feature request #7793: Master ticket for E+M editor issues
>DB preference to make all functionality related to multiple classification and reuse taxon support unavailable
We...
Andreas Müller
04:49 PM feature request #7793: Master ticket for E+M editor issues
Andreas Müller wrote:
> >add menu items for setting of excluded or unplaced flag
>
> it seems to work with local ...
Andreas Müller
04:24 PM feature request #7793: Master ticket for E+M editor issues
>add menu items for setting of excluded or unplaced flag
it seems to work with local settings only, if one changes...
Andreas Müller
04:09 PM feature request #7793 (Feedback): Master ticket for E+M editor issues
Change "Use checklist perspective" seems to change local settings. Once this is set to true it was impossible for me ... Andreas Müller
03:27 PM feature request #7695 (Feedback): web service providing compact TypeDesignation representation fo...
... #7863
the last open issue regarding this is mentioned in #7695#note-4
who needs this and will continue the ...
Andreas Kohlbecker
03:20 PM feature request #7695: web service providing compact TypeDesignation representation for homotypic...
currently we don't have a web service controller with `/homotypicGroup/` as base path. This would be a requirement fo... Andreas Kohlbecker
03:15 PM feature request #7695: web service providing compact TypeDesignation representation for homotypic...
Andreas Müller wrote:
> I wonder if we should really require a single name uuid as obligatory input parameter. The s...
Andreas Kohlbecker
03:22 PM feature request #7863 (New): /homotypicGroup/{uuid}/homotypicGroupTypeDesignationsDTO webservice ...
for details see #7695#note-9 Andreas Kohlbecker
03:20 PM Revision 39a72cef (taxeditor): ref #7849 Always show override checkbox in name details admin prefs
Patrick Plitzner
03:12 PM Revision 89cdb669 (taxeditor): ref #7850 Refresh vocabulary when moving terms
Patrick Plitzner
03:10 PM feature request #7648 (Resolved): Create taxonrelation to genus or species when subordinate names...
ok, all open tasks are copied to new issues: #7860, #7861
the reason why I passed this to you is written in comme...
Andreas Kohlbecker
03:06 PM task #7862 (New): improve documentation on TaxonGraphHibernateListener and related classes
the documentation on the TaxonGraphHibernateListener is still rudimentary and need to be improved
copied from #764...
Andreas Kohlbecker
03:03 PM feature request #7861 (New): TaxonGraphHibernateListener: inject the ITaxonGraphDao into TaxonGra...
we could think about refactoring the `TaxonGraphHibernateListener` a bit:
Andreas Müller suggested to inject the `...
Andreas Kohlbecker
02:54 PM bug #7036 (Closed): correctly release vaadin view resources when the browser windows has been closed
now all spring beans like RegistrationToolbar, RegistrationUI, RegistrationWorkingsetPresenter, NavigationManagerBean... Andreas Kohlbecker
02:53 PM bug #7036 (Resolved): correctly release vaadin view resources when the browser windows has been c...
Applied in changeset commit:cdm-vaadin|b14494a9c3be6a70f64c4560209ba8d406eb635f. Andreas Kohlbecker
02:53 PM Revision b14494a9 (cdm-vaadin): fix #7036 making sure all spring beans are disposed when the vaad...
- RegistrationToolbar, RegistrationUI, RegistrationWorkingsetPresenter, NavigationManagerBean as DisposableBean
- ...
Andreas Kohlbecker
02:52 PM Revision e974354a (taxeditor): ref #7849 Fix potential NPE
Patrick Plitzner
02:31 PM bug #7236: Make available distribution status a database preference for TaxEditor distribution ed...
It looks like the selected status are also written to the local preferences. This is very dangerous because
(1) c...
Andreas Müller
01:58 PM bug #7236 (Feedback): Make available distribution status a database preference for TaxEditor dist...
Generally it works.
Only open issue: if you change the status list you have to completely close and open the TaxE...
Andreas Müller
02:27 PM Revision 0c7f7de7 (taxeditor): ref #4611 i18n for admin preferences
Patrick Plitzner
02:14 PM feature request #7860 (New): [Master] Remaining E+M editor issues
this is a follow up ticket for #7793 after release 5.4 for all open issues and some new issues.
Detailsview
* M...
Andreas Müller
02:05 PM Revision cdad4890 (taxeditor): ref #7849 Set allowOverride to true
Patrick Plitzner
01:31 PM Revision 1af15fb7 (cdmlib): #7859 reverted max size for Pref.value. Test failed, need to check wh...
Andreas Müller
01:16 PM Revision 5e3a2c94 (taxeditor): ref #7849 Set override flag to true if no pref was found
Patrick Plitzner
01:14 PM Revision d3ec20ed (taxeditor): ref #7849 String externalization and label adjustment
Patrick Plitzner
12:58 PM Revision 325c8ebc (cdmlib): #7859 Changed length to 2000. Still need update script
Andreas Müller
12:57 PM bug #7859 (New): Increase size of CdmPreference.value
Storing longer term lists (as UUID lists) currently leads to exceptions. Andreas Müller
12:55 PM Revision 532a02bb (cdm-vaadin): ref #7858 removing delete button from name editor to avoid proble...
Andreas Kohlbecker
12:54 PM Revision a7058992 (cdmlib): cleanup
Andreas Müller
12:48 PM bug #7858 (New): names used in the TaxonGraph can not be deleted if the user has no DELETE permis...
Andreas Kohlbecker
12:42 PM bug #7845 (Resolved): NamePopupEditor new Genus button should clear the genus name field in the n...
the uninomial field for genus and higher ranks can be edited again. Andreas Kohlbecker
12:35 PM Revision a9316ea5 (taxeditor): code cleaning
Patrick Plitzner
12:33 PM Revision 959b2c17 (cdm-vaadin): ref #7830 ref #7814 fixing WeaklyRelatedEntityCombobox reset to t...
Andreas Kohlbecker
12:05 PM Revision 9e4eb709 (taxeditor): ref #7844 Extend timeout to 7000ms
Patrick Plitzner
12:05 PM Revision 41058237 (taxeditor): ref #7844 Enhance error message when connection times out
Patrick Plitzner
11:25 AM Revision f13fa7a2 (taxeditor): check if vocabulary preference page was opened
Katja Luther
11:09 AM bug #7222: Phycobank UI improve labels
#7222#note-15 in Diskussion (2018-10-24) Wolf-Henning Kusber
10:26 AM bug #7827 (Closed): LazyInitializationException when saving term editor (named areas)
Patrick Plitzner
10:08 AM Revision dba801a9 (cdmlib): #7849 set allow override to true as default in cdmlib CdmPreference
Andreas Müller
09:48 AM Revision 446a945a (taxeditor): ref #7775 Change menu order
Patrick Plitzner
09:28 AM bug #7848 (Closed): Exceptions for some cdm preference pages
Exception does not show up anymore. As it only appeared in 5.4 nightly I removed target version. Andreas Müller
09:20 AM feature request #7235 (Resolved): Make available area vocabularies a database preference for TaxE...
Applied in changeset commit:taxeditor|d4db40709483dba7f8451f64de1db944d0ba694e. Patrick Plitzner
09:20 AM Revision d4db4070 (taxeditor): fix #7235 Fix "allowOverride" flag for common name areas DB prefs
Patrick Plitzner
08:54 AM feature request #7809: Improve namerelationship handling in editor
Andreas Müller wrote:
> Works fine and can be closed. Only somehow open issue is that "symmetrical" relationships ar...
Katja Luther
07:57 AM Revision f662104a (taxeditor): ref #7810 Fix setting of specimen admin prefs
Patrick Plitzner
07:56 AM Revision b6c6423a (taxeditor): Comment unused method
Patrick Plitzner
07:12 AM bug #7844: LoginDialog freezes Taxeditor if no connection can be established
Andreas Müller wrote:
> This has been reverted due to failing test. Or did we only ignore the test?
>
> How shoul...
Patrick Plitzner
06:55 AM Revision c4c36f8e (taxeditor): ref #7810 Fix creation of local specimen preferences
Patrick Plitzner

10/23/2018

12:55 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Bulk Editor-"ShowFieldUnits in Specimen Editor (list) should be disabled.
However, we need move this to an other pag...
Andreas Müller
12:52 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
In lokal preferences the "Specimens and FieldUnits" page is now always empty, even if showSpecimen = true. What was t... Andreas Müller
12:49 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Also it is not yet possible to select "allow override" if specimen are switched off in DB preferences. Andreas Müller
12:45 AM feature request #7810 (Feedback): DB preference to make all Specimen functionality/menu items inv...
Also we may want to disable the "Derivatives" perspective. Andreas Müller
12:43 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
In Facts View we could remove all Features that need specimen support, or at least remove support for IndividualsAsso... Andreas Müller
12:38 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
In name details view for all names of rank species and below we could remove the type designations section Andreas Müller
12:37 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
In preferences we could disable the Taxonomic-TypeDeignations(Specimen) part. Andreas Müller
12:34 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
TermEditor term types DnaMarker, DeterminationModifier, KindOfUnit can also be disabled (maybe we can implement this ... Andreas Müller
12:12 AM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Specimen imports are still shown.
![](picture585-1.png )
Note: this might be easier to handle if we group impor...
Andreas Müller
11:29 PM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
the check for the existence of the preference is needed to check whether the page was opened or not, because the pref... Katja Luther
04:08 PM feature request #7810 (Resolved): DB preference to make all Specimen functionality/menu items inv...
Applied in changeset commit:taxeditor|53d9aad00561967e0fbb8e3a87e5c0b2e57251e7. Patrick Plitzner
03:24 PM feature request #7810 (Feedback): DB preference to make all Specimen functionality/menu items inv...
Andreas Müller
03:24 PM feature request #7810: DB preference to make all Specimen functionality/menu items invisible
Currentyl can't test because preference can not be stored. See also #7849 Andreas Müller
10:46 AM feature request #7810 (Resolved): DB preference to make all Specimen functionality/menu items inv...
I think this was mostly fixed in the master ticket. Put to resolved to do the review if something is still missing. I... Andreas Müller
12:00 AM feature request #7809: Improve namerelationship handling in editor
I will keep this assigned to me to remember to update the symmetric values on our server DBs already and to update re... Andreas Müller
11:58 PM feature request #7809 (Feedback): Improve namerelationship handling in editor
Works fine and can be closed. Only somehow open issue is that "symmetrical" relationships are now shown twice. In gen... Andreas Müller
08:59 PM feature request #7809 (Resolved): Improve namerelationship handling in editor
this should be fixed now Katja Luther
11:36 PM bug #7857: Update name relationship type representations and symmetrie
also change "is new combination blocked by" to "has blocking name" Andreas Müller
11:30 PM bug #7857 (New): Update name relationship type representations and symmetrie
since #7809 it is now possible to store name relationships in both directions.
Many of the direct representations ...
Andreas Müller
11:10 PM Revision 4e6f2196 (taxeditor): fix save of db preferences not available in db before
Katja Luther
07:36 PM bug #7844 (Feedback): LoginDialog freezes Taxeditor if no connection can be established
This has been reverted due to failing test. Or did we only ignore the test?
How should I test it if feature is sti...
Andreas Müller
01:43 PM bug #7844 (Resolved): LoginDialog freezes Taxeditor if no connection can be established
Applied in changeset commit:taxeditor|a9c45e1e62a5e2b4af8107dba4cb1a27f9f3c076. Patrick Plitzner
12:47 PM bug #7844 (Feedback): LoginDialog freezes Taxeditor if no connection can be established
A timeout needs to be implemented Patrick Plitzner
07:34 PM feature request #7775: Factual Data label issue
final task: we should allow to set titleCache to protected, otherwise it is not possible to use user defined labels f... Andreas Müller
07:33 PM feature request #7775: Factual Data label issue
Patrick Plitzner wrote:
> The label in the factual data view is now updated when changing sources. But still it is n...
Andreas Müller
07:32 PM feature request #7775: Factual Data label issue
After creating Description it would be nice if the description gets the focus. This way you can also see the attached... Andreas Müller
07:27 PM feature request #7775: Factual Data label issue
The "New Factual Data Set with source" menu is now above the simple "New Factual Data Set" menu, but should be below. Andreas Müller
07:24 PM Revision abfc6b6e (taxeditor): ref #7063 change labels for dialog help
Andreas Müller
07:18 PM bug #7630 (Closed): blocking registration relations get lost after saving adding a typedesignatio...
solved Wolf-Henning Kusber
02:48 PM bug #7630: blocking registration relations get lost after saving adding a typedesignation to a ne...
this should be fully solved now
Andreas Kohlbecker
07:05 PM bug #7845 (In Progress): NamePopupEditor new Genus button should clear the genus name field in th...
The new popup form shows the preselected rank (species) and selecting Uninominal there is the dropdown OR the new but... Wolf-Henning Kusber
04:33 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
solved, please review Andreas Kohlbecker
04:32 PM bug #7845 (Resolved): NamePopupEditor new Genus button should clear the genus name field in the n...
Applied in changeset commit:cdm-vaadin|3d093bed95b143473aad52db91c4954bf4398739. Andreas Kohlbecker
01:42 PM bug #7845 (Resolved): NamePopupEditor new Genus button should clear the genus name field in the n...
Clicking on the new button at the genus field in a NamePopupEditor opens a new NamePopupEditor with the genus name pr... Andreas Kohlbecker
06:44 PM feature request #7063: improve the area selection wizard for distribution editor
I updated description to refelct our decisions how the selection tree should work Andreas Müller
06:36 PM feature request #7063 (Feedback): improve the area selection wizard for distribution editor
Andreas Müller
06:12 PM feature request #7063: improve the area selection wizard for distribution editor
Performance has been improved by preselecting vocabularies in DB prefs or local prefs. Andreas Müller
10:52 AM feature request #7063 (Resolved): improve the area selection wizard for distribution editor
A lot of work on this has been done in #7793. I put to resolved to check if all issues reported here are resolved now. Andreas Müller
06:37 PM bug #7036: correctly release vaadin view resources when the browser windows has been closed
Resources which are still in memory after closing a browser window should be destroyed automatically once the next he... Andreas Kohlbecker
06:08 PM bug #7036: correctly release vaadin view resources when the browser windows has been closed
the problem seems mainly to be caused by the `NavigationManagerBean` not releasing the references to `RegistrationWor... Andreas Kohlbecker
04:57 PM bug #7036: correctly release vaadin view resources when the browser windows has been closed
after editing in parallel with 3 users for some time and closing all browser tabs afterwards, some spring beans like ... Andreas Kohlbecker
12:47 PM bug #7036: correctly release vaadin view resources when the browser windows has been closed
it seems as this is not yet solved. Andreas Kohlbecker
06:30 PM Revision 789f987c (taxeditor): ref #7063 remove "Base -" from area label for parent areas (was no...
Andreas Müller
06:07 PM bug #7856: Allow local override for distribution vocabularies
NOTE: currently when using the local preferences and deselecting some areas they are not shown anymore when you next ... Andreas Müller
05:59 PM bug #7856 (New): Allow local override for distribution vocabularies
copied from #7235
Currently local override for TaxDistributionEditor areas allows only to further reduce the vocab...
Andreas Müller
06:03 PM feature request #7235: Make available area vocabularies a database preference for TaxEditor distr...
Andreas Müller wrote:
>
> Only "local override" does not yet exist and therefore should the checkbox in DB prefs s...
Andreas Müller
05:08 PM feature request #7235 (Feedback): Make available area vocabularies a database preference for TaxE...
This works fine now. There are open issues with the setting of the local areas to be used. But this is another ticket... Andreas Müller
11:08 AM feature request #7235 (Resolved): Make available area vocabularies a database preference for TaxE...
I guess this is implemented with #7793 so I put to resolved for review Andreas Müller
05:49 PM bug #7855 (Closed): PersonField modifies the nomenclaturalTitle forcing users to have the UPDATE ...
User with role submitter creates a new specimen typedesignation and adds an existing collector for which the submitt... Andreas Kohlbecker
05:29 PM bug #7848 (Resolved): Exceptions for some cdm preference pages
I guess this is fixed with the given commits? Andreas Müller
03:03 PM bug #7848 (Closed): Exceptions for some cdm preference pages
There are NPEs and index exceptions for *ABCD import configuration* and *Nomenclatural Code Admin* Patrick Plitzner
05:25 PM Revision d909dc2b (cdm-vaadin): removin unused initstrategy
Andreas Kohlbecker
05:21 PM Revision 925bbb39 (taxeditor): ref #7063 change label for distribution area selection button
Andreas Müller
04:52 PM task #7854 (New): Open issues in TaxDistributionEditor

* use NAT tables
* improve area selection dialog #7063
* remove factual data view, wenn opening distribution ed...
Andreas Müller
04:32 PM Revision 3d093bed (cdm-vaadin): fix #7845 new genus or species: setting value of genus or spec. e...
Andreas Kohlbecker
04:11 PM feature request #7502 (Closed): Add further columns to bulk editor
Open issues copied to new tickets. Close this ticket. Andreas Müller
04:11 PM feature request #7502: Add further columns to bulk editor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Question: does NAT support multi-sort? E.g. you want to sort fi...
Andreas Müller
04:08 PM feature request #7502: Add further columns to bulk editor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > The symbol still switches to label...
Andreas Müller
04:10 PM feature request #7853 (New): Support multi column sort for NAT tables (e.g. in bulk editor)
copied from #7502#note-16 Andreas Müller
04:08 PM Revision 53d9aad0 (taxeditor): fix #7810 Fix saving of specimen DB preferences
- failed to save when initally no preferences were set Patrick Plitzner
04:07 PM bug #7852 (New): NAT table symbols for boolean values change to text if columns are sorted
#7502#note-17 Andreas Müller
04:02 PM bug #7424: right click menu does not show up in name editor
As this is difficult to reproduce I close ticket. If it reoccurs we can reopen. Andreas Müller
04:02 PM bug #7424 (Closed): right click menu does not show up in name editor
PP: KL said this is fixed and discussed fix with me Andreas Müller
11:19 AM bug #7424 (Resolved): right click menu does not show up in name editor
Andreas Müller
11:19 AM bug #7424: right click menu does not show up in name editor
not sure if fully fixed already, however I set to resolved for review. Andreas Müller
04:01 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
Can we create a new ticket for the remaining issues and close this one?
Does this ticket need further review from ...
Andreas Müller
03:54 PM bug #7851 (New): [DISCUSS] How to handle connection issues during tasks
If e.g. lazy loading fails any task (e.g. opening term editor) fails just at some undefined moment.
We need to handl...
Andreas Müller
03:44 PM bug #7827 (Feedback): LazyInitializationException when saving term editor (named areas)
removed open issues to new ticket #7850. I think we can close *this* ticket.
I only have a question: why can an LI...
Andreas Müller
01:01 PM bug #7827: LazyInitializationException when saving term editor (named areas)
I also can not reproduce the LIE anymore. However, whenever I move a term or save changes or even when opening E+M se... Andreas Müller
09:35 AM bug #7827 (Resolved): LazyInitializationException when saving term editor (named areas)
I added the named area level to the property path. With this change I could not reproduce this exception. This should... Patrick Plitzner
03:41 PM bug #7850: Further problems with term editor
AM:
Gibts für die MultiRep bzw. das Term Verschiebeproblem schon ein Ticket? Wenn ich ein Area verschiebe wird er ...
Andreas Müller
03:39 PM bug #7850: Further problems with term editor
Added commits from #727 related to this ticket to the ticket. Andreas Müller
03:33 PM bug #7850 (Resolved): Further problems with term editor
After fixing LIE in #7827 there are further issues with term editor.
* Sometimes when opening or working with ter...
Andreas Müller
03:40 PM Revision 5d47cf79 (taxeditor): ref #7844 Filter out "localhost" cdm server in ping test
Patrick Plitzner
03:24 PM Revision 6f9a92e5 (taxeditor): ref #7844 Close http client after getting info
Patrick Plitzner
03:22 PM Revision bba916c9 (taxeditor): ref #7844 Close socket after ping
Patrick Plitzner
03:10 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
AM:
Grundsätzlich ist das Problem nicht ganz trivial, da das Zusammenspiel zwischen Default Werten, geänderten Wer...
Andreas Müller
03:09 PM bug #7849 (New): Improve DB Preferences handling and saving in TaxEditor
Currently it often happens that DB preferences are not (correctly) saved if pressing OK or Apply in DB preferences di... Andreas Müller
03:07 PM Revision ebeb81f5 (taxeditor): ref #7848 Fix NPE
Patrick Plitzner
03:04 PM Revision 06738419 (taxeditor): ref #7848 Fix index out of bounds exception
Patrick Plitzner
03:04 PM bug #7047: Vaadin UI and View scope beans are not always destroyed correctly
if you think it is fixed shouldn't we set it to resolved and keep in 5.4 milestone? So we remember it as being primar... Andreas Müller
02:46 PM bug #7047: Vaadin UI and View scope beans are not always destroyed correctly
this should be fixed mean while according to the examination made for #7824
I am leaving this issue open to be con...
Andreas Kohlbecker
02:56 PM feature request #7660 (Closed): Indicate the row state in a NAT table via symbols
The row state is now indicated via symbol in title cache column. As described above a separate column would improve t... Andreas Müller
02:54 PM feature request #7847 (New): Use separate column for row state instead of symbol in titleCache co...
copied from #7660#note-6 (description there) Andreas Müller
02:43 PM bug #7824 (Closed): PopupViewRegistration not removing registered views causes memleak
no more remains after editing in popups opened from the registrationworkingset Andreas Kohlbecker
02:38 PM bug #7822 (Duplicate): RegistrationUI potentially causes memory problems or deadlocks
Andreas Kohlbecker
02:02 PM feature request #7820: Add cron job for deleting cdmserver log files after a specified time period
the creation of rolling logs is still very much unreliabale so that working on this issue makes not much sense. Maybe... Andreas Kohlbecker
01:54 PM bug #6383 (Rejected): fatal error on git push: The remote end hung up unexpectedly
This will become irrelevant once we moved completely to github or gitlab.
Andreas Kohlbecker
01:53 PM bug #6257 (Worksforme): incorrect SNAPSHOT version after HFX release in cdm-vaadin and cdm-webapp
this did not occure again since 2 years Andreas Kohlbecker
01:49 PM bug #7783 (Closed): NamePopupEditor new buttons for genus and species
Wolf-Henning Kusber wrote:
> It should be pre-selected as "genus" or "species" respectively.
it works exactly lik...
Andreas Kohlbecker
01:16 PM bug #7783: NamePopupEditor new buttons for genus and species
Correction: Button new exists for genus, a new form is loaded. It should be pre-selected as "genus" or "species" resp... Wolf-Henning Kusber
01:05 PM bug #7783: NamePopupEditor new buttons for genus and species
Button new exists for genus, but seems to be without function (same form reloaded).
Functionallity for genus and spe...
Wolf-Henning Kusber
01:49 PM task #7846 (Resolved): PopupEditors show editor context information as 'breadcrumbs' in the heade...
This is important for users not to lose track when opening multiple popups. Andreas Kohlbecker
01:47 PM feature request #7408: [E+M] Support for preferred common names in data portal
This is critical for Euro+Med Portal release Andreas Müller
01:43 PM Revision a9c45e1e (taxeditor): fix #7844 Add timeout to login dialog
Patrick Plitzner
01:03 PM bug #7835 (Closed): taxonGraph search block implemented
completed Andreas Kohlbecker
12:40 PM bug #7835 (Feedback): taxonGraph search block implemented
Andreas Müller
12:01 PM bug #7835 (Worksforme): taxonGraph search block implemented
Search implemented and functioning. Search result need some time. No user feedback, if a string is not in the system.... Wolf-Henning Kusber
01:02 PM Revision 0b494565 (cdm-dataportal): ref #7835 adding 'no results found' to registration search re...
Andreas Kohlbecker
12:38 PM task #7843 (New): blocking registrations can get lost when first TaxonNamePopupEditor with new na...
Consider the following situation:
1. Registration Workingset Editor: user starts creating a new name
1. From the ...
Andreas Kohlbecker
12:03 PM bug #7842 (Closed): TaxonNamePopEditor: adding new name as replaced synonym to name with basionym...
Andreas Kohlbecker
12:03 PM bug #7842 (Resolved): TaxonNamePopEditor: adding new name as replaced synonym to name with basion...
Applied in changeset commit:cdm-vaadin|c320e0fa87d07c13f3744f510c49504adf704f21. Andreas Kohlbecker
12:02 PM bug #7842: TaxonNamePopEditor: adding new name as replaced synonym to name with basionym causes N...
This problem is caused by the code which creates the blocking registrations see #7630 Andreas Kohlbecker
11:26 AM bug #7842 (Closed): TaxonNamePopEditor: adding new name as replaced synonym to name with basionym...
This case is not expected to occur often in real live situations:
A name has a basionym with authorship *A*. Addin...
Andreas Kohlbecker
12:03 PM Revision c320e0fa (cdm-vaadin): fix #7842 reloading registration before adding blocking registrat...
Andreas Kohlbecker
11:41 AM Revision f57aebc4 (cdmlib): ref #7831 using uuids in findTaxonNameParts() methods as name exclude...
Andreas Kohlbecker
11:37 AM bug #7723 (Closed): PhycoBank unpublished data must not be visible in Portal
Problem fixed, published records visible, unpublished records not visible. Wolf-Henning Kusber
11:18 AM feature request #7680: Refactor TaxonNodeDetailElement
some work has been done within #7793, I added the commits to *this* ticket.
However, due to the described problem ...
Andreas Müller
11:15 AM Revision d02788a3 (cdm-vaadin): ref #7630 fixing creation of blocking registrations realted to ne...
Andreas Kohlbecker
11:13 AM feature request #3989 (Resolved): [DISCUSS] Allow defining the vocabularies to be offered in the ...
maybe fixed already, so set to resolved Andreas Müller
11:11 AM bug #7236 (Resolved): Make available distribution status a database preference for TaxEditor dist...
I guess this is resolved with #6159 and #7793, set for review Andreas Müller
11:06 AM feature request #7283 (Resolved): Improvements for alternative identifier search
for review, move open issues to new ticket #7841 Andreas Müller
11:05 AM feature request #7841 (New): identifier search: filtering by identifier types
copied from #7283 Andreas Müller
10:57 AM bug #6159 (Resolved): improve distribution editor in TaxEditor
Setting this to resolved to do review. Open remaining issues ticket if necessary. Distribution will go online with th... Andreas Müller
10:48 AM feature request #7793 (Resolved): Master ticket for E+M editor issues
Set to resolved to do review for current version. Move open issues to follow up ticket. Andreas Müller
10:17 AM feature request #7840 (New): [DISCUSS] Remove authors from "Articles"
For nomenclatural references we do not necessarily need to store the author together with the "article". It is clear ... Andreas Müller
10:07 AM Revision 1f5b408c (taxeditor): ref #7827 Code cleanup
Patrick Plitzner
10:04 AM Revision 0bfb1b18 (taxeditor): ref #7827 Also remove generalizationOf if term is moved
Patrick Plitzner
10:04 AM Revision 3c6e3303 (taxeditor): ref #7827 Fix term/distribution content provider
- Remove accidental merging of "includes" set into "eneralizationOf"
set
Patrick Plitzner
10:03 AM bug #7839 (New): IJournal should not have author, date published etc.
Check again which parts are allowed for journals. Andreas Müller
09:36 AM Revision 602d39cf (taxeditor): ref #7827 Extend property path to NamedAreaLevel
Patrick Plitzner
09:36 AM Revision c0292658 (taxeditor): ref #7827 code cleaning
Patrick Plitzner
06:42 AM Revision f808cb88 (taxeditor): ref #7809: check if inverse representation is null instead of label
Katja Luther

10/22/2018

05:40 PM Revision 2ac69f0c (cdmlib): ref #7831 using uuids in findTaxonNameParts() methods as name exclude...
Andreas Kohlbecker
05:18 PM bug #7767 (In Progress): Incorrect handling of secundum detail reference in formatter
**TODO**: remove workaround applied with commit:cdm-dataportal|79f9e857 Andreas Kohlbecker
05:14 PM bug #7729 (New): potential ehcache CacheConfiguration problem
Andreas Kohlbecker
05:11 PM bug #7766 (Closed): Remaining issues for using relationship DTO webservice in portal
this issue seems complete, since #7771 is in it's own ticket. Andreas Kohlbecker
05:06 PM Revision aec3c7b7 (cdmlib): ref #7791 adding rank order index to TaxonGraphNodeDTO
Andreas Kohlbecker
05:05 PM Revision 876970d9 (cdmlib): ref #7834 bugfix: returning empty page when no name matches
Andreas Kohlbecker
04:37 PM bug #7085: cdmserver logfiles getting too big, use DailyRollingFileAppender
for the coming release I will add the following configuration to edit-int, edit-test and edit-production:
~~~
##
...
Andreas Kohlbecker
02:48 PM bug #7085: cdmserver logfiles getting too big, use DailyRollingFileAppender
we can use the Log4J config provided as
~~~
-Dlog4j.configuration=file:///opt/cdmserver/.cdmLibrary/log4j.proper...
Andreas Kohlbecker
02:45 PM bug #7827: LazyInitializationException when saving term editor (named areas)
I would move this issue to the next milestone because this exception does not happen every time.
The Termeditor ha...
Patrick Plitzner
02:40 PM bug #7827 (Feedback): LazyInitializationException when saving term editor (named areas)
I can't respoduce this reliably Patrick Plitzner
02:06 PM bug #7827 (In Progress): LazyInitializationException when saving term editor (named areas)
Patrick Plitzner
08:31 AM bug #7827 (Resolved): LazyInitializationException when saving term editor (named areas)
I added a property path to the term loading. Then I tried to reproduce the problem but it did not happen to me. Patrick Plitzner
02:41 PM Revision bb431d84 (cdm-server): ref #7085 changing logging initialization for more consistent log...
Andreas Kohlbecker
01:09 PM Revision a77e70cf (taxeditor): ref #7806 Add timeout to web requests
Patrick Plitzner
12:31 PM Revision bd3e9107 (cdmlib): Merge branch 'develop' into wordExport
Patrick Plitzner
12:30 PM Revision 4c8b61dd (taxeditor): ref #7806 Change search syntax
Patrick Plitzner
11:14 AM feature request #7838 (Closed): Optimize details view creation for section expansion
commit:taxeditor|ed60b90ee62498a090152019ecec946920feb2a8
commit:taxeditor|9d0d72efc1bb886e62820891ce080d84428052b1
...
Patrick Plitzner
11:10 AM feature request #7838 (Closed): Optimize details view creation for section expansion
Section expansion state should be evaluated at creation time Patrick Plitzner
11:11 AM bug #7814: Section in Name and section in Basionym, usability
this is fixed now, please confirm Andreas Kohlbecker
11:10 AM bug #7831 (Closed): VALIDATE_AGAINST_HIGHER_NAME_PART specific epithet name is not exluded when c...
fully solved Andreas Kohlbecker
11:08 AM feature request #7788 (Closed): Registration page shows registration date and office
Andreas Kohlbecker
11:07 AM bug #7777 (Closed): NPE on login attempt after logout
no more NPEs on re-logins Andreas Kohlbecker
09:52 AM feature request #7805 (Duplicate): GfBio Term Search issues
Patrick Plitzner
09:50 AM Revision edd8f8c8 (taxeditor): Refresh selection dialog after widget creation to evaluate button ...
Patrick Plitzner
09:14 AM bug #7835 (Resolved): taxonGraph search block implemented
implementation is complete, please review Andreas Kohlbecker
09:05 AM feature request #7775: Factual Data label issue
The label in the factual data view is now updated when changing sources. But still it is not directly updated in the ... Patrick Plitzner
08:35 AM feature request #7775: Factual Data label issue
Andreas Müller wrote:
> If reference selection dialog is canceled a new description is created, however AND an empty...
Patrick Plitzner
09:03 AM Revision c559d0b4 (taxeditor): ref #7775 Update label when changing sources
Patrick Plitzner
08:55 AM feature request #7791 (Resolved): Visualize the phycobank higher taxon graph
Andreas Kohlbecker
08:34 AM Revision a347d48a (taxeditor): ref #7775 Canceling reference selection does not create a description
Patrick Plitzner
08:29 AM Revision b32ea08b (taxeditor): ref #7827 Add property path to term loading in term editor
Patrick Plitzner
08:25 AM Revision b0ad8fba (taxeditor): i18n + code clean up
Patrick Plitzner
08:04 AM Revision 4d231867 (taxeditor): Remove misplaced <definition> tag in plugin extensions
Patrick Plitzner
07:58 AM feature request #7776: Add source of descriptive data set to SpecimenDescriptions added to it
@Andreas: A simple code review on the first commit is probably enough if you don't have the time to test it in live a... Patrick Plitzner
07:52 AM Revision dc6c8364 (cdm-server): ref #7085 Remove whitespace in log file time stamp
Patrick Plitzner
 

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