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From 06/24/2018 to 07/23/2018

07/20/2018

10:06 PM Revision e2da4a33 (cdm-vaadin): ref #7223 improving the layout for all reference types by impleme...
Andreas Kohlbecker
06:17 PM Revision 7c3f1a46 (taxeditor): ref #7575 Add toggle button for aggregated/exact quant data editing
Patrick Plitzner
05:50 PM Revision a42acd70 (taxeditor): ref #7575 Refactor label accumulation
Patrick Plitzner
05:42 PM bug #7557 (Resolved): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
Andreas Kohlbecker
05:42 PM bug #7557 (Feedback): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
I can no longer reproduce this issue since #7574 is fixed.
Henning, please try be yourself to reproduce this bug. ...
Andreas Kohlbecker
11:31 AM bug #7557: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup e...
[another report of the same bug:]
Lieber Andreas,

http://test.e-taxonomy.eu/cdmserver/phycobank_production/a...
Andreas Kohlbecker
05:34 PM bug #7574: IllegalStateException: Multiple representations ... when saving ReferenceEditor with ...
I hope and think that this issue is finally fixed now.
please review.
Andreas Kohlbecker
05:07 PM bug #7574 (Resolved): IllegalStateException: Multiple representations ... when saving ReferenceE...
Applied in changeset commit:cdm-vaadin|1641827e91d78dc483e225d1265e88d317e5d981. Andreas Kohlbecker
01:06 PM bug #7574 (Resolved): IllegalStateException: Multiple representations ... when saving ReferenceE...
IllegalStateException: Multiple representations when saving ReferenceEditor with in Refercence
This happens when c...
Andreas Kohlbecker
05:27 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typ...
resolved also through the changes made for #7574, so this is clearly a duplicate Andreas Kohlbecker
05:25 PM Revision 4f0afd36 (cdm-vaadin): navigating to RegistrationStart after Reference deletion in empty...
Andreas Kohlbecker
05:09 PM Revision cd661671 (cdm-vaadin): removing useless select clean
Andreas Kohlbecker
05:08 PM Revision 46b6ab50 (cdm-vaadin): removing old commented code
Andreas Kohlbecker
05:07 PM Revision 1641827e (cdm-vaadin): fix #7574 adding the ToOneRelatedEntityReloader to the TeamOrPers...
Andreas Kohlbecker
02:43 PM Revision d12e0f5d (taxeditor): ref #7575 Enable quantitative dialog cell editor
Patrick Plitzner
01:11 PM Revision b119ef11 (taxeditor): ref #7575 Add (still disabled) quantitative dialog cell editor
Patrick Plitzner
01:10 PM feature request #7575 (New): Implement advanced quantitative cell editor
Editor should have two states:
* Edit a list of exact values
* edit aggregated values like min, max, etc.
Impr...
Patrick Plitzner
12:08 PM task #7573 (New): CollectionPopEditor superCollection only visible for advanced users
super collection field only visible for selected users (Role=CURATOR|ADMIN)
First of all can the concept of the su...
Andreas Kohlbecker
12:02 PM feature request #7572 (New): SpecimenTypeDesignationEditor: Collection combobox shows collection....
this is required because ...
Fall 3: Es gibt einen Code, der identisch mit einen Index Herbariorum Code ist (NWU) ...
Andreas Kohlbecker
12:00 PM feature request #7571 (New): Collection editor has field to select and edit the institution
Wenn alle Institutionen einen Code haben, ist alles fein.

Normaler Weise gibt es 3 Fälle:
Fall 1: Code nac...
Andreas Kohlbecker
11:58 AM feature request #7570 (New): Institution editor implemented
An InstitutionPopupEditor is urgently needed for Collection and also important for References Andreas Kohlbecker
10:54 AM feature request #7569: SpecimenTypeDesignationEditor: Typedesignations should be ordered
fixed and ready for review. Andreas Kohlbecker
10:53 AM feature request #7569 (Resolved): SpecimenTypeDesignationEditor: Typedesignations should be ordered
Applied in changeset commit:cdm-vaadin|6055cbe049e1e8d7db866c07419c26f705acb5f8. Andreas Kohlbecker
10:52 AM feature request #7569 (Resolved): SpecimenTypeDesignationEditor: Typedesignations should be ordered
[requested by Henning]:
Anfrage zur Sortierung der Typen:
Zeitlich und logisch gebe ich zuerst den Lectotypus an,...
Andreas Kohlbecker
10:53 AM Revision 6055cbe0 (cdm-vaadin): fix #7569 ordering typedesignations in workingset by type
Andreas Kohlbecker
10:28 AM bug #7566 (Resolved): TeamOrPersonField: some Persons can not be selected
Andreas Kohlbecker
08:34 AM bug #7566: TeamOrPersonField: some Persons can not be selected
These problems are related to the changes made for #7535
The root cause is the code line
~~~java
private v...
Andreas Kohlbecker
10:18 AM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second sel...
duplicate of #7566 Andreas Kohlbecker
10:14 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly sta...
Andreas Kohlbecker
10:13 AM bug #7568 (Resolved): SpecimenTypeDesignationEditor: Collector Field not following the readonly s...
Applied in changeset commit:cdm-vaadin|7278c990f5a49dd1a0fd17d9cd705717cfd4279f. Andreas Kohlbecker
08:56 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly sta...
Andreas Kohlbecker
10:13 AM Revision 7278c990 (cdm-vaadin): fix #7568 Collector Field readlony when editor is readonly
Andreas Kohlbecker
08:41 AM Revision 1fc42b13 (cdm-vaadin): ref #7566 solving problem with unselectable entities due to eager...
Andreas Kohlbecker

07/19/2018

06:09 PM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second sel...
reported by Hening:
Auswahl wird beim ersten Auswählen nicht angenommen, erst nach 2. Auswahl.
Andreas Kohlbecker
06:05 PM Revision 99529ce3 (cdm-vaadin): ref #7566 using the COLLECTOR_TITLE for the collector combobox
Andreas Kohlbecker
06:03 PM bug #7566: TeamOrPersonField: some Persons can not be selected
I found one minor issue while investigating this: The NOMENCLATURAL_TITLE was being used for the caption of the coll... Andreas Kohlbecker
05:51 PM bug #7566 (Resolved): TeamOrPersonField: some Persons can not be selected
This issue only occurs with some few Persons:
[originally reported by Hennig]
Folgende Eingabeprobleme im speci...
Andreas Kohlbecker
05:15 PM Revision 098b6358 (cdm-dataportal): ref #7494 registration search filter layout improvements
Andreas Kohlbecker
05:05 PM Revision e6409ceb (cdm-dataportal): ref #7496 fixing erroneous acive state of tree items when in ...
Andreas Kohlbecker
04:52 PM Revision b49c60b7 (cdm-dataportal): ref #7494 fixing form action url in search registration block
Andreas Kohlbecker
04:37 PM feature request #7496: TaxonNodes in cdm_taxontree can either link to taxon or reference search r...
implemented and ready for testing Andreas Kohlbecker
04:37 PM feature request #7496 (Resolved): TaxonNodes in cdm_taxontree can either link to taxon or referen...
Applied in changeset commit:cdm-dataportal|8a4d078dfa6e2200f5e4b25c28d1bdcb7d82cf7b. Andreas Kohlbecker
04:37 PM Revision 8a4d078d (cdm-dataportal): fix #7496 cdm_taxontree can either link to taxon or reference...
Andreas Kohlbecker
03:55 PM Revision a3228c59 (cdm-dataportal): ref #7565 marking all code to be removed with comments
Andreas Kohlbecker
03:51 PM Revision 7ac8c744 (cdm-dataportal): ref #7565 marking all code to be removed with comments & ref ...
Andreas Kohlbecker
03:47 PM task #7565 (New): cdm_taxontree remove all code for using the tree to browse drupal term taxonomies
The cdm_taxontree has been developed to provide dual use:
1. Browse cdm classifications
1. Browse drupal term t...
Andreas Kohlbecker
03:25 PM bug #6356: taxontree sort order as in editor
no longer important for phycobank since we will model the classification with taxon relations Andreas Kohlbecker
03:14 PM feature request #7494: RegistrationSearch implemented
Implemented, please test. There are two ways to perform a search:
1. go to the registration search directly http:/...
Andreas Kohlbecker
03:08 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the det...
all done! Andreas Kohlbecker
03:06 PM feature request #6967 (Closed): RegistrationController identifier endpoints implemented
complete! Andreas Kohlbecker
03:05 PM feature request #7348 (Closed): RegistrationDTO webservices implemented
complete! Andreas Kohlbecker
11:43 AM feature request #7348: RegistrationDTO webservices implemented
Andreas Kohlbecker wrote:
> **TODO:**
>
> remove the following fields from DTO Serialization:
>
> * `typeDesi...
Andreas Kohlbecker
03:05 PM Revision 810710a0 (cdm-dataportal): ref #7494 registration search block can be used on any page
Andreas Kohlbecker
02:58 PM bug #7564 (New): remove Phycobank - Registration data - block and other outdated registration code

also remove `render_registrations()` in name.inc?
Andreas Kohlbecker
02:43 PM task #7562 (Resolved): Specimen table "Associated with" taxon is irritating and needs to be remov...
Hallo Norbert,
nach Rücksprache mit Patrick habe ich erfahren, dass die Anforderung das "assoziierte" Taxon bei de...
Andreas Kohlbecker
02:13 PM bug #7563 (In Progress): requests with %2F in URL are rejected by apache
Andreas Kohlbecker
02:00 PM bug #7563 (In Progress): requests with %2F in URL are rejected by apache
requests like http://test.e-taxonomy.eu/cdmserver/phycobank_production/registrationDTO/identifier/http%+3+A%2F%2Fphyc... Andreas Kohlbecker
12:09 PM feature request #7495 (Resolved): Registration page implemented
ready for the review Andreas Kohlbecker
12:05 PM Revision 2a14e5d9 (cdm-dataportal): ref #7348 margin to separate items in the registrationWorkingSet
Andreas Kohlbecker
11:37 AM Revision 5e4cae59 (cdm-dataportal): ref #7495 bug fix
Andreas Kohlbecker
10:54 AM Revision 29cfa0a7 (cdmlib): ref #7348 implementing registrationWorkingSet service endpoint and ha...
Andreas Kohlbecker
10:52 AM Revision 828a0c8c (cdm-dataportal): code cleaning and adding missing doc
Andreas Kohlbecker
10:39 AM Revision 6cbefddc (cdm-dataportal): ref #7495 reference page lists registrations
Andreas Kohlbecker
08:29 AM Revision eec520d3 (cdmlib): ref #7561 removing associated name and protologue from OccurrencePort...
Andreas Kohlbecker
08:28 AM Revision cdf0f80b (cdmlib): ref #7348 ordering registrations by identifier
Andreas Kohlbecker
08:26 AM Revision afedac7e (cdmlib): ref #7348 stripping .json and .xml from reguest urls
Andreas Kohlbecker
08:20 AM Revision db725031 (cdm-dataportal): ref #7495 Registration page implemented
Andreas Kohlbecker

07/18/2018

09:38 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested c...
Thank you for reviewing. I will close this issue now. Andreas Kohlbecker
06:44 PM bug #7554 (Worksforme): TeamOrPersonField: removing existing team and adding new team leaves nest...
New multiauthor teams consisting of existing and new authors can be built without errors. Wolf-Henning Kusber
04:45 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested...
Andreas Kohlbecker
04:45 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
With the last commit I no longer can reproduce any of the issues described in this ticket.
Please review.
Andreas Kohlbecker
07:11 PM Revision 1e87f89f (cdm-dataportal): ref #7495 extracting derivate_hierarchy_table creating as com...
Andreas Kohlbecker
06:03 PM task #7561 (In Progress): OccurrencePortalController and FieldUnitDTO should not allow passing th...
Andreas Kohlbecker
04:50 PM task #7561: OccurrencePortalController and FieldUnitDTO should not allow passing the determintati...
Point 1) in this issue description was also raised for the data_portal in #6816 as point 4). The "Associated with" in... Andreas Kohlbecker
03:45 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the det...
The OccurrencePortalController allows requests of the form `/portal/occurrence/{uuid}/derivateHierarchy?uuid={taxonUu... Andreas Kohlbecker
05:34 PM Revision 09f028e2 (cdm-dataportal): ref #7562 removing "Associated with" name from Specimen table
Andreas Kohlbecker
05:23 PM Revision c9e72155 (cdm-dataportal): adapting test base class to changes to the search result list...
Andreas Kohlbecker
05:13 PM bug #6816 (Closed): [Dataportal] Specimen table issues
For me the issue raised in point 4) is not solved or answered satisfyingly. I stumbled over this in the attempt to us... Andreas Kohlbecker
04:59 PM task #7562 (Resolved): Specimen table "Associated with" taxon is irritating and needs to be remov...
see issues #6816, #7561 for older information on this.
Andreas Kohlbecker
04:45 PM Revision d7780a19 (cdm-dataportal): adapting test base class to changes to the search result list...
Andreas Kohlbecker
04:29 PM Revision 9cd8700e (cdm-vaadin): ref #7547 ref #7554 list entry buttons enablement uses sharedStat...
Andreas Kohlbecker
04:16 PM bug #7547: ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is re...
the changes for this ticket cause other problems: #7554 Andreas Kohlbecker
03:05 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor
clearing the session only after a exception seems to work by now.
Once it is confirmed that the session problems a...
Andreas Kohlbecker
03:00 PM bug #7559 (Worksforme): possibly corrupted hiberante session after previous error on saving editor
Andreas Kohlbecker
02:23 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
modified error handling: only clearing the session, no longer closing it in turn of errors commit:cdm-vaadin|a903034c Andreas Kohlbecker
02:21 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
Closing the session in turn of exceptions seems to cause other problems:
[reported by Henning]
Referenz „Ehrenb...
Andreas Kohlbecker
03:02 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused duri...
This was caused by a change related to #7559 and was fixed with commit:cdm-vaadin|f53fffc Andreas Kohlbecker
02:42 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused duri...

~~~
[phycobank] 14:25:46,718 ERROR [qtp759156157-24][eu.et.va.mv.AbstractPopupEditor] - org.springframework.orm.hi...
Andreas Kohlbecker
02:59 PM Revision f53fffc6 (cdm-vaadin): ref #7559 clearing of the hibernate session only after exceptions...
Andreas Kohlbecker
02:17 PM Revision a903034c (cdm-vaadin): ref #7558 clearing only of the hibernate session after exceptions...
Andreas Kohlbecker
02:09 PM Revision 68eab158 (taxeditor): ref #7549 Add min and max data series to quant data chart
Patrick Plitzner
11:30 AM Revision f563ed61 (taxeditor): ref #4611 i18n feature tree editor
Patrick Plitzner
11:01 AM Revision 021883d9 (taxeditor): code cleanup
Patrick Plitzner

07/17/2018

09:28 PM bug #7558 (Resolved): IllegalStateException: Multiple representations ... when saving first type...
Andreas Kohlbecker
05:41 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typ...
New Registration -> new reference -> with rerenceType mit team (first autor + empty second) -> save -> reopen add fu... Andreas Kohlbecker
09:26 PM Revision 9399c5ec (cdm-vaadin): ref #7558 clearing the hibernate session after exceptions and clo...
Andreas Kohlbecker
05:45 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor

this error has possibly been caused by the error documented in #7558
~~~
Jul 17, 2018 4:49:21 PM com.vaadin.s...
Andreas Kohlbecker
05:31 PM bug #7557 (Resolved): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
potentially caused by the same bug as #7574
from the stacktrace it is not clear which popup editor was being saved...
Andreas Kohlbecker
04:44 PM Revision e0d3e148 (cdm-dataportal): ref #7495 basic version of reference page implemented
Andreas Kohlbecker
04:27 PM Revision b517c9e7 (cdm-dataportal): removing useless theme mehod theme_cdm_specimen()
Andreas Kohlbecker
03:48 PM Revision 302af519 (taxeditor): Implement QuantitativeData cell editor prototypes
Patrick Plitzner
03:47 PM Revision 3a6e3f9e (taxeditor): ref #7549 Show chart for quantitative values
Patrick Plitzner
02:42 PM Revision a39a62de (taxeditor): i18n
Patrick Plitzner
02:33 PM Revision f87588d3 (taxeditor): Fix potential NPE
Patrick Plitzner
02:22 PM Revision 6789eff8 (cdm-dataportal): harmonizing search result rendering and theming
Andreas Kohlbecker
01:32 PM Revision 0a1dc066 (cdm-dataportal): harmonizing search method names
Andreas Kohlbecker
01:30 PM Revision 24797d7f (cdm-dataportal): removing unused code and harmonizing search method names
Andreas Kohlbecker
01:02 PM feature request #7494 (Resolved): RegistrationSearch implemented
Applied in changeset commit:cdm-dataportal|a6ae799bf137d61817db96bd5b32bdeed480e09e. Andreas Kohlbecker
01:02 PM Revision a6ae799b (cdm-dataportal): fix #7494 registration search form block and result page
Andreas Kohlbecker
12:35 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags
Andreas Kohlbecker
12:35 PM bug #7552 (Resolved): use TaggedText.entityReference to add style and uuid to html tags
Applied in changeset commit:cdm-dataportal|55083981158955cd614c2c59cb4d965581686160. Andreas Kohlbecker
12:35 PM Revision 55083981 (cdm-dataportal): fix #7552 rendering TaggedText.entityReference information as...
Andreas Kohlbecker
11:03 AM bug #7554 (In Progress): TeamOrPersonField: removing existing team and adding new team leaves nes...
The bug obviously still exists when a Person is added to an existing team. Andreas Kohlbecker
07:15 AM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Hallo Henning,
ich befürchte der Test-Server war noch nicht auf dem neuesten Stand als du getestet hattest. BItte ...
Andreas Kohlbecker
09:54 AM Revision 64a68019 (taxeditor): ref #7549 Change format of quantitative label
Patrick Plitzner
09:42 AM feature request #7217: SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude fields allo...
Known minor point:
On my computer, decimal values are only accepted if a Komma is used. A full stop is ignored by th...
Wolf-Henning Kusber

07/16/2018

09:00 PM bug #7555 (New): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae serching for "Lapsana c...

the request:
http://api.cybertaxonomy.org/cichorieae/portal/taxon/find.json?doTaxaByCommonNames=1&doMisapplie...
Andreas Kohlbecker
04:33 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Problem solved, but not very user-friendly.
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registrat...
Wolf-Henning Kusber
04:07 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Problems solved, please test. Andreas Kohlbecker
04:06 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested...
Applied in changeset commit:cdm-vaadin|1fef72149b63a405d436e3174ca513c3e961275b. Andreas Kohlbecker
03:57 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested c...

habe ein Problem mit einem neuen Autorenteam in der Section.
Workingset: http://test.e-taxonomy.eu/cdmserver/phyco...
Andreas Kohlbecker
04:33 PM Revision 8938d9a0 (cdm-dataportal): method doc
Andreas Kohlbecker
04:06 PM Revision 1fef7214 (cdm-vaadin): fix #7554 resetting nested components readonly states when settin...
Andreas Kohlbecker
03:26 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib
can be closed if the changes are not again causing any obvious errors Andreas Kohlbecker
02:49 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib
The `VaadinUserHelper` which was registering itself in the vaadin session was causing problems in the cdm-webapp.war ... Andreas Kohlbecker
02:57 PM Revision 587dbb82 (cdmlib): ref #7550 pluggable Role tests for the UserHelper
Andreas Kohlbecker
02:51 PM Revision 320ad9d6 (cdm-vaadin): ref #7550 replacing the selfregisration of the VaadinUserHelper t...
Andreas Kohlbecker
12:06 PM Revision f6205f4c (taxeditor): Fix frozen layer when toggling tree/list view
Patrick Plitzner
11:20 AM Revision 49df31fc (taxeditor): Add loading label to character matrix
Patrick Plitzner
09:38 AM Revision daf4e2c3 (taxeditor): ref #7549 Change format of frequency count in tooltip
Patrick Plitzner

07/13/2018

02:54 PM Revision 59fd2600 (taxeditor): Fix potential NumberFormatException in quant data cell editor
Patrick Plitzner
02:52 PM Revision d05bf8bd (taxeditor): ref #7549 Add quant statistic tooltip to character matrix
Patrick Plitzner
01:56 PM Revision e2e88c52 (taxeditor): ref #7549 Rename categorical tooltip class
Patrick Plitzner
01:24 PM Revision eb71aa23 (taxeditor): ref #7549 Add quant statistic map to character matrix
Patrick Plitzner
01:22 PM Revision c0abdb1d (taxeditor): Fix potential NPE when saving
Patrick Plitzner
01:09 PM Revision 6eb9a868 (cdmlib): ref #7348 preliminar swagger documentation on RegistrationDTOControll...
Andreas Kohlbecker
12:37 PM Revision 60f27ea9 (cdm-vaadin): ref #7348 implementing find service for registrations with user, ...
Andreas Kohlbecker
12:36 PM Revision bca2429d (cdmlib): ref #7348 implementing find service for registrations with user, type...
Andreas Kohlbecker
12:23 PM Revision 998e1b74 (cdm-server): setting java code level to 1.8 and removing attribute fom launcher
Andreas Kohlbecker
10:20 AM Revision bd5a558a (taxeditor): ref #7549 Refactoring
Patrick Plitzner
08:32 AM Revision a3a12095 (taxeditor): ref #7549 Add/use apache common math for frequency distribution
Patrick Plitzner
07:57 AM Revision 727a2e1a (cdmlib): ref #7348 typeDesignations as non bean property to supress it for Reg...
Andreas Kohlbecker
07:51 AM Revision 2c2458d7 (cdm-vaadin): adapting TypeDesignationSetManagerIT to changes in TypeDesignatio...
Andreas Kohlbecker
07:41 AM Revision 6d3bedb0 (taxeditor): ref #7549 Fix layout
Patrick Plitzner
07:41 AM Revision 7a8baaba (taxeditor): ref #7549 Code refactoring
Patrick Plitzner

07/12/2018

10:26 PM feature request #7348: RegistrationDTO webservices implemented
**TODO:**
remove the following fields from DTO Serialization:
* `typeDesignations`
* `orderdTypeDesignationWo...
Andreas Kohlbecker
10:23 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
please review.
Andreas Kohlbecker
10:19 PM task #7550 (Resolved): Move UserHelper from cdm-vaadin into cdmlib
close if the changes are not causing any obvious errors Andreas Kohlbecker
02:15 PM task #7550 (Resolved): Move UserHelper from cdm-vaadin into cdmlib
The `AbstractController` already duplicates some of the methods offered by the UserHelper. The UserHelper for now is... Andreas Kohlbecker
10:13 PM Revision 0240f48b (cdm-vaadin): ref #7550 adding CdmUserHelper to test application context
Andreas Kohlbecker
10:11 PM Revision 050137a3 (cdmlib): ref #7348 TypeDesignationSetManager provides TaggedText representation
Andreas Kohlbecker
09:17 PM Revision 93d11c3e (cdmlib): removing bug which was introduced in 7dcfc77
Andreas Kohlbecker
05:44 PM task #7553 (New): move TypeDesignationSetManagerIT to cdmlib
the `TypeDesignationSetManager` has been moved (#7348, commit:6e858cb7) to cdmlib but the according test still reside... Andreas Kohlbecker
05:40 PM Revision 41556e03 (cdm-vaadin): ref #7552 adapting cdm-vaadin to TypedEntityReference now being i...
Andreas Kohlbecker
05:31 PM Revision 09f4db2f (cdmlib): ref #7552 adding TypedEntityReference data to TaggedText
Andreas Kohlbecker
05:31 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags
TaggedText as provided by the cdmlib not provides TypedEntityReference information in the property TaggedText.entityR... Andreas Kohlbecker
05:13 PM Revision 7dcfc771 (cdmlib): removing almost unused type check methods from TaggedText
Andreas Kohlbecker
05:06 PM feature request #7551 (New): TypeDesignationSetManager provides summary as TaggedText
TypeDesignationSetManager can provide a summary of the ordered type designations. For the dataportal the summary shou... Andreas Kohlbecker
04:58 PM feature request #6967 (Resolved): RegistrationController identifier endpoints implemented
Applied in changeset commit:cdmlib|f9bb9711ec4265c5862d4616477c24fc9a16fa2f. Andreas Kohlbecker
04:56 PM feature request #6967: RegistrationController identifier endpoints implemented
the endpoint `/registration/{localID}` is not needed, is it? Andreas Kohlbecker
04:58 PM Revision cb3d5203 (cdmlib): ref #7550 relaxing bean dependencies for tests without security context
Andreas Kohlbecker
04:58 PM Revision f9bb9711 (cdmlib): fix #6967 implementing registration/identifier endpoints for domain e...
Andreas Kohlbecker
04:58 PM Revision 42171057 (cdmlib): typo
Andreas Kohlbecker
04:58 PM Revision d2e6ea3e (cdmlib): ref #7527 adding missing @Transactional to new service methods
Andreas Kohlbecker
04:58 PM Revision 36476e4c (cdmlib): ref #7550 adding CdmUserHelper and interfaces in cdmlib (commit also ...
Andreas Kohlbecker
04:42 PM Revision 391e9f07 (taxeditor): ref #7549 Add toggle button for tooltips
Patrick Plitzner
03:17 PM Revision 96aadc03 (taxeditor): Fix refresh problem after toggling list/tree view
Patrick Plitzner
03:16 PM Revision 1d11c7f6 (taxeditor): Fix potential ClassCastException
Patrick Plitzner
02:43 PM Revision 39939f0e (cdm-vaadin): ref #6967 moving RegistrationWorkingSetService to cdmlib
Andreas Kohlbecker
02:41 PM Revision a2728ed2 (cdm-vaadin): ref #7550 moving the actual CdmUserHelper to cdmlib and making it...
Andreas Kohlbecker
02:40 PM Revision 37f70555 (cdm-vaadin): ref #7550 moving the actual CdmUserHelper to cdmlib and making it...
Andreas Kohlbecker
02:07 PM task #7546: Better guidance for users when creating registrations for exising names
Dieser 2. Satz ist vielleicht wirklich überflüssig, er beleuchtet lediglich die Hintergünde zu Satz 1.
Ok, streich...
Andreas Kohlbecker
01:48 PM task #7546: Better guidance for users when creating registrations for exising names
Brauchen wir alle 3 Sätze. Der 2. ist schwer verständlich. Bin alles mit unserer native Speakerin durchgegangen. Ihr ... Wolf-Henning Kusber
12:46 PM Revision 40cce442 (cdmlib): Specify return value for data value
Patrick Plitzner
12:45 PM Revision 41883468 (taxeditor): ref #7549 Implement historgram tooltip for categorical data
Patrick Plitzner
12:39 PM feature request #7549 (New): Show tooltip for data aggregation in character matrix
When hovering over any cell of the summary row a tooltip should show up giving a brief statistical summary of the cur... Patrick Plitzner
10:16 AM feature request #7548 (New): RegistrationWorkingSetEditor loads slowly with big working sets
The RegistrationWorkingSetEditor not only loads slowly when initially opened also when saving a popup editor the work... Andreas Kohlbecker
09:08 AM Revision f4028415 (taxeditor): Fix potential NPE
Patrick Plitzner

07/11/2018

06:02 PM Revision 9d35d224 (cdm-vaadin): fixing NPE in ToManyRelatedEntitiesListSelect
Andreas Kohlbecker
03:47 PM task #7527 (Resolved): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Applied in changeset commit:cdmlib|51ee66dc3a639019afbb58811e32c98e0f186b12. Andreas Kohlbecker
03:43 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
... also `public Pager<T> page(Class<? extends T> clazz, String param, String queryString, MatchMode matchmode, List... Andreas Kohlbecker
03:04 PM task #7527 (In Progress): CdmEntityDaoBase.*ByParam() public and also available in the service layer
I implemented `public Pager<T> pageByRestrictions(Class<? extends T> clazz, String param, String queryString, MatchMo... Andreas Kohlbecker
03:47 PM Revision 86257e3b (cdmlib): ref #6967 implementing /registration/{identifier} in RegistrationCont...
Andreas Kohlbecker
03:46 PM Revision 51ee66dc (cdmlib): fix #7527 making page by parameter with criteria and restrictions ava...
Andreas Kohlbecker
02:30 PM Revision 1a836a82 (cdm-vaadin): readonly notification in editors
Andreas Kohlbecker
01:31 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig edi...
fixed! Andreas Kohlbecker
01:31 PM bug #7547 (Resolved): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig e...
Applied in changeset commit:cdm-vaadin|8a1add900f82f756d5df22205144a50b0deca0cb. Andreas Kohlbecker
01:13 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig edi...
see this screenshot for example:
![](picture507-1.png)
Andreas Kohlbecker
01:31 PM Revision 8a1add90 (cdm-vaadin): fix #7547 ToManyRelatedEntitiesListSelect buttons adapt to compon...
Andreas Kohlbecker
01:15 PM Revision 52ecbe10 (cdmlib): ref #7546 RegistrationIdentifierMinter can check for matching identif...
Andreas Kohlbecker
01:07 PM task #7546: Better guidance for users when creating registrations for exising names
done and ready for review.
When reviewing please have extra critical eyeball on the text close to the bottom of t...
Andreas Kohlbecker
01:04 PM task #7546 (Resolved): Better guidance for users when creating registrations for exising names
Applied in changeset commit:cdm-vaadin|cf9c36f82e17e2f5fb613ef6132994544c523a81. Andreas Kohlbecker
11:56 AM task #7546 (In Progress): Better guidance for users when creating registrations for exising names
A dialog is not the best solution, adding the required ui elements to the footer section of the workingset editor is ... Andreas Kohlbecker
01:05 PM Revision 97ed6049 (taxeditor): ref #7509 Enhance aggregation dialog
Patrick Plitzner
01:04 PM Revision 72ad71d3 (cdm-vaadin): ref #7546 preventing from adding a second type only registration ...
Andreas Kohlbecker
01:03 PM Revision fe042ecb (taxeditor): ref #7509 Fix potential NPE
Patrick Plitzner
01:02 PM Revision 58d10253 (taxeditor): Add confirmDialog method for multiple dialog buttons
Patrick Plitzner
11:59 AM Revision cf9c36f8 (cdm-vaadin): fix #7546 implementing workflow for creating registrations for ex...
- Label with explanations for users
- Select element offering to create registrations for name and types or for tape...
Andreas Kohlbecker

07/10/2018

06:41 PM Revision 1acb2d39 (taxeditor): ref #7509 Add "Aggregate" button to character matrix
- aggregation will create a description on the common parent taxon of
all taxa included in the descriptive data set O...
Patrick Plitzner
06:26 PM Revision c4606d40 (cdmlib): ref #7509 aggregate quant. and categorical data (simple concatenation)
Patrick Plitzner
05:32 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDe...
perfekt! Wolf-Henning Kusber
04:39 PM bug #7545 (Resolved): IllegalStateException: Multiple representations ... when saving first type...
Applied in changeset commit:cdm-vaadin|af8ec722535f95fcccdc5f4fd4562238987d300a. Andreas Kohlbecker
03:56 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
I reproduced this issue.
Duplicate cdm entities only exist after pressing the save button for the new typedesigna...
Andreas Kohlbecker
02:58 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
The aftereffects disappeared after restarting the cdm-remote instance. So these secondary problems where most probabl... Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Hallo Henning,
durch den ersten Fehler wurde eine Registrierung erzeugt, die keine TypeDesignation hatte. Das sie ...
Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Und wenn man nach diesem Identifier sucht gibt es auch eine Fehlermeldung [#!list/inProgress]:
~~~
java.lang.Null...
Andreas Kohlbecker
02:29 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Hallo,

nach dem Fehler, konnte ich keine neuen existierenden Namen auswählen (alter Fehler)
nach aus und einlogg...
Andreas Kohlbecker
02:29 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDe...
Henning reported this error which happened while creating a registration for the existing name *Rhopalodia hirudinifo... Andreas Kohlbecker
04:52 PM Revision 25bd222a (taxeditor): ref #7509 Add prototype aggregation function to character matrix
Patrick Plitzner
04:51 PM Revision da7cc762 (cdmlib): ref #7509 Adapt aggregation method parameter list
Patrick Plitzner
04:39 PM Revision af8ec722 (cdm-vaadin): fix #7545 loading typifiedName into cache to avoid multiple repre...
Andreas Kohlbecker
03:46 PM bug #7331: AdvancedBeanInitializer fails to initialize properties of preinitialized beans in the ...
Adding exported breakpoints from my eclipse which might help debugging this issue. Andreas Kohlbecker
03:37 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
rejected in favor of #7546 Andreas Kohlbecker
12:04 PM bug #7523: RegistrationWorkingSetEditor: existing name combobox must only offer names which are n...
The above change has been applied after receiving the below email:
Hallo,

um vorgesehene Registrierungen (Ty...
Andreas Kohlbecker
03:35 PM task #7546 (Resolved): Better guidance for users when creating registrations for exising names
The strategy followed in #7523 effectively blocks creating registrations for existing names, which makes not much sen... Andreas Kohlbecker
01:14 PM Revision 1b5e778c (cdmlib): ref #7509 Generalize method parameter to List
Patrick Plitzner
12:54 PM Revision 84482875 (cdmlib): Merge branch 'develop' into aggregation
# Conflicts:
# cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java
Patrick Plitzner
12:07 PM feature request #7348 (In Progress): RegistrationDTO webservices implemented
Andreas Kohlbecker
11:55 AM Revision 3e1190d6 (cdm-vaadin): ref #7523 removing name filter again, since this is blocking the ...
Andreas Kohlbecker
11:16 AM Revision 587cdbe5 (taxeditor): Fix potential NPE and endless loop
Patrick Plitzner
11:15 AM bug #7544 (New): Dragging a misapplication onto itself throws an exception in name editor
When dragging and dropping a misapplication onto itself in the taxon name editor the following exception is thrown an... Patrick Plitzner
10:57 AM bug #7538: Concurrent modification problem: Taxon turned into synonym by other user pritor saving...
This could also be related to the same problem of concurrent editing:
"...mal wieder ein hübscher kleiner Fehler b...
Patrick Plitzner
10:48 AM bug #7543 (New): Name Editor does not auto-scroll during dragging
Hallo,
bei langen Synonymlisten scrolled die Liste nicht nach oben, wenn man ein Synonym dem Namen oder einem ande...
Patrick Plitzner
10:42 AM bug #7542 (New): Move synonym of homotypical group to taxon does not move the homotypical group c...
Hallo,
wir stoßen in neue Bug-Sphären vor.
Sophia hat versucht, im NameEditor die Reihenfolge der Synonyme zu k...
Patrick Plitzner
10:39 AM Revision 45649db0 (cdm-vaadin): enabling editing of registration identifiers
Andreas Kohlbecker
10:36 AM bug #7541 (New): Insufficient rights lead to corrupted UI handling
Hallo,
wir haben angefangen die Iresines einzugeben. Auf Sophias Rechner traten dabei merkwürdige Fehler auf, und ...
Patrick Plitzner
10:34 AM bug #7540 (New): RemoteAccessException when changing taxon to synonym in taxon navigator
"Hallo,
ich arbeite über Eduroam im Haus. Im Taxonomic Tree ändere ich den Status auf Synonym, dann langes Warten ...
Patrick Plitzner
10:31 AM bug #7539 (New): Synonym drag and drop sometimes does not refresh correctly
* one case is described in the parent ticket
* another case: "nach Synonym-Accepted Swap im NameEditor und anschließ...
Patrick Plitzner

07/09/2018

06:25 PM bug #7505 (Feedback): IllegalStateException: Multiple representations problem when adding Annotat...
@Andreas K.: Could you please test again if the multi rep exception still occurs? I re-enabled the parallel loading b... Patrick Plitzner
06:24 PM Revision 6fd99a64 (taxeditor): ref #7505 re-enable parallel loading for bulk editor
Patrick Plitzner
06:02 PM bug #7538 (New): Concurrent modification problem: Taxon turned into synonym by other user pritor ...
** Originally reported as:**
Liebes Edit-Team,
Manchmal erscheint dieser Fehler, wenn man nach Eingabe der Type...
Andreas Kohlbecker
05:56 PM Revision 92ec40db (taxeditor): Refactor character matrix
- code cleanup Patrick Plitzner
04:26 PM Revision bbed9d01 (taxeditor): Refactor character matrix
- unify summary row configs Patrick Plitzner
04:18 PM Revision c5a4b091 (taxeditor): Refactor character matrix
- extract cell selection config Patrick Plitzner
04:12 PM Revision f9df6d49 (taxeditor): Refactor character matrix
- extract column header config Patrick Plitzner
03:36 PM bug #7537 (New): Taxeditor can not connect to restarted, added cdm instance
After adding and starting, stopping and restarting the new cdn-server instance cdm_phycobank_production on edit test,... Andreas Kohlbecker
03:15 PM Revision 5889f0c3 (taxeditor): Add small delay to description load job
Patrick Plitzner
03:06 PM Revision b9e727eb (cdm-vaadin): ref #7361 fixing update problem of editOrCreate button
Andreas Kohlbecker
02:37 PM bug #7361 (Feedback): Consistent UI concept for create, new, add, remove, delete, edit buttons
Henning,
what do you think?
Andreas
Andreas Kohlbecker
02:36 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons
Another UI concept:
* use add row and remove icons like: ![](picture79-1.png), ![](picture79-2.png) from (https:/...
Andreas Kohlbecker
02:27 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons
adding a screenshot of the more consistren UI with the new "create-new" icon:
![](picture29-1.png)
Andreas Kohlbecker
02:34 PM Revision dedec018 (taxeditor): Refactor character matrix
- extract data conversion config
- extract summary row config
Patrick Plitzner
02:11 PM Revision c500743f (taxeditor): Refactor character matrix + different color for taxon rows
Patrick Plitzner
01:57 PM Revision 3428ae9c (taxeditor): Refactor character matrix
- extract label accumulator Patrick Plitzner
01:15 PM Revision 7256d30f (cdm-vaadin): avoiding occational NPE in updateEditOrCreateButton()
Andreas Kohlbecker
01:10 PM Revision fb908fa3 (cdm-vaadin): ref #7361 icon 'create-new' modified
Andreas Kohlbecker
12:25 PM Revision c09732ba (cdm-vaadin): ref #7361 creating new icon 'create-new' & introducing ButtonFact...
Andreas Kohlbecker
12:23 PM Revision ef4b0cab (cdm-vaadin): fixing NPE for selection of null Basionym
Andreas Kohlbecker
11:34 AM Revision f4928b93 (taxeditor): Updated style of character matrix
Patrick Plitzner
09:21 AM Revision 2c54db81 (taxeditor): Apply modern theme to CharacterMatrix
Patrick Plitzner
09:16 AM Revision f2e0fed4 (taxeditor): Refactor CharacterMatrix code
- extract bottom toolbar composite Patrick Plitzner
09:13 AM Revision 95272d6e (taxeditor): Refactor CharacterMatrix code
- extract toolbar composite Patrick Plitzner

07/06/2018

05:02 PM Revision afcdb95b (taxeditor): Extend troubleshooting (OpenJDK9 taxon navigator problem)
Patrick Plitzner
03:17 PM bug #7531 (Resolved): PermissionDeniedException on flushing registration with modified status eve...
Fixed by implementing solution 1)
@Andreas Müller: can you please review the changes in cdmlib?
Andreas Kohlbecker
03:14 PM Revision 9b0a65f5 (cdmlib): Merge branch 'feature/#7531' into develop
Andreas Kohlbecker
03:10 PM Revision 8f51ee96 (cdmlib): ref #7531 CdmPermissionEvaluator.hasPermission() wraps cdm entities i...
Andreas Kohlbecker
02:32 PM Revision 99a498e7 (cdm-vaadin): ref #7534 fixing submitter filter for continue mode
Andreas Kohlbecker
02:28 PM Revision 56e9117c (cdmlib): ref #7531 RegistrationVoter evaluates previous state on Registration....
Andreas Kohlbecker
02:01 PM Revision 96e043f8 (taxeditor): ref #7439 Split BulkEditorE4 in E4 part and Composite
- clean up code Patrick Plitzner
01:27 PM Revision 72ce5ca1 (cdmlib): ref #7531 intoducing TargetEntityStates to replace plain cdm enities ...
Andreas Kohlbecker
01:05 PM Revision 63a2e46c (taxeditor): ref #7439 Code refactoring
Patrick Plitzner
12:03 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner
12:02 PM Revision 6328df3b (taxeditor): ref #7518 Colorize deduplication rows + tooltip
Patrick Plitzner
11:59 AM bug #7535: TeamOrPersonField: remove OK button an select the chosen enitity immediately
implemented and ready for review Andreas Kohlbecker
08:27 AM bug #7535 (Resolved): TeamOrPersonField: remove OK button an select the chosen enitity immediately
Applied in changeset commit:cdm-vaadin|87bbccd430886b5a2b9c744e0dc018e7d6235920. Andreas Kohlbecker
08:02 AM bug #7535 (Resolved): TeamOrPersonField: remove OK button an select the chosen enitity immediately

Henning:
Bei Auswahl eines Authors muss OK gedrückt werden, sonst wird eine leere Sektion gespeichert.
Vorschla...
Andreas Kohlbecker
11:58 AM Revision b7f9be76 (cdm-vaadin): fix #7535 TeamOrPersonField and PersonField without OK button - b...
Andreas Kohlbecker
08:27 AM Revision 87bbccd4 (cdm-vaadin): fix #7535 TeamOrPersonField and PersonField without OK button
Andreas Kohlbecker
08:06 AM Revision fd071f70 (cdm-vaadin): un-boxing
Andreas Kohlbecker

07/05/2018

09:40 PM bug #7534 (Closed): registration list filters preserved in session
Andreas Kohlbecker
09:38 PM bug #7534 (Resolved): registration list filters preserved in session
Applied in changeset commit:cdm-vaadin|1e6c448a39b44580362af902142a2af98cfadf2c. Andreas Kohlbecker
06:30 PM bug #7534: registration list filters preserved in session
storing this data in the session is faster to implement Andreas Kohlbecker
06:01 PM bug #7534 (Closed): registration list filters preserved in session
symptoms caused by this issue:
1. registration list pager loses filters when navigating to other page - critical
...
Andreas Kohlbecker
09:40 PM Revision 3c4acc0c (cdm-vaadin): hint on unselecting items in multiselect list
Andreas Kohlbecker
09:37 PM Revision b13dc53b (cdm-vaadin): fixing pager for last page
Andreas Kohlbecker
09:34 PM Revision 1e6c448a (cdm-vaadin): fix #7534 storing search filter settings in session
Andreas Kohlbecker
06:27 PM feature request #7518 (In Progress): remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner
06:26 PM Revision 112bb8fd (taxeditor): ref #7518 Adjust columns size
Patrick Plitzner
05:59 PM feature request #7533: add typeStatus filter to registration list
Ready for review Andreas Kohlbecker
05:57 PM feature request #7533: add typeStatus filter to registration list
there are a couple of old data sets with typeStatus = null, therefore I am adding the null as filter option Andreas Kohlbecker
05:22 PM feature request #7533 (Resolved): add typeStatus filter to registration list
Applied in changeset commit:cdm-vaadin|56432bdd018d92bebb99ecfdaeca8721d7927416. Andreas Kohlbecker
03:26 PM feature request #7533 (Resolved): add typeStatus filter to registration list
The filter options in the registration list view should offer to filter by TypeDesignation.status:
The filter will...
Andreas Kohlbecker
05:55 PM Revision dcd8a4c1 (cdm-vaadin): ref #7533 typeStatus filter for registration list view - adding n...
Andreas Kohlbecker
05:22 PM Revision 56432bdd (cdm-vaadin): fix #7533 typeStatus filter for registration list view
Andreas Kohlbecker
05:21 PM Revision 94263696 (cdmlib): ref #7533 RegistrationService with typeStatus filter
Andreas Kohlbecker
03:42 PM Revision 7e055a60 (cdmlib): renaming variable
Andreas Kohlbecker
02:14 PM bug #7531: PermissionDeniedException on flushing registration with modified status even if the us...
Solution 1) still looks like the best option we have. Andreas Kohlbecker
11:53 AM bug #7531 (In Progress): PermissionDeniedException on flushing registration with modified status ...
Andreas Kohlbecker
02:11 PM Revision 1c47af77 (taxeditor): ref #7518 Adjust visibility of context menu items
Patrick Plitzner
02:11 PM Revision 212da61f (taxeditor): ref #7518 re-enable cell text selection (on double-click)
Patrick Plitzner
10:27 AM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Andreas Müller wrote:
> shouldn't we close this as a kind of duplicate for #6321? With reverting #6321 this problem ...
Patrick Plitzner
08:56 AM Revision ead6f0f6 (cdm-vaadin): fixing problem with empty partials in RegistrationRequiredDataIns...
Andreas Kohlbecker
07:59 AM bug #7222: Phycobank UI improve labels
Andreas Kohlbecker wrote:
> [Answer by Walter]
>
> Also nur Namen ab der Rangstufe Genus sind „uninomials“, finde...
Andreas Kohlbecker
07:55 AM bug #7222: Phycobank UI improve labels
Hallo,

dann schließe ich mich gerne der allgemeinen Definition an. Habe es noch mal nachgelesen und Walter hat Re...
Andreas Kohlbecker
07:55 AM bug #7222: Phycobank UI improve labels
[Answer by Walter]
Hallo,
merkwürdig, da sind Henning und ich (und Nick Turland) nicht der gleichen Meinung:

...
Andreas Kohlbecker

07/04/2018

05:28 PM bug #7524 (Closed): TaxonNameEditor blocks entering new names for genera
Andreas Kohlbecker
05:25 PM bug #7524 (Worksforme): TaxonNameEditor blocks entering new names for genera
works :) Wolf-Henning Kusber
04:49 PM bug #7524 (In Progress): TaxonNameEditor blocks entering new names for genera
Solved and ready for the review. Andreas Kohlbecker
04:42 PM bug #7524 (Resolved): TaxonNameEditor blocks entering new names for genera
Applied in changeset commit:cdm-vaadin|9361ce643c9b449ce33d77973ffe7d6ff9fc80b5. Andreas Kohlbecker
03:29 PM bug #7524 (In Progress): TaxonNameEditor blocks entering new names for genera
Andreas Kohlbecker
04:53 PM feature request #4227: handle generated resources in eclipse workspace
Patrick and I decided that you will be the next tester. Andreas Kohlbecker
04:50 PM feature request #4227: handle generated resources in eclipse workspace
I tried the A+ strategy and it worked fine.
1. git checkout generated-resources
1. run `setup-project.sh`
1. Ins...
Patrick Plitzner
04:48 PM feature request #4227: handle generated resources in eclipse workspace
[Patrick has tested strategy A+, these are his results:]
* had to apply the `/cdmlib-parent/lifecycle-mapping-meta...
Andreas Kohlbecker
04:42 PM Revision 9361ce64 (cdm-vaadin): fix #7524 replacing uninomial field on rank change
Andreas Kohlbecker
03:24 PM bug #7385 (Closed): TaxonNameEditor adapt field visibility to rank
suggestion added to #7222#note-4 Andreas Kohlbecker
01:39 PM bug #7385: TaxonNameEditor adapt field visibility to rank
All is fine, except of one label:
Proposal: change "Infrageneric epithet" to "Infrageneric uninominal"
Reason: ...
Wolf-Henning Kusber
03:22 PM bug #7222 (Feedback): Phycobank UI improve labels
Henning suggested the following for the Name Editor:
* Proposal: change "Infrageneric epithet" to "Infrageneric un...
Andreas Kohlbecker
03:18 PM bug #7528: Allow changing the Registration status in the RegistrationWorkingsetEditor
This is now complete even if it is not yet possible for submitter to change the status due to the bug #7531. But this... Andreas Kohlbecker
03:06 PM bug #7528 (Resolved): Allow changing the Registration status in the RegistrationWorkingsetEditor
Applied in changeset commit:cdm-vaadin|725d1ff22626d3b584606a29756c4be7c750aca1. Andreas Kohlbecker
03:15 PM bug #7531 (Resolved): PermissionDeniedException on flushing registration with modified status eve...
User with the Grantedauthority `REGISTRATION(PREPARATION).[UPDATE]{06649467-7c4f-4b8b-98e6-395e4d3af240}` changes th... Andreas Kohlbecker
03:06 PM Revision 725d1ff2 (cdm-vaadin): fix #7528 indroducing RegistrationStatusSelect to allow setting t...
Andreas Kohlbecker
03:04 PM Revision bfc37f02 (cdm-vaadin): adding method fo find cdmAuthorities in the autenticated user
Andreas Kohlbecker
03:03 PM Revision e84525a1 (cdm-vaadin): typo in method name
Andreas Kohlbecker
02:53 PM Revision 0d707542 (cdmlib): TeamAutoInitializer only loads members for Teams
Andreas Kohlbecker
02:53 PM Revision 5ce3b66a (cdmlib): ref #7528 ref #6655 introducing RegistrationStatusTransitions to pro...
Andreas Kohlbecker
02:53 PM Revision 4a93959c (cdmlib): java doc and formatting
Andreas Kohlbecker
02:53 PM Revision 5d585cce (cdmlib): removing unnecessary casts
Andreas Kohlbecker
01:58 PM feature request #7131 (Closed): Registrations ListView has pager to browse the whole result set
Perfekt! Wolf-Henning Kusber
01:09 PM Revision fb4c402b (taxeditor): setSelection in bulkeditor only if the model contains the selected...
Katja Luther
01:09 PM Revision 814cb7e1 (taxeditor): bulkeditor list comparator is set by bulkeditorinput.getTitleCompa...
Katja Luther
01:09 PM Revision 2d912c1b (taxeditor): fix problem with titleCache comparator in user and group bulkeditor
Katja Luther
01:09 PM Revision 8da6ef3f (taxeditor): fix eexception in user and group bulk editor
Katja Luther
07:49 AM Revision 20878688 (cdm-vaadin): renaming RegistrationStateLabel to RegistrationStatusLabel
Andreas Kohlbecker

07/03/2018

06:25 PM Revision 5c3eea24 (cdm-vaadin): removing obsolete class TypeStateLabel
Andreas Kohlbecker
06:23 PM Revision 07fa0ede (cdm-vaadin): removing obsolete class RegistrationTypeConverter
Andreas Kohlbecker
06:21 PM bug #7528 (In Progress): Allow changing the Registration status in the RegistrationWorkingsetEditor
Andreas Kohlbecker
06:12 PM Revision 637becc5 (cdm-vaadin): ref #7331 using load instead of find to avoid the magic bug in th...
Andreas Kohlbecker
06:00 PM feature request #7131: Registrations ListView has pager to browse the whole result set
Hi Henning,
the pager is ready, you can review this feature now.
Andreas
Andreas Kohlbecker
05:59 PM feature request #7131 (Resolved): Registrations ListView has pager to browse the whole result set
Applied in changeset commit:cdm-vaadin|1a4c1ca754f6e7d8ce2fb04adab9f14c226b24fc. Andreas Kohlbecker
05:59 PM Revision 1a4c1ca7 (cdm-vaadin): fix #7131 pager implemented and added to registration list view
Andreas Kohlbecker
03:49 PM Revision d8d3a36b (taxeditor): Merge branch 'hotfix/5.1.2'
jenkins
03:41 PM Revision fde7c010 (cdm-vaadin): ref #7523 fixing bug in CdmFilterablePagingProvider
Andreas Kohlbecker
12:33 PM Revision cfbac3ec (cdmlib): cleanup
Andreas Müller
12:23 PM Revision a7e57e62 (cdmlib): ref #7530 3 families and dianthus import (WFO Access Import)
Andreas Müller
12:04 PM feature request #4227: handle generated resources in eclipse workspace
Ich habe einen branch **generated-resources** committed in dem alle .classpath and .project files gelöscht sind: com... Andreas Kohlbecker
09:25 AM feature request #4227: handle generated resources in eclipse workspace
auch der Wechsel auf einen anderen Branch klappt mit diesem Setup problemlos:
1. start im develop branch
1. `gi...
Andreas Kohlbecker
09:13 AM feature request #4227: handle generated resources in eclipse workspace
Ich habe heute morgen noch eine radikalere Strategie getestet - Stratregie **A+**:
1. Projekt in Eclipse gelöscht,...
Andreas Kohlbecker
11:58 AM Revision 5cded95c (taxeditor): ref #4227 deleting all .classpath and .project files
Andreas Kohlbecker
11:22 AM task #7364 (Closed): TaxonNameEditor supports editing of a validated name
Wolf-Henning Kusber
11:16 AM bug #7387 (Closed): TaxonNamePopEditor: ConstraintViolationException on saving a basionym
Wolf-Henning Kusber
11:16 AM bug #7387 (Worksforme): TaxonNamePopEditor: ConstraintViolationException on saving a basionym
Wolf-Henning Kusber
11:07 AM Revision 0eaf479c (taxeditor): setSelection in bulkeditor only if the model contains the selected...
Katja Luther
10:36 AM Revision 62315c71 (taxeditor): cleanup
Andreas Müller
10:26 AM bug #7179 (Closed): Phycobank: set protectedTitleCaches = 1 where Person contains no data
finally fixed! All changes applied to the phycobank production database Andreas Kohlbecker
10:24 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
fixing protectedNomenclaturalTitleCache
~~~sql
UPDATE AgentBase a SET protectedNomenclaturalTitleCache = 1
...
Andreas Kohlbecker
10:22 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
fixing
~~~sql
UPDATE AgentBase a SET protectedCollectorTitleCache = 1
WHERE DTYPE = 'Person' AND a.givenNa...
Andreas Kohlbecker
10:10 AM bug #7179 (In Progress): Phycobank: set protectedTitleCaches = 1 where Person contains no data
This only has been fixed for protectedTitleCache. The flags protectedCollectorTitleCache and protectedNomenclaturalTi... Andreas Kohlbecker
09:44 AM bug #7529 (New): Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
The ROLE_PUBLISH was not yet in the database and thus was created using the Taxeditor GrantedAuthority Create Dialog.... Andreas Kohlbecker
08:40 AM Revision c3b22cae (taxeditor): ref #4227 eu.etaxonomy.taxeditor.cdmlib/.classpath.template
Andreas Kohlbecker

07/02/2018

11:01 PM feature request #4227: handle generated resources in eclipse workspace
Hiermit ist mein Monster-Feedback #4227#note-7 bis #4227#note-10 zu Ende.
und ich bin der Meinung, dass `eu.etaxon...
Andreas Kohlbecker
10:55 PM feature request #4227: handle generated resources in eclipse workspace
also nochmal die Strategie (A) mit m2 plugin aber ganz von vorn und unter Einbeziehung der bisherigen Erkentnisse:
...
Andreas Kohlbecker
10:31 PM feature request #4227: handle generated resources in eclipse workspace
... Mist ich hatte das "Set as Target Platform" vergessen, sonst hätte es wohl funktioniert, dies habe ich leider ers... Andreas Kohlbecker
09:58 PM feature request #4227: handle generated resources in eclipse workspace
... das Problem ist offenbar, dass eclipse die maven source folder nicht erkennt und und `eu.etaxonomy.taxeditor.cdml... Andreas Kohlbecker
09:41 PM feature request #4227: handle generated resources in eclipse workspace
1. Projekt in Eclipse gelöscht
1. git workspace komplett ge-cleant mit `git clean -x`
1. `rm eu.etaxonomy.taxeditor...
Andreas Kohlbecker
08:26 PM feature request #4227: handle generated resources in eclipse workspace
The only generated resources which still is causing a conflict after setting up the project in eclipse is the
~~~...
Andreas Kohlbecker
03:39 PM Revision a9fcc7a1 (taxeditor): bulkeditor list comparator is set by bulkeditorinput.getTitleCompa...
Katja Luther
03:25 PM Revision ba5f20eb (taxeditor): fix problem with titleCache comparator in user and group bulkeditor
Katja Luther
03:12 PM Revision 68baf399 (taxeditor): Updated version in pom / project files to taxeditor version : 5.1....
jenkins
02:34 PM Revision 8a81795d (cdmlib): cleanup
Andreas Müller
01:53 PM bug #7528 (Resolved): Allow changing the Registration status in the RegistrationWorkingsetEditor
* Submitters should be able to set the status to **Curation** or to **Rejected**
* Curators should have all status a...
Andreas Kohlbecker
12:57 PM feature request #7131 (In Progress): Registrations ListView has pager to browse the whole result ...
Andreas Kohlbecker
12:51 PM bug #7523 (Resolved): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
Applied in changeset commit:cdm-vaadin|cd993d9573144e244060321aee0c1fb28416a73f. Andreas Kohlbecker
12:51 PM Revision cd993d95 (cdm-vaadin): fix #7523 excluding taxon nams which are already published
Andreas Kohlbecker
12:50 PM Revision d01b74ef (cdmlib): ref #7525 ref #7523 allowing to use Restriction as exclude filter
Andreas Kohlbecker
12:27 PM Revision 40b02195 (taxeditor): Merge branch 'hotfix/5.1.1'
jenkins
12:20 PM Revision 200b0606 (taxeditor): fix eexception in user and group bulk editor
Katja Luther
12:06 PM Revision bcd18ba7 (taxeditor): Updated version in pom / project files to taxeditor version : 5.1....
jenkins
09:32 AM Revision 0c12e309 (cdm-vaadin): ref #7523 exteding CdmFilterablePagingProvider by Restrictions fi...
Andreas Kohlbecker
09:13 AM Revision 024d9b21 (cdmlib): ref #7525 restoring all previously removed Criteria methods
Andreas Kohlbecker

07/01/2018

04:17 PM bug #7525: IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrict...
Andreas Kohlbecker wrote:
> The methods with `List<Criterion> criteria` are offering a different type of flexibility...
Andreas Müller

06/29/2018

11:05 PM Revision d791337a (cdmlib): Revert "ref #7527 renaming CdmEntityDaoBase.*ByParam* methods"
This reverts commit 13ec97dbc071864563698e422a15ad725e28a55b. Andreas Kohlbecker
05:50 PM bug #7525: IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrict...
The methods with `List<Criterion> criteria` are offering a different type of flexibility than those with `List<Restri... Andreas Kohlbecker
05:17 PM bug #7525 (Resolved): IdentifiableServiceBase findByTitle(), and listByTitle() methods support c...
Applied in changeset commit:cdmlib|a33babc0e0b88d6d8ee3968addd7f74bdaa14e93. Andreas Kohlbecker
05:27 PM task #7527 (Feedback): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Hi Andreas,
what do you think about exposing these methods to the public?
Andreas
Andreas Kohlbecker
05:26 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
I renamed the methods so that the more general an versatile methods have the shorter name. Andreas Kohlbecker
05:15 PM task #7527 (Resolved): CdmEntityDaoBase.*ByParam() public and also available in the service layer
The methods
* `CdmEntityDaoBase.countBy(Class<? extends T> clazz, String param, String queryString, MatchMode matc...
Andreas Kohlbecker
05:24 PM Revision 13ec97db (cdmlib): ref #7527 renaming CdmEntityDaoBase.*ByParam* methods
Andreas Kohlbecker
05:17 PM Revision a33babc0 (cdmlib): fix #7525 replacing Criteria lists by cdm Restrictions in CdmEntityDa...
Andreas Kohlbecker
10:33 AM feature request #7517 (New): Make search parameters like wildcards configurable
no, this is purely a taxeditor ticket. The service layer already offers many of these configurations but they can't b... Andreas Müller
10:24 AM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
shouldn't we close this as a kind of duplicate for #6321? With reverting #6321 this problem was "solved" also as far ... Andreas Müller

06/28/2018

05:29 PM task #7526 (New): move IdentifiableDaoBase.findByReferenceTitle() into ReferenceDao
findByReferenceTitle() searches for "title" which only exists in `Reference.class` therefor it makes no sense having ... Andreas Kohlbecker
04:27 PM bug #6282: FSI image viewer not working with https
I am assuming that it will not be possible to make the http://media.bgbm.org/ available under https therefore I am se... Andreas Kohlbecker
04:18 PM bug #6282: FSI image viewer not working with https
This is most probably caused by binding the fsi viewer flash app via http instead of https:
~~~html
<div id="im...
Andreas Kohlbecker
02:46 PM feature request #7517 (Feedback): Make search parameters like wildcards configurable
I guess this is more a cdmlib issue than something to be implemented in the taxeditor. The service methods need to of... Andreas Kohlbecker
02:36 PM bug #7525 (In Progress): IdentifiableServiceBase findByTitle(), and listByTitle() methods suppor...
Andreas Kohlbecker
02:36 PM bug #7525 (Resolved): IdentifiableServiceBase findByTitle(), and listByTitle() methods support c...
The methods `findByTitle()` and `listByTitle()` in IdentifiableServiceBase offer `List<Criterion> criteria` as method... Andreas Kohlbecker
12:56 PM task #7274 (Closed): GrantedAuthorityRevokingRegistrationUpdateLister: add the exception handling...
Andreas Kohlbecker
12:56 PM task #7274 (Resolved): GrantedAuthorityRevokingRegistrationUpdateLister: add the exception handli...
Applied in changeset commit:cdm-vaadin|4235f40e55e53768f68611ba51dc00721455e92e. Andreas Kohlbecker
12:56 PM Revision 4235f40e (cdm-vaadin): fix #7274 GrantedAuthorityRevokingRegistrationUpdateLister: closi...
Andreas Kohlbecker
12:56 PM Revision becb5ef0 (cdm-vaadin): documenting GrantedAuthorityRevokingRegistrationUpdateLister
Andreas Kohlbecker
12:17 PM bug #7524 (Closed): TaxonNameEditor blocks entering new names for genera
since the implementation of #7338 new genus names can not be entered. Andreas Kohlbecker
12:13 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
The existing name combobox currently offers all names even those which are already registered.
The pager CdmFilterab...
Andreas Kohlbecker
12:06 PM bug #7522: Show warning if the someone has changed data in a registration graph which is not a cu...
Hi Henning,
we should discuss if this is really a requirement for data consistency.
Andreas
Andreas Kohlbecker
12:06 PM bug #7522 (New): Show warning if the someone has changed data in a registration graph which is no...
For registrations check if the adjacent name or typedesignation entity graphs have been upated by another user since ... Andreas Kohlbecker
11:55 AM bug #7520: Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdateLister...
The next idea came up during a call with Andreas Müller:
The GrantedAuthorities are deleted as it is at the moment...
Andreas Kohlbecker
10:25 AM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
I guess something went wrong this morning with Redmine I only moved tickets which are "New" or in "Progress", when c... Andreas Kohlbecker
10:12 AM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Isn't this solved (more or less) in 5.1 already? Andreas Müller
10:25 AM feature request #3984 (Closed): Easier reference selection - recently used references
works fine Andreas Müller
09:07 AM feature request #3984 (Resolved): Easier reference selection - recently used references
now the last 6 references are shown in the selection dialog. Katja Luther
10:21 AM feature request #7508 (Closed): Add language information to term representations
This was an mistake, I guess we can close it now, don't you? Andreas Kohlbecker
10:11 AM feature request #7508: Add language information to term representations
This should be solved in 5.1. Why did you move it? Andreas Müller
10:05 AM task #5375: cdm-server without jsvc
next major release is not to be used anymore Andreas Müller
09:01 AM feature request #7463 (Closed): Move taxonnodes should be available for multiple selection
Katja Luther
09:00 AM feature request #7463: Move taxonnodes should be available for multiple selection
we have to have a look why the refresh sometimes does not work, therefore I create a new ticket and close this one (s... Katja Luther
09:00 AM bug #7521 (New): refresh of taxonnavigator sometimes does not work for moving taxonnodes
this is a remaining issue of 'Move taxonnodes should be available for multiple selection'
Andreas Müller wrote:
...
Katja Luther
08:55 AM feature request #7281 (In Progress): Implement bromelian import
Katja Luther
08:10 AM task #4911: improve performance of distributionInfoFor service
Hi Andreas, I am passing this issue to you, since you are in the euro+med sprint, ähhh, long-distance run! Andreas Kohlbecker

06/27/2018

12:02 AM bug #7092 (Resolved): Adapt dates in Nicks images after mediaCreated became TimePeriod
Andreas Müller
10:51 PM Revision c20857dd (taxeditor): Merge branch 'release/5.1.0' into develop
jenkins
10:51 PM Revision 69c7e199 (taxeditor): Merge branch 'release/5.1.0'
jenkins
10:45 PM Revision 4cfefef3 (cdmlib-apps): cleanup
Andreas Müller
10:43 PM Revision 562007ff (cdmlib-apps): update cdmlib version to 5.2.0-SNAPSHOT
Andreas Müller
10:39 PM Revision c5704ba9 (taxeditor): cleanup classpath
Andreas Müller
10:33 PM Revision 5f060ab5 (taxeditor): cleanup
Andreas Müller
07:54 PM bug #7520: Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdateLister...
The first idea of preserving the authorities in an Extension is not applicable since neither Registration nor User ar... Andreas Kohlbecker
03:53 PM bug #7520 (New): Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdate...
Currently the `GrantedAuthorityRevokingRegistrationUpdateLister` withdraws GrantedAuthorities from the sumbitter when... Andreas Kohlbecker
05:40 PM Revision 76af4b13 (cdm-server): Merge branch 'release/5.1.0' into develop
jenkins
05:40 PM Revision 07760191 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
05:40 PM Revision 09202e3a (cdm-server): updating poms for branch'release/5.1.0' with non-snapshot versions
jenkins
05:39 PM Revision 88e8b782 (cdm-webapp): Merge branch 'release/5.1.0' into develop
jenkins
05:39 PM Revision ce66ea32 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
05:39 PM Revision 63f739db (cdm-webapp): updating poms for branch'release/5.1.0' with non-snapshot versions
jenkins
05:39 PM Revision 1a7024c4 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.1.0
jenkins
05:39 PM Revision 88b7c562 (cdm-vaadin): Merge branch 'release/5.1.0' into develop
jenkins
05:39 PM Revision dd81e4f7 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
05:35 PM Revision 43161ae2 (cdm-dataportal): Merge branch 'release/5.1.0' into develop
jenkins
05:35 PM Revision a42353a3 (cdm-dataportal): updating poms for branch'release/5.1.0' with non-snapshot ver...
jenkins
05:35 PM Revision 77a4ad22 (cdm-vaadin): updating poms for branch'release/5.1.0' with non-snapshot versions
jenkins
05:35 PM Revision 74dcb4d4 (cdm-dataportal): release-preparation: production level css
jenkins
05:35 PM Revision be5bfc3b (cdm-vaadin): jenkins bumping cdmlib.version to 5.1.0
jenkins
04:02 PM Revision 03cebda7 (cdmlib): Updating develop poms back to pre merge state
jenkins
04:02 PM Revision 1d22a426 (cdmlib): Merge branch 'master' into develop
jenkins
04:02 PM Revision 051492e2 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
04:02 PM Revision 004a7a46 (cdmlib): Merge branch 'release/5.1.0'
jenkins
04:02 PM feature request #6655 (Rejected): Implement a RegistrationManager with state machine
Andreas Kohlbecker
03:43 PM Revision 3b7f3374 (cdmlib): updating poms for branch'release/5.1.0' with non-snapshot versions
jenkins
03:36 PM Revision 87f8bf77 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:36 PM Revision 45b33b6c (cdmlib): Merge branch 'master' into develop
jenkins
03:36 PM Revision 2d6a53a9 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:36 PM Revision 7db37afb (cdmlib): Merge branch 'release/5.1.0'
jenkins
03:22 PM Revision a2127735 (cdmlib): updating poms for branch'release/5.1.0' with non-snapshot versions
jenkins
03:20 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Müller wrote:
> Partial synonyms are not yet shown by default (at least not for cichorieae on test)
This ...
Andreas Kohlbecker
02:50 PM Revision 586faa25 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.1.0-SN...
jenkins
02:50 PM Revision 6854f19f (cdm-webapp): updating poms for 5.2.0-SNAPSHOT development
jenkins
02:50 PM Revision 5eecf8bd (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.2.0-SN...
jenkins
02:49 PM Revision 6970c38f (cdm-server): updating poms for 5.2.0-SNAPSHOT development
jenkins
02:49 PM Revision 3eae339f (cdm-dataportal): updating poms for 5.2.0-SNAPSHOT development
jenkins
02:49 PM Revision b9231fd2 (taxeditor): Updated version in pom / project files to taxeditor version : 5.2....
jenkins
02:49 PM Revision 9da34421 (taxeditor): Updated version in pom / project files to taxeditor version : 5.1....
jenkins
02:48 PM Revision 390b8d9e (cdm-vaadin): jenkins bumping cdmlib.version to 5.1.0-SNAPSHOT
jenkins
02:48 PM Revision 403adee5 (cdm-vaadin): updating poms for 5.2.0-SNAPSHOT development
jenkins
02:48 PM Revision 3e9ab1b7 (cdm-vaadin): jenkins bumping cdmlib.version to 5.2.0-SNAPSHOT
jenkins
02:45 PM Revision 15e3472f (cdmlib): updating poms for 5.2.0-SNAPSHOT development
jenkins
02:36 PM bug #7478 (Resolved): Fix pro parte synonym search
probably there are open issues that need to be moved to a new ticket. Andreas Müller
02:33 PM feature request #7517: Make search parameters like wildcards configurable
I strongly suggest creating a profound specification for this before anything is being implementing for this issue!
...
Andreas Kohlbecker
09:47 AM feature request #7517 (New): Make search parameters like wildcards configurable
For edaphobase users are used to use whitespace as wildcard.
We should make search parameters project and/or clien...
Andreas Müller
02:28 PM bug #7313 (Closed): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms ...
new ticket #7519 or remaining clean up.
I think wen can close this issue now. If you don't agree, Andreas, please ...
Andreas Kohlbecker
02:18 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabu...
Andreas Müller wrote:
> This should work.
>
> Personally I would first load/save the voc and then check the terms...
Andreas Kohlbecker
11:31 AM bug #7313 (Feedback): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all term...
This should work.
Personally I would first load/save the voc and then check the terms and add each term which is n...
Andreas Müller
02:26 PM bug #7519 (New): Avoid static terms
static terms defined in `KindOfUnitTerms` are directly used in other classes:
* RegistrationRequiredDataInserter...
Andreas Kohlbecker
02:17 PM Revision 84832a69 (taxeditor): set focus to search field when opening bulk editor
Katja Luther
02:15 PM Revision cb00dde8 (cdm-vaadin): ref #7313 creating vocabulary before terms
Andreas Kohlbecker
02:14 PM feature request #7439 (Closed): Use NatTable for BulkEditor
close this ticket and created a new one with remaining issues (#7518) Katja Luther
01:40 PM feature request #7439: Use NatTable for BulkEditor
The editing mode of the table caused a widget is disposed exception and no menu was shown.
I reverted these changes ...
Katja Luther
01:12 PM feature request #7439: Use NatTable for BulkEditor
Now, column resizing is disabled which is better then before. However, we should resize the table to window size at t... Andreas Müller
01:11 PM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Using the standard right click menu is cumbersome as clicking on a column cell immediately c...
Andreas Müller
02:12 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor
* ~~editable cell content/possibility to copy from a cell content~~
* ~~size of the rows should not be 50/50, but de...
Katja Luther
01:38 PM feature request #4101 (Closed): Default value for publish bit of new taxa must be configurable vi...
Seems to work now. Andreas Müller
12:21 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
12:20 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
Andreas Müller wrote:
> The preference is not stored in the DB. After reopening the preference view the publish flag...
Katja Luther
11:27 AM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
01:35 PM Revision ceac293a (taxeditor): revert edit of text in bulkeditor and resize of columns
Katja Luther
12:20 PM Revision 0dfdf125 (taxeditor): fix refresh details view for concept relationship changes in name ...
Katja Luther
11:01 AM Revision db9784f5 (taxeditor): fix correct icon refresh for concept relationship changes in name ...
Katja Luther
11:00 AM Revision 7f518e8a (taxeditor): add publish flag to newTaxonNodeWizard
Katja Luther
10:46 AM feature request #4363 (Feedback): Show more informative message for unsupported specimen structur...
Patrick Plitzner wrote:
> Now, a more informative message is shown. The text is generated in the DerivedUnitFacade c...
Andreas Müller
10:18 AM Revision c416d097 (taxeditor): fix #7227: remove marker menu in bulkeditor when nothing is selected
Katja Luther
09:21 AM bug #7227 (Worksforme): New name bulk editor shows all menu entries
We can close this ticket because with the NatTable implementation this problem does not exist anymore. Katja Luther
09:19 AM Revision c66e6cf5 (taxeditor): ref #4101: correct setting of values in publish flag wizard
Katja Luther
09:18 AM Revision 3527ae92 (cdmlib): fix NPE in toString of Abcd206ImportConfigurator
Katja Luther

06/26/2018

08:28 PM Revision 72966fb1 (cdm-vaadin): fixing broken test dataset
Andreas Kohlbecker
06:05 PM Revision 1b767585 (cdm-vaadin): typo
Andreas Kohlbecker
05:58 PM feature request #4101: Default value for publish bit of new taxa must be configurable via DB pref...
Andreas Müller wrote:
> We may also want to show the new publish flag value in the "new taxon" dialog. But this migh...
Andreas Müller
05:56 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
The preference is not stored in the DB. After reopening the preference view the publish flag option is still not set. Andreas Müller
04:20 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
04:20 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
Andreas Müller wrote:
> When trying to save I got:
>
> ~~~
> login : admin
> editor version : 5.1.0.20180619145...
Katja Luther
04:11 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Applied in changeset commit:taxeditor|8360c0ff2bbc09ed93a487bd5e7451f197785edf. Katja Luther
05:38 PM bug #7227 (Feedback): New name bulk editor shows all menu entries
Do I understand correctly that the "Set marker" menu item appears due to #7516? If this is the case then we can close... Andreas Müller
04:38 PM bug #7227 (Resolved): New name bulk editor shows all menu entries
create a new ticket for the correct handling of details view, if no entity is selected and close this ticket. (see #7... Katja Luther
05:26 PM feature request #7463 (Feedback): Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> The refresh issue still exists and is critical. It seems to happen with large subtrees. E.g....
Andreas Müller
04:34 PM feature request #7463 (Resolved): Move taxonnodes should be available for multiple selection
now there are two subtasks: moving taxa and saving/reindexing, showing more subtasks are not really possible. please ... Katja Luther
05:12 PM feature request #7464 (Closed): make move Taxonnodes a longrunning task
Seems to be fully implemented. Andreas Müller
04:26 PM feature request #7464 (Resolved): make move Taxonnodes a longrunning task
this should be fixed now, please review Katja Luther
05:10 PM Revision 9f42f4d1 (taxeditor): revert cleanup
Andreas Müller
04:58 PM Revision c508431a (taxeditor): cleanup
Andreas Müller
04:38 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Müller wrote:
> The symbols are still used in incorrect direction. On the side of the "real" taxon (which ta...
Andreas Müller
04:31 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Partial synonyms are not yet shown by default (at least not for cichorieae on test) Andreas Müller
04:30 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Kohlbecker wrote:
> this is due to a LazyInitializationException occurring in the procession of the requests...
Andreas Müller
02:56 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
The pp synonyms should precede the misapplied names. Currently they come afterwards or the order is undefined. Andreas Müller
02:06 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
this is due to a LazyInitializationException occurring in the procession of the requests like:
http://160.45.63.17...
Andreas Kohlbecker
01:43 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
The same is true for euromed on test!! Andreas Müller
01:42 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
At least in cichorieae test (http://test.e-taxonomy.eu/dataportal/preview/cichorieae/admin/config/cdm_dataportal/sett... Andreas Müller
01:36 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Also, as symbol is not a required field, we may also think about fallbacks in case symbol is NULL.
E.g. (symbol !...
Andreas Müller
01:33 PM feature request #7417 (Feedback): Make pro parte and partial synonym relationships always visible...
The symbols are still used in incorrect direction. On the side of the "real" taxon (which takes the role of the toTax... Andreas Müller
04:37 PM bug #7516 (New): details view has to show empty page if bulk editor has no item selected
Katja Luther
04:37 PM task #7515 (New): TypeDesignationStatusComparator to sort by vocabulary first and then by term order

I stumbled over this when editing possibly invalid data with the Taxeditor:
Opening the "Details View" for a nam...
Andreas Kohlbecker
04:35 PM bug #7514 (New): Change direct and inverse symbol for pro parte synonym and misapplied name relat...
To have a consistent reading we need the current symbol to be the invers symbol as we show usually the inverse relati... Andreas Müller
04:35 PM Revision 9d6458e9 (taxeditor): ref #7439 disable auto-resize after search
Patrick Plitzner
04:35 PM Revision a4784593 (taxeditor): ref #7439 Add context menu to cell editor, disable editing
Patrick Plitzner
04:33 PM bug #4362: Some File->New dialogs do not work
do you know, why the specimen are removed from the new menu? Katja Luther
04:29 PM feature request #3534 (Duplicate): Predefine inreference type when adding the inreference to a su...
Katja Luther
04:29 PM feature request #3534: Predefine inreference type when adding the inreference to a subreference
this is already implemented, see #1606 Katja Luther
04:27 PM feature request #7508: Add language information to term representations
Andreas Kohlbecker wrote:
> LazyInitializationException occurring in the procession of the requests like:
>
> htt...
Andreas Müller
02:08 PM feature request #7508: Add language information to term representations
LazyInitializationException occurring in the procession of the requests like:
http://160.45.63.175/cdmserver/cich...
Andreas Kohlbecker
01:18 PM feature request #7508: Add language information to term representations
i think you can close it! Andreas Kohlbecker
12:58 PM feature request #7508: Add language information to term representations
Should we close the ticket? Andreas Müller
04:11 PM Revision 8360c0ff (taxeditor): fix #4101: getValue() was missing
Katja Luther
04:04 PM Revision 4899d396 (cdmlib): ref #7508 fix lazy loading exception for inverseRepresentations
Andreas Müller
04:00 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabu...
completed.
@a.mueller: please review my implementation
Andreas Kohlbecker
03:59 PM bug #7313 (Resolved): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all term...
Applied in changeset commit:cdm-vaadin|65d2936da23181f34fe6561dd4ae55c21c81d21b. Andreas Kohlbecker
12:51 PM bug #7313 (In Progress): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all t...
Andreas Kohlbecker
03:59 PM Revision 65d2936d (cdm-vaadin): fix #7313 adding kindOfUnit terms to new vocabulary
Andreas Kohlbecker
03:33 PM Revision 390d8116 (cdmlib): ref #7508 fix lazy loading exception for inverseRepresentations
Andreas Müller
03:32 PM Revision f6df4cfb (cdmlib): cleanup
Andreas Müller
02:29 PM Revision 64a28761 (cdm-vaadin): ref #7059 removing code to delete obsolete terms
Andreas Kohlbecker
02:26 PM Revision af047de6 (cdm-vaadin): fixing readonly state of SwitchableTextField
Andreas Kohlbecker
02:19 PM Revision 14d64fed (cdm-vaadin): ref #7364 fixing readonly state of NameRelationField
Andreas Kohlbecker
02:09 PM feature request #6659 (Closed): Show mediaCreated in dataportal
Works well. Andreas Müller
01:30 PM Revision cf8c950b (cdm-vaadin): ref #7458 fixing readonly state in FilterableAnnotationsField
Andreas Kohlbecker
12:55 PM feature request #7285 (Closed): Edaphobase import: implement ranks Cohort, Hyporder
I think this can be closed as long as no other feedback comes. Andreas Müller
12:43 PM bug #7220 (Worksforme): Permission Denied in readonly mode of TypeDesignationEditor
I can not reproduce this issue, it seems as if this has been fixed meanwhile. Andreas Kohlbecker
12:04 PM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Having the markers for deduplication (target, candidate) in the text fields is not very comf...
Andreas Müller
12:01 PM feature request #7439: Use NatTable for BulkEditor
Changing the text in a cell for now should not be possible until #7503 is implemented. If NAT tables don't offer such... Andreas Müller
11:58 AM feature request #7439: Use NatTable for BulkEditor
Using the standard right click menu is cumbersome as clicking on a column cell immediately changes the cell into the ... Andreas Müller
11:46 AM feature request #7439: Use NatTable for BulkEditor
Having the markers for deduplication (target, candidate) in the text fields is not very comfortable and scalable. Whe... Andreas Müller
11:37 AM feature request #7439 (Feedback): Use NatTable for BulkEditor
Andreas Müller
11:23 AM feature request #7513 (New): Proper user feedback on attempt to access unpublished taxon
Hi Andreas,

ich frage mich, ob wir die Anzeige für ein unpubliziertes Taxon noch verbessern können, falls doch ma...
Andreas Kohlbecker
11:13 AM Revision 65890142 (cdmlib): ref #7509 Implement service method for common parent taxon node + test
Patrick Plitzner
10:53 AM Revision 575d53ab (cdmlib): harmonizing controller logging
Andreas Kohlbecker
10:53 AM Revision 605181a2 (cdmlib): fixing failing suppression of inverseRepresentations
Andreas Kohlbecker
09:12 AM feature request #6321 (In Progress): Implement parallel loading + progress bar for loading object...
Move this to next milestone until it is reactivated Andreas Müller

06/25/2018

10:54 PM feature request #7458 (Resolved): Note field for TaxonName , NameType and SpecimenType editors
fully implemented and ready for the review Andreas Kohlbecker
10:53 PM Revision 2e814df1 (cdm-vaadin): ref #7458 implementation of the note field for the NameTypeEditor
Andreas Kohlbecker
10:26 PM Revision 782f192b (cdm-vaadin): ref #7458 implementation of the note field for the TypeSpecimenEd...
Andreas Kohlbecker
09:34 PM Revision 6a066197 (cdm-vaadin): ref #7458 solving generic type parameter problem in FilterableAnn...
Andreas Kohlbecker
07:14 PM feature request #7071: Reenable restore functionality
Upps, sorry, I see that this is not a master ticket. However, InProgress or New might still be the better status. Andreas Müller
07:13 PM feature request #7071: Reenable restore functionality
As this is a master ticket only should we switch from Feedback to InProgress? Suits better IMO. Andreas Müller
04:02 PM feature request #7071: Reenable restore functionality
Moving to the next release because it is not critical Patrick Plitzner
07:10 PM bug #7512: Saving in Specimen Tree View creates unwanted scrolling on windows
Please discuss who should be assignee. Maybe better KL as using windows. Andreas Müller
07:07 PM bug #7512 (New): Saving in Specimen Tree View creates unwanted scrolling on windows
Copy from #7418 and #7102
To reproduce the scrolling issue:
* Connect to test-rem_conf_am
* Open Specimen Tr...
Andreas Müller
07:09 PM bug #7418 (Closed): remaining specimen determination details view issues
As the scrolling issue is not related to determination details view I created a new ticket for this issue #7512 and r... Andreas Müller
04:00 PM bug #7418: remaining specimen determination details view issues
moving this to the next release as it is not critical Patrick Plitzner
12:07 PM bug #7418: remaining specimen determination details view issues
This behavior is not reproducable on a Linux machine. On Windows it happens when saving with the "Save" icon but it d... Patrick Plitzner
05:59 PM feature request #4363: Show more informative message for unsupported specimen structures in speci...
Now, a more informative message is shown. The text is generated in the DerivedUnitFacade constructor. It is interesti... Patrick Plitzner
05:55 PM feature request #4363 (Resolved): Show more informative message for unsupported specimen structur...
Applied in changeset commit:taxeditor|dcf98348abae2de24283207fddb7cb670c6028b6. Patrick Plitzner
05:55 PM Revision dcf98348 (taxeditor): fix #4363 Show more informative message in details view for specimen
Patrick Plitzner
05:41 PM Revision a2415b9f (cdm-vaadin): ref #7458 initial implementation of a note field at the example o...
Andreas Kohlbecker
04:17 PM bug #7079 (Closed): P2 updates not found
Patrick Plitzner
04:16 PM bug #7079: P2 updates not found
Patrick Plitzner wrote:
> @Andreas K.: Can you test this again. But you need to have a downloaded nightly build ...
Andreas Kohlbecker
03:59 PM bug #7079: P2 updates not found
The update did not work for after the release because of a wrong version tag due to the manual update script.
This...
Patrick Plitzner
04:02 PM feature request #7015: Migrate recent menu item
Moving to the next release because it is not critical Patrick Plitzner
03:51 PM feature request #7508: Add language information to term representations
The commits look good at first glance but I had no time to take an in depth look. Andreas Kohlbecker
03:31 PM Revision 01a4599b (taxeditor): ref #7439 increase size of id column
Patrick Plitzner
03:23 PM Revision fbdeccd7 (taxeditor): ref #7505, #6321 Update UI after bulk editor search + remove page ...
Patrick Plitzner
03:21 PM Revision e7314de8 (taxeditor): ref #7505, #6321 Enable max count check for bulk editor searches
Patrick Plitzner
03:16 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Parallel loading is temporarily deactivated. Fix for #7505 and update problem in name details view Patrick Plitzner
03:14 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
This problem came up with the parallel loading of the search results in the bulk editor. The CDM entities were not co... Patrick Plitzner
01:19 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Further potential examples
* all names with genus name "Alpha"
* Navicula adminensis A. Boudou & A.A.Gontsch.
...
Andreas Kohlbecker
03:09 PM Revision 28c922f7 (taxeditor): ref #7505, #6321 Disable parallel loading
- This caused problems with the session handling because the CDM
entities were not correctly loaded
Patrick Plitzner
01:12 PM bug #7511 (Duplicate): LazyInitializationException (LIE) opening Registration Workingset Editor
Andreas Kohlbecker
12:35 PM bug #7511 (Duplicate): LazyInitializationException (LIE) opening Registration Workingset Editor
opening the Registration Workingset Editor for
Braun, A., A new Psammothidium species (Bacillariophyta, Achnanthi...
Andreas Kohlbecker
12:59 PM Revision beb7ef65 (cdm-vaadin): ref #7331 re-introducing load to cirumvent bug
Andreas Kohlbecker
10:58 AM Revision 826d50b4 (taxeditor): i18n for bulk editor
Patrick Plitzner
10:55 AM Revision 2bbac2af (cdmlib): remove deprecated method TaxonService.getAllMedia
Andreas Müller
10:36 AM Revision ce3b4e95 (cdmlib): ref #7508 fix inverse L10n term representation
Andreas Müller
10:33 AM feature request #7510 (New): Allow entering aggregated/statistical data for single specimens in c...
For some specimens it may be practical to enter statistical data. This should also be possible within or from the cha... Patrick Plitzner
10:21 AM Revision d2540808 (cdmlib): ref #7509 Add service method for common parent taxon node
Patrick Plitzner
10:18 AM feature request #7509 (New): Aggregate and persist specimen character data from character matrix
Currently we only have a temporary aggregation row and the aggregated values are not persisted.
For persisting the...
Patrick Plitzner
 

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