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From 04/04/2019 to 05/03/2019

05/03/2019

06:14 PM Revision 5167fe82 (taxeditor): fix default feature tree for facts and name facts
Katja Luther
05:25 PM Revision 6e7032cb (taxeditor): Updated version in pom / project files to taxeditor version : 5.8.0-SNAPSHOT and cdmlib version : 5.8.0-SNAPSHOT
jenkins
05:25 PM Revision 0372da2d (taxeditor): Updated version in pom / project files to taxeditor version : 5.7.0 and cdmlib version : 5.7.0
jenkins
05:24 PM Revision 7986c14e (cdm-vaadin): jenkins bumping cdmlib.version to 5.7.0-SNAPSHOT
jenkins
05:24 PM Revision 76b0aad3 (cdm-vaadin): updating poms for 5.8.0-SNAPSHOT development
jenkins
05:24 PM Revision 5e563d74 (cdm-vaadin): updating poms for 5.7.0 branch with snapshot versions
jenkins
05:24 PM Revision 0ad93e72 (cdm-vaadin): jenkins bumping cdmlib.version to 5.8.0-SNAPSHOT
jenkins
05:24 PM Revision 0e81b6de (cdm-dataportal): updating poms for 5.8.0-SNAPSHOT development
jenkins
05:23 PM Revision 5b9eb17b (cdm-server): updating poms for 5.8.0-SNAPSHOT development
jenkins
05:21 PM Revision bc914c97 (cdmlib): updating poms for 5.8.0-SNAPSHOT development
jenkins
04:50 PM feature request #8182 (In Progress): show blast search result
Katja Luther
04:39 PM Revision 761d2335 (taxeditor): use uuid of namedAreas in propertyToLabelMap of distr editor
Katja Luther
04:38 PM feature request #8242 (Resolved): Implement filtered combo boxes for state selection in CharacterMatrix
move to 5.8 because still experimental Patrick Plitzner
04:22 PM feature request #8242 (Feedback): Implement filtered combo boxes for state selection in CharacterMatrix
As this is still experimental I think it is not necessary to review. I will review once the character matrix becomes ... Andreas Müller
10:27 AM feature request #8242 (Resolved): Implement filtered combo boxes for state selection in CharacterMatrix
Patrick Plitzner
04:34 PM feature request #8241 (Closed): Rename FeatureTreeEditor to TermTreeEditor
Patrick Plitzner
04:07 PM feature request #8241 (Feedback): Rename FeatureTreeEditor to TermTreeEditor
hmm, this doesn't make so much sense as long as in standard version only feature trees can be edited. However, as it ... Andreas Müller
11:07 AM feature request #8241 (Resolved): Rename FeatureTreeEditor to TermTreeEditor
Patrick Plitzner
03:45 PM Revision 0a9ff316 (cdmlib): cleanup
Andreas Müller
03:45 PM Revision 09ed14f5 (cdmlib): fix preference value length check in CdmPreference constructor. Adapt to new length
Andreas Müller
02:49 PM Revision 964b77e3 (taxeditor): disable details for distributions in distribution editor
Katja Luther
02:07 PM Revision bbca1d4e (taxeditor): correct subject syntax for area specific status
Katja Luther
01:04 PM Revision 4ca67a68 (taxeditor): minor in preferences
Katja Luther
12:43 PM Revision c35d4c4a (taxeditor): implement get(PrefKey) for exact match of key in preferenceCache
Katja Luther
12:43 PM Revision 20544ac1 (taxeditor): fix NPE
Katja Luther
12:04 PM bug #7223 (Feedback): ReferenceEditor: disable fields depending on the Reference type
Personal Communication has no DOI neither in the interfaces nor in TaxEditor. If this is available in vaadin this is ... Andreas Müller
11:40 AM bug #7223: ReferenceEditor: disable fields depending on the Reference type
"And I guess also for personal communication no DOI should be available." correct. Wolf-Henning Kusber
12:03 PM feature request #8255 (New): Unify ReferencePropertyDefinitions and reference interfaces
For details see https://dev.e-taxonomy.eu/redmine/issues/7223#note-28 and before.
To avoid inconsistent behavior w...
Andreas Müller
11:58 AM Revision d4afb9f7 (cdmlib): ref #8242 Ensure order of TermDTO query
Patrick Plitzner
11:41 AM bug #8254 (New): Add term information to state dropdown in CharacterMatrix
Copied from #8242:
Additionally, we should think about adding tooltips with the description (and also image) of th...
Patrick Plitzner
11:40 AM feature request #8248: Implement OWL import
Moving to 5.8 because still experimental Patrick Plitzner
10:29 AM feature request #8248 (Resolved): Implement OWL import
Patrick Plitzner
11:39 AM Revision 6393aae0 (taxeditor): ref #8248 Make OWL import experimental
Patrick Plitzner
11:37 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title
Correct: "Iconographia Diatomologica. 23" is absolutely necessary to identify the book. For my understanding the "pr... Wolf-Henning Kusber
11:30 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title
By the way, this part of the description to me seems incorrect: Expected titleCache is: "Taxonomy - biogeography - di... Andreas Müller
11:28 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title
As described in https://dev.e-taxonomy.eu/redmine/issues/7223#note-19 the print series is meant only for grouping not... Andreas Müller
11:32 AM Revision de022d06 (taxeditor): ref #7589 Temporarily disable auto-aggregation
- will probably be completely removed in future Patrick Plitzner
11:23 AM Revision b1b7be74 (taxeditor): ref #7920: adaptions for changing PreferenceCache
Katja Luther
11:23 AM Revision f42afea1 (taxeditor): adapt preferenceCache for same predicate but different subject
Katja Luther
11:23 AM Revision 89a2873b (taxeditor): use PreferencePredicate for exportDestinationWizard
Katja Luther
11:03 AM Revision 18d607f4 (taxeditor): ref #8241 Rename FeatureTreeEditor to TermTreeEditor
Patrick Plitzner
10:43 AM Revision 2c4c870d (taxeditor): ref #7920: predicate for area specific status pref is the same as for the general pref
Katja Luther
10:25 AM bug #7896: NPE, NullPointerException in RelationshipTermBase
This belongs to 5.6 if fixed, otherwise should be set to Feedback. Please review. Andreas Müller

05/02/2019

06:06 PM Revision 755244f7 (cdmlib): Fix term creation for multiple representations
Patrick Plitzner
05:56 PM Revision 13fd7107 (cdmlib): Add constructor for term type only
Patrick Plitzner
05:19 PM Revision 0d76fc7e (taxeditor): Adapt to cdmlib renaming
Patrick Plitzner
04:07 PM Revision f1f3f9e9 (cdmlib): Fix owl structure tree import test
Patrick Plitzner
03:06 PM Revision 90096ce9 (taxeditor): handle terms without idInVoc in NomenclaturalStatusType comparator
Katja Luther
01:55 PM feature request #8253 (Closed): Authors for genus autonyms
ERS:
den Autor bei infragenerischen Taxa hinter den gesamten Namen zu stellen, wie jetzt in Euro+Med, ist mit Sich...
Andreas Müller
12:41 PM Revision 1f49f91e (cdmlib): Rename Owl import/export to StructureTreeOwl import/export
Patrick Plitzner

05/01/2019

07:24 PM bug #8252: reference ellypsis must not be applied to all reference types
"It is also possible to skip the ellipsis completely in this case some titles could exceed the given space, though.
...
Wolf-Henning Kusber

04/30/2019

11:12 PM bug #8252 (Feedback): reference ellypsis must not be applied to all reference types
> All Titles are given fully up to a length of approx. 60 characters.
>
> This is okay (i) because the the title ca...
Andreas Kohlbecker
09:05 PM bug #8252: reference ellypsis must not be applied to all reference types
All Titles are given fully up to a length of approx. 60 characters.
This is okay (i) because the the title can be ...
Wolf-Henning Kusber
07:53 PM bug #8252 (Resolved): reference ellypsis must not be applied to all reference types
done! please review. Andreas Kohlbecker
03:22 PM bug #8252: reference ellypsis must not be applied to all reference types
reference title cache ellypsis must not be applied to:
Book series
Journal
Proceedings
i.e. all standardised inv...
Wolf-Henning Kusber
03:13 PM bug #8252: reference ellypsis must not be applied to all reference types
I think the same accounts for book series etc.
the reference title cache ellypsis must not be applied to all refer...
Andreas Kohlbecker
03:09 PM bug #8252 (Closed): reference ellypsis must not be applied to all reference types
![](picture551-1.png)
Journal titles in dropdown list in reference editor must not be truncated.
How to different...
Wolf-Henning Kusber
11:10 PM bug #8250 (Closed): ReferenceEditor: inReference must not be required for type book
Andreas Kohlbecker
09:12 PM bug #8250: ReferenceEditor: inReference must not be required for type book
The bug is fixed, input of books with and without series can be done and saved.
This ticket can be closed.
That...
Wolf-Henning Kusber
03:30 PM bug #8250: ReferenceEditor: inReference must not be required for type book
please review Andreas Kohlbecker
03:30 PM bug #8250 (Resolved): ReferenceEditor: inReference must not be required for type book
Applied in changeset commit:cdm-vaadin|80e7f7818a45beba837dadf4ef75837053efe2f0. Andreas Kohlbecker
11:09 PM bug #8251 (Closed): LazyInitializationException (LIE) in featureTree webservice
works now as expected Andreas Kohlbecker
12:41 PM bug #8251: LazyInitializationException (LIE) in featureTree webservice
please review Andreas Müller
12:40 PM bug #8251 (Resolved): LazyInitializationException (LIE) in featureTree webservice
Applied in changeset commit:cdmlib|7d02ee2f5d18a659ae3baf758b8a6010af5004d5. Andreas Müller
12:38 PM bug #8251 (In Progress): LazyInitializationException (LIE) in featureTree webservice
Andreas Müller
12:37 PM bug #8251: LazyInitializationException (LIE) in featureTree webservice
I think I found the problem and can fix it Andreas Müller
11:33 AM bug #8251 (Closed): LazyInitializationException (LIE) in featureTree webservice
example request : http://api.cybertaxonomy.org/cichorieae/portal/featureTree.json?pageNumber=0&pageSize=500 Andreas Kohlbecker
08:44 PM feature request #8193: TaxonNamePopupEditor: add select form element for Nomenclatural status
Thanks for the implementation
Tested with one and two status, entering and saving without problems, fine.
...but i...
Wolf-Henning Kusber
07:53 PM feature request #8193: TaxonNamePopupEditor: add select form element for Nomenclatural status
ready to be reviewed. Andreas Kohlbecker
03:06 PM feature request #8193 (Resolved): TaxonNamePopupEditor: add select form element for Nomenclatural status
Applied in changeset commit:cdm-vaadin|0aa1233b1d58610d498e17aeb13858211d09d49b. Andreas Kohlbecker
07:54 PM bug #8220 (Closed): incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
Andreas Kohlbecker
03:06 PM bug #8220: incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
All issues are solved.
New issue seen: truncation of journal titles -> new ticket.
Wolf-Henning Kusber
09:03 AM bug #8220: incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
I solved all remaining issues, please review again. Andreas Kohlbecker
07:47 PM Revision 4724d189 (cdmlib): ref #8252 improving ReferenceEllypsisFormatter for print series and proceedings
Andreas Kohlbecker
04:15 PM Revision 6efa5535 (cdmlib): ref #8252 improving ReferenceEllypsisFormatter for journals and other references where the main information is in the title
Andreas Kohlbecker
03:30 PM Revision 80e7f781 (cdm-vaadin): fix #8250 RegistrationEditor inReference required only for Article Section BookSection InProceedings
Andreas Kohlbecker
03:06 PM Revision 0aa1233b (cdm-vaadin): fix #8193 ElementCollectionField to edit nomenclatural status in TaxonNamePopupEditor
Andreas Kohlbecker
03:05 PM Revision 3215b084 (cdmlib): ref #8193 collection setter for TaxonName.status
Andreas Kohlbecker
12:40 PM Revision 7d02ee2f (cdmlib): fix #8251 fix property path for FeatureTreeListController
Andreas Müller
12:40 PM Revision 44164d9c (cdmlib): cleanup
Andreas Müller
08:40 AM Revision f0664483 (taxeditor): search preference cache for prefKey
Katja Luther

04/29/2019

07:15 PM Revision 11c586f4 (cdmlib): minor cleanup
Andreas Müller
06:42 PM Revision 370b41a7 (cdmlib): Update OwlImportTest. Use ClearDBDatSet instead of ClearDataSet. Still failing.
Andreas Müller
05:01 PM Revision cca5f235 (cdm-vaadin): ref #8220 editing exististing names for new regitration: citation detail enabled, section only restriction disabled
Andreas Kohlbecker
04:25 PM Revision 47d72e63 (taxeditor): minor
Katja Luther
04:06 PM Revision 464346c5 (cdmlib): removing debuging code line
Andreas Kohlbecker
04:05 PM feature request #7965: Registration search simplify type select options
please review once the test server is updated Andreas Kohlbecker
04:04 PM feature request #7965 (Resolved): Registration search simplify type select options
Applied in changeset commit:cdm-vaadin|4656c3e23541b17c233d565d4ff02c0053b335f2. Andreas Kohlbecker
04:04 PM Revision 4656c3e2 (cdm-vaadin): fix #7965 using the TypeDesignationStatusFilter elements to simplify the type filter select
Andreas Kohlbecker
04:03 PM Revision 72312cbc (cdmlib): ref #7965 methods to get typeDesignationStatusInUse as term an as filter object
Andreas Kohlbecker
03:48 PM Revision 71952c4c (cdmlib): Fix OWL test package structure
Patrick Plitzner
02:45 PM feature request #3616: Show DescriptionElementBase.timeperiod in Dataportals
As there is the follow up ticket in 5.7 I move this back to 5.6 as the current implementation was done in 5.6 Andreas Müller
02:28 PM Revision ebc7f626 (cdmlib): try to fix test
Andreas Müller
02:18 PM Revision 51c97aab (cdmlib): revert changes in PrefKey
Katja Luther
01:55 PM Revision 21490833 (taxeditor): minor
Katja Luther
01:52 PM Revision f6cdd5da (cdmlib): rename getUuidAndTitleCache for namedAreas
Katja Luther
01:11 PM Revision 833d4759 (taxeditor): minor
Andreas Müller
12:48 PM Revision da04c055 (taxeditor): ref #7920: add handlers and wizards for area specific status preference selection
Katja Luther
12:46 PM Revision 5e1dc099 (taxeditor): ref #7920: add area specific status preference in distribution editor
Katja Luther
12:30 PM Revision 11e0d1a5 (cdmlib): minor
Katja Luther
12:20 PM Revision 467c872e (cdmlib): ref #7920: add predicate for area specicific status
Katja Luther
10:11 AM Revision 4fee3487 (taxeditor): Save edited character in FeatureTreeEditor
Patrick Plitzner

04/26/2019

08:34 PM bug #8250 (Closed): ReferenceEditor: inReference must not be required for type book
![](picture244-1.png)
Reference type Article is perfect (100 % Articles in journal)
Bug in reference type = Boo...
Wolf-Henning Kusber
07:56 PM bug #8220: incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
![](picture084-1.png)
1. Selection of a existing reference is possible
2. Entering a reference detail is not perm...
Wolf-Henning Kusber
12:01 PM bug #8220: incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
solved, please review Andreas Kohlbecker
10:37 AM bug #8220 (Resolved): incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
Applied in changeset commit:cdm-vaadin|6ffb5f981a96c47c5b94d152eb59e33423c7d431. Andreas Kohlbecker
07:51 PM feature request #8215 (Closed): User demand: sorting order in reference editor
Andreas Kohlbecker
07:15 PM feature request #8215: User demand: sorting order in reference editor
I tested the respective case. The problem is perfectly solved. The ticket can be closed Wolf-Henning Kusber
11:08 AM feature request #8215: User demand: sorting order in reference editor
I also worked on the persons and teams please review again Andreas Kohlbecker
06:33 PM Revision 75e53727 (cdmlib): ref #8209 avoiding LIEs when using the ReferenceEllypsisFormatter
Andreas Kohlbecker
05:29 PM bug #8205: SpecimenTypeDesignationsEditor: First selection of mediaReference gets lost
When I copy the reference detail into the respective field, I can select the reference and save it. Than the referenc... Wolf-Henning Kusber
03:30 PM bug #8205: SpecimenTypeDesignationsEditor: First selection of mediaReference gets lost
This problem could disappear when turning the list editor in to a data grid as planned anyway. Andreas Kohlbecker
03:18 PM bug #8205: SpecimenTypeDesignationsEditor: First selection of mediaReference gets lost
This is a tough nut to crack, since this appens only for the mediaReference field.
There is no obvious difference...
Andreas Kohlbecker
04:47 PM Revision 6809dc22 (cdmlib): ref #8248 Add term representations to OWL import and export and test
Patrick Plitzner
04:45 PM Revision ae7405db (cdmlib): ref #8248 Add constructor for term with a set of representations
Patrick Plitzner
03:32 PM Revision 866975ac (cdm-vaadin): ref #8205 clening up: removing duplicate application of the ReferenceEllypsisCaptionGenerator and minor cleaning
Andreas Kohlbecker
02:36 PM Revision 2c8759bb (cdm-vaadin): ref #8209 avoiding LIEs when using the ReferenceEllypsisFormatter
Andreas Kohlbecker
12:10 PM Revision aef8731c (taxeditor): ref #8248 Implement OWL import wizard
Patrick Plitzner
12:02 PM Revision 49b1f2d4 (cdmlib): ref #8248 Ready OWL import for taxeditor usage
Patrick Plitzner
11:51 AM Revision d3a37851 (cdm-vaadin): ref #8220 fixing NPE
Andreas Kohlbecker
10:46 AM Revision 7a5312a7 (cdm-vaadin): ref #8215 using match mode BEGINNING for all AgentBase paging providers, also centralizing the construction
Andreas Kohlbecker
10:31 AM Revision 6ffb5f98 (cdm-vaadin): fix #8220 TaxonNamePopupEditor to review or complete the exiting name to be registered
Andreas Kohlbecker
10:30 AM bug #8246 (Closed): TaxonNamePopupEditor can not be canceled
Andreas Kohlbecker
09:59 AM Revision e8e9ccfa (taxeditor): ref #8248 Split import wizard page
Patrick Plitzner

04/25/2019

04:04 PM feature request #8215: User demand: sorting order in reference editor
User demand: sorting should be "begins with" not implemented. Sorting as shown on the screen shot. Wolf-Henning Kusber
01:15 PM feature request #8215: User demand: sorting order in reference editor
done! Please test if the behavior is acceptable now. Andreas Kohlbecker
01:14 PM feature request #8215 (Resolved): User demand: sorting order in reference editor
Applied in changeset commit:cdm-vaadin|5acf0504225e0f34e55b4eba216c3e1f8d2edea1. Andreas Kohlbecker
03:17 PM Revision 9d423016 (cdm-vaadin): improving DelegatingErrorHandler
Andreas Kohlbecker
02:50 PM bug #8246: TaxonNamePopupEditor can not be canceled
Test system:
Record with invalid (missing genus) data, cancled, deleted after intended saving, deleted.
Different...
Wolf-Henning Kusber
01:19 PM bug #8246: TaxonNamePopupEditor can not be canceled
please review Andreas Kohlbecker
02:21 PM Revision 95b8352b (cdmlib): ref #8248 Enhance OWL import
- Add term URI to import
- add sources to imported terms
- create term vocabulary for imported terms
- check for a...
Patrick Plitzner
02:18 PM Revision 898b8fa6 (cdmlib): ref #8248 Add URI to OWL export
Patrick Plitzner
02:17 PM Revision 21e9de24 (cdmlib): Fix potential NPE
Patrick Plitzner
02:17 PM Revision 2336c424 (cdmlib): ref #8248 Add service method to find terms by URI
Patrick Plitzner
01:23 PM bug #6766: maven profile to build cdm-vaadin for production purposes
see comment at `eu.etaxonomy.cdm.addon.config.CdmVaadinConfiguration.CdmVaadinServlet` Andreas Kohlbecker
01:14 PM Revision 5acf0504 (cdm-vaadin): fix #8215 changing default match mode for reference paging provider to BEGINNING
Andreas Kohlbecker
11:53 AM task #8209: use ellypsed references for all reference comboboxes
please test all editors with reference comboboxes. Andreas Kohlbecker
11:52 AM task #8209 (Resolved): use ellypsed references for all reference comboboxes
Applied in changeset commit:cdm-vaadin|3f3399518baa1655730b5753300d451b668bd330. Andreas Kohlbecker
11:52 AM Revision 3f339951 (cdm-vaadin): fix #8209 using ReferenceEllypsisFormatter for all Reference comboboxes
Andreas Kohlbecker
10:07 AM bug #8184 (Closed): SpecimenTypedesignationEditor: add new specimen broken Chrome browser
Andreas Kohlbecker
09:59 AM bug #8184 (Resolved): SpecimenTypedesignationEditor: add new specimen broken Chrome browser
No Problems in Chrome browser. Specimens can be saved, references can be selected. Ticket can be closed. Wolf-Henning Kusber
09:10 AM Revision dd4e5f4b (cdmlib): ref #8248 Implement OWL import test
Patrick Plitzner
09:09 AM Revision 9f6a7d35 (cdmlib): Remove limitation for FeatureTree.getDistinctFeatures() to only features
Patrick Plitzner
08:38 AM Revision 01800302 (cdmlib): ref #8248 Implement OWL import
- add more properties to export
- create complete FeatureTree during import
Patrick Plitzner

04/24/2019

02:54 PM Revision acd5f27e (cdm-vaadin): ref #8214 minor cleanup and improving a TODO comment
Andreas Kohlbecker
02:52 PM bug #8214 (Closed): WeaklyRelatedEntityCombobox is not validated
closing issue after copying the additional requirement to a new ticket #8249. The solution for this additional requir... Andreas Kohlbecker
02:34 PM bug #8249 (New): WeaklyRelatedEntityCombobox: validation of isRequired should only happen after user interaction
WeaklyRelatedEntityCombobox which are required should not be set invalid immediately, only after user interaction
...
Andreas Kohlbecker
01:01 PM bug #8184 (Feedback): SpecimenTypedesignationEditor: add new specimen broken Chrome browser
I tested with the the latest version of the Google Chrome Browser on Mac and on Windows 10 and had no problems.
He...
Andreas Kohlbecker
12:16 PM Revision d1ca5c99 (cdmlib): ref #8248 Implement OWL import
- add framework classes Patrick Plitzner
12:16 PM Revision 1933a33c (cdmlib): ref #8242 Add service method to get all terms for multiple vocabularies
Patrick Plitzner
12:14 PM feature request #8248 (In Progress): Implement OWL import
Patrick Plitzner
12:12 PM Revision 9b0a1cb8 (taxeditor): ref #8242 Load all supported states with one service call
Patrick Plitzner
12:06 PM bug #8227 (Worksforme): PhycoBank UI and Safari
successfully tested on
* Mac OS 10.10.5 with Safari 10.1.2
* Mac OS 10.14.1 with Safari 12.0.1
I will close th...
Andreas Kohlbecker
11:45 AM bug #8246 (Resolved): TaxonNamePopupEditor can not be canceled
Applied in changeset commit:cdm-vaadin|7095e8e36a979a24f37d9013e389ea64ac9a9cbe. Andreas Kohlbecker
11:44 AM bug #8246: TaxonNamePopupEditor can not be canceled
in contrast to the original assumption this issue has nothing to do with invalid fields. Andreas Kohlbecker
11:45 AM Revision 7095e8e3 (cdm-vaadin): fix #8246 fixing handling of CANCEL events of TaxonNameEditors in the RegistrationWorkingsetPresenter
Andreas Kohlbecker
10:48 AM Revision 14676ea5 (cdmlib): getUuidAndTitleCache for namedAreas with voc restriction
Katja Luther
10:21 AM Revision e4fb586a (cdm-vaadin): changing label 'Super-Collection' to 'In collection'
Andreas Kohlbecker
09:45 AM bug #8247 (New): Webservice redlist CSV Export broken
The drupal module "CDM CSV Export" is no longer working
Issues:
1. the module uses GET, the web service only ac...
Andreas Kohlbecker
08:32 AM bug #8231 (Feedback): Name relation non
What do you want me do to about this?
I understand that there are two problems:
1. The output of replaced synon...
Andreas Kohlbecker

04/23/2019

05:59 PM bug #7953: Book in BookSeries: incomplete titleCache misses series title
please can you handle this issue with high priority? It is quite important for phycobank since we are frequently havi... Andreas Kohlbecker
05:28 PM bug #8246 (Closed): TaxonNamePopupEditor can not be canceled
The attempt to cancel editing a TaxonNamePopupEditor with missing genus fails and ends up with corrupted form:
![]...
Andreas Kohlbecker
04:21 PM feature request #8245 (Closed): Improve representation of DescriptionElementBase.timeperiod
The formatting 2017-00-00 to 2018-00-00 is not nice. Having only a year or a year and a month but no day is a very co... Andreas Kohlbecker
04:19 PM feature request #3616 (Closed): Show DescriptionElementBase.timeperiod in Dataportals
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
>
> Can we still try to remove these trailing zeros (only for t...
Andreas Kohlbecker
04:15 PM bug #7106 (Closed): avoid factory.openSession() in CdmRepository
Andreas Kohlbecker
04:13 PM bug #8050 (Feedback): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
I cannot reproduce the problems mentioned in comment 12 and 13.
Andreas Kohlbecker
03:55 PM feature request #8173 (Closed): spring profile remoting enabled by default
remoting switch `-Dspring.profiles.active=remoting` removed from all server configurations and from documentation Andreas Kohlbecker
03:42 PM bug #8188 (Closed): Allow configuring hibernate properties via properties file
tested by running the selenide test class eu.etaxonomy.cdm.vaadin.ui.RegistrationUiTest Andreas Kohlbecker
03:18 PM Revision 130bdaf8 (cdmlib): adding workbench.xmi to ignores
Andreas Kohlbecker
01:08 PM bug #8217 (Closed): ToManyRelatedEntitiesComboboxSelect edit button not enabled
new ticket #8244 Andreas Kohlbecker
12:16 PM bug #8217 (Resolved): ToManyRelatedEntitiesComboboxSelect edit button not enabled
Andreas Kohlbecker
01:08 PM bug #8244 (New): Skip validation of ToManyRelatedEntitiesComboboxSelect when editor is read only
copied from #8217 Andreas Kohlbecker
12:22 PM task #7935 (Closed): Discuss new solution to establish the communication between submitter and curator
noting to add to this issue. The email based communication is a proper solution for the time being. Andreas Kohlbecker

04/18/2019

01:30 PM Revision 7cc57f1d (taxeditor): ref #8242 Refactor states to use DTOs
Patrick Plitzner
01:25 PM Revision 03762d0f (cdmlib): ref #8242 Pass list of States to row wrapper
Patrick Plitzner
01:24 PM Revision 581deb02 (cdmlib): ref #8242 Add service method to get all terms for a given vocabulary
Patrick Plitzner

04/16/2019

05:57 PM Revision 3c975f4d (cdmlib-apps): E+M improve occurrence import for nameInSource
Andreas Müller
05:54 PM Revision 0f7eb9e3 (cdmlib-apps): E+M error handling for ref or name without author
Andreas Müller
05:53 PM Revision 8c15d8b3 (cdmlib-apps): minor logging for team IDs
Andreas Müller
05:51 PM Revision c24aec69 (cdmlib-apps): update E+M handling in area vocabulary for Kosovo
Andreas Müller
04:10 PM feature request #8009 (Rejected): Check if Nebula TextAssist can be used to select categorical data in CharacterMatrix
NatCombo already offers this functionality -> #8242 Patrick Plitzner
04:03 PM Revision baf7d6f0 (taxeditor): ref #8242 Show dropdown filter for categorical data
Patrick Plitzner
03:56 PM Revision 5decc8b9 (taxeditor): ref #8242 Set max items for dropdown to 10 + sort items
Patrick Plitzner
11:48 AM bug #8243 (Resolved): Cdm Cache uses a lot of disk space
Recently Tilo experienced a sudden system freeze when his main partition went from ~3GB free disk space to 100% full ... Patrick Plitzner

04/15/2019

09:57 PM Revision 3dc19a32 (cdm-server): Merge branch 'release/5.6.0' into develop
jenkins
09:57 PM Revision 38218b23 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
09:56 PM Revision 895f6e8f (cdm-server): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
05:18 PM Revision 6e99af49 (cdm-server): Merge branch 'release/5.6.0' into develop
jenkins
05:18 PM Revision a54dfbdb (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
05:17 PM Revision 03304e86 (cdm-server): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
05:17 PM Revision 5b7d0ee8 (cdm-webapp): Merge branch 'release/5.6.0' into develop
jenkins
05:17 PM Revision 4bc1f747 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
05:17 PM Revision d3743a8e (cdm-webapp): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
05:17 PM Revision 464a4609 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.6.0
jenkins
05:16 PM Revision a33112a1 (cdm-vaadin): Merge branch 'release/5.6.0' into develop
jenkins
05:16 PM Revision f03092a8 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
05:13 PM Revision d486e66b (cdm-vaadin): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
05:13 PM Revision 03490ec3 (cdm-vaadin): jenkins bumping cdmlib.version to 5.6.0
jenkins
05:12 PM Revision 4582d197 (cdm-dataportal): Merge branch 'release/5.6.0' into develop
jenkins
05:12 PM Revision 275e327c (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
05:12 PM Revision 2c0d7354 (cdm-dataportal): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
05:12 PM Revision a8539daa (cdm-dataportal): release-preparation: production level css
jenkins
04:26 PM Revision d741ab8f (taxeditor): Merge branch 'release/5.6.0' into develop
jenkins
04:25 PM Revision 44803ab4 (taxeditor): Merge branch 'release/5.6.0'
jenkins
04:24 PM Revision 4defa98c (cdm-dataportal): Merge branch 'release/5.6.0' into develop
jenkins
04:24 PM Revision cc0eb3e5 (cdm-dataportal): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
04:24 PM Revision f01e2586 (cdm-dataportal): release-preparation: production level css
jenkins
04:24 PM Revision 0ede5bad (cdm-vaadin): Merge branch 'release/5.6.0' into develop
jenkins
04:24 PM Revision 64dcb6e8 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
04:20 PM Revision a99b7050 (cdm-vaadin): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
04:20 PM feature request #8242 (Closed): Implement filtered combo boxes for state selection in CharacterMatrix
~~Right now the dropdown for categorical states in CharacterMatrix is not scrollable which is a problem for large sta... Patrick Plitzner
04:20 PM Revision f25c9ddc (cdm-vaadin): jenkins bumping cdmlib.version to 5.6.0
jenkins
04:19 PM Revision 8c393c2b (cdmlib): Updating develop poms back to pre merge state
jenkins
04:19 PM Revision ce86a2cd (cdmlib): Merge branch 'master' into develop
jenkins
04:19 PM Revision 08b948de (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
04:19 PM Revision adf890df (cdmlib): Merge branch 'release/5.6.0'
jenkins
04:02 PM Revision cae60551 (cdmlib): updating poms for branch'release/5.6.0' with non-snapshot versions
jenkins
03:54 PM Revision b0a2bd43 (cdmlib): Merge branch 'develop' into release/5.6.0
Patrick Plitzner
03:53 PM Revision dfce3d2a (cdmlib): ref #7865 Add move message to protected title caches
Patrick Plitzner
03:53 PM Revision 51bf4258 (cdmlib): ref #7865 Fix description label generation when moving
Patrick Plitzner
03:53 PM Revision e600002d (cdmlib): ref #8233 Add barcode and catalog number to clone type service method
Patrick Plitzner
03:53 PM Revision 96d5c290 (cdmlib): Revert "ref #7865 Fix titleCache generation when moving taxon descriptions"
This reverts commit 48c401d490b010f21c5e6718263236b99a12d3cb. Patrick Plitzner
03:53 PM Revision 6b6f0d91 (cdmlib): ref #8234 Remove description element when moving it
Patrick Plitzner
03:53 PM Revision 6b528faf (cdmlib): ref #7865 Fix titleCache generation when moving taxon descriptions
Patrick Plitzner
03:53 PM Revision 842fe776 (cdmlib): Convert more service methods to only use UUID
- fix creation service method Patrick Plitzner
03:53 PM Revision 20d9726e (cdmlib): Convert service methods to only use UUID
Patrick Plitzner
03:53 PM Revision dd834f23 (cdmlib): ref #8124: adapt TaxonNameDescriptionDefaultCacheStrategy
Katja Luther
03:53 PM Revision 94dd2a5d (cdmlib): ref #8088: avoid NPE in saveTaxonNode
Katja Luther
03:53 PM Revision 3412cfed (cdmlib): ref #8096: smaller changes for update caches
Katja Luther
03:53 PM Revision abaef8e2 (cdmlib): add test for adding member to group
Katja Luther
03:53 PM Revision 3e404885 (cdmlib): ref #6413 Replace service method parameters with UUIDs
Patrick Plitzner
03:53 PM Revision b06cbc98 (cdmlib): deprecate isNomenclaturallyRelevant
Andreas Müller
03:53 PM Revision ad547405 (cdmlib): javadoc for DefaultMatchStrategy
Andreas Müller
03:53 PM Revision acca70b5 (cdmlib): ref #8088: fix LIE in saveTaxonNode
Katja Luther
03:53 PM Revision 4e55f365 (cdmlib): ref #8153 adapt ColumnAdder and ColumnTypeChanger to handle NOT NULL correctly for auditing tables
Andreas Müller
03:53 PM Revision c98bdf84 (cdmlib): ref #8189 fallback method for getCdmHomeSubDir() and fixing bug in getCdmHomeDirFallback()
Andreas Kohlbecker
03:53 PM Revision 9d2efe36 (cdmlib): ref #8189 fixing invalid NULL check
Andreas Kohlbecker
03:53 PM Revision 06374015 (cdmlib): ref #8189 removing useless trailing slashes
Andreas Kohlbecker
03:53 PM Revision 6446e75b (cdmlib): toString() method for RegistrationWorkingSet
Andreas Kohlbecker
03:53 PM Revision 2246f50e (cdmlib): ref #8115: adapt test
Katja Luther
03:53 PM Revision 949cf38a (cdmlib): ref #7433: add controller method to get dnaSample for given geneticAccessionnumber
Katja Luther
03:53 PM Revision cfe73b31 (cdmlib): ref #8115: do not delete description when moving the last element
Katja Luther
03:53 PM Revision 69e38fad (cdmlib): ref #8096: minor
Katja Luther
03:53 PM Revision a310bd6a (cdmlib): ref #8190 Fix termType in FeatureNode creation
Patrick Plitzner
03:53 PM Revision 817222b9 (cdmlib): ref #7700:smaller changes in TypeDesignationManager (add fide citation)
Katja Luther
03:53 PM Revision cbcf7126 (cdmlib): revert controller method in OccurenceListController
Katja Luther
03:53 PM Revision 5a8348a3 (cdmlib): adapt ConfigFileUtils to handle file access without appllication context
Katja Luther
03:53 PM Revision f13e7d56 (cdmlib): ref #7433: add controller method to get dnaSample for given geneticAccessionnumber
Katja Luther
03:53 PM Revision 1e965c67 (cdmlib): ref #7515: TypedesignationStatusComparator inherit from OrderedTermComparator
Katja Luther
03:53 PM Revision ebd1ecaf (cdmlib): ref #8189 providing fallback method to retrieve the ~/.cdmLibrary folder without application context
Andreas Kohlbecker
03:53 PM Revision 56aa4a44 (cdmlib): ref #7920: add new predicate for per area status preferences
Katja Luther
03:53 PM Revision 48c2d522 (cdmlib): Fix potential NPE
Patrick Plitzner
03:53 PM Revision 9f74bfb3 (cdmlib): comments and doc for IRegistrationService
Andreas Kohlbecker
03:53 PM Revision 56d71c15 (cdmlib): ref #8188 adding empty hibernate.properties for main to satisfy PropertiesFactoryBean in production mode
Andreas Kohlbecker
03:53 PM Revision e25f9c08 (cdmlib): ref #8189 better reporting of error conditions in AbstractWebApplicationConfigurer
Andreas Kohlbecker
03:53 PM Revision 905b0c5e (cdmlib): minor
Andreas Müller
03:53 PM Revision 4c066b3c (cdmlib): fix bug in term type check
Andreas Müller
03:53 PM Revision 096053c1 (cdmlib): fix term type check in FeatureNode
Andreas Müller
03:53 PM Revision 73ecd0be (cdmlib): Revert "Remove useless check"
This reverts commit 1a4fdfe5c12c655451e25c567f656a8df0f1b9a5. Andreas Müller
03:53 PM Revision 85c43271 (cdmlib): minor changes in TermLoader
Andreas Müller
03:53 PM Revision 94aa8075 (cdmlib): ref #8189 DataSourceConfigurer @Autowiring ConfigFileUtil to init this bean before
Andreas Kohlbecker
03:53 PM Revision e9879222 (cdmlib): ref #8189 DataSourceConfigurer using ConfigFileUtil correctly
Andreas Kohlbecker
03:53 PM Revision 429da4fe (cdmlib): ref #8190 Fix potential NPE
Patrick Plitzner
03:53 PM Revision 78e019b6 (cdmlib): ref #8189 cdmlib-remote.properties as not required property source fixes bug introduced in 9b55e525
Andreas Kohlbecker
03:53 PM Revision 6d3f348c (cdmlib): upgrading jetty-maven-plugin to 9.4.15.v20190215
Andreas Kohlbecker
03:53 PM Revision 6d27d83c (cdmlib): ref #8189 removing unnecessary dependency from cdmlib-commons
Andreas Kohlbecker
03:53 PM Revision 2ef11fec (cdmlib): Remove useless check
Patrick Plitzner
03:53 PM Revision 2588dae5 (cdmlib): ref #8190 Allow sub term types for FeatureNode relations and trees
Patrick Plitzner
03:53 PM Revision 69056744 (cdmlib): ref #8189 ConfigFileUtil as spring bean in deafult context and tests implemented
Andreas Kohlbecker
03:53 PM Revision 657ed46c (cdmlib): ref #8189 moving method getFolderSeperator() back to CdmUtils
Andreas Kohlbecker
03:53 PM Revision 98bb24f8 (cdmlib): ref #8189 moving ConfigFileUtil and AccountStore to cdmlib-persistence:eu.etaxonomy.cdm.config
Andreas Kohlbecker
03:53 PM Revision 03d51e97 (cdmlib): ref #8189 moving folder funstins from CdmUtils to ConfigFileUtil
Andreas Kohlbecker
03:53 PM Revision 508c257d (cdmlib): ref #8189 CdmUtils uses the spring environment to find user.home
Andreas Kohlbecker
03:53 PM Revision 848968ba (cdmlib): ref #7356 upgrading goggle guava to 23.0 to conform to seleninde dependency which is used in cdm-vaadin
Andreas Kohlbecker
03:53 PM Revision 8930dd5b (cdmlib): removing test method
Andreas Kohlbecker
03:53 PM Revision 7c0edc2e (cdmlib): ref #8188 configurable.xml loads hibernate properties from src/test/resources/hibernate.properties - cdmlib
Andreas Kohlbecker
03:53 PM Revision 9659ae17 (cdmlib): ref #7356 avoiding spring bean dependency cycle by adding @Lazy
Andreas Kohlbecker
03:53 PM Revision d56d4eab (cdmlib): ref #7356 throwing RuntimeException in case of severe web application misconfiguration instead of just logging
Andreas Kohlbecker
03:53 PM Revision 7bcbf7dc (cdmlib): ref #8058: add commonNameLanguage to PreferencePredicate
Katja Luther
03:53 PM Revision 1734056f (cdmlib): ref #6627: add import of taxon interactions to cdmlight - continue
Katja Luther
03:53 PM Revision e17658f6 (cdmlib): ref #6627: add import of taxon interactions to cdmlight
Katja Luther
03:53 PM Revision 3af06e3a (cdmlib): fix regression in fieldUnitDTO with wrong collector+collectionNr
Katja Luther
03:53 PM Revision e20ff6d2 (cdmlib): Set term type in constructor for term and voc DTO
Patrick Plitzner
03:53 PM Revision 44bae7f6 (cdmlib): ref #4545: add getUuidAndAbbrevTitleCache with class parameter
Katja Luther
03:53 PM Revision 58ce0b7d (cdmlib): ref #4545: add getUuidAndAbbrevTitleCache with class parameter
Katja Luther
03:53 PM Revision d3e1af06 (cdmlib): minor
Andreas Müller
03:53 PM Revision ab6f8dc2 (cdmlib): cleanup
Andreas Müller
03:53 PM Revision 03bb6c1e (cdmlib): ref #8178 Add vocabulary parameter to create child node service method
Patrick Plitzner
03:53 PM Revision e3062b17 (cdmlib): ref #8169 adding missing @Transactional to VersionableServiceBase.isDeletable()
Andreas Kohlbecker
03:53 PM Revision 237e3771 (cdmlib): ref #8162 update to model cache
Patrick Plitzner
03:53 PM Revision c21a9b9f (cdmlib): ref #6413 Throw exception for more than 1 or 0 FieldUnits
Patrick Plitzner
03:53 PM Revision d74d1d3a (cdmlib): Adapt test to change in clone() method
Patrick Plitzner
03:53 PM Revision 89c37d9c (cdmlib): ref #6413 Add service method for duplicating type specimen
Patrick Plitzner
03:53 PM Revision b3523463 (cdmlib): Fix clone() method of SpecimenOrObservationBase
Patrick Plitzner
03:53 PM Revision 68eaf974 (cdmlib): ref #8175: name facts in a separate table
Katja Luther
03:53 PM Revision 8e364e53 (cdmlib): Revert "ref #8173 removing 'remoting' profile activation from ide launchers"
This reverts commit 027eaf7c3181f62d725e7b5a677284f07cd5b43b. Andreas Kohlbecker
03:53 PM Revision 8a1f5821 (cdmlib): Revert "ref #8173 activation of profile remoting in the web.xml"
This reverts commit f2d3f4d37174244ca577203d1228256c6f787a29. Andreas Kohlbecker
03:53 PM Revision 6c6555bc (cdmlib): ref #8173 activation of profile remoting in the web.xml
Andreas Kohlbecker
03:53 PM Revision 4bdb6c0d (cdmlib): fix #8175: name facts should be exported by cdm light export
Katja Luther
03:53 PM Revision b2b64aae (cdmlib): ref #8115: fix move elements for not persisted target description
Katja Luther
03:53 PM Revision b91e62ba (cdmlib): ref #8173 removing 'remoting' profile activation from ide launchers
Andreas Kohlbecker
03:53 PM Revision c64b811b (cdmlib): fix #8173 spring profile 'remoting' activated by default
Andreas Kohlbecker
03:53 PM Revision ae4ccce0 (cdmlib): ref #7106 proper transaction management in turn of solving the problem in CdmRepository.getSession()
Andreas Kohlbecker
03:53 PM Revision 2e1fd4da (cdmlib): fix #7874: updateCaches always returns true
Katja Luther
03:53 PM Revision afe10f33 (cdmlib): ref #7106 logging unintentially creation of unmanaged new session in DaoBase with stacktrace
Andreas Kohlbecker
03:53 PM Revision 528d4496 (cdmlib): ref #7106 throwing Exception instead of unintentially creating unmanaged new session
Andreas Kohlbecker
03:53 PM Revision 2462bed3 (cdmlib): ref #8096: use subprogressmonitor for cache updater
Katja Luther
03:53 PM Revision bce4a336 (cdmlib): ref #7106 logging stacktrace with 'Opening new session in turn of a HibernateException'
Andreas Kohlbecker
03:53 PM Revision d4a26235 (cdmlib): minor
Andreas Müller
03:53 PM Revision 17e911b8 (cdmlib): cleanup
Andreas Müller
03:53 PM Revision 0b480c7f (cdmlib): Fix default term move position
Patrick Plitzner
03:53 PM Revision f5244347 (cdmlib): set FeatureTest preliminary to ignore
Andreas Müller
03:53 PM Revision b64f90fb (cdmlib): ref #8162 move FeatureTree and FeatureNode to term package
Andreas Müller
03:53 PM Revision a9e522a2 (cdmlib): ref #8162 missing adaption for moving of OriginalSourceBase
Andreas Müller
03:53 PM Revision babf9838 (cdmlib): ref #8162 move OriginalSourceXXX to reference package
Andreas Müller
03:53 PM Revision 49d6d28c (cdmlib): ref #8162 move OriginalSourceXXX to reference package
Andreas Müller
03:53 PM Revision 348e8500 (cdmlib): ref #8162 move term related classes from persistence(.dao.)common to .term
Andreas Müller
03:53 PM Revision 36d909f8 (cdmlib): ref #6794 adapt FeatureTreeController property path to new FeatureNode structure
Andreas Müller
03:53 PM Revision 4ce3ad94 (cdmlib): ref #8096: termservice adapted
Katja Luther
03:53 PM Revision aa7a50d3 (cdmlib): ref #8096: delete old cache updater and adapt cache updater to moved terms
Katja Luther
03:53 PM Revision d173c335 (cdmlib): ref #8096: move cache updater and service methods return updateResult -continue
Katja Luther
03:53 PM Revision aa20ae50 (cdmlib): ref #8096: move cache updater and service methods return updateResult
Katja Luther
03:53 PM Revision a7c45326 (cdmlib): ref #8162 update to model cache
Andreas Müller
03:53 PM Revision 328f6b15 (cdmlib): ref #8162 updates to test data in further metadata
Andreas Müller
03:53 PM Revision 43386cbb (cdmlib): ref #8162 updates to hibernate.cfg.xml
Andreas Müller
03:53 PM Revision 723a16fa (cdmlib): minor changes in CdmModelCacher
Andreas Müller
03:53 PM Revision 34059bfd (cdmlib): ref #8162 adapt cdmlip to new term package structure
Andreas Müller
03:53 PM Revision afc431d5 (cdmlib): ref #6794 deproxy term of feature node
Patrick Plitzner
03:53 PM Revision 7f1eb40e (cdmlib): ref #6794 fix termType settings in deleteTerms test and clean it up
Andreas Müller
03:53 PM Revision 78234aa8 (cdmlib): ref #6794 fix early setting of termType during term loading
Andreas Müller
03:53 PM Revision 2b8bd3d8 (cdmlib): fix CategoricalDataTest
Andreas Müller
03:53 PM Revision bf0b8a9d (cdmlib): cleanup
Andreas Müller
03:53 PM Revision 70709f18 (cdmlib): ref #6794 Add termType check to DefinedTermBase and TermVocabulary
Patrick Plitzner
03:53 PM Revision 9aaa42dc (cdmlib): fixing strange error logging in TestingTermInitializer and throwing RuntineException since error is unrecoverable
Andreas Kohlbecker
03:53 PM Revision 22a88a49 (cdmlib): moving kindOfUnitTerms from cdm-vaadin:TermsDataSet-ui-registration-with_auditing_info.xml to edit-test:TermsDataSet-with_auditing_info.xml
Andreas Kohlbecker
03:53 PM Revision f98fee95 (cdmlib): ref #6794 Add generics to FeatureNode and FeatureTree
Patrick Plitzner
03:53 PM Revision a3700030 (cdmlib): minor
Patrick Plitzner
03:53 PM Revision f6ede170 (cdmlib): fix #615 removing unused sun maven repo
Andreas Kohlbecker
03:53 PM Revision f2ae523b (cdmlib): ref #6794 Fix termType comparison
Patrick Plitzner
03:53 PM Revision 4e6fc7d5 (cdmlib): Fix potential NPE
Patrick Plitzner
03:53 PM Revision f61c00e5 (cdmlib): ref #8153 Fix feature tree type check for distinct features
Patrick Plitzner
03:53 PM Revision 9779f8dc (cdmlib): ref #8153 Further adapt cdmlib to model changes
- Adjust feature node service to model changes Patrick Plitzner
03:53 PM Revision 291febb1 (cdmlib): ref #8153 Adapt cdmlib to model changes
- Add constructor for creating a FeatureNode for a given termType
- Adjust feature node service to model changes
Patrick Plitzner
03:53 PM Revision 767613e2 (cdmlib): ref #8017 cleanup
Andreas Müller
03:53 PM Revision 75de8ff8 (cdmlib): Revert "ref #8124: adapt NaturalLanguageGenerator to usage in nameFacts"
This reverts commit c495b39b090fa3af00d870a8ba8171d7300e66a4. Katja Luther
03:53 PM Revision 3a9a4643 (cdmlib): ref #8124: add new TaxonNameDescriptionDefaultCacheStrategy
Katja Luther
03:53 PM Revision 72c67e90 (cdmlib): ref #8124: adapt NaturalLanguageGenerator to usage in nameFacts
Katja Luther
03:53 PM Revision dd7cc152 (cdmlib): ref #7514 adapt MAN symbol to portal tests (cont.)
Andreas Müller
03:53 PM Revision ba528808 (cdmlib): ref #7514 adapt MAN symbol to portal tests
Andreas Müller
03:53 PM Revision 4bbceeca (cdmlib): ref #6618 , ref #8012, ref #3853 add TermType.Character
Andreas Müller
03:53 PM Revision c6a4b417 (cdmlib): cleanup and MultilanguageText.add(Language, String) added
Andreas Müller
03:53 PM Revision 754fc710 (cdmlib): ref #8146 Add service method for UuidAndTitleCache by termType for trees
Patrick Plitzner
03:53 PM Revision ca48edd7 (cdmlib): ref #8146 Refactor service method
Patrick Plitzner
03:53 PM Revision 80f9d479 (cdmlib): ref #8146 Adapt getEmptyDefinedTermBase() for new term types
Patrick Plitzner
03:53 PM Revision 0f79beef (cdmlib): ref #8142 Add getter/setter for plural
Patrick Plitzner
03:53 PM Revision bc5454ec (cdmlib): removing unused private fiels in H2DatabaseType
Andreas Kohlbecker
03:53 PM Revision 165322e5 (cdmlib): cleanup
Andreas Müller
03:53 PM Revision 8b76e02a (cdmlib): ref #7514 update misapplied name symbols & add tests
Andreas Müller
03:53 PM Revision 05e582ce (cdmlib): updated model cache
Katja Luther
03:53 PM Revision 710e2362 (cdmlib): minor
Andreas Müller
03:53 PM Revision 5e5b91e1 (cdmlib): fix some compilation issues with generics
Andreas Müller
03:53 PM Revision 09fceda2 (cdmlib): cleanup
Andreas Müller
03:53 PM Revision 815ca41e (cdmlib): cleanup
Andreas Müller
03:53 PM Revision ab9e1654 (cdmlib): doc
Andreas Müller
03:53 PM Revision eda8c594 (cdmlib): cleanup
Andreas Müller
03:53 PM Revision 8f96afd0 (cdmlib): ref #8118 update mysql driver path in code and tests
Andreas Müller
03:53 PM Revision 2e3e534a (cdmlib): rename cdm 5.5 update script package
Andreas Müller
03:53 PM Revision 016dc810 (cdmlib): update remote-web-app test DB to 5.0
Andreas Müller
03:52 PM Revision 813d24c9 (cdmlib): ref #8128 first implementation to support EnumSet hibernate user types (not yet ready)
Andreas Müller
03:52 PM Revision 4e916595 (cdmlib): ref #8017 add isLectotype to helper class
Andreas Müller
03:52 PM Revision f5467867 (cdmlib): ref #8120 add structure- and property modifier
Andreas Müller
03:52 PM Revision e54f6df0 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision fd87156d (cdmlib): ref #8142 update script for Representation.plural and ref #8017 TypeDesignation.sources
Andreas Müller
03:52 PM Revision 4d246beb (cdmlib): ref #8142 add plural to representations
Andreas Müller
03:52 PM Revision 87870c9f (cdmlib): ref #8019 add orthography and etymology as name features
Andreas Müller
03:52 PM Revision e0e1276c (cdmlib): fix #8140 update "lectotype" type designation status
Andreas Müller
03:52 PM Revision 7b1adf5f (cdmlib): fix #8139 add test for valid lectotype source
Andreas Müller
03:52 PM Revision 50fcf9f1 (cdmlib): ref #7470 some javadoc
Andreas Müller
03:52 PM Revision 1bc47072 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 43df0fa5 (cdmlib): ref #8120 Add structuralModifier and propertyModifier to Character
Andreas Müller
03:52 PM Revision 558cb88a (cdmlib): add comment to x.inverseRepresentations
Andreas Müller
03:52 PM Revision 5b64a834 (cdmlib): minor
Andreas Müller
03:52 PM Revision 08f94ac8 (cdmlib): ref #8006, ref #7514 , ref #7857 fix TermRepresentationUpdater sql
Andreas Müller
03:52 PM Revision ccc0451c (cdmlib): ref #7859 fix update script for CdmPreference.value => CLOB
Andreas Müller
03:52 PM Revision dba70f4b (cdmlib): ref #7414 handle optional column remove
Andreas Müller
03:52 PM Revision bc21c811 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 352cffe5 (cdmlib): fix #7772 Rename TermBase_inverseRepresentation to DefinedTermBase_InverseRepresentation
Andreas Müller
03:52 PM Revision ea5fde75 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 60f82184 (cdmlib): fix #8079 remove cascading from User and Group
Andreas Müller
03:52 PM Revision 384ee08a (cdmlib): ref #7470 add verbatim type designation / TextTypeDesignation
Andreas Müller
03:52 PM Revision 71d214d3 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 0a9aba80 (cdmlib): ref #8019 add Typification Notes as name feature
Andreas Müller
03:52 PM Revision 0bc5096d (cdmlib): ref #8017 add sources to TypeDesignationBase (cont.)
Andreas Müller
03:52 PM Revision cf1af357 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision fc073f72 (cdmlib): ref #8017 add sources to TypeDesignationBase
Andreas Müller
03:52 PM Revision d59ef31e (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 7d9b2678 (cdmlib): fix #8012 add TermTypes structure and property
Andreas Müller
03:52 PM Revision 743a9157 (cdmlib): ref #6794 add termType to FeatureTree and FeatureNode
Andreas Müller
03:52 PM Revision 9db81ba4 (cdmlib): ref #6794 remove setRoot from FeatureTree
Andreas Müller
03:52 PM Revision 5e80260d (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 86c1185a (cdmlib): fix #7372 make allowDuplicates configurable in FeatureTree
Andreas Müller
03:52 PM Revision 9afb8fd6 (cdmlib): ref #7859 removed test for CdmPreference.value size
Andreas Müller
03:52 PM Revision c2cdd7ea (cdmlib): ref #8004 add sortIndex to JAXB annotation
Andreas Müller
03:52 PM Revision 6cd6cbd2 (cdmlib): ref #8006 update labels for MAN, ppSynonyms, inval. desig. & tax. included
Andreas Müller
03:52 PM Revision 9fc64ad5 (cdmlib): fix #7514 update symbols for MAN and ppSynonyms
Andreas Müller
03:52 PM Revision 639e7a63 (cdmlib): fix #7683 fix ExternalLink_AUD.uuid allows null and fix TableCreator for future
Andreas Müller
03:52 PM Revision b0a24fbb (cdmlib): fix #7857 update name relationship type respresentations and symmetrie
Andreas Müller
03:52 PM Revision 7ac506c5 (cdmlib): fix #7859
Andreas Müller
03:52 PM Revision c8ec63d9 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision ea67f66a (cdmlib): fix #7682 set Point.precision to null where 0
Andreas Müller
03:52 PM Revision 4ccdfab9 (cdmlib): fix 8004 add sortindex to DescriptionElementBase
Andreas Müller
03:52 PM Revision bbf9ea81 (cdmlib): add framework for schema update to 5.5
Andreas Müller
03:52 PM Revision de89e527 (cdmlib): ref #8118 update mysql driver package string
Andreas Müller
03:52 PM Revision 5751b127 (cdmlib): fix #7896 fix NPE in RelationshipTermBase.getInverseRepresentation
Andreas Müller
03:52 PM Revision e40cc9c1 (cdmlib): Cleanup
Andreas Müller
03:52 PM Revision d617562f (cdmlib): ref #7106 logging if the worse case is actually happening
Andreas Kohlbecker
03:52 PM Revision b73951aa (cdmlib): minor
Andreas Müller
03:52 PM Revision 520123a5 (cdmlib): ref #8118 fix DatabaseTypeEnumTest
Andreas Müller
03:52 PM Revision 90e44203 (cdmlib): ref #8115: first steps to solve problems with moving description elements
Katja Luther
03:52 PM Revision cb620033 (cdmlib): ref #8118 added MariaDbDatabaseType
Andreas Müller
03:52 PM Revision 13724b0c (cdmlib): ref #8118 fix compile error in SequenceTableCreator
Andreas Müller
03:52 PM Revision c383fa9c (cdmlib): ref #8118 drivers for MySQL updated and MariaDB added
Andreas Müller
03:52 PM Revision 4797c73a (cdmlib): fix CacheUpdater
Andreas Müller
03:52 PM Revision 619ddaa7 (cdmlib): implement merge for ImportResult
Andreas Müller
03:52 PM Revision 7cf9a2d3 (cdmlib): cleanup
Andreas Müller
03:52 PM Revision 133e595c (cdmlib): fix #8104 renaming familiyNamePart back to lastNamePart
Andreas Kohlbecker
03:52 PM Revision c1e5ed0d (cdmlib): ref #8011 Fix serialization problem
- Use Map.Entry instead of hibernate.envers.Pair Patrick Plitzner
03:52 PM Revision 4926c3dc (cdmlib): ref #8011 Make dtos Serializable
Patrick Plitzner
03:52 PM Revision b4262d8b (cdmlib): ref #8011 Add service method to find DerivateDtos
Patrick Plitzner
03:52 PM Revision a78fdbaf (cdmlib): ref #8011 Make entity reference Serializable
Patrick Plitzner
03:52 PM Revision f33125f8 (cdmlib): ref #8011 Add uri and termType to DTO query
Patrick Plitzner
03:52 PM Revision 8915dcc3 (cdmlib): ref #8011 Allow null for termType to ignore this filter
Patrick Plitzner
03:52 PM Revision bdb20408 (cdmlib): ref #8011 Add termType to service method
Patrick Plitzner
03:52 PM Revision 7d1a7f0a (cdmlib): Updating develop poms back to pre merge state
jenkins
03:52 PM Revision 1460adeb (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:52 PM Revision 24b72e14 (cdmlib): updating poms for 5.6.0-SNAPSHOT development
jenkins
03:50 PM Revision 653d1473 (cdmlib): ref #8011 Compare on lower case labels
Patrick Plitzner
03:50 PM Revision 785b1fed (cdmlib): ref #8011 Make AbstractTermDto comparable
Patrick Plitzner
03:50 PM Revision 009f44be (cdmlib): ref #8011 Add representation text to TermDtos
Patrick Plitzner
03:50 PM Revision 5fe51649 (cdmlib): ref #8011 Add service method to find term DTOs by label
Patrick Plitzner
11:40 AM Revision 85588951 (cdmlib): Manually remove "SNAPSHOT" from version number
Patrick Plitzner
10:41 AM Revision e6e12b1e (cdmlib): ref #6774 Extract constants + add node type
Patrick Plitzner

04/12/2019

02:48 PM Revision 12d50943 (taxeditor): Fix problem for characters with same name
Patrick Plitzner
02:46 PM Revision 78bd3b11 (taxeditor): Fix problem for characters with same name
Patrick Plitzner
01:07 PM task #7515 (Resolved): TypeDesignationStatusComparator to sort by vocabulary first and then by term order
Andreas Müller
01:06 PM bug #8223 (Resolved): Urgent TaxonNode wizard issues
Andreas Müller
12:58 PM feature request #7932: Implement subject resolver for CdmPreferences
This is mostly done but untested therefore move to 5.7 Andreas Müller
12:03 PM Revision 6042fefa (cdm-server): updating poms for 5.7.0-SNAPSHOT development
jenkins
12:01 PM task #7935: Discuss new solution to establish the communication between submitter and curator
As plan B: E-Mail curation@phycobank.org is working now,
Currently most phycologists contact the curator by the pe...
Wolf-Henning Kusber
11:46 AM Revision 8175edb9 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.6.0-SNAPSHOT
jenkins
11:46 AM Revision 855ef29e (cdm-webapp): updating poms for 5.7.0-SNAPSHOT development
jenkins
11:46 AM Revision d8f26902 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.7.0-SNAPSHOT
jenkins
11:45 AM Revision 4d7307cd (taxeditor): Updated version in pom / project files to taxeditor version : 5.7.0-SNAPSHOT and cdmlib version : 5.7.0-SNAPSHOT
jenkins
11:45 AM Revision 9ae093cd (taxeditor): Updated version in pom / project files to taxeditor version : 5.6.0 and cdmlib version : 5.6.0
jenkins
11:45 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title

Book in this series:
title: "Taxonomy - biogeography - diversity"
datePublished: "2012"
editor: "L...
Wolf-Henning Kusber
11:43 AM Revision 70e662ca (cdm-vaadin): jenkins bumping cdmlib.version to 5.6.0-SNAPSHOT
jenkins
11:43 AM Revision ff028ba4 (cdm-vaadin): updating poms for 5.7.0-SNAPSHOT development
jenkins
11:43 AM Revision 17a45f4c (cdm-vaadin): updating poms for 5.6.0 branch with snapshot versions
jenkins
11:43 AM Revision 506877e2 (cdm-vaadin): jenkins bumping cdmlib.version to 5.7.0-SNAPSHOT
jenkins
11:43 AM Revision e0be41dc (cdm-dataportal): updating poms for 5.7.0-SNAPSHOT development
jenkins
11:40 AM Revision 0a72e5be (cdmlib): updating poms for 5.7.0-SNAPSHOT development
jenkins
11:25 AM bug #7979 (Closed): Registration date and time, display
Test portal and Release Portal (checked 2019-04-12):
Displayed dates are correct.
Registrations made in Vaadin ar...
Wolf-Henning Kusber
11:19 AM Revision 1a4fe38f (taxeditor): Expand character details view sections
Patrick Plitzner
10:51 AM bug #8090 (Closed): Reference editor: Label In proceedings in InProceedings missing
Wolf-Henning Kusber
10:33 AM feature request #8155: SpecimenTypeDesignationEditor: allow choosing the typified name from the homotypical group for specific type status

Agreed: if the basionym is existing this name should be chosen as default for the typified name field.
In general,...
Wolf-Henning Kusber

04/11/2019

05:54 PM bug #8065 (Resolved): HibernateException: corrupt session problem breaks SpecimenTypeDesignationworkingsetEditor type designation table
Andreas Kohlbecker
05:54 PM bug #8099 (Resolved): Error saving name type designation editor due to problem in poupeditor context
Andreas Kohlbecker
05:51 PM bug #7690 (New): Adapt available typedesignation editors to name rank
Andreas Kohlbecker
05:48 PM feature request #8173 (Resolved): spring profile remoting enabled by default
needs to be reviewed Andreas Kohlbecker
05:45 PM bug #7106 (Resolved): avoid factory.openSession() in CdmRepository
this issue should be solved now Andreas Kohlbecker
05:45 PM bug #7106: avoid factory.openSession() in CdmRepository
changing the ticket subject since there is now a separate ticket for the DaoBase class: #8169 Andreas Kohlbecker
05:44 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts
Poposal: Make names (stored in the system) available [as new names as well as for existing names]. For genera, the au... Wolf-Henning Kusber
04:24 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts
Related to #8217
If a name without reference is in the dropdown list, the user is forced to add a reference.
This i...
Wolf-Henning Kusber
05:41 PM bug #8188 (Resolved): Allow configuring hibernate properties via properties file
this should be solved Andreas Kohlbecker
05:30 PM bug #7962 (Closed): PopupEditors: *DTO in context 'breadcrumbs' to be transformed into more humane labels
works as expected Andreas Kohlbecker
05:28 PM bug #8189 (In Progress): Allow configuration of 'user.home' via the spring environment
now that the changes made for this ticket are no longer causing any problems I will do the next step: turning all spi... Andreas Kohlbecker
05:21 PM bug #8176 (Closed): WeaklyRelatedEntityCombobox is slow
The WeaklyRelatedEntityCombobox is no longer causing performance problems and edit as well create buttons are working... Andreas Kohlbecker
05:17 PM Revision 521f90aa (cdm-vaadin): ref #8176 fixing refreshing of specificEpithet after editing the name via the WeaklyRelatedEntityCombobox edit button
Andreas Kohlbecker
04:54 PM bug #8217 (Feedback): ToManyRelatedEntitiesComboboxSelect edit button not enabled
I consider this correct behavior but not user friendly. We should disable the vlaidation in case the editor is readon... Andreas Kohlbecker
04:01 PM bug #8217: ToManyRelatedEntitiesComboboxSelect edit button not enabled
Curator:
Test
Replaced synonym without reference. Warning, selection of an existing reference, save. Works
Submi...
Wolf-Henning Kusber
04:39 PM Revision 572b86b7 (cdm-vaadin): ref #8176 fixing edit button functionality in WeaklyRelatedEntityCombobox
Andreas Kohlbecker
04:26 PM feature request #8241 (Closed): Rename FeatureTreeEditor to TermTreeEditor
This does not have to be done in the Java classes but in the UI Patrick Plitzner
04:18 PM bug #8225 (In Progress): Deleting one of two type designations removes both
this works now, but is not really nice. So we move it to next release. Katja Luther
12:57 PM bug #8225 (Feedback): Deleting one of two type designations removes both
the deleted typeDesignation is not removed, this problem also appears when both typedesignations are already persisted Katja Luther
12:27 PM bug #8225 (Resolved): Deleting one of two type designations removes both
Katja Luther wrote:
> tested on nightly:
>
> * create a new typeDesignation (a first one already exists)
> * del...
Patrick Plitzner
11:58 AM bug #8225 (Feedback): Deleting one of two type designations removes both
tested on nightly:
* create a new typeDesignation (a first one already exists)
* delete the first one
* the seco...
Katja Luther
03:22 PM bug #7963 (Closed): TaxonNamePopEditor: name part field visibility not correct for all ranks
new ticket: #8240 Wolf-Henning Kusber
03:19 PM bug #7963: TaxonNamePopEditor: name part field visibility not correct for all ranks
For rank "unknown rank" only the uninomial field is shown. Correct. Wolf-Henning Kusber
03:20 PM bug #8240 (New): TaxonNamePopEditor: name part field visibility not correct for all ranks (new)
I checked the complete list. With some ranks (mostly not relevant for PhycoBank, I have problems).
"species aggega...
Wolf-Henning Kusber
02:49 PM bug #8184 (In Progress): SpecimenTypedesignationEditor: add new specimen broken Chrome browser
Andreas Kohlbecker
02:10 PM bug #8184: SpecimenTypedesignationEditor: add new specimen broken Chrome browser
Testsystem 09 April 2019.
saving types not possible. See also problems with Safari/Mac.
Wolf-Henning Kusber
02:37 PM bug #8097 (Closed): Problem with inserting a section - inReference is "lost"
Andreas Kohlbecker
02:31 PM bug #8097: Problem with inserting a section - inReference is "lost"
Test:
bottom up: section in (select) article: works
bottom up: section in (select) book: works
top down: select ar...
Wolf-Henning Kusber
01:45 PM Revision 04f8f2b1 (taxeditor): ref #3836: fix modifier section for stateData/statistical measurement
Katja Luther
01:29 PM Revision a970aef8 (taxeditor): ref #8225 Temporary fix - ask for saving before removing a designation
Patrick Plitzner
01:19 PM Revision 75ee3818 (taxeditor): ref #8225 Remove deleted type designation from details view
Patrick Plitzner
01:11 PM bug #8171 (Closed): javax.sql.DataSource.getConnection() implementation in WrappedCdmDataSource fails to cache the connection which and leaves it unclosed
We can close this ticket as solved, since fixing this issue did not cause any side effect problems Andreas Kohlbecker
12:26 PM Revision 9d38e970 (taxeditor): ref #8225 Fix deletion of not persisted type designations
Patrick Plitzner
12:05 PM task #7515: TypeDesignationStatusComparator to sort by vocabulary first and then by term order
please have a look whether this solves the problem Katja Luther
12:01 PM bug #8088: Open taxon node wizard issues
the urgent issues are handled in #8223, the rest will be implemented in 5.7 Katja Luther
12:00 PM feature request #8058: Further issues for (local) preferences
the only missing issue is the height of the matching dialog, so I move this ticket to 5.7 Katja Luther
11:55 AM bug #8222 (Closed): Deleting a type designation from a name is directly persisted
tested on nightly:
* created new typeDesignation and save
* remove typeDesignation and close without saving
* th...
Katja Luther
11:53 AM bug #7541 (Closed): Insufficient rights lead to missing focus in name editor
the details view issues are now handled in #8239 Katja Luther
10:56 AM bug #7541: Insufficient rights lead to missing focus in name editor
So do I understand correctly that **this** ticket is only about setting the focus in name editor and not about the ot... Andreas Müller
10:54 AM bug #7541: Insufficient rights lead to missing focus in name editor
Katja Luther wrote:
> Andreas Müller wrote:
> > Hmm, can someone explain what the expected behavior is? To me it so...
Andreas Müller
11:50 AM feature request #8239 (New): Rights issues in TaxEditor
This should be a ticket to collect all rights issues in taxEditor.
* in Details View fields the user is not allowe...
Katja Luther
11:47 AM bug #8219 (Rejected): Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
I could not reproduce this bug in the test system. There where also no related error report in the mails or in Riot s... Andreas Kohlbecker
11:24 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
Andreas Müller wrote:
> What I do not understand is if already the select creates the wrong result how can hibernate...
Andreas Kohlbecker
09:44 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
What I do not understand is if already the select creates the wrong result how can hibernate (security) know that the... Andreas Müller
08:55 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
Andreas Müller wrote:
> Is the subselect necessary to reproduce the behavior in the above SQL statements. If not we ...
Andreas Kohlbecker
11:46 AM feature request #4028 (Closed): Distinguish Features and Characters
Andreas Müller
11:45 AM task #7414 (Closed): Delete mediaCreatedOld
Andreas Müller
11:44 AM feature request #7470 (Closed): Verbatim type designation information
Andreas Müller
11:44 AM feature request #3836 (Resolved): Implement modifiers and modifying text for Description Elements in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > now the modifier section is shown only if the feature has recommend...
Katja Luther
11:43 AM bug #7682 (Closed): Point.precision must not be 0 by default
Andreas Müller
11:43 AM Revision 7ca8076a (taxeditor): ref #3836: show always freetext modifier field
Katja Luther
11:43 AM feature request #7653 (Closed): [DISCUSS] Delete NameFacts => Result: no
Andreas Müller
11:42 AM bug #7772 (Closed): Rename TermBase_inverseRepresentation to DefinedTermBase_InverseRepresentation
Andreas Müller
11:42 AM bug #7683 (Closed): external links Audit table should allow uuid to be null
Andreas Müller
11:41 AM bug #7859 (Closed): Increase size of CdmPreference.value
Andreas Müller
11:41 AM bug #7857 (Closed): Update name relationship type representations and symmetrie
Andreas Müller
11:40 AM task #8118: Update MySQL drivers
how to information added to [[MySqlFaq]] Andreas Kohlbecker
10:05 AM task #8118: Update MySQL drivers
We should create a Wiki page for this information. Move to new milestone as this is not release critical. Andreas Müller
11:40 AM feature request #8012 (Closed): Add termType for Structure and Property
Andreas Müller
11:39 AM feature request #8019 (Closed): Add "Typification Notes", "Ortography" and "Etymology" to NameFeature vocabulary
Andreas Müller
11:37 AM feature request #8120 (Closed): Add structural and property modifiers
Andreas Müller
11:37 AM feature request #8142 (Closed): Representations have optional "plural" as additional field
Andreas Müller
11:35 AM feature request #8136 (Closed): Implement sources for type designations in TaxEditor
Andreas Müller
11:31 AM feature request #8136: Implement sources for type designations in TaxEditor
I can not close the ticket as long as #8017 is not closed. Katja Luther
11:30 AM feature request #8136 (Resolved): Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> Maybe we shorten the "Status Reference Detail" to "Status Ref Detail" or back to "Reference ...
Katja Luther
10:46 AM feature request #8136: Implement sources for type designations in TaxEditor
Maybe we shorten the "Status Reference Detail" to "Status Ref Detail" or back to "Reference Detail" (maybe with a sma... Andreas Müller
10:43 AM feature request #8136: Implement sources for type designations in TaxEditor
Now lectotype references have more space for the labels then ordinary types:
![](picture499-1.png)
This does no...
Andreas Müller
10:10 AM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > If Status is completely deleted the re...
Katja Luther
10:04 AM feature request #8136: Implement sources for type designations in TaxEditor
I just realized that the same problem exists e.g. for original sources. So it seems to be a general issue for lists, ... Andreas Müller
08:47 AM feature request #8136: Implement sources for type designations in TaxEditor
For selection the type designation you can basically select any empty space on the left or right side (see image)
...
Patrick Plitzner
11:34 AM feature request #8017 (Closed): TypeDesignations need sources additional to lectotypifcation sources
Andreas Müller
11:33 AM feature request #8124 (Closed): Activate Name Facts in Taxeditor
the ticket for the updating of bulkeditors is #8229, the rest is implemented and reviewed so I close this ticket. Katja Luther
11:30 AM bug #8200 (Closed): Changing title(cache) for factual data set not possible
Closing this ticket as the remaining issues are duplicated in #7865 Patrick Plitzner
09:16 AM bug #8200 (Feedback): Changing title(cache) for factual data set not possible
Katja Luther wrote:
> but as this is the general behaviour for titlecaches we may close this ticket? Because it work...
Andreas Müller
11:20 AM feature request #8146 (Closed): Adapt taxeditor UI to structure and property term type
Added #8146#note-30 to #8235
Created #8238 for #8146#note-31
Closing this ticket
Patrick Plitzner
09:57 AM feature request #8146: Adapt taxeditor UI to structure and property term type
All the rest seems to work and ticket can be closed then. Andreas Müller
09:56 AM feature request #8146 (Feedback): Adapt taxeditor UI to structure and property term type
Generally it should be possible to move a Character subtree to a Feature tree as Character is a subtype. But of cours... Andreas Müller
09:50 AM feature request #8146: Adapt taxeditor UI to structure and property term type
Why not using the term type in the label, e.g. instead of FeatureTree => Structure Tree. Then users must not think ab... Andreas Müller
11:19 AM feature request #8238 (Feedback): Allow interoperability between term trees
Copied from #8146:
Generally it should be possible to move a Character subtree to a Feature tree as Character is a...
Patrick Plitzner
11:10 AM Revision 9e150d47 (taxeditor): ref #8136: shorter reference detail label
Katja Luther
11:06 AM feature request #7865 (Resolved): Remaining factual data view label issues
It has now be solved like this:
* TitleCache is protected -> \<old TitleCache\> - \<Move message\>
* TitleCache i...
Patrick Plitzner
09:27 AM feature request #7865 (Feedback): Remaining factual data view label issues
As mentioned in note-11 the solution for the problem is not so easy. First of all we should have a look how it was im... Andreas Müller
09:20 AM feature request #7865: Remaining factual data view label issues
Patrick Plitzner wrote:
> The titlecache issue is solved. Some other issues came up while fixing this ticket -> #823...
Andreas Müller
11:00 AM Revision 0abb2f54 (cdmlib): ref #7865 Add move message to protected title caches
Patrick Plitzner
10:52 AM Revision d446db04 (taxeditor): ref #8223: check success before try to open new taxon
Katja Luther
10:35 AM feature request #3616: Show DescriptionElementBase.timeperiod in Dataportals
Andreas Kohlbecker wrote:
> I suggest to close this ticket now, agreed?
What I really don't like in the current i...
Andreas Müller
10:32 AM Revision 03a51f97 (taxeditor): ref #7865 Continue move operation after saving
Patrick Plitzner
10:31 AM bug #7904: DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates temporary Team objects which can not be garbage collected.
As release is urgent now I have to move again to next milestone Andreas Müller
10:31 AM Revision 0831d056 (cdmlib): ref #7865 Fix description label generation when moving
Patrick Plitzner
10:31 AM bug #8190 (Closed): Default FeatureTree throws exception
For me it also seems to work Andreas Müller
10:16 AM bug #8233 (In Progress): [Follow up] Creating type duplicates
The fixes work as expected. A minor issue: as type status is a required field but Accession number etc are not we sho... Andreas Müller
10:11 AM feature request #6413 (Closed): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
As some of the most important issues from #8233 are solved in the meanwhile we can close this ticket and try to fully... Andreas Müller
10:09 AM Revision e5d18094 (taxeditor): ref #8136: move not designated checkbox
Katja Luther
09:24 AM Revision c3cad351 (taxeditor): ref #8136: label issues
Katja Luther

04/10/2019

10:20 PM feature request #8136: Implement sources for type designations in TaxEditor
So not very nice (as selection is crucial for entering sources, but it is true that it always works in the area below... Andreas Müller
10:16 PM feature request #8136: Implement sources for type designations in TaxEditor
Patrick Plitzner wrote:
> > Clicking somewhere behind the type combo or the 'Not deisgnated' checkbox activates the ...
Andreas Müller
10:05 PM feature request #8136: Implement sources for type designations in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > If Status is completely deleted the reference is not deleted but sh...
Andreas Müller
06:12 PM feature request #8136: Implement sources for type designations in TaxEditor
> Clicking somewhere behind the type combo or the 'Not deisgnated' checkbox activates the selection of the type desig... Patrick Plitzner
02:56 PM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> ??
this was a question for Patrick. See the description in node#33
Katja Luther
02:53 PM feature request #8136: Implement sources for type designations in TaxEditor
?? Andreas Müller
09:55 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
Andreas Kohlbecker wrote:
> reopening since I seem to remember that this bug has been originally reported by Heba wh...
Andreas Müller
09:54 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
Is the subselect necessary to reproduce the behavior in the above SQL statements. If not we should tear down to a sin... Andreas Müller
06:33 PM bug #8219 (In Progress): Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
reopening since I seem to remember that this bug has been originally reported by Heba when working on the test or pro... Andreas Kohlbecker
06:16 PM bug #8219 (Rejected): Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
I filed a bug report in the Oracle bug tracker:
https://bugs.mysql.com/bug.php?id=94973
since we can not do a...
Andreas Kohlbecker
05:49 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
further reduced the query reproducing the bug to
~~~sql
SELECT
this_.nomenclaturallyRelevant,
this_.externalL...
Andreas Kohlbecker
05:41 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
This could be related to the mysql bug https://bugs.mysql.com/bug.php?id=94795 Andreas Kohlbecker
05:36 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
The above bug seems only to occur on my laptop which is running
mysqld Ver 5.7.25-0ubuntu0.16.04.2 for Linux on x...
Andreas Kohlbecker
05:18 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
The above described effect can be more isolated with the following queries:
Correct results:
~~~sql
SELECT
t...
Andreas Kohlbecker
04:57 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
I now pinned down the cause to the `.IIdentifiableEntityService.findByTitleWithRestrictions(..)` methods.
What is ...
Andreas Kohlbecker
06:15 PM Revision e978c93a (taxeditor): ref #8233 Add barcode and catalog number to clone type functionality
Patrick Plitzner
05:53 PM feature request #8044: Add "Move to..." menu to term editor
Moving to 5.7 where it can be reviewed when set to non-experimental Patrick Plitzner
05:52 PM task #8130: Check if related feature data is cleared when supported facts type is changed
moved to 5.7 Patrick Plitzner
05:51 PM feature request #8135: Implement verbatim type information in TaxEditor
Moving to 5.7 Patrick Plitzner
05:49 PM bug #8233 (Resolved): [Follow up] Creating type duplicates
@Andreas: Could you review the fixed issues and, if everything works, move this ticket to 5.7 again? Patrick Plitzner
07:50 AM bug #8233 (In Progress): [Follow up] Creating type duplicates
remaining issues from #6413:
* ~~We should change order, first collection, then accession number.~~
* Also the st...
Patrick Plitzner
05:41 PM Revision 59f0afe5 (taxeditor): ref #8233 Add barcode and catalog number to clone type functionality
Patrick Plitzner
05:41 PM Revision 3262af01 (cdmlib): ref #8233 Add barcode and catalog number to clone type service method
Patrick Plitzner
05:31 PM Revision 06122990 (taxeditor): ref #8233 Ask for saving before cloning type designation
Patrick Plitzner
05:31 PM Revision 093b7fca (taxeditor): Fix potential NPE
Patrick Plitzner
05:31 PM Revision d46d8905 (taxeditor): ref #8233 Do not evaluate accession number for "Finish" button
Patrick Plitzner
05:31 PM Revision 62b9b524 (taxeditor): ref #8233 Move collection above accession number
Patrick Plitzner
03:58 PM feature request #8096 (Closed): Implement CacheUpdater as long running task with correct progress monitoring
Moved null/empty cache issues to new ticket #8237.
All the rest works or has new ticket so we can close this one.
Andreas Müller
03:57 PM bug #8237 (New): Cache updating sometimes does not work as expected for references and names
... and maybe other classes. Details can be found in #8096#note-20 and previous comments Andreas Müller
03:52 PM feature request #8124 (Feedback): Activate Name Facts in Taxeditor
Can you please link the bulk editor tickets?
The switching between 2 bulk editors with same name seems to work now...
Andreas Müller
03:45 PM feature request #3836 (Feedback): Implement modifiers and modifying text for Description Elements in TaxEditor
Katja Luther wrote:
> now the modifier section is shown only if the feature has recommended modifier voc, so it is h...
Andreas Müller
03:43 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
The discussion on recommended modifiers I moved to #8236. Andreas Müller
12:04 PM feature request #3836 (Resolved): Implement modifiers and modifying text for Description Elements in TaxEditor
Katja Luther
03:41 PM feature request #8236 (New): [DISCUSS] Should recommended modifiers also hold for DescriptionElements
Currently they are only available for features that support categorical or quantitative data. Here it triggers the mo... Andreas Müller
03:33 PM bug #8211 (Closed): Trigger new search when clicking on identifier search
now it works Andreas Müller
02:42 PM Revision 36632b22 (taxeditor): ref #8223: disable name/taxon if existing taxon/name is selected
Katja Luther
02:21 PM bug #8223 (In Progress): Urgent TaxonNode wizard issues
Katja Luther
01:48 PM bug #8228 (Closed): refresh of details for same object in different bulk editors does not work
I tested on nightly/rem_conf_am:
* I searched in the taxon bulk editor with the same search string
* I selected t...
Patrick Plitzner
01:17 PM bug #8228: refresh of details for same object in different bulk editors does not work
Patrick Plitzner wrote:
> Shouldn't bulk editor only open as singletons? What is the use case of having the same obj...
Katja Luther
01:09 PM bug #8228 (Feedback): refresh of details for same object in different bulk editors does not work
Shouldn't bulk editor only open as singletons? What is the use case of having the same object selected in two differe... Patrick Plitzner
12:11 PM bug #8228: refresh of details for same object in different bulk editors does not work
please review. Katja Luther
01:39 PM bug #8225 (Resolved): Deleting one of two type designations removes both
This is fixed by fixing #8222.
I already tested on nightly.
Patrick Plitzner
01:35 PM bug #8234 (Closed): Move description elements issues
tested on nightly. Works as expected Patrick Plitzner
12:12 PM bug #8234: Move description elements issues
works fine.
waiting for the nightly build to test there again
Patrick Plitzner
11:37 AM bug #8234: Move description elements issues
moving descriptions is solved, too.
I reviewed the 2. task and added the removing of the description elements in e...
Katja Luther
10:25 AM bug #8234 (Resolved): Move description elements issues
Applied in changeset commit:taxeditor|dc4dc742793f5823f61decb5411f46e9b7a66a05. Katja Luther
09:15 AM bug #8234: Move description elements issues
Moving to unassigned milestone because the critical issue (not removing the description element when moving it to ano... Patrick Plitzner
09:03 AM bug #8234 (Closed): Move description elements issues
1. ~~Moving description elements is only executed after saving while moving the whole descriptions is executed immedi... Patrick Plitzner
01:33 PM Revision ee8978f6 (cdmlib): Revert "ref #7865 Fix titleCache generation when moving taxon descriptions"
This reverts commit 48c401d490b010f21c5e6718263236b99a12d3cb. Patrick Plitzner
01:04 PM feature request #8146: Adapt taxeditor UI to structure and property term type
Katja Luther wrote:
> Patrick Plitzner wrote:
> > I added the term type for feature trees to the details view. Is t...
Patrick Plitzner
12:53 PM feature request #8146: Adapt taxeditor UI to structure and property term type
Patrick Plitzner wrote:
> I added the term type for feature trees to the details view. Is this ok?
> We may think a...
Katja Luther
12:51 PM feature request #8146 (Resolved): Adapt taxeditor UI to structure and property term type
Katja Luther wrote:
> Patrick Plitzner wrote:
> > I added the term type for feature trees to the details view. Is t...
Patrick Plitzner
12:07 PM feature request #8146 (Feedback): Adapt taxeditor UI to structure and property term type
Patrick Plitzner wrote:
> I added the term type for feature trees to the details view. Is this ok?
> We may think a...
Katja Luther
07:59 AM feature request #8146 (Resolved): Adapt taxeditor UI to structure and property term type
I added the term type for feature trees to the details view. Is this ok?
We may think about further options in the n...
Patrick Plitzner
01:04 PM feature request #8235 (Closed): Create separate menu for term tree editors for each term tree type
Copied from #8146:
~~We could add the termtype to the label of term trees and terms and maybe make it toggleable i...
Patrick Plitzner
12:51 PM Revision b2b10e70 (taxeditor): ref #8146 move term type to top in details view
Patrick Plitzner
12:34 PM bug #8222 (Resolved): Deleting a type designation from a name is directly persisted
Now type designations are deleted via operations which are executed when saving the name editor. Patrick Plitzner
12:33 PM Revision d12aec9d (taxeditor): ref #8222 Delete type designations via operations
Patrick Plitzner
12:32 PM Revision 864b7020 (taxeditor): ref #8222 Fix potential NPE + cleanup
Patrick Plitzner
12:32 PM Revision b6609b9d (taxeditor): ref #8222 Add interface method for operation based editors
Patrick Plitzner
12:22 PM feature request #5873: Implement rights&roles for TaxEditor distribution editor
actually the distribution editor can be opened but the save throws a permission denied exception.
* We need a che...
Katja Luther
11:25 AM Revision fc3c16d6 (taxeditor): ref #8234: update editor after removing description element
Katja Luther
11:13 AM Revision 3ce70d3c (taxeditor): ref #8234:avoid NPE
Katja Luther
10:25 AM Revision dc4dc742 (taxeditor): fix #8234: moveDescriptionOperation should be executed while saving
Katja Luther
09:14 AM Revision 2e789748 (cdmlib): ref #8234 Remove description element when moving it
Patrick Plitzner
09:05 AM feature request #7865 (Resolved): Remaining factual data view label issues
The titlecache issue is solved. Some other issues came up while fixing this ticket -> #8234 Patrick Plitzner
09:02 AM Revision 48c401d4 (cdmlib): ref #7865 Fix titleCache generation when moving taxon descriptions
Patrick Plitzner
09:01 AM Revision 61100aa0 (taxeditor): ref #7865 Change method signature for checking for dirty taxa editors
Patrick Plitzner
07:59 AM Revision 705a9fe6 (taxeditor): ref #8146 Show term type of term trees in details view
Patrick Plitzner
07:52 AM feature request #6413 (Resolved): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
I created a new ticket for the remaining issues. Can we close this ticket now? -> #8233 Patrick Plitzner

04/09/2019

02:37 PM bug #7541: Insufficient rights lead to missing focus in name editor
Andreas Müller wrote:
> Hmm, can someone explain what the expected behavior is? To me it sounds strange that the nam...
Katja Luther
01:58 PM Revision 45f85b39 (taxeditor): ref #8228: fix NPE
Katja Luther
01:34 PM Revision 68d759c3 (taxeditor): ref #8124: remaining issues for name facts (protologue filter)
Katja Luther
01:27 PM Revision 3154c930 (taxeditor): Adapt to service layer change
Patrick Plitzner
01:26 PM Revision 92283763 (cdmlib): Convert more service methods to only use UUID
- fix creation service method Patrick Plitzner
12:49 PM Revision e64a46d1 (cdmlib): Convert service methods to only use UUID
Patrick Plitzner
12:42 PM feature request #8136: Implement sources for type designations in TaxEditor
Do you have an idea how to improve the selection? Katja Luther
12:19 PM Revision 77658c00 (taxeditor): ref #3836: minor
Katja Luther
12:13 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
now the modifier section is shown only if the feature has recommended modifier voc, so it is hided for all features i... Katja Luther
12:13 PM Revision aef87bc3 (taxeditor): ref #3836: minor
Katja Luther
12:07 PM feature request #8096 (Resolved): Implement CacheUpdater as long running task with correct progress monitoring
the two colons are fixed and for a better result there is a new ticket. Katja Luther
11:09 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Andreas Müller wrote:
> If running on multiple classes the update result returns the total number of updated objects...
Katja Luther
11:07 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Andreas Müller wrote:
> Katja Luther wrote:
> > the problem for references is that if cacheStrategy.getFullAbbrevTi...
Katja Luther
12:05 PM Revision 4624cd0d (taxeditor): ref #8096: remove doubled colon
Katja Luther
11:20 AM feature request #8124 (Resolved): Activate Name Facts in Taxeditor
the issues mentioned above are fixed and for the bulk editor issue a new ticket is created. So I close this ticket. Katja Luther
11:17 AM feature request #8124: Activate Name Facts in Taxeditor
Andreas Müller wrote:
> It would be nice to have a separate label to point out that we are working on name level, no...
Katja Luther
09:25 AM feature request #8124: Activate Name Facts in Taxeditor
Katja Luther wrote:
> Andreas Müller wrote:
> > In bulk editor there are 2 strange behaviors which are maybe more b...
Katja Luther
09:12 AM feature request #8124: Activate Name Facts in Taxeditor
Andreas Müller wrote:
> In bulk editor there are 2 strange behaviors which are maybe more bulk editor related then n...
Katja Luther
11:11 AM feature request #8232 (New): Show updated objects of cache updater separately
Currently, the result of the cache updater is shown as one number but should be separated by the different kind of ob... Katja Luther
10:59 AM bug #8231 (Worksforme): Name relation non
Registration Id: http://phycobank.org/101367
Eunotia kurtkrammeri Kulikovskiy, Lange-Bert., Genkal & Witkowski,
[...
Wolf-Henning Kusber
10:36 AM Revision 5fcf8d0f (taxeditor): ref #8124: change label for name facts
Katja Luther
10:16 AM Revision 5ce89578 (taxeditor): ref #8124: do not show move description(element) menu item for name facts
Katja Luther
10:09 AM feature request #8230 (Closed): NameTypePopupEditor: genus selectable as the name type for higher ranks
If typified name rank higher than genus, allow genus to be selected as the name type.
[currently only species are ...
Wolf-Henning Kusber
09:53 AM Revision 9a7abbee (taxeditor): refresh details when changing concept type
Katja Luther
09:36 AM bug #8229 (Closed): reload of the bulkeditor does not work correctly
running a new search does not refresh the objects correctly. The bulk editor needs to be closed and reopened. Katja Luther
09:34 AM bug #8228 (Resolved): refresh of details for same object in different bulk editors does not work
this can be fixed with an additional check for the identity of the selection providing part and the activePart, when ... Katja Luther
09:32 AM bug #8228 (Closed): refresh of details for same object in different bulk editors does not work
opening two bulk editors and set the focus on the same objects. When switching between the two bulk editors does not ... Katja Luther
09:33 AM Revision 233fc0af (taxeditor): ref #8228: fix refresh in details view
Katja Luther
08:58 AM Revision 5f352a56 (taxeditor): ref #3836: show modifier part only if recommended modifier voc exist
Katja Luther
08:50 AM Revision 6ec2be5e (cdmlib): ref #8124: adapt TaxonNameDescriptionDefaultCacheStrategy
Katja Luther

04/08/2019

06:55 PM bug #8211 (Resolved): Trigger new search when clicking on identifier search
Andreas Müller
06:53 PM feature request #7428 (Closed): Open issues for updating open data while subtree is updated
I tested with publish flag. It also worked for both name editor and bulk editor. Andreas Müller
06:40 PM bug #7541 (Feedback): Insufficient rights lead to missing focus in name editor
Hmm, can someone explain what the expected behavior is? To me it sounds strange that the name editor is not editable ... Andreas Müller
06:10 PM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Katja Luther wrote:
> the problem for references is that if cacheStrategy.getFullAbbrevTitleString(this) returns nul...
Andreas Müller
05:50 PM feature request #8096 (Feedback): Implement CacheUpdater as long running task with correct progress monitoring
If running on multiple classes the update result returns the total number of updated objects. Better we had them sepa... Andreas Müller
05:48 PM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Katja Luther wrote:
> Andreas Müller wrote:
> > When running on references (in rem_conf_am) I only get no task show...
Andreas Müller
10:36 AM feature request #8096 (Resolved): Implement CacheUpdater as long running task with correct progress monitoring
there are problems with objects having a null titleCache because they get a new titlecache while saving.
I think we...
Katja Luther
05:37 PM feature request #8124: Activate Name Facts in Taxeditor
In bulk editor there are 2 strange behaviors which are may be more bulk editor related then name facts related.
If...
Andreas Müller
05:25 PM feature request #8124 (Feedback): Activate Name Facts in Taxeditor
I wonder if we should explicitly remove "Protologue" from the feature list. Protologues will soon be handled differen... Andreas Müller
05:23 PM feature request #8124: Activate Name Facts in Taxeditor
It would be nice to have a separate label to point out that we are working on name level, not taxon level now. E.g Na... Andreas Müller
05:19 PM feature request #8124: Activate Name Facts in Taxeditor
When entering via NameDetailsView and name selection the facts view still contains menu element "Move fact data set t... Andreas Müller
05:19 PM bug #8227: PhycoBank UI and Safari
TypeSpecimenEditor
Fehler: "1 field incomplete or invalid"
Mouse over beim Feld Specimen (das als ausgewählt richti...
Wolf-Henning Kusber
04:58 PM bug #8227 (Worksforme): PhycoBank UI and Safari
Release-Version als "Curator" verwendet (8 April 2019)
OS 10.11.6 mit Safari V 11.1.2
Login, logout, List Funkt...
Wolf-Henning Kusber
04:53 PM bug #8111 (Closed): User selection dialog for groups does not filter out existing users
seems to work now Andreas Müller
03:03 PM bug #8111 (Resolved): User selection dialog for groups does not filter out existing users
Andreas Müller wrote:
> Deleting users from group does not work (after reload it is still there)
sorry missed to ...
Katja Luther
02:19 PM bug #8111 (Feedback): User selection dialog for groups does not filter out existing users
Deleting users from group does not work (after reload it is still there) Andreas Müller
11:49 AM bug #8111: User selection dialog for groups does not filter out existing users
The problem is solved by mergeing the users added or deleted to a group while saving the bulk editor model.
please r...
Katja Luther
11:48 AM bug #8111 (Resolved): User selection dialog for groups does not filter out existing users
Applied in changeset commit:taxeditor|92749440c55d13272b4d45fee634d44c0db26dc0. Katja Luther
03:55 PM feature request #3836 (Feedback): Implement modifiers and modifying text for Description Elements in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Only the recommended modifiers should be shown for the given featur...
Andreas Müller
03:28 PM feature request #3836 (Resolved): Implement modifiers and modifying text for Description Elements in TaxEditor
for description elements only the recommended modifiers are shown. configurability is moved to a new ticket. Katja Luther
03:26 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
Andreas Müller wrote:
> We may also discuss if the modifiers should only be shown if the recommended modifier enumer...
Katja Luther
02:51 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
Andreas Müller wrote:
> Only the recommended modifiers should be shown for the given feature (Feature.recommendedMod...
Katja Luther
02:12 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
We may also discuss if the modifiers should only be shown if the recommended modifier enumeration is not empty.
Al...
Andreas Müller
02:10 PM feature request #3836 (Feedback): Implement modifiers and modifying text for Description Elements in TaxEditor
Only the recommended modifiers should be shown for the given feature (Feature.recommendedModifierEnumeration) - sorry... Andreas Müller
03:39 PM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> After choosing a specimen for the type designation it is sometimes impossible to select the ...
Katja Luther
01:46 PM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> If Status is completely deleted the reference is not deleted but should (similar to choosing...
Katja Luther
01:34 PM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> When having 2 type designations and the second one is not yet saved and deleting the second ...
Katja Luther
12:54 PM feature request #8136: Implement sources for type designations in TaxEditor
When having 2 type designations and the second one is not yet saved and deleting the second one both type designation... Andreas Müller
12:50 PM feature request #8136: Implement sources for type designations in TaxEditor
After choosing a specimen for the type designation it is sometimes impossible to select the type designation to show ... Andreas Müller
12:42 PM feature request #8136 (Feedback): Implement sources for type designations in TaxEditor
If Status is completely deleted the reference is not deleted but should (similar to choosing e.g. holotype) I guess.
...
Andreas Müller
03:36 PM feature request #8226: make modifiers for description elements configurable
copied from #3836
We may also discuss if the modifiers should only be shown if the recommended modifier enumeratio...
Andreas Müller
03:25 PM feature request #8226 (Closed): make modifiers for description elements configurable
Katja Luther
03:30 PM bug #8200 (Resolved): Changing title(cache) for factual data set not possible
but as this is the general behaviour for titlecaches we may close this ticket? Because it works like titleCaches in a... Katja Luther
03:24 PM bug #8225: Deleting one of two type designations removes both
Patrick will fix ticket #8222, I think this will solve this problem, too. Because remove of a type designation is don... Katja Luther
03:04 PM bug #8225: Deleting one of two type designations removes both
This needs to be fixed before release Andreas Müller
01:34 PM bug #8225 (Closed): Deleting one of two type designations removes both
When having 2 type designations and the second one is not yet saved and deleting the second one both type designation... Katja Luther
03:18 PM Revision 77d90448 (taxeditor): ref #3836: add only recommended modifiers to modifier combo
Katja Luther
03:02 PM Revision ea46d0e4 (taxeditor): ref #8111: handle event when removing user in group
Katja Luther
03:01 PM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
If 2 existing type designations have the same field unit they should not be listed both in the "base type" list IMO. ... Andreas Müller
02:55 PM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
If I enter a type designation and then add a duplicate without saving in between the first type designation gets lost... Andreas Müller
02:52 PM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
Any kind of accession number should not be required as sometimes such a number does not exist, but only collection an... Andreas Müller
02:48 PM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
Have we on purpose decided to only show accession number? Shouldn't we also allow barcode and/or catalogue number? Ot... Andreas Müller
02:46 PM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
After selecting the collection it would be a very helpful feature to show already existing specimen candidates for th... Andreas Müller
02:43 PM feature request #6413 (Feedback): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
We should change order, first collection, then accession number.
Also the status are not sorted. Order should be s...
Andreas Müller
11:52 AM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
now the button is available after creating the first type designation and the creation of the clone works fine.
Katja Luther
02:24 PM Revision 73a8b27a (taxeditor): ref #6413 small change in German translation for type duplicate
Andreas Müller
01:46 PM Revision a53422d5 (taxeditor): ref #8136: fix handling if status is set to null
Katja Luther
01:25 PM feature request #8147 (Closed): Add "plural" to representation detail element
Created new ticket #8224 Patrick Plitzner
12:17 PM feature request #8147 (Feedback): Add "plural" to representation detail element
The plural issue fully works now.
However there is an issue with the translation editor. When opening the transla...
Andreas Müller
01:25 PM bug #8224 (Worksforme): Misleading initial language selection in TranslationWizard
copied from #8147:
When opening the translation editor the first language in the list of available languages is sh...
Patrick Plitzner
01:24 PM Revision c1b8ad39 (taxeditor): ref #8058: fix common name language preference and save emtpy string if all terms are selected
Katja Luther
01:24 PM Revision 0bf51b59 (taxeditor): ref #8058: fix common name language preference and save emtpy string if all terms are selected
Katja Luther
01:20 PM feature request #7865 (Feedback): Remaining factual data view label issues
When I move a description (with no protected title cache) from 1 taxon to another taxon now the label of the new desc... Andreas Müller
01:16 PM Revision 12cf574a (cdmlib): ref #8088: avoid NPE in saveTaxonNode
Katja Luther
01:10 PM bug #8088 (In Progress): Open taxon node wizard issues
moved all fixed issues to a new ticket Katja Luther
01:05 PM bug #8088: Open taxon node wizard issues
Sorry, the review should be done only on the hotfix tasks, I will split this ticket. Katja Luther
01:04 PM bug #8088: Open taxon node wizard issues
Andreas Müller wrote:
> >Classification selection for top level taxa
>
> This is not yet fixed
At least for ne...
Andreas Müller
12:59 PM bug #8088 (Feedback): Open taxon node wizard issues
>Classification selection for top level taxa
This is not yet fixed
Andreas Müller
01:09 PM bug #8223 (Resolved): Urgent TaxonNode wizard issues
Katja Luther
01:08 PM bug #8223: Urgent TaxonNode wizard issues
Hallo,
bekomme diese Fehlermeldung beim Anlegen eines neuen Taxons.
viele Grüße und schöne WE
Nadja
~~~ tex...
Katja Luther
01:08 PM bug #8223: Urgent TaxonNode wizard issues
Ich habe versucht das Taxon eines Taxonnodes zu ändern und bekam den Fehler unten.
Gibt es dafür schon ein Ticket? K...
Katja Luther
01:07 PM bug #8223 (Resolved): Urgent TaxonNode wizard issues
Fixes for Hotfix 5.5.1:
* TOE (see comment 1) and LLE (see comment 2) in saveNewTaxonNode fixed
* Taxon Selection...
Katja Luther
12:25 PM Revision 46d9527b (taxeditor): ref #8136 slightly changed lectotype reference removal warning
Andreas Müller
12:07 PM bug #8148 (Closed): Login Dialog cuts off information
Seems to be fixed Andreas Müller
11:47 AM Revision 92749440 (taxeditor): fix #8111: fix saving problem for members in group
Katja Luther
10:30 AM Revision 1a1cc8f8 (cdmlib): ref #8096: smaller changes for update caches
Katja Luther
10:30 AM Revision c4fa45c2 (cdmlib): add test for adding member to group
Katja Luther

04/05/2019

03:41 PM feature request #8146: Adapt taxeditor UI to structure and property term type
Katja Luther wrote:
>
> Maybe it would be nice to have a possibility to distinguish between the term tree types. n...
Patrick Plitzner
09:59 AM feature request #8146 (Feedback): Adapt taxeditor UI to structure and property term type
tested on nightly:
open term editor for structures, create a new vocabulary, try drag&drop from one vocabulary to ...
Katja Luther
03:38 PM bug #8222 (Closed): Deleting a type designation from a name is directly persisted
The name editor is set to dirty but when closing it without saving the designation is deleted anyway. Patrick Plitzner
03:23 PM feature request #6413 (Resolved): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
The buttons are now updated with every add or remove.
The icon is from the Eclipse icon set and it is standard sized.
Patrick Plitzner
10:48 AM feature request #6413 (Feedback): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
Katja Luther
10:47 AM feature request #6413: [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name
![](picture299-1.png)
the item is really small and after adding the first typedesignation the view is not updated,...
Katja Luther
02:39 PM Revision cec74f11 (taxeditor): ref #6413 Update toolbar when adding/deleting type designations
Patrick Plitzner
02:39 PM Revision 5ef12561 (taxeditor): ref #6413 Use UUIDS for service method parameters
Patrick Plitzner
02:34 PM Revision 8b7b8537 (cdmlib): ref #6413 Replace service method parameters with UUIDs
Patrick Plitzner
01:53 PM feature request #8150 (Closed): Allow editing the representation label of characters in details view
works fine now. Katja Luther
10:44 AM feature request #8150 (Resolved): Allow editing the representation label of characters in details view
Katja Luther wrote:
> in the character editor the label should be updated, too.
This is now fixed
Patrick Plitzner
09:10 AM feature request #8150 (Feedback): Allow editing the representation label of characters in details view
in the character editor the label should be updated, too. Katja Luther
01:37 PM bug #8148: Login Dialog cuts off information
this is fixed now. Katja Luther
01:31 PM bug #8148 (Resolved): Login Dialog cuts off information
Applied in changeset commit:taxeditor|deec2311a69183f731cc1e6ddf7f967cba6c0241. Katja Luther
01:37 PM Revision 9e35891c (taxeditor): fix #8148: add widthHint to advanced composite
Katja Luther
01:31 PM Revision deec2311 (taxeditor): fix #8148: add widthHint to styledTextfield
Katja Luther
01:26 PM Revision 63878e5a (taxeditor): ref #8136: externalization
Katja Luther
01:18 PM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
the problem for references is that if cacheStrategy.getFullAbbrevTitleString(this) returns null, the abbrevTitleCache... Katja Luther
11:10 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Katja Luther wrote:
> Andreas Müller wrote:
> > Also when rerunning on references I always get the same result (upd...
Katja Luther
10:20 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Andreas Müller wrote:
> Also when rerunning on references I always get the same result (updated objects 2669), secon...
Katja Luther
10:09 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Andreas Müller wrote:
> When running on references (in rem_conf_am) I only get no task shown:
>
now it looks ...
Katja Luther
12:46 PM Revision 09015fb4 (taxeditor): ref #8136: externalization
Katja Luther
12:20 PM feature request #8136: Implement sources for type designations in TaxEditor
Katja Luther wrote:
> now there is a message asking if the user really wants to change the type away from lectotype ...
Katja Luther
12:20 PM feature request #8136 (Resolved): Implement sources for type designations in TaxEditor
now there is a message asking if the user really wants to change the type away from lectotype when a citation exist. Katja Luther
11:19 AM feature request #8136: Implement sources for type designations in TaxEditor
Validation already exists by the way #8139 but needs validation framework in place to be available Andreas Müller
11:10 AM feature request #8136 (Feedback): Implement sources for type designations in TaxEditor
To be honest, simply removing the reference is not my preferred solution. Is there a reason why we can't do like with... Andreas Müller
09:19 AM feature request #8136: Implement sources for type designations in TaxEditor
Tested on nightly: The reference of any *lectotype is removed when switching the designation status to any non-lectot... Patrick Plitzner
09:03 AM feature request #8136 (Resolved): Implement sources for type designations in TaxEditor
Katja Luther
08:55 AM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > But maybe this should be handled in the library? When updating a ty...
Katja Luther
12:17 PM Revision b0ed30f0 (taxeditor): ref #8136: add warning message when changing type away from lectotype and citation exist
Katja Luther
11:42 AM feature request #8175 (Closed): add name facts to cdm light export
Andreas Müller wrote:
> I think if you have tested it intensively it may be correct. For me it would take a lot of t...
Katja Luther
11:22 AM feature request #8175 (Feedback): add name facts to cdm light export
I think if you have tested it intensively it may be correct. For me it would take a lot of time to test.
Only ques...
Andreas Müller
09:07 AM feature request #8175: add name facts to cdm light export
tested on nighlty with rem_conf_am:
created a namefact for Dianthella and exported subtree of Facchinia in classif...
Katja Luther
11:26 AM feature request #7428 (Resolved): Open issues for updating open data while subtree is updated
I tested again just now and it works as expected. The bulk editor also updates correctly Patrick Plitzner
10:04 AM feature request #7428: Open issues for updating open data while subtree is updated
there was an update yesterday (Revision 78bbc734), maybe you tested before? I tested again on nightly and the bulkedi... Katja Luther
11:14 AM feature request #8139: [Rule] Validate lectotype sources
no idea why this was in model change milestone Andreas Müller
11:11 AM bug #8115 (Closed): NPE when moving factual data
This now works as expected Patrick Plitzner
10:38 AM bug #8115 (Resolved): NPE when moving factual data
now drag & drop is only possible when neither the target nor the source description containing not persisted elements. Katja Luther
10:51 AM feature request #8044: Add "Move to..." menu to term editor
This is still an experimental feature which only shows up when the flag is set. I would either move this ticket to th... Patrick Plitzner
09:15 AM feature request #8044 (Feedback): Add "Move to..." menu to term editor
I would name it move feature as child or something like this because in the wizard you can choose the parent. Maybe y... Katja Luther
10:39 AM Revision 049fc82f (taxeditor): ref #8150 Refresh label in CharacterEditor when editing in detail view
Patrick Plitzner
10:29 AM task #8162 (Closed): Move term related classes from model.common to model.term
I cannot see any more term related classes in the common package Patrick Plitzner
09:31 AM task #8162: Move term related classes from model.common to model.term
looks fine. Katja Luther
09:28 AM bug #8190: Default FeatureTree throws exception
Seems to work.
I added some characters to rem_conf_am and got no exception when opening/working with factual data view.
Katja Luther
09:22 AM feature request #8153 (Closed): Adapt cdmlib to FeatureNode/FeatureTree model changes
I had a look on the changesets and it looks ok, so I close this ticket. For the generics we can open a new ticket. Katja Luther
09:10 AM bug #8088: Open taxon node wizard issues
The exception when creating a new taxon is now also fixed. Tested on nightly Patrick Plitzner
08:50 AM bug #8088 (Resolved): Open taxon node wizard issues
Katja Luther
09:03 AM feature request #8147 (Resolved): Add "plural" to representation detail element
Fixed the plural field and the "Finish" button Patrick Plitzner
09:00 AM feature request #7865: Remaining factual data view label issues
Works as excpected.
Tested on nightly. Added a factual data set and open the lock to edit the label, after save the ...
Katja Luther
08:45 AM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor
Tested on nightly:
* Created a specimen description element and set modifier and Modifying text
* Closed and re-o...
Patrick Plitzner

04/04/2019

06:06 PM Revision c4224185 (taxeditor): ref #8147 Code cleanup
Patrick Plitzner
06:06 PM Revision a06ac8f6 (taxeditor): ref #8147 Enable "Finish" only if any data is present
Patrick Plitzner
04:32 PM Revision 78bbc734 (taxeditor): update bulkeditor if element of list of taxa contained in model
Katja Luther
03:18 PM Revision 2ba74e7b (taxeditor): ref #8147 Store representation if only plural is set
Patrick Plitzner
03:18 PM Revision b014556e (taxeditor): Show path of structure and property terms in character details view
Patrick Plitzner
02:56 PM feature request #8147: Add "plural" to representation detail element
What I did:
* open any term, e.g. Feature "Description" in term editor
* open translation editor
* choose German...
Andreas Müller
09:51 AM feature request #8147: Add "plural" to representation detail element
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > It works in Details View. In Translation Editor the value is no...
Andreas Müller
09:25 AM feature request #8147: Add "plural" to representation detail element
Andreas Müller wrote:
> It works in Details View. In Translation Editor the value is not stored if only plural is ad...
Patrick Plitzner
11:47 AM bug #8111: User selection dialog for groups does not filter out existing users
Andreas Müller wrote:
> I tested with the latest version. Adding a group to a member seems to work correctly. Adding...
Katja Luther
11:42 AM bug #8111: User selection dialog for groups does not filter out existing users
I tested with the latest version. Adding a group to a member seems to work correctly. Adding a user to a group is not... Andreas Müller
11:09 AM bug #8111: User selection dialog for groups does not filter out existing users
Can you write a test which shows that this problem is really due to merge?
By the way when calling merge saveOrUpd...
Andreas Müller
10:55 AM bug #8111: User selection dialog for groups does not filter out existing users
the selection dialog is fixed, but the saving still does not work. Katja Luther
10:41 AM bug #8111: User selection dialog for groups does not filter out existing users
Andreas Müller wrote:
> Katja Luther wrote:
> > Another point, the cascading from group to member is not implemente...
Katja Luther
10:38 AM bug #8111: User selection dialog for groups does not filter out existing users
Katja Luther wrote:
> Another point, the cascading from group to member is not implemented. Adding or deleting a mem...
Andreas Müller
10:19 AM bug #8111: User selection dialog for groups does not filter out existing users
Another point, the cascading from group to member is not implemented. Adding or deleting a member is not saved when s... Katja Luther
08:23 AM bug #8111: User selection dialog for groups does not filter out existing users
The dialog is created in SelectionDialogFactory. But `null` is passed as an argument which leads to this exception. @... Patrick Plitzner
11:34 AM bug #8221 (New): When changing nomenclatural code the name detail elements are not available anymore
when changing the nomenclatural code the name details are not available anymore, reopening the taxon solves the probl... Katja Luther
11:30 AM Revision 428a2961 (taxeditor): ref #8096: deduplicate message in progress bar
Katja Luther
11:29 AM feature request #8136: Implement sources for type designations in TaxEditor
Katja Luther wrote:
> But maybe this should be handled in the library? When updating a typedesignation check whether...
Andreas Müller
11:06 AM feature request #8136: Implement sources for type designations in TaxEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > tested on nightly.
> >
> > Changing to any *lectotype will s...
Katja Luther
10:55 AM feature request #8136 (Feedback): Implement sources for type designations in TaxEditor
Patrick Plitzner wrote:
> tested on nightly.
>
> Changing to any *lectotype will show the reference related eleme...
Andreas Müller
11:20 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
Also when rerunning on references I always get the same result (updated objects 2669), second time I would expect 0.
...
Andreas Müller
11:17 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring
When running on references (in rem_conf_am) I only get no task shown:
![](picture787-1.png)
Andreas Müller
11:13 AM feature request #8096 (Feedback): Implement CacheUpdater as long running task with correct progress monitoring
I get a strange duplication of task and progress now:
![](picture686-1.png)
Andreas Müller
11:09 AM Revision 310480f4 (taxeditor): ref #8136: remove citation if changed away from lectotype
Katja Luther
10:53 AM Revision 2040fc2c (taxeditor): ref #8111: fix selection of user
Katja Luther
10:09 AM Revision 423bae12 (cdmlib): deprecate isNomenclaturallyRelevant
Andreas Müller
10:05 AM Revision 3f0fc6a2 (cdmlib): javadoc for DefaultMatchStrategy
Andreas Müller
09:57 AM bug #8088: Open taxon node wizard issues
this should be fixed with the last commit in cdmlib Katja Luther
09:55 AM Revision 30eb4609 (cdmlib): ref #8088: fix LIE in saveTaxonNode
Katja Luther
09:38 AM Revision 7a7ac81c (taxeditor): revert changes in cdmServiceCacher
Katja Luther
09:22 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
Andreas Kohlbecker wrote:
> in this case the following properties are changed behind the scenes:
>
>
> ~~~
> ...
Andreas Müller
09:12 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission
Andreas Kohlbecker wrote:
> Does this come from the `DefaultMatchStrategy`?
>
> What is this `DefaultMatchStrateg...
Andreas Müller
09:13 AM bug #7541: Insufficient rights lead to missing focus in name editor
I tested on nightly and rem_conf_am:
* Created a user "noTaxon" and a group "rightless" with two authorities ROLE_...
Patrick Plitzner
09:13 AM Revision c2e4881e (taxeditor): changes in CdmServerInfo
Katja Luther
08:33 AM feature request #8124: Activate Name Facts in Taxeditor
Tested on nightly:
* I selected a name in the bulk editor
* Creation of name description works
* The list of ava...
Patrick Plitzner
07:54 AM bug #8211: Trigger new search when clicking on identifier search
Andreas Müller wrote:
> For me it does not work. I tested on test/euromed.
>
> * Open reference selection dialog...
Patrick Plitzner
07:45 AM feature request #8146: Adapt taxeditor UI to structure and property term type
I copied additivity_ontology to my local DBs and connected with the taxeditor. Seems like it worked.
![](picture93...
Patrick Plitzner
 

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