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From 05/15/2018 to 06/13/2018

06/13/2018

06:08 PM bug #7467 (Closed): taxon name parts lookup method with support for wildcard searches
Andreas Kohlbecker
06:06 PM bug #7467 (Resolved): taxon name parts lookup method with support for wildcard searches
Applied in changeset commit:cdmlib|9fc2a8a0de9a103ea0dbb1e9391000753b744ae2. Andreas Kohlbecker
06:06 PM Revision 9fc2a8a0 (cdmlib): fix #7467 taxon name parts lookup method with support for wildcard searches, TaxonNameParts and filter
Andreas Kohlbecker
06:06 PM Revision 396a7563 (cdmlib): updating deprecation information on methods using int for hibernare result count which is now long
Andreas Kohlbecker
06:06 PM Revision 4ac32a89 (cdmlib): startH2Server documentation
Andreas Kohlbecker
06:06 PM Revision b7fa2296 (cdmlib): fixing problems with startH2Server documentation
Andreas Kohlbecker
06:06 PM Revision 990226a3 (cdmlib): fixing problems with startH2Server and providing feedback to developers on start up
Andreas Kohlbecker
05:48 PM Revision 7adc925d (cdm-vaadin): ref #7338 TaxonNameEditor mode VALIDATE_AGAINST_HIGHER_NAME_PART implemented for genusOrUninomial
Andreas Kohlbecker
03:12 PM Revision 1884064f (taxeditor): cleanup
Katja Luther
03:05 PM Revision 8880b9b3 (taxeditor): revert regression
Katja Luther
03:01 PM Revision c2ce61f1 (taxeditor): Close name editor for moved taxon nodes
Patrick Plitzner
03:00 PM task #7474: Unify code base for moving taxon nodes
to move several nodes was available, this was a merge problem, I will commit the fix of the regression Katja Luther
02:48 PM task #7474 (New): Unify code base for moving taxon nodes
There are two ways to move taxon nodes:
* via drag and drop
* via context menu
They do not entirely use the sa...
Patrick Plitzner
02:45 PM feature request #7422: Set nom. illeg as default in NomenclaturalStatusType ComboBox
please review Katja Luther
02:44 PM feature request #7422 (Resolved): Set nom. illeg as default in NomenclaturalStatusType ComboBox
Applied in changeset commit:taxeditor|0efab2895d93de6bf45d1375b7494fe2c96f33ac. Katja Luther
02:44 PM Revision 0efab289 (taxeditor): fix #7422: if nomenclatural status has no type, don't change selected type in details view
Katja Luther
02:31 PM Revision 13d6411b (taxeditor): show authorship cache as title of authorship details section
Katja Luther
02:26 PM Revision 35b7d4f5 (taxeditor): Only add description element with protologue feature to section
Patrick Plitzner
02:21 PM Revision f36d2451 (taxeditor): ref #7040 Speed up rendering of details view
- avoid redundant reflowing of composite when editing Patrick Plitzner
02:19 PM feature request #7473 (New): Replace PropertyChangeEvent architecture with e4 event bus in details view
With the current architecture many redundant events are generated to refresh the details view. This can be optimized ... Patrick Plitzner
02:09 PM feature request #7463 (Resolved): Move taxonnodes should be available for multiple selection
please review Katja Luther
01:36 PM Revision 11fcf6af (cdmlib): ref #3560 fix wrong method call in BaseController
Andreas Müller
01:01 PM bug #7472: lazy loading exception for MAN with type specimen
please review if everything is solved now. Katja Luther
01:00 PM bug #7472 (Resolved): lazy loading exception for MAN with type specimen
Applied in changeset commit:taxeditor|26cc98f0fe93d159407c4ee093034ae1360b6755. Katja Luther
12:53 PM bug #7472 (Closed): lazy loading exception for MAN with type specimen
mail WB:
bei N. sumatrana in der Flora Malesiana Concepts Klassifikation wollte ich das (falsche) p.p. Synonym Nep...
Katja Luther
12:57 PM Revision 26cc98f0 (taxeditor): fix #7472: fix lazy loading exceptions for MAN with type specimen
Katja Luther
10:05 AM Revision a9bea304 (taxeditor): ref #7010 Adapt datasource handlers for multiple selection
Patrick Plitzner
10:05 AM Revision c6c263b6 (taxeditor): ref #7010 Adapt feature tree handlers for multiple selection
Patrick Plitzner
10:05 AM Revision deb3ab1f (taxeditor): ref #7010 Adapt term editor handlers for multiple selection
Patrick Plitzner
10:05 AM Revision f853dd5b (taxeditor): ref #7010 Adapt taxon navigator handlers for multiple selection
Patrick Plitzner
10:05 AM Revision 309a818c (taxeditor): ref #7010 Adapt poly key handlers for multiple selection
Patrick Plitzner
10:05 AM Revision dcf7fd09 (taxeditor): ref #7010 Adapt molecular handlers for multiple selection
Patrick Plitzner
02:37 AM Revision 34337128 (cdmlib): ref #3560 remove unpublished synonyms from taxon.synonymy (handle homotypic syns correctly)
Andreas Müller
02:29 AM Revision 91eb42ad (cdmlib): cleanup
Andreas Müller
02:26 AM Revision 7cfcc8f1 (cdmlib): ref #3560 handle access denied for unpublished data in BaseController.doGet
Andreas Müller
02:03 AM Revision 3e01938c (cdmlib): ref #3560 remove unpublished synonyms from taxon.synonymy (fix)
Andreas Müller
01:50 AM Revision 1e9f87b1 (cdmlib): ref #3560 handle access denied for unpublished data in some TaxonController methods
Andreas Müller
01:49 AM Revision 41b7b3a2 (cdmlib): cleanup
Andreas Müller
01:02 AM Revision 92a5fd30 (cdmlib): ref #3560 remove unpublished synonyms from taxon.synonymy
Andreas Müller

06/12/2018

09:58 PM bug #5477 (Resolved): lucene index not updated in all cases after Taxon.addMisappliedName
Seems to be fixed with using @ContainedIn on relationsToThisTaxon and relationsfromThisTaxon.
Please review.
Andreas Müller
09:53 PM Revision 1771f383 (cdmlib): ref #3560, ref #5477 fix missing lucene index update for synonyms and misapplied names
Andreas Müller
09:53 PM Revision 37b63de0 (cdmlib): ref #3560 further improve full text taxonAndName search for publish flag, including tests
Andreas Müller
09:53 PM Revision 1119bb9e (cdmlib): cleanup
Andreas Müller
09:53 PM Revision ea654742 (cdmlib): potentially fix uuid query factory method
Andreas Müller
09:53 PM Revision 0f99e0f2 (cdmlib): cleanup
Andreas Müller
09:53 PM Revision ed06021d (cdmlib): ref #5974 fully remove multi value field logic from AcceptedTaxonBridge
Andreas Müller
06:34 PM bug #7471 (New): Invalid use of DefaultPager
found a couple of wrong usages of the DefaultPagerImpl constructor in `NameServiceImpl`:
~~~java
DefaultPagerImpl...
Andreas Kohlbecker
04:26 PM Revision 614f8fb3 (cdmlib): adapt test
Katja Luther
04:22 PM Revision 68cbd570 (cdmlib): add test for misappliedname problem with type desinations
Katja Luther
04:19 PM Revision 882037f9 (taxeditor): fix LazyLoading exception for typeSpecimen of MAN
Katja Luther
02:15 PM Revision 95e2bd9c (cdmlib): ref #3560 try to add publish to synonym search in findTaxaAndNamesByFullText (probably not working yet)
Andreas Müller
02:07 PM Revision b5e2a640 (cdmlib): cleanup
Andreas Müller
01:31 PM Revision 525e5ef8 (cdmlib): ref #5974 fully remove multi value field logic from AcceptedTaxonBridge
Andreas Müller
01:31 PM Revision b476aa03 (cdmlib): cleanup
Andreas Müller
10:38 AM feature request #7470: Verbatim type designation information
WGB:
das nochmal mit erweitertem Empfängerkreis. Katja, wie wird denn jetzt eigentlich die Type designation im CDM...
Andreas Müller
10:29 AM feature request #7470: Verbatim type designation information
WGB:
ein modernes Zitat: Nepenthes armin Jebb & Cheek:
“Type: Argent & Reynoso 8936 (holotype K; isotypes E, ...
Andreas Müller
10:15 AM feature request #7470 (Closed): Verbatim type designation information
WGB:
Es ist häufig notwendig, die Typus-Angabe aus dem Protolog verbatim zu zitieren, da die atomisierte Informati...
Andreas Müller
10:13 AM Revision dc852e32 (cdmlib): smaller changes in taxon list import
Katja Luther
09:47 AM Revision 7d2818cc (cdmlib): fix in getUuidAndTitleCache
Katja Luther

06/11/2018

08:36 PM Revision f52fd31a (cdmlib): cleanup
Andreas Müller
06:50 PM bug #7469 (Closed): Updated script for individualCount column type in Postgres
Andreas Müller
06:49 PM bug #7469 (Resolved): Updated script for individualCount column type in Postgres
Applied in changeset commit:cdmlib|e82fdff4901ef8a8f99fffb1460cb143cd770567. Andreas Müller
06:19 PM bug #7469 (Closed): Updated script for individualCount column type in Postgres
The ColumnTypeChanger in update script does not work as expected for Postgres.
It throws exceptions that the opera...
Andreas Müller
06:49 PM Revision f4b6a73e (cdmlib): minor
Andreas Müller
06:48 PM Revision e82fdff4 (cdmlib): fix #7469 fix column type changer for Postgres
Andreas Müller
06:20 PM bug #7468 (Closed): Updated script for mediaCreated does not work for PostGreSQL
Andreas Müller
03:36 PM bug #7468 (Resolved): Updated script for mediaCreated does not work for PostGreSQL
Applied in changeset commit:cdmlib|870bdcfa2c6d2c6575ae87c56c9b9b2a17aa6745. Andreas Müller
03:03 PM bug #7468 (Closed): Updated script for mediaCreated does not work for PostGreSQL
In "Copy mediaCreated to new columns" the cast from timestamp to string does not work Andreas Müller
04:57 PM bug #7418: remaining specimen determination details view issues
Now, the element is resized after editing.
But I could not reproduce the scrolling bug.
Patrick Plitzner
04:56 PM bug #7418 (Resolved): remaining specimen determination details view issues
Applied in changeset commit:taxeditor|5e9ddd814e4727cce615ee85e7454060357fda3c. Patrick Plitzner
04:56 PM Revision 5e9ddd81 (taxeditor): fix #7418 resize EntitySelectionElement after editing
Patrick Plitzner
04:08 PM bug #7467: taxon name parts lookup method with support for wildcard searches
After discussing this with Andreas Müller we decided to create another more dedicated lookup method which won't load ... Andreas Kohlbecker
01:27 PM bug #7467 (Closed): taxon name parts lookup method with support for wildcard searches
implement a taxon name parts lookup method in the dao and service layer with support for wildcard searches.
If a n...
Andreas Kohlbecker
04:05 PM Revision f3faac87 (cdm-dataportal): Increase platform-site-skin version
Patrick Plitzner
04:05 PM Revision bc008051 (cdm-server): Increase platform-site-skin version
Patrick Plitzner
03:36 PM Revision 870bdcfa (cdmlib): fix #7468 fix update script for mediaCreated in PostGreSQL
Andreas Müller
03:33 PM Revision 85fe352f (cdmlib): Increase platform-site-skin version
Patrick Plitzner
03:11 PM Revision 896a9c40 (taxeditor): Increase platform-site-skin version
Patrick Plitzner
12:39 PM Revision 9753e115 (taxeditor): Show more detailed title when failing to create collection element
Patrick Plitzner
12:35 PM Revision d338a1e7 (taxeditor): Show more detailed message when failing to create collection element
Patrick Plitzner
12:35 PM Revision 79eb8142 (taxeditor): Fix potential NPE
Patrick Plitzner
12:35 PM bug #6296: Simple search for common names returns duplicates
duplicates are no longer returned, so this issue can in principle be closed, however, as last step cleaning up commen... Andreas Kohlbecker
12:29 PM Revision baecffc5 (cdmlib): remove confusing code
Katja Luther
12:24 PM feature request #4363 (Resolved): Show more informative message for unsupported specimen structures in specimen bulk editor
I don't have a test DB where there is a DerivedUnit with multiple FieldUnits.
But I added the possibility to show a ...
Patrick Plitzner
12:22 PM Revision e5c6119c (taxeditor): ref #4363 Add message parameter to EmptySection for detail information
Patrick Plitzner
11:56 AM Revision a136d47b (cdm-vaadin): fixing NPE introcdued in caf42d50
Andreas Kohlbecker
11:50 AM Revision d98abaef (taxeditor): ref #4302 Escape '&' in section titles
Patrick Plitzner
11:45 AM Revision 717636b2 (taxeditor): Fix potential NPE
Patrick Plitzner
10:13 AM Revision 7ac91dc0 (cdmlib): ref #3560 further publish flag issues for lucene search and first tests on lucene search
Andreas Müller

06/09/2018

12:27 AM Revision 3929ca28 (cdmlib): cleanup
Andreas Müller
12:23 AM Revision df72b543 (cdmlib): ref #3560 fix pathFrom in classification service impl
Andreas Müller

06/08/2018

08:11 PM Revision 4132369c (cdm-vaadin): TextFieldNFix trim empty string to null - final FIX
Andreas Kohlbecker
06:02 PM bug #7351 (Worksforme): LIE (LazyInitializationException) when opening SpecimenTypeDesignationWorkingsetEditor
This problem no longer occurs, it apparently has been solved meanwhile. Andreas Kohlbecker
05:57 PM feature request #7253 (Duplicate): TaxonNameEditor mode replaced synonym
Andreas Kohlbecker
05:57 PM feature request #7363 (Duplicate): TaxonNameEditor supports replaced synonyms
Andreas Kohlbecker
03:46 PM task #7364 (Resolved): TaxonNameEditor supports editing of a validated name
this is complete now an can be tested. Andreas Kohlbecker
03:30 PM task #7364: TaxonNameEditor supports editing of a validated name
Hallo Andreas,

anbei die fünf most-relevanten Codes (sind auch in EDIT):

Greuter, W.R., McNeill, J., Barrie, ...
Andreas Kohlbecker
03:36 PM Revision 5a92c416 (cdm-vaadin): ref #7364 filtering references by isbn to limit to nomenclatural codes only
Andreas Kohlbecker
03:25 PM Revision 814084d4 (cdmlib): ref #7466 adding marker type NOMENCLATURAL_RELEVANT
Andreas Kohlbecker
03:23 PM task #7466 (New): Use markers to identify references for ICBN or other codes
1. Use the MarkerType NOMENCLATURAL_RELEVANT which has been prepared already
2. **cdmlib**: extend the `IIdentifiabl...
Andreas Kohlbecker
02:38 PM Revision bdac7d2b (taxeditor): minor
Katja Luther
02:34 PM Revision 69e963b6 (taxeditor): navigator test has to be adapted because move taxon is now a longrunning task
Katja Luther
02:25 PM bug #7465 (New): adapt test to the change in move taxon operation
the test for moveTaxon in navigator needs to adapted to the fact that it is now a long running task and the result we... Katja Luther
02:23 PM Revision e396da95 (taxeditor): navigator test has to be adapted because move taxon is now a longrunning task
Katja Luther
01:52 PM Revision dc3d73f9 (taxeditor): adapt propertyPath for taxonrelations with names with typespecimen
Katja Luther
01:43 PM Revision 70234a4e (cdmlib): make moveTaxonnodes a longrunning task
Katja Luther
01:35 PM Revision e1cae301 (cdmlib): cleanup
Andreas Müller
01:26 PM Revision 521a868a (cdm-vaadin): consistent initialization of TextFieldNFix
Andreas Kohlbecker
01:21 PM Revision e293181b (cdmlib): ref #3560 add publish flag to lucene search
Andreas Müller
01:21 PM Revision b3973259 (cdmlib): cleanup
Andreas Müller
12:14 PM Revision 921ee57e (taxeditor): drag & drop also works as longRunningTask
Katja Luther
12:14 PM Revision ebfb13c6 (taxeditor): move taxon is a longRunning task now
Katja Luther
12:13 PM feature request #7464 (Closed): make move Taxonnodes a longrunning task
moving a taxonnode is espacially for a set of nodes an expensive operation and therefore it should be a long running ... Katja Luther
12:11 PM feature request #7463: Move taxonnodes should be available for multiple selection
at the moment moving taxon node is only available for a single node, we should provide it also for a set of nodes. Katja Luther
12:10 PM feature request #7463 (Closed): Move taxonnodes should be available for multiple selection
Open issues:
* ~~Don't move (grand)child nodes of selected parents to the top level.~~
* Exception in #7463#not...
Katja Luther
11:28 AM Revision 23328aba (cdmlib): cleanup
Andreas Müller
11:23 AM Revision 024216db (cdmlib): ref #3560 add publish flag to lucene index
Andreas Müller
09:50 AM Revision 8848da42 (cdmlib): cleanup
Andreas Müller
09:44 AM Revision d113f0b3 (taxeditor): ref #3560 add exception package to TaxEdtior
Andreas Müller
09:26 AM Revision ee391d38 (taxeditor): remove classificationService.getTaxonNodeByUuid in TaxEditor
Andreas Müller
09:25 AM Revision cf99ec53 (taxeditor): cleanup
Andreas Müller
12:39 AM Revision 517fca0d (taxeditor): remove classificationService.getTaxonNodeByUuid in TaxEditor
Andreas Müller
12:17 AM Revision cac97126 (cdmlib): ref #3560 implement loadTreeBranchToTaxon (pathTo) for unpublished
Andreas Müller
12:17 AM Revision f340f42e (cdmlib): cleanup
Andreas Müller

06/07/2018

09:56 PM Revision b3ec4c6e (taxeditor): fix test
Katja Luther
09:53 PM Revision 7e2ba2db (taxeditor): fix selection dialog after last changes
Katja Luther
09:38 PM Revision 0fde7fba (taxeditor): allow multiple selection for moving taxonnodes
Katja Luther
06:45 PM feature request #7461 (Feedback): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
Henning, can you please create journals with identical title and different issn and test if the sort oder is working? Andreas Kohlbecker
06:43 PM feature request #7461 (Resolved): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
Applied in changeset commit:cdm-vaadin|e32daf11e2a1d6947e525bb2e42e99f124e02b38. Andreas Kohlbecker
05:57 PM feature request #7461 (Closed): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
This has been intended as a quick solution to easily distinguish Journals with the same title (printed and digital is... Andreas Kohlbecker
06:43 PM Revision e32daf11 (cdm-vaadin): fix #7461 ordering references in comboboxes by titleCache, issn, isbn - consistence by CdmFilterablePagingProviderFactory
Andreas Kohlbecker
06:05 PM feature request #7462 (Rejected): references in type footnotes are clickable links

In the DataPortal the bibliographic citation of typedesignations is shown in a footnote to the typedesignation.
...
Andreas Kohlbecker
05:53 PM feature request #7460 (New): Duplicate button for TypeDesignations in SpecimenTypeDesignationWorkingsetEditor
A button for duplicating type designations is needed in the vaadin Registration-UI SpecimenTypeDesignationWorkingsetE... Andreas Kohlbecker
05:50 PM feature request #7459 (New): ToOneRelatedEntityCombobox for References allow searching also via ISSN and ISBN
Journals sometime are published as digital issue an later on as printed issue. Both have the same title but different... Andreas Kohlbecker
05:44 PM feature request #7458 (Closed): Note field for TaxonName , NameType and SpecimenType editors
Submitters need to add notes the names and type designations they are entering.
There should be one note field onl...
Andreas Kohlbecker
04:50 PM bug #7453 (Closed): Registration Workingsets inconsistent for registrations for sections of publications
Andreas Kohlbecker
02:48 PM bug #7453 (Resolved): Registration Workingsets inconsistent for registrations for sections of publications
Applied in changeset commit:cdm-vaadin|a433cf9e6bc18b10bf621cc69a42bf8517998311. Andreas Kohlbecker
04:16 PM Revision f64f6d1b (cdmlib): removing useless component scan for eu/etaxonomy/cdm/search
Andreas Kohlbecker
03:41 PM Revision ca5879a8 (cdm-vaadin): fixing edit event publishing related to validations
Andreas Kohlbecker
03:40 PM Revision b5c3ed67 (cdm-vaadin): simplifying TaxonNameEditorAction handling
Andreas Kohlbecker
03:39 PM Revision 0a94e611 (cdm-vaadin): fixing readOnly issue in TeamOrPersonField
Andreas Kohlbecker
03:06 PM Revision e5d7b47f (cdm-vaadin): adding COLLECTION.[CREATE,READ] to Group submitter
Andreas Kohlbecker
03:05 PM feature request #7457 (Closed): E+M: Allow filtering for only published in search
since #3560 it is now possible to search only for published taxa, synonyms, ...
We should allow this filter also i...
Andreas Müller
03:03 PM Revision 2d3df654 (taxeditor): ref #3560 search also for unpublished as default in TaxEditor
Andreas Müller
03:02 PM Revision 5235e093 (taxeditor): cleanup
Andreas Müller
03:01 PM Revision b8dc9fef (cdmlib): ref #3560 set includeUnpublished as default for FindTaxaAndNames configurator
Andreas Müller
02:48 PM Revision a433cf9e (cdm-vaadin): fix #7453 for sections resolve the inReference in the RegistrationWorkingSetService
Andreas Kohlbecker
02:39 PM bug #7456 (Duplicate): E+M: NameFacts von ILDIS Daten
Im Portal werden derzeit NameFacts noch direkt hinter z.B. einem Namen/MAN angezeigt. Das führt bei den NameFacts zu ... Andreas Müller
01:24 PM task #7455: [Check] Check all markers for correctnes
some interesting queries:
~~~ sql
SELECT m.markerType_id, dtb.titleCache, count(*) as n
FROM Marker m
INNER JO...
Andreas Müller
01:21 PM task #7455 (Resolved): [Check] Check all markers for correctnes
Check if all existing markers are still up-to-date with the current E+M import strategy.
~~~
SELECT flag, dtb.t...
Andreas Müller
10:52 AM bug #7454 (New): illegal argument exception for name selection in details view
mail of WB:
beim Eingeben einer langen Liste von Synonymen über die Namensauswahl im Detail-View (die Namen stehen...
Katja Luther
10:25 AM Revision 0f388254 (taxeditor): Updated version in pom / project files to taxeditor version : 5.0.1 and cdmlib version : 5.0.0
jenkins
10:20 AM Revision 1f866363 (taxeditor): fix problem for names with type designation in editor details view
Katja Luther
09:38 AM Revision e7dfec09 (taxeditor): adapt english command label for changing to pro parte synonyms
Katja Luther
07:54 AM Revision 160717a9 (taxeditor): ref #3560 fix test in TaxEditor for findMatchingXXX
Andreas Müller

06/06/2018

11:59 PM Revision 1301eb40 (cdmlib): ref #3560 implement publish in taxon service by name search
Andreas Müller
11:45 PM Revision 754a3c47 (cdmlib): ref #3560 implement publish in taxon service by name search
Andreas Müller
11:37 PM Revision 37f02c5d (cdmlib): cleanup
Andreas Müller
06:32 PM feature request #7010 (Resolved): Adapt handlers for multiple selection in e4 views
Adapted all handlers.
This is pretty cumbersome to review so feel free to test some context menus if you like and th...
Patrick Plitzner
05:52 PM bug #7453 (Closed): Registration Workingsets inconsistent for registrations for sections of publications
Opening the Registration Workingset for a Registration which is associated with the Section only shows the Registrati... Andreas Kohlbecker
04:53 PM Revision caf42d50 (cdm-vaadin): fixing inconsistent nomenclaturalTitleCacheField behavior
Andreas Kohlbecker
04:04 PM Revision 414d166a (cdm-vaadin): CustomComponentFields using NestedButtonStateUpdaters for consistent button states
Andreas Kohlbecker
03:03 PM Revision 4ffaaf10 (taxeditor): avoid NPE in getLastSelectedReferences
Katja Luther
03:00 PM bug #7452 (Resolved): TitleCache is not correctly set for new Person
Fixed with commit:taxeditor|4b61c8bccb8ea366c1f4f4a49d3e75dff4bd096e Patrick Plitzner
03:00 PM bug #7452 (Closed): TitleCache is not correctly set for new Person
Steps to reproduce
- Open the PersonSelectionDialog e.g. for name authors
- Click on "New Person"
- Enter text ...
Patrick Plitzner
02:56 PM Revision 55563baa (taxeditor): ref #7010 Enable multi selection in uses view
Patrick Plitzner
02:54 PM Revision 4b61c8bc (taxeditor): Fix protected title cache when creating a new Person
Patrick Plitzner
02:00 PM Revision f6d73035 (cdm-vaadin): supressing name creation events not coming from own view
Andreas Kohlbecker
01:37 PM Revision fbd0f4fc (cdm-vaadin): ignore readonly states of the datasource on setValue in TeamOrPersonField
Andreas Kohlbecker
01:37 PM Revision 8eb6c8dc (cdm-vaadin): fixing LazyInitializationException related to validations
Andreas Kohlbecker
12:55 PM Revision 09831abe (taxeditor): ref #7010 Adapt uses view handlers for multiple selection
Patrick Plitzner
12:49 PM Revision 017f41a2 (taxeditor): ref #7010 Adapt media view handlers for multiple selection
Patrick Plitzner
12:18 PM Revision e013914f (taxeditor): ref #7010 Fix enabling of move description handler
Patrick Plitzner
12:18 PM Revision 4c124358 (taxeditor): ref #7010 Enable multi-select in factual data view
Patrick Plitzner
11:51 AM Revision af10794f (cdm-vaadin): consistent popup opening, using boundTargetField to identify field to be updated
Andreas Kohlbecker
11:51 AM Revision 84746052 (cdm-vaadin): PopupViewRegistration to manage view popupview and target field - fixing problems
Andreas Kohlbecker
11:51 AM Revision b0a5a69c (taxeditor): ref #7010 Adapt descriptive view handlers for multiple selection
Patrick Plitzner

06/05/2018

11:37 PM Revision 547b40a1 (cdmlib): ref #3560 tests for unpublished listRankSpecificRootNodes
Andreas Müller
06:26 PM Revision 892f37a3 (cdmlib): ref #3560 implement unpublished in BaseController.doGet
Andreas Müller
06:26 PM Revision a2bf3e7c (cdmlib): cleanup
Andreas Müller
06:14 PM Revision aa42dfd9 (taxeditor): ref #7010 Adapt derivate view handlers for multiple selection
Patrick Plitzner
06:00 PM Revision e073fc85 (cdmlib): ref #3560 implement unpublished for listSiblings in service and remote (no tests yet)
Andreas Müller
05:54 PM bug #7451 (Resolved): ExternalLinks [ext-links]: update search urls
Applied in changeset commit:cdm-dataportal|522a5b8c5352339b2c9acf22392f6cb48773228d. Andreas Kohlbecker
05:19 PM bug #7451: ExternalLinks [ext-links]: update search urls
The "Search Fairchild Guide To Palms" no longer exists. Therefore I will remove this entry.
Andreas Kohlbecker
11:37 AM bug #7451 (Closed): ExternalLinks [ext-links]: update search urls
The search api of service providers used in the ext-links module have changes.
The module needs to be updated:
--...
Andreas Kohlbecker
05:54 PM Revision 522a5b8c (cdm-dataportal): fix #7451 fixing outdated search URIs, hiding fairchild, adding ggbn
Andreas Kohlbecker
05:39 PM Revision 62a08491 (cdmlib): ref #3560 implement unpublished for rankSpecificRootNode in service and remote (no tests yet)
Andreas Müller
05:37 PM Revision adc3d873 (cdmlib): cleanup
Andreas Müller
04:52 PM Revision 12b3d645 (cdmlib): ref #3560 implement unpublished for taxon collection retrieval in occurrence service
Andreas Müller
04:37 PM Revision 78e8f961 (cdmlib): ref #3560 unpublished for doGetTaxonNodes and doGetTaggedName and doGetSubtreeMedia
Andreas Müller
04:30 PM Revision bb8eecc0 (cdmlib): ref #3560 implement unpublished for load and find in service layer
Andreas Müller
04:19 PM Revision 611b3a85 (taxeditor): ref #6321 Re-enable search count warning for derivate view
Patrick Plitzner
04:10 PM Revision 3c1306f8 (cdmlib): ref #3560 use global "unpublished" constant
Andreas Müller
04:03 PM Revision cfb4f036 (cdmlib): cleanup
Andreas Müller
03:55 PM Revision afac11d7 (taxeditor): ref #7010 Adapt concept view handlers for multiple selection
Patrick Plitzner
03:44 PM Revision 203774bc (taxeditor): Disable editor view parts for multiple selections
Patrick Plitzner
03:18 PM Revision 38b32a1d (taxeditor): ref #7010 Adapt name editor handlers for multiple selection
Patrick Plitzner
03:05 PM Revision 4de13590 (taxeditor): ref #7010 Adapt poly key handlers for multiple selection
Patrick Plitzner
02:29 PM Revision 82e85f0d (taxeditor): ref #6321 Fix open authority handler + no multiple editor for same input
Patrick Plitzner
02:10 PM Revision 59277452 (taxeditor): ref #6321 Fix search service invocation for users and groups
Patrick Plitzner
12:33 PM Revision cad985fd (taxeditor): ref #7010 Adapt bulk editor handlers for multiple selection
Patrick Plitzner
11:12 AM Revision 79c8d3e5 (taxeditor): Replace "SNAPSHOT" with "qualifier" in taxeditor product
Patrick Plitzner
10:45 AM Revision 2b967181 (taxeditor): Fix canExecute() check for data source update handler
Patrick Plitzner
09:53 AM feature request #7450: Allow setPublish for subtree to include misapplied names and pro parte synonyms
AM:
bei der Suche müssen wir das evtl. noch im Detail definieren.
Mehrere Möglichkeiten gibt es :
1. Er kann...
Andreas Müller
09:28 AM feature request #7450: Allow setPublish for subtree to include misapplied names and pro parte synonyms
Maybe we should think about to have a publish flag on the taxonrelationship to avoid influencing another classification? Katja Luther

06/04/2018

08:49 PM feature request #6659: Show mediaCreated in dataportal
This is finally fixed! Andreas Müller, please confirm. Andreas Kohlbecker
08:47 PM feature request #6659 (Resolved): Show mediaCreated in dataportal
Applied in changeset commit:cdm-dataportal|fc95035952cdea4802094a45c56ba635a372718a. Andreas Kohlbecker
08:47 PM Revision fc950359 (cdm-dataportal): fix #6659 fixing bug, media created is now shown
Andreas Kohlbecker
06:54 PM bug #4307 (Feedback): User with permission group 'Editor' cannot create new authorteam via wizzard
The UI issue is solved, buttons to create a new Person or Team is available now. But creating a new TeamOrPersonBase ... Andreas Kohlbecker
06:08 PM Revision 80f1b620 (taxeditor): ref #6913 remove p2.inf files from build.properties
Patrick Plitzner
05:55 PM Revision dcf94302 (taxeditor): ref #6913 remove p2.inf files
Patrick Plitzner
04:14 PM Revision 185662d8 (taxeditor): Revert "ref #7268, #6913 Remove p2 related code"
This reverts commit 598845be674417e5a4d79cc533f3ff3b1a0b4cdb. Patrick Plitzner
03:35 PM Revision d0c17714 (cdmlib-apps): use E+M specific vocabulary for marker types
Andreas Müller
03:19 PM Revision 269e40a9 (taxeditor): ref #7362 Fix potential NPE
Patrick Plitzner
03:18 PM feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
In details view please switch syn. sec. and sec., first comes sec. then syn. sec., be careful to also set the two "d... Andreas Müller
03:15 PM feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
Andreas Müller wrote:
> In the second line in the name editor the syn. sec. is shown, not the sec., the later is mor...
Andreas Müller
02:01 PM feature request #7335 (Feedback): Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
In the second line in the name editor the syn. sec. is shown, not the sec., the later is more important and should de... Andreas Müller
03:16 PM Revision df9fa40d (taxeditor): ref #7362 Ask for detail loading when importing term
Patrick Plitzner
03:09 PM feature request #7450 (Closed): Allow setPublish for subtree to include misapplied names and pro parte synonyms
... and maybe also some other taxa related via taxon concept relations.
Needs some discussion how to handle MANs a...
Andreas Müller
02:56 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data portals
Other example uuids in Nepenthes: cdm_production_caryo_nepenthaceae
~~~ sql
SELECT acc.titleCache, acc.uuid, pp.t...
Andreas Müller
01:52 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data portals
IN the attachement you find how currently the default configuration in ...portal/admin/config/cdm_dataportal/settings... Andreas Müller
01:10 PM feature request #5627: Display pro parte (and partial) information in data portal
Not sure if this is really a full duplicate as #7417 is only about showing or not showing pp relationship records at ... Andreas Müller
11:17 AM feature request #5627 (Duplicate): Display pro parte (and partial) information in data portal
this issue duplicates an newer ticket with a more up to date description: #7417 Andreas Kohlbecker
12:15 PM task #2925 (Worksforme): [DISCUSS]Do we need newly created objects for EntityCollectionSection
The createNewElement() is needed to show the new (empty) element in the details view. Patrick Plitzner
12:13 PM bug #7340 (Closed): OderedVocabularies are initialised with DefinedTerms
I tried creating a new term for the above mentioned vocabularies and everything worked fine. Patrick Plitzner
12:04 PM Revision 098c2a31 (cdm-dataportal): Merge tag '5.0.1' into develop
tagging hotfix release 5.0.1 Andreas Kohlbecker
12:03 PM Revision 43d025f4 (cdm-dataportal): Merge branch 'hotfix/5.0.1'
Andreas Kohlbecker
12:02 PM Revision ac29da8f (cdm-dataportal): Do not show specimen table if no data available
Patrick Plitzner
11:04 AM Revision 533fd1e8 (taxeditor): ref #6321 i18n
Patrick Plitzner
10:45 AM Revision 8b4e88a6 (taxeditor): ref #6321 Avoid multiple parallel searches for same bulk editor
Patrick Plitzner
10:18 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
I am currently using a page size of 20 which leads to a quicker refresh of the bulk editor. But of course this will p... Patrick Plitzner
10:13 AM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects into the bulk editor
Applied in changeset commit:taxeditor|27a07b9c1e7cf113214a020191f0629e15b38cd3. Patrick Plitzner
10:13 AM Revision e4ebff17 (taxeditor): ref #7439 Remove jface viewer related code
Patrick Plitzner
10:13 AM Revision 27a07b9c (taxeditor): fix #6321 Implement parallel loading + progress bar for bulk editor
Patrick Plitzner

06/03/2018

10:42 PM bug #7447: ERS: Fix misapplied name issues for E+M common names.
es gibt einige wenige Common Names, die im Zusammenhang mit einem Misapplied Name genannt werden, bei dem aber der Be... Andreas Müller
10:33 PM bug #7447 (In Progress): ERS: Fix misapplied name issues for E+M common names.
Andreas Müller
07:04 PM bug #7447 (Resolved): ERS: Fix misapplied name issues for E+M common names.
Fix misapplied name issues for E+M common names.
There are 2 issues:
1. BerlinModelCommonNamesImport:341 - Mis...
Andreas Müller
10:06 PM Revision dfeeeb8b (cdmlib-apps): ref #7449 try to fix common name import for names with no region and ref #7447 add misapplied name common name import source
Andreas Müller
10:02 PM bug #7449 (Resolved): E+M: Import common names with no regionFk correctly
Currently it looks they are not imported at all as there is an iteration over the set of regions and for each region ... Andreas Müller
09:53 PM Revision 23b77c49 (cdmlib-apps): ref #7446 cleanup extension handling a bit
Andreas Müller
09:50 PM Revision cbfc2a5f (cdmlib): ref #7447 DescriptionElementBase.clone for inDescription
Andreas Müller
09:49 PM Revision 958bbf47 (cdmlib): cleanup
Andreas Müller
08:35 PM task #7448 (New): Replace auct. reference
Reference with refId = 5959 is an "auct." reference. It should be replaced where possible. Misapplied names automatic... Andreas Müller
05:06 PM Revision 7c3a4bab (cdmlib-apps): cleanup
Andreas Müller
05:05 PM Revision 62e9b5fa (cdmlib-apps): ref #7446 handle initials as initials in BM/EM import, not extension anymore
Andreas Müller
04:19 PM Revision acc45005 (cdmlib-apps): ref #7446 deduplicate common name language references in E+M
Andreas Müller
04:18 PM Revision 69584a18 (cdmlib-apps): ref #7341 validate common names with nameUseInSourceFk = -1
Andreas Müller
04:16 PM Revision b06d238e (cdmlib): ref #7446 add extension already exists check to IdentifiableEntity
Andreas Müller
03:41 PM task #7446 (New): Check if all extensions are needed
about 560.000 Extensions are currently imported.
We need to check if they are all needed or if some of them are d...
Andreas Müller
02:26 PM Revision 43e22332 (cdm-vaadin): ref #3560 add includeUnpublished for loadChildNodesOfTaxonNode in Vaadin
Andreas Müller
02:21 PM Revision acebcf17 (taxeditor): ref #3560 add includeUnpublished for loadChildNodesOfTaxonNode in TaxEditor
Andreas Müller
12:20 PM bug #7340 (Resolved): OderedVocabularies are initialised with DefinedTerms
By definition these terms and there vocabularies should not be ordered. The following attributes are all of type Defi... Andreas Müller
12:13 PM bug #7445 (Resolved): Empty term uri and isoXXX fields should be null
Applied in changeset commit:cdmlib|4dda23ea016633bd5b7282e9598aa3aa0eb47564. Andreas Müller
12:09 PM bug #7445 (Closed): Empty term uri and isoXXX fields should be null
Term URIs are currently loaded as empty strings, not as NULL by DefinedTermBase.readCsv. This should be changed. Also... Andreas Müller
12:13 PM Revision 4dda23ea (cdmlib): fix #7445 make empty term uris null
Andreas Müller
11:49 AM Revision 5c0f124f (cdmlib): ref #7340 make DeterminationModifier and Sex default vocabularies unordered
Andreas Müller
11:48 AM Revision 39577f4d (cdmlib): cleanup
Andreas Müller

06/02/2018

07:12 PM Revision 0fe80050 (cdmlib): cleanup
Andreas Müller
06:02 PM Revision 16fe90fd (cdmlib): ref #3560 implement publish filter for ClassificationDao.listChildrenOf and .countChildrenOf
Andreas Müller
06:00 PM Revision 4820d02b (cdmlib): cleanup
Andreas Müller
04:17 PM Revision 2edda1af (cdmlib): ref #3560 implement publish filter for TaxonNodeDao.listChildrenOf and .countChildrenOf
Andreas Müller
04:16 PM Revision 71fdb84d (cdmlib): cleanup
Andreas Müller
01:37 PM Revision cfb8e565 (cdmlib): minor
Andreas Müller
01:36 PM Revision 498fa1fa (cdmlib): ref #6945 use E+M vocabulary for marker types
Andreas Müller
01:14 PM task #3560 (In Progress): Withheld unpublished taxa from webservice used in E+M dataportal
Andreas Müller
01:12 PM feature request #6945 (Resolved): Allow flagging common names as recommended, synonym or unassessed
Andreas Müller
01:11 PM feature request #6945 (In Progress): Allow flagging common names as recommended, synonym or unassessed
Andreas Müller
01:08 PM Revision 48c5c17e (cdmlib-apps): ref #6945 use E+M vocabulary for marker types
Andreas Müller
12:50 PM task #7316 (Resolved): [E+M] Handle name relations correctly
Applied in changeset commit:cdmlib-apps|09539dc4fba8474bb74c0d0f67fac92412e708f9. Andreas Müller
12:49 PM Revision 09539dc4 (cdmlib-apps): fix #7316 final fix for name relations import
Andreas Müller
12:46 PM Revision b5f34512 (cdmlib-apps): change BM import order for better performance and single run for E+M
Andreas Müller
12:46 PM Revision 4643b84a (cdmlib-apps): fix occurrence source import
Andreas Müller
12:45 PM Revision b30b7482 (cdmlib-apps): ref #6945 implement common name status as markers for recommended and synonym
Andreas Müller

06/01/2018

11:17 AM Revision 11fdb92e (cdm-dataportal): Do not show specimen table if no data available
Patrick Plitzner
10:56 AM Revision 03fb8280 (taxeditor): ref #7362 Import term description
Patrick Plitzner
08:39 AM Revision 24fd1426 (taxeditor): ref #7362 Add vocabulary chooser when importing term into feature tree
Patrick Plitzner

05/31/2018

09:45 PM Revision 618a5b6f (cdmlib): ref #7334 fix missing table attributes in CDM light export for pro parte synonyms and misapplied names
Andreas Müller
06:19 PM Revision f389ce46 (taxeditor): Merge branch 'develop' into bulkNat
Patrick Plitzner
04:51 PM Revision 7fcb1960 (taxeditor): ref #7362 Add "Load Details" button
Patrick Plitzner
01:51 PM Revision b1d7bf10 (taxeditor): ref #7362 Refactor json parser + add term request
Patrick Plitzner
09:32 AM Revision bdebca02 (cdmlib): ref 3984: add persistence method to get uuidAndTitleCaches for a list of uuids
Katja Luther
09:32 AM Revision 4a1dd92c (cdmlib): ref 3984: add service method to get uuidAndTitleCaches for a list of uuids
Katja Luther

05/30/2018

09:43 PM Revision 0575453b (cdmlib-apps): improve BM orphaned taxon validation
Andreas Müller
09:37 PM Revision 6546eed2 (cdmlib-apps): ref #7238 correct case for givenname and familyname in BerlinModelAuthorImport
Andreas Müller
09:35 PM Revision fb6d7105 (cdmlib): minor
Andreas Müller
04:07 PM Revision b49b7f6b (taxeditor): ref #3984: first implementation for remembering the last selected references in selection dialog
Katja Luther
03:59 PM Revision b3b21160 (taxeditor): Fix potential NPE
Patrick Plitzner
03:57 PM feature request #7439: Use NatTable for BulkEditor
Katja Luther wrote:
> this works fine now
>
> maybe one minor issue: when set a multi selection as deduptlication...
Patrick Plitzner
03:42 PM feature request #7439 (Feedback): Use NatTable for BulkEditor
this works fine now
maybe one minor issue: when set a multi selection as deduplication candidate, the marker is no...
Katja Luther
03:15 PM feature request #7439 (Resolved): Use NatTable for BulkEditor
Patrick Plitzner
01:17 PM feature request #7439 (In Progress): Use NatTable for BulkEditor
Andreas Müller
12:43 PM feature request #7439: Use NatTable for BulkEditor
the selection as candidate or target is not possible, the menu items are not enabled.
and the details view does not ...
Katja Luther
03:14 PM Revision 0fb37c99 (taxeditor): ref #7439 Show context menu for empty editor when clicking on corner
Patrick Plitzner
03:10 PM Revision d9b8df42 (taxeditor): ref #7439 Add "Copy" to context menu
- show context menu for empty editor when clicking on header Patrick Plitzner
02:09 PM feature request #3984 (In Progress): Easier reference selection - recently used references
Katja Luther
01:41 PM Revision 0354dac6 (taxeditor): ref #7439 Adapt label when selecting merge target/candidates
Patrick Plitzner
10:58 AM Revision 72614023 (taxeditor): ref #7439 Fix visual update when converting team <> person
Patrick Plitzner
10:48 AM Revision eee3eb03 (taxeditor): ref #7010 Adapt bulk editor delete handler
Patrick Plitzner
10:38 AM Revision 97352439 (taxeditor): ref #7439 Move event list to editor input
Patrick Plitzner
10:29 AM bug #6220: Improve definition of orphaned taxon and synonym
Katja, can you please extract the open issues to a new ticket and close this one? Andreas Müller
10:28 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
is this still an open issue? Andreas Müller
10:27 AM feature request #5972: Prevent user from unwanted author and reference updates
I think this is fixed or mostly fixed. Can you please check and give me back for review if you think it is fixed? Andreas Müller
10:25 AM feature request #6050: provide the possibility to choose the fields of the simple details view for names
Can you have a look if these (functional and layout issues) can be easily fixed? If not please open a new ticket for ... Andreas Müller
10:23 AM bug #6105: Make CdmPreferences editable in separate view
Can we close this? Andreas Müller
10:04 AM task #6135 (Closed): Remove authors from Taxonomische Großgruppe
I expect this to be fixed. Reopen if not true after being tested by edapho crew. Andreas Müller
10:03 AM bug #6072 (Closed): Implement getTaxonomicGroups for Edaphobase
I expect this to be fixed. Reopen if not true after being tested by edapho crew. Andreas Müller
09:19 AM Revision 8309769f (taxeditor): ref #7439 Propagate row selection of nattable
Patrick Plitzner
07:48 AM feature request #6943 (Closed): Allow zoological in-Authors in taxon names
Andreas Müller
07:47 AM feature request #7443 (Closed): Implement in-authors in name parser and formatter for zoological and fungi names
For now we implement it only for fungi and zoological names. Need to check first if it exists for botanical names, too. Andreas Müller

05/29/2018

03:41 PM Revision bf128d5f (taxeditor): ref #7439 Add e4 context menu to nattable
- add full row selection Patrick Plitzner
02:39 PM Revision 94d71120 (taxeditor): ref #7439 Extract column property accessor to class
Patrick Plitzner
02:35 PM Revision 378fbb8a (taxeditor): ref #7439 Show titleCache and type in NatTable in bulk editors
Patrick Plitzner
12:34 PM Revision f6f03fa3 (taxeditor): ref #7439 Show titleCache in NatTable in bulk editors
Patrick Plitzner
10:40 AM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable via DB preferences
this should be fixed now. please review. Katja Luther
10:38 AM Revision 7dea17bf (taxeditor): correct classification selection in taxonnode selection dialog
Katja Luther
10:36 AM Revision 88d19c5d (taxeditor): fix NPE in TreeNodeDropAdapter
Katja Luther
10:25 AM Revision 8b8b9b2e (taxeditor): some changes for the admin preferences
Katja Luther
06:47 AM Revision d64d755b (taxeditor): ref #7010 Adapt edit polytomous key handler
Patrick Plitzner
06:47 AM Revision af3a8a41 (taxeditor): ref #7010 Adapt DDS navigator handler
Patrick Plitzner
06:43 AM Revision 39363db1 (taxeditor): Use NaTable in bulk editor (experimental)
Patrick Plitzner

05/28/2018

04:48 PM Revision a440015a (taxeditor): Updated copyright message in About dialog
Patrick Plitzner
12:15 PM feature request #3984: Easier reference selection - recently used references
Discussion: fast solution could be to always show the recent references in the selection dialog.
A more sophistic...
Andreas Müller
11:50 AM feature request #7440 (Closed): E+M mark common name reference with according marker
for further info see #7345 Andreas Müller
11:48 AM feature request #7345: [E+M] Common name references selectable in TaxEditor
Decision for migration: We implement the marker solution. Andreas Müller
11:44 AM bug #6973: Refreshing details and supplemental view
Andreas Müller wrote:
> Seems to be fixed (though I still don' understand why the details and supplemental data view...
Patrick Plitzner
11:40 AM feature request #7439 (Closed): Use NatTable for BulkEditor
Use NatTable composite for displaying the information in the bulk editor instead of the current SWT table viewer.
...
Patrick Plitzner
11:31 AM feature request #3989: [DISCUSS] Allow defining the vocabularies to be offered in the select dialogs
For E+M common name areas, distribution areas and distribution status is important. Andreas Müller
11:25 AM feature request #3989 (In Progress): [DISCUSS] Allow defining the vocabularies to be offered in the select dialogs
Andreas Müller
11:21 AM feature request #4101 (In Progress): Default value for publish bit of new taxa must be configurable via DB preferences
Andreas Müller
11:08 AM feature request #6659 (Feedback): Show mediaCreated in dataportal
It doesn't seem to work yet. Andreas Müller
10:04 AM Revision f7dd3e7a (taxeditor): Update Nebula Composite Table dependency
Patrick Plitzner
09:11 AM Revision a39f0411 (taxeditor): ref #7010 Remove unused "Remove SingleRead" handler
Patrick Plitzner
09:03 AM Revision f2199620 (taxeditor): ref #7010 Allow multiple selection for derivative delete handler
Patrick Plitzner

05/26/2018

07:06 PM bug #7079 (Feedback): P2 updates not found
It looks like nightly update does not work anymore in 5.1-Snapshot Andreas Müller
07:01 PM bug #6973 (Closed): Refreshing details and supplemental view
Seems to be fixed (though I still don' understand why the details and supplemental data view need to be white not gra... Andreas Müller
06:47 PM task #6158 (Closed): Update EDIT documentation from svn to git
Seems all to be fixed Andreas Müller

05/25/2018

12:44 PM bug #4307: User with permission group 'Editor' cannot create new authorteam via wizzard
is this still an open issue? Andreas Müller
12:18 PM bug #3788: sort order of search results broken in free-text taxon search
Please test if still an open issue Andreas Müller
12:02 PM feature request #7438 (Closed): implement citation suggestion in dataportal
Andreas Müller
11:27 AM task #7435: Handle also published in correctly
hier eine überarbeitete Version der Excel Datei mit einer 3. Tabelle, die einige Fälle enthält, bei denen im Detail N... Andreas Müller
11:03 AM task #7435: Handle also published in correctly
anbei eine Datei mit „also published in“ Informationen, die sich noch in Name Notes verstecken.
In der ersten Tabe...
Andreas Müller
10:25 AM task #7435: Handle also published in correctly
Hallo Eckhard,
in der angefügten Datei befinden sich alle Name Facts vom Type „also published in“. Sind nicht so v...
Andreas Müller
10:04 AM task #7435: Handle also published in correctly
Cleaned up Name.notes duplicates (1 exception send to ERS) Andreas Müller
11:06 AM feature request #7437 (New): Handle also published in data portal
implementation (and decision if necessary at all) depends on result of #7435 Andreas Müller
12:39 AM bug #6938 (In Progress): Tasks before a new Euro+Med import
Andreas Müller

05/24/2018

08:54 PM Revision 8e204953 (taxeditor): minor
Katja Luther
04:24 PM Revision c5ea433d (taxeditor): adapt test to not throw the exception put adding it to the result in pollProgressMonitor
Katja Luther
02:00 PM Revision 1df6e09d (taxeditor): add ecxeptions to update result instead of throwing them in pollingRemotingProgressMonitor
Katja Luther
12:35 PM task #7436 (New): Handling verbatimDate in E+M import
The verbatimDate is stored e.g. in RefDetails notes in different formats.
These need to be parsed (see also #7429)...
Andreas Müller
12:05 PM Revision 83458398 (cdmlib): minor
Katja Luther
11:52 AM Revision f3cce01e (cdmlib): adapt longrunningTasks service for all subtree operations
Katja Luther
11:27 AM Revision f51d204a (taxeditor): adapt deleteHandler in nameEditor to partial and pro parte misapplied names
Katja Luther
10:58 AM task #7435 (In Progress): Handle also published in correctly
Some names do have a second nomenclatural reference (or at least a second reference). This is usually handled as name... Andreas Müller

05/23/2018

03:08 PM task #7407 (In Progress): [E+M] Remove synonym autonyms
Andreas Müller
03:06 PM task #7407: [E+M] Remove synonym autonyms
AM: Im Anhang findest du die entsprechende Liste. Sie ist recht strikt, sollte also nur solche Fälle beinhalten, in d... Andreas Müller
02:35 PM task #7407: [E+M] Remove synonym autonyms
A strict SQL:
~~~ sql
SELECT n.FullNameCache, pt.StatusFk, pt.PTRefFk, pt.*, n.*
FROM PTaxon pt INNER JOIN Name ...
Andreas Müller
02:55 PM Revision ee6e93fe (cdmlib): ref #7434: remember sequence uris for downloading the files at the end of the import
Katja Luther
02:20 PM feature request #7434 (New): while importing sequences it should be possible to download fasta file
for the blast search we need fasta files of the sequences to create the BLAST DB. Therefore it should be possible to ... Katja Luther
02:15 PM feature request #7433 (New): new service method to get specimen by genetic AccessionNumber
Katja Luther
12:36 PM feature request #7433 (Resolved): new service method to get specimen by genetic AccessionNumber
Applied in changeset commit:cdmlib|f271620621cdd711088426b54e38849230129afc. Katja Luther
12:14 PM feature request #7433 (Resolved): new service method to get specimen by genetic AccessionNumber
to get the specimen for a given genetic accession number (as result of blast search) Katja Luther
12:33 PM Revision 16345de5 (cdmlib): adapt source reference in ABCD import
Katja Luther
12:21 PM Revision f2716206 (cdmlib): fix #7433: get specimen by genetic accession number
Katja Luther

05/22/2018

09:48 PM Revision a7523bcf (cdm-vaadin): manually adapt cdmlib version in vaadin
Andreas Müller
09:47 PM Revision fd122a90 (cdm-vaadin): cleanup
Andreas Müller
08:00 AM Revision 3b9e06cd (cdm-webapp): manually adapt cdmlib and vaadin version
Andreas Müller

05/18/2018

05:31 PM Revision 55788d53 (cdm-vaadin): fixed npe
Fabian Reimeier
03:14 PM feature request #6659 (Resolved): Show mediaCreated in dataportal
set to resolved to do review Andreas Müller
03:04 PM feature request #6574: Error Log view not available in Eclipse 4
Yes, I move this to the current milestone Patrick Plitzner
02:42 PM feature request #6574: Error Log view not available in Eclipse 4
After we have decided to not fully migrate to e4 can we use e3 Log view again? Andreas Müller
02:32 PM feature request #7432 (In Progress): Show default login only if the account has not been changed
Copied from #4256:
Some time ago we discussed this issue and decided that the login dialog should mention the defa...
Andreas Müller
02:28 PM bug #6241 (Feedback): fix java doc problems in projects
We should discuss if it is really necessary to fix the broken links. I also took a quick look and it seems that in mo... Patrick Plitzner
02:22 PM feature request #6932: Migrate bulk editor
Multi selection is generally handled in #7010.
Are there any other open issues?
When closing *this* ticket plea...
Andreas Müller
01:21 PM feature request #6932 (Feedback): Migrate bulk editor
I think we should first create a ticket with the remaining issues before closing. Otherwise the information will get ... Andreas Müller
02:19 PM feature request #6565 (Resolved): [MASTER] Eclipse 4 Migration
Andreas Müller
02:06 PM feature request #7431 (New): [MASTER] remaining E4 migration issues
Patrick Plitzner
01:53 PM feature request #7071 (Feedback): Reenable restore functionality
Can you leave a note why this is rejected and who decided? Are there technical problems related? Andreas Müller
01:45 PM feature request #6572 (Closed): Adapt/Add Wiki pages for e4 development
I adjusted the text about the rcp target platform.
General information about e4 development can be better found onli...
Patrick Plitzner
01:41 PM feature request #7015 (Feedback): Migrate recent menu item
Can you leave a note why this is rejected and who decided? Are there technical problems related? Andreas Müller
01:07 PM bug #7430 (Resolved): New team members should be added at the end of the member list
Applied in changeset commit:taxeditor|82a57421606db7ee734704b0b0d79b1de30daa2d. Patrick Plitzner
01:06 PM bug #7430 (Closed): New team members should be added at the end of the member list
Patrick Plitzner
01:07 PM Revision 82a57421 (taxeditor): fix #7430 New team members are added at the end of the member list
Patrick Plitzner
12:13 PM bug #6220: Improve definition of orphaned taxon and synonym
I don't understand why you moved this to the current milestone. The ticket is mostly fixed. The open issues are more ... Andreas Müller
12:01 PM bug #6220: Improve definition of orphaned taxon and synonym
moving to current milestone while closing #5616 Patrick Plitzner
12:02 PM feature request #5616 (Closed): Add the"Open in..." menu to taxon search
Patrick Plitzner
11:51 AM bug #3161 (Closed): Term Editors are no singletons
works fine Andreas Müller
11:45 AM feature request #4227 (Feedback): handle generated resources in eclipse workspace
@Andreas K.: Could you test again if it is possible to delete the `.classpath` file from taxeditor.cdmlib and run "Up... Patrick Plitzner
11:43 AM bug #7393 (Closed): Fix regressions resulting from cascade removal from relationships in TaxEditor
Seems to work for me. I tested in name editor and bulk editor with new and existing taxa/names and got no exceptions ... Andreas Müller
11:31 AM feature request #7421 (Closed): Implement verbatim date for references in TaxEditor
Seems to work as expected. Maybe in future we can also unify VerbatimTimePeriodElement and TimePeriodElement. But thi... Andreas Müller
10:57 AM feature request #7421: Implement verbatim date for references in TaxEditor
In 291c69d6 I merged DateDetailsSection and VerbatimDetailsSection and replaced distinction by boolean value "include... Andreas Müller
11:19 AM bug #4566 (Worksforme): check encoding for labels in DetailsView
looks fine on linux as well Patrick Plitzner
11:12 AM feature request #6752 (Closed): Add verbatimDate
Andreas Müller
10:55 AM Revision 291c69d6 (taxeditor): ref #7421 merged DateDetailSection and VerbatimDateDetailSection and moved verbatim field up
Andreas Müller
10:20 AM Revision c385a1b7 (cdmlib-apps): latest changes to BgbmInstancesUpdater, E+M Import, GermanSL Import, etct
Andreas Müller
10:08 AM feature request #7429 (Closed): Improve parsing and formatting for VerbatimTimePeriod
In #6752 only very basic parsing and formatting functionality has been implemented for verbatimDate. Parsing supports... Andreas Müller
10:03 AM Revision 9fb97d48 (taxeditor): Fix version number for develop build
Patrick Plitzner
09:52 AM feature request #7283: Improvements for alternative identifier search
As this is important for E+M I moved it to 5.1 Andreas Müller
09:48 AM bug #2450: DateTime field - Old values do not get deleted if you enter a new value to the parse field
We discussed and the wanted behavior is as it should be. Freetext field and parse field were mixed in the discussion. Andreas Müller
09:47 AM bug #2450 (Closed): DateTime field - Old values do not get deleted if you enter a new value to the parse field
Andreas Müller
09:38 AM feature request #6800: Allow all filters for DwCA export in TaxEditor
Katja Luther wrote:
> the subtree filter should be available now, please review. To filter on taxa, you have to clic...
Andreas Müller
09:36 AM feature request #7193: Implement area filter and rank filter in TaxEditor for exports
Sorry, I thought taxon node filter is also part of this ticket, but it isn't. Reverted last changes. Andreas Müller
07:39 AM bug #5279: Deleting taxon node is slow in some cases
we should have a look, if this is still an open issue. Katja Luther

05/17/2018

09:28 PM feature request #6394: Allow additional taxon relationships in TaxEditor to be handled similar to misapplications
It is already possible to create pro parte synonyms, implementation for related taxa might be very similar Andreas Müller
09:26 PM feature request #7421: Implement verbatim date for references in TaxEditor
we may want to move the field up, below end date Andreas Müller
10:21 AM feature request #7421 (Resolved): Implement verbatim date for references in TaxEditor
Andreas Müller
09:23 PM feature request #7422 (In Progress): Set nom. illeg as default in NomenclaturalStatusType ComboBox
KL: Mmh, doch es wird eigentlich nom illeg ausgewählt und es hat auch funktioniert, aber gerade eben habe ich es auch... Andreas Müller
09:16 PM feature request #7065 (Closed): When updating a subtree the affected and opened taxa are not updated in name editor this needs to be handled
Copied open issues to new ticket. Andreas Müller
03:57 PM feature request #7065: When updating a subtree the affected and opened taxa are not updated in name editor this needs to be handled
remaining issue needs to be handled in next release Katja Luther
09:15 PM feature request #7428 (Closed): Open issues for updating open data while subtree is updated
copied from #7065
* Open name editors are not checked for existing changes. When they are closed changes get lost....
Andreas Müller
05:43 PM feature request #5030 (Duplicate): Implement new dto object for TaxonNavigator
Andreas Müller
04:19 PM feature request #5030 (Closed): Implement new dto object for TaxonNavigator
Katja Luther
02:28 PM feature request #5030 (Resolved): Implement new dto object for TaxonNavigator
Andreas Müller
05:35 PM feature request #5687: search for alternative identifiers
Andreas Müller wrote:
> > In search result the alternative identifier and the titlecache of the reference should be ...
Andreas Müller
03:58 PM feature request #5687 (Closed): search for alternative identifiers
Katja Luther
04:34 PM feature request #7427 (Duplicate): Implement pro parte synonyms in TaxEditor
Katja Luther
04:32 PM feature request #7427 (Duplicate): Implement pro parte synonyms in TaxEditor
implement pro parte/partial synonyms in Editor. The details view should be similar to the misapplied name details view Katja Luther
04:29 PM feature request #7336 (Closed): Implement partial misapplied names in TaxEditor
Katja Luther
11:55 AM feature request #7336 (Feedback): Implement partial misapplied names in TaxEditor
This seems to be solved in 5.0 already. Can you please add changeset if possible and then close ticket. Andreas Müller
04:28 PM bug #2450: DateTime field - Old values do not get deleted if you enter a new value to the parse field
I think we should discuss whether this is not the wanted behaviour, because the atomised data are filled by the parse... Katja Luther
04:21 PM bug #7352: review propertyPaths in editor
for synonyms we did it, but we have to review all propertypaths whether they get all informations or maybe too much. Katja Luther
02:23 PM bug #7352 (In Progress): review propertyPaths in editor
I think we already started this Andreas Müller
04:19 PM feature request #2380 (Closed): TaxonNavigator should work with DTO objects instead of full blown cdm instances
Katja Luther
04:18 PM feature request #2380: TaxonNavigator should work with DTO objects instead of full blown cdm instances
creating a new ticket for the two remaining issues -> #7426 Katja Luther
04:18 PM bug #7426 (New): remaining issues of change of navigator to DTOs
* using the classification selector for "Change accepted to synonym", etc. in the dialog changing the classification ... Katja Luther
04:05 PM feature request #3746 (Closed): Implement time period scope for description elements in TaxEditor
only the space between the time period element and the element above is still open, so I close this ticket. Katja Luther
04:03 PM feature request #5616: Add the"Open in..." menu to taxon search
I think the open questions are already in ticket #6220, so we can close this ticket. Katja Luther
12:29 PM feature request #5616: Add the"Open in..." menu to taxon search
Can we move the open questions to a new ticket and close this ticket and move it back to the original milestone? Andreas Müller
03:56 PM bug #7227: New name bulk editor shows all menu entries
the last menu items come from a not emptied details view. we have to fix this. Katja Luther
03:46 PM Revision 337f099d (taxeditor): Merge branch 'release/5.0.0' into develop
jenkins
03:46 PM Revision 1439cd8a (taxeditor): Merge branch 'release/5.0.0'
jenkins
02:59 PM Revision bb9f9234 (taxeditor): Unify product files
Patrick Plitzner
02:17 PM feature request #7244 (Resolved): DistributionStatus editor help
Andreas Müller
01:52 PM Revision c7322319 (taxeditor): Fix version number in jre product configuration
Patrick Plitzner
01:37 PM Revision c226920a (cdm-vaadin): Documentation and refactoring
Fabian Reimeier
01:08 PM Revision 5efd99ce (taxeditor): Merge branch 'release/5.0.0' into develop
jenkins
01:08 PM Revision 2d56eb60 (taxeditor): Merge branch 'release/5.0.0'
jenkins
12:24 PM Revision 7218b4ea (taxeditor): Updated version in pom / project files to taxeditor version : 5.1.0 and cdmlib version : 5.1.0-SNAPSHOT
Patrick Plitzner
12:23 PM Revision 0fa485b5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.1.0 and cdmlib version : 5.1.0
Patrick Plitzner
12:11 PM Revision 013b0f6f (taxeditor): Updated version in pom / project files to taxeditor version : 5.0.0 and cdmlib version : 5.0.0
Patrick Plitzner
12:04 PM Revision 772183b0 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
12:04 PM Revision 92769b7a (cdm-server): updating poms for branch'release/5.0.0' with non-snapshot versions
jenkins
12:03 PM Revision 2ccfb816 (cdm-webapp): Merge branch 'release/5.0.0' into develop
jenkins
12:03 PM Revision ae1d98f0 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
12:02 PM Revision 061ee9b0 (cdm-webapp): updating poms for branch'release/5.0.0' with non-snapshot versions
jenkins
12:02 PM Revision c211d9a9 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.0.0
jenkins
11:51 AM feature request #7335 (Resolved): Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
Andreas Müller
11:49 AM Revision 0f31eab7 (taxeditor): ref #7362 Add term details to GfBio import composite
Patrick Plitzner
11:48 AM Revision 7056515a (cdm-vaadin): Merge branch 'release/5.0.0' into develop
jenkins
11:48 AM Revision ff972323 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
11:46 AM Revision e5718e83 (cdmlib-apps): ref #6720 adapt individualCount in cdmlib-app
Andreas Müller
11:45 AM Revision ae6dcc19 (cdmlib-apps): ref #7074 adapt Media.mediaCreated in cdmlib-app
Andreas Müller
11:45 AM Revision c1401ba2 (cdm-vaadin): updating poms for branch'release/5.0.0' with non-snapshot versions
jenkins
11:45 AM Revision 2f3bb9c7 (cdm-vaadin): jenkins bumping cdmlib.version to 5.0.0
jenkins
11:45 AM Revision 61aa989d (cdm-dataportal): Merge branch 'release/5.0.0' into develop
jenkins
11:45 AM Revision 1929182b (cdm-dataportal): updating poms for branch'release/5.0.0' with non-snapshot versions
jenkins
11:44 AM Revision c5f7c987 (cdm-dataportal): release-preparation: production level css
jenkins
11:43 AM Revision b0b44252 (cdmlib-apps): ref #6752 stricter use of verbatimDate in cdmlib-app
Andreas Müller
11:41 AM Revision 38017a1c (cdmlib): Updating develop poms back to pre merge state
jenkins
11:41 AM Revision d582a419 (cdmlib): Merge branch 'master' into develop
jenkins
11:41 AM Revision 7f27a769 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
11:41 AM Revision aa2c2e07 (cdmlib): Merge branch 'release/5.0.0'
jenkins
11:36 AM Revision 4e1b6f7d (cdmlib-apps): ref #7238 change to familyname and givenname incdmlib-app
Andreas Müller
11:23 AM Revision 9a3ee22d (cdmlib): updating poms for branch'release/5.0.0' with non-snapshot versions
jenkins
11:13 AM Revision 22c26b4c (cdmlib-apps): update poms in cdmlib-apps
Andreas Müller
11:09 AM Revision 020b4127 (cdm-webapp): manually bumping version to 5.0.0-SNAPSHOT
Andreas Kohlbecker
11:08 AM Revision 43fe58e0 (cdm-webapp): manually bumping version to 5.1.0-SNAPSHOT
Andreas Kohlbecker
11:05 AM Revision e36c111e (cdm-server): manually bumping version to 5.0.0-SNAPSHOT
Andreas Kohlbecker
11:05 AM Revision 5bc34ac7 (cdm-server): manually bumping version to 5.1.0-SNAPSHOT
Andreas Kohlbecker
11:03 AM Revision 9c4e71bd (cdm-dataportal): manually bumping version to 5.0.0-SNAPSHOT
Andreas Kohlbecker
11:02 AM Revision 7fa5d744 (cdm-dataportal): manually bumping version to 5.1.0-SNAPSHOT
Andreas Kohlbecker
10:53 AM Revision 947265bc (cdm-vaadin): manually bumping version to 5.0.0-SNAPSHOT
Andreas Kohlbecker
10:53 AM Revision 2d8dbc84 (cdmlib): change v in develop poms 4.16->5.1
Andreas Müller
10:49 AM Revision 1e44dfec (cdm-vaadin): manually bumping version to 5.1.0-SNAPSHOT
Andreas Kohlbecker
10:48 AM Revision 09a8e503 (cdmlib): change version from 4.15 => 5.0 in cdmlib release
Andreas Müller
10:35 AM Revision 89303661 (taxeditor): adapt deleteHandler in nameEditor to partial and pro parte misapplied names
Katja Luther
10:34 AM Revision 572814ac (taxeditor): cleanup
Andreas Müller
10:32 AM Revision 46d5e141 (cdmlib): ref #6752, ref #6627 fill verbatimDate in CDM light
Andreas Müller
10:28 AM Revision 5380fe2d (cdmlib): ref #6752 return type for setDatePublished(TimePeriod) and set to deprecated
Andreas Müller
10:19 AM Revision 79ce51e3 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.15.0-SNAPSHOT
jenkins
10:19 AM Revision b0e17e4f (cdm-webapp): updating poms for 4.16.0-SNAPSHOT development
jenkins
10:19 AM Revision 4fc91b42 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.16.0-SNAPSHOT
jenkins
10:19 AM Revision 07c232f0 (taxeditor): Updated version in pom / project files to taxeditor version : 4.16.0-SNAPSHOT and cdmlib version : 4.16.0-SNAPSHOT
jenkins
10:19 AM Revision 909ddfb3 (taxeditor): Updated version in pom / project files to taxeditor version : 4.15.0 and cdmlib version : 4.15.0
jenkins
10:18 AM Revision 15ddc30c (cdm-server): updating poms for 4.16.0-SNAPSHOT development
jenkins
10:17 AM Revision 1e2a55fb (cdm-dataportal): updating poms for 4.16.0-SNAPSHOT development
jenkins
10:17 AM Revision 1a8041cb (cdm-vaadin): jenkins bumping cdmlib.version to 4.15.0-SNAPSHOT
jenkins
10:17 AM Revision 4d753837 (cdm-vaadin): updating poms for 4.16.0-SNAPSHOT development
jenkins
10:17 AM Revision 3d38c7df (cdm-vaadin): jenkins bumping cdmlib.version to 4.16.0-SNAPSHOT
jenkins
10:14 AM Revision 2fd142a9 (cdmlib): updating poms for 4.16.0-SNAPSHOT development
jenkins
10:00 AM Revision 25d560ea (taxeditor): smaller changes for pro parte syn and MA in name editor
Katja Luther
09:43 AM task #7425 (Resolved): Implement VerbatimTimeField for cdm-vaadin and use this in the ReferencePopupEditor
Applied in changeset commit:cdm-vaadin|82522760c827a846568139a38523c2dc91d3f98a. Andreas Kohlbecker
09:43 AM Revision 82522760 (cdm-vaadin): fix #7425 VerbatimTimePeriodField implemented
Andreas Kohlbecker

05/16/2018

11:47 PM Revision a99f4712 (cdmlib): ref #6752 fix NPE in VerbatimTimePeriod parser
Andreas Müller
11:11 PM Revision ece7e0ae (cdmlib): ref #6752 stricter handling of Reference.setDatePublished (only for calling methods)
Andreas Müller
10:58 PM Revision a897c436 (cdmlib): cleanup
Andreas Müller
07:51 PM task #7425 (Closed): Implement VerbatimTimeField for cdm-vaadin and use this in the ReferencePopupEditor
create a common base class for VerbatimTimeField and TimePeriodField Andreas Kohlbecker
07:31 PM Revision 94e1dc4e (cdm-vaadin): ref #7238 fixing field binding in PersonField to adapt to model changes
Andreas Kohlbecker
07:24 PM Revision 2b6b2b23 (cdm-vaadin): introducing PopupViewRegistration to manage view popupview and target field
Andreas Kohlbecker
07:23 PM Revision 18fbda82 (cdm-vaadin): AbstractEditorAction now with source button and target field
Andreas Kohlbecker
07:23 PM Revision 904cd1c0 (cdm-vaadin): ref #7364 validation section implemented in TaxonNameEditor
Andreas Kohlbecker
04:02 PM Revision daaa3a02 (taxeditor): fix regression in setSubtree Operations
Katja Luther
03:17 PM bug #7379 (Closed): right click menu of accepted taxa should not show "change to"
Andreas Müller wrote:
> The menu entry seems to be correct now.
>
> However, it often happens that the menu entry...
Katja Luther
03:16 PM bug #7424 (Closed): right click menu does not show up in name editor
after some operations the right click menu of the accepted taxon does not show up anymore.
for example after delet...
Katja Luther
03:13 PM feature request #7411 (Closed): adapt mediaCreated in taxeditor to timePeriod
create a new ticket for refactoring the timePeriod element -> #7423 Katja Luther
12:06 PM feature request #7411 (Feedback): adapt mediaCreated in taxeditor to timePeriod
Works fine.
Online the time part is not yet shown. Feel free to create a new ticket for handling time.
Andreas Müller
10:44 AM feature request #7411 (Resolved): adapt mediaCreated in taxeditor to timePeriod
Katja Luther
03:13 PM feature request #7423 (New): refactore the time period element
the time period element needs to be refactored.
* the labels of the dates should be above the dates and only ones
...
Katja Luther
03:05 PM Revision e2ffb1fd (cdmlib): ref #6752 first implementation of VerbatimTimePeriod parser
Andreas Müller
02:56 PM Revision 92961300 (taxeditor): add changeTo operation for pro parte synonyms
Katja Luther
02:56 PM Revision d1c61e2b (taxeditor): adapt delete handler for all misapplied name types
Katja Luther
02:38 PM feature request #6672 (Closed): Migrate status line
The E4 migration has been done up to a sufficient state.
The migration of the status bar would only make sense if ...
Patrick Plitzner
02:35 PM feature request #6932 (Closed): Migrate bulk editor
The E4 migration has been done up to a sufficient state.
Remaining issues should be handled in separate tickets.
Patrick Plitzner
02:31 PM feature request #6595 (Closed): Migrate name editor
The E4 migration has been done up to a sufficient state.
Remaining issues should be handled in separate tickets.
Patrick Plitzner
02:29 PM Revision 5be4a641 (cdmlib): ref #6752 toString for VerbatimTimePeriod
Andreas Müller
02:29 PM Revision 9ec325d4 (cdmlib): ref #6752 strictly use VerbatimTimePeriod where possible
Andreas Müller
02:29 PM feature request #6902 (Closed): Migrate molecular module
The E4 migration has been done up to a sufficient state. Patrick Plitzner
02:28 PM Revision d3c30945 (taxeditor): ref #6902 Open AlignmentEditor in editor area
- fix dirty flag when closing editor Patrick Plitzner
02:28 PM Revision 326bdb02 (cdmlib): ref #7334 error handling in update script for pp synonyms
Andreas Müller
02:27 PM Revision 1941a843 (cdmlib): ref #6752 strictly use VerbatimTimePeriod where possible
Andreas Müller
02:27 PM Revision b436f19a (cdmlib): ref #7334, ref #6627 Adapted CDM light to support pp synonyms (cont.)
Andreas Müller
02:15 PM feature request #7007 (Rejected): Migrate IMemento functionality
The E4 migration has been done up to a sufficient state.
This feature was not migrated.
This may be re-visited in #...
Patrick Plitzner
02:14 PM feature request #7071 (Rejected): Reenable restore functionality
The E4 migration has been done up to a sufficient state.
This feature was not migrated.
This may be re-visited in #...
Patrick Plitzner
02:13 PM feature request #7267 (Rejected): Migrate about dialog
The E4 migration has been done up to a sufficient state.
This feature was not migrated.
Patrick Plitzner
02:13 PM feature request #7043 (Rejected): Migrate validation view
The E4 migration has been done up to a sufficient state.
This feature was not migrated.
Patrick Plitzner
02:12 PM feature request #7015 (Rejected): Migrate recent menu item
The E4 migration has been done up to a sufficient state.
This feature was not migrated.
Patrick Plitzner
02:12 PM feature request #6925 (Closed): Migrate general framework
The E4 migration has been done up to a sufficient state. Patrick Plitzner
02:10 PM feature request #6568 (Closed): Migrate perspectives
I close this ticket as this only occurs in rare cases and it is not critical if other perspectives are shown. The gen... Patrick Plitzner
12:18 PM feature request #6568: Migrate perspectives
Deleting .cdmLibrary solved the problem. Deleting workbench.xmi in installation folder did not. workbench.xmi in home... Andreas Müller
09:42 AM feature request #6568: Migrate perspectives
@AM: or could you do a search for `workbench.xmi` in your installation folder and in your home folder. It seems like ... Patrick Plitzner
08:05 AM feature request #6568: Migrate perspectives
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > For me the perspective selector do...
Patrick Plitzner
02:01 PM bug #3161 (Resolved): Term Editors are no singletons
Applied in changeset commit:taxeditor|2dc06490af06f288639d5c95c409782802edad25. Patrick Plitzner
02:01 PM Revision 2dc06490 (taxeditor): fix #3161 Term editors open as singletons
Patrick Plitzner
01:19 PM Revision cfd0130d (cdmlib): add also partial misappliedNames to computeMisapliedNameRelations
Katja Luther
01:06 PM Revision 458080b3 (taxeditor): set nom illeg. as default in nomenclatural status type combo box
Katja Luther
01:06 PM Revision 08ef23e2 (taxeditor): adapt non-editable part of proparte/partial synonyms in name editor and adapt icons
Katja Luther
12:36 PM feature request #7422 (Closed): Set nom. illeg as default in NomenclaturalStatusType ComboBox
for botanical names the default status type should be nom. illeg because it is the most used type. Katja Luther
12:31 PM feature request #6659 (In Progress): Show mediaCreated in dataportal
implemented but seems not to be working as expected. I have no time to do further testing. Andreas Kohlbecker
12:10 PM bug #6973 (Resolved): Refreshing details and supplemental view
Patrick Plitzner
12:10 PM Revision ad804b65 (taxeditor): ref #6973 Clear editor parts when reconnecting
Patrick Plitzner
12:07 PM Revision e3059327 (cdm-dataportal): ref #6659 showing mediaCreated by default
Andreas Kohlbecker
11:48 AM Revision 17993bbd (cdm-dataportal): ref #6659 showing mediaCreated by default
Andreas Kohlbecker
11:33 AM task #7325 (Closed): Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
looks ok now! Andreas Kohlbecker
11:28 AM Revision b343468a (cdm-vaadin): valid => val. in testdata
Andreas Müller
10:40 AM feature request #7118 (Closed): migrate selection dialogs
Katja Luther wrote:
> Pfeiltasten funktionieren noch nicht so wie beim alten Dialog, d.h. wenn ich Pfeil nach unten ...
Katja Luther
10:38 AM feature request #7119 (Closed): implement filter button for selection dialogs
Katja Luther
10:37 AM bug #7393: Fix regressions resulting from cascade removal from relationships in TaxEditor
please review, please also check in bulk editors Katja Luther
10:35 AM Revision 670cfe16 (taxeditor): fix saving problem for concepts in name editor
Katja Luther
10:12 AM Revision 36d5fbc6 (taxeditor): fix NLS missing message
Katja Luther
10:12 AM Revision a91ce8c5 (taxeditor): fix verbatim date in editor
Katja Luther
09:27 AM Revision bdc19ae2 (taxeditor): Remove dirty flag when closing specimen editor (tree)
Patrick Plitzner
08:03 AM Revision a82453b9 (taxeditor): ref #7362 i18n
Patrick Plitzner
07:58 AM Revision 73ad1ed3 (taxeditor): ref #7362 Improve GfBio UX
Patrick Plitzner
07:51 AM Revision 9ba1b637 (taxeditor): ref #7362 Remove invalid parameter from search request
Patrick Plitzner
07:31 AM Revision 9933241f (taxeditor): Remove usage of deprecated methods
Patrick Plitzner
07:15 AM Revision 971fcc6d (taxeditor): Add default text for combos to DDS editor
Patrick Plitzner
06:35 AM Revision 40268e87 (taxeditor): ref #7362 Fix merge compile error
Patrick Plitzner
06:08 AM Revision 85d5ad40 (cdmlib): javadoc
Patrick Plitzner
06:08 AM Revision e759655c (taxeditor): ref #7362 Internalize request constants
Patrick Plitzner
01:34 AM Revision 7f4db90c (taxeditor): ref #7421 continue refactor verbatim date sections and elements
Andreas Müller
01:34 AM Revision 19971743 (taxeditor): cleanup
Andreas Müller
01:04 AM Revision 943d4d5e (taxeditor): ref #7421 refactor verbatim date sections and elements
Andreas Müller
01:04 AM Revision 2dbf3806 (taxeditor): cleanup
Andreas Müller
12:59 AM feature request #7421 (Closed): Implement verbatim date for references in TaxEditor
Andreas Müller

05/15/2018

06:20 PM Revision 5aef4591 (cdmlib): ref #7334 update cached model for removed partial and pro parte
Andreas Müller
06:19 PM Revision 7901f247 (cdmlib): ref #7335, ref #7334 remove getProParteSynonyms method (is more or less duplicate)
Andreas Müller
05:58 PM Revision 3799b968 (taxeditor): ref #7362 Add ontology selection to GfBio import
Patrick Plitzner
05:35 PM Revision 9e1d6aa5 (taxeditor): ref #7335 exchange Taxon.getProParteSynonyms() by .getProParteAndPartialSynonyms()
Andreas Müller
05:30 PM Revision b3cdd8e7 (taxeditor): ref #7335 remove pro parte and partial checkboxes from TaxonBaseDetailElement
Andreas Müller
05:18 PM Revision 17c0f1e5 (cdmlib): ref #7334 remove proParte and partial from Synonym class
Andreas Müller
05:18 PM Revision ba5dcea5 (cdmlib): ref #7334 adapt DwCA and CDM light export to new pro parte synonym handling, also add misapplied name handling to CDM light
Andreas Müller
05:18 PM Revision 72c9224a (cdmlib): ref #7334 add convenience methods for pro parte and partial synonym to Taxon and TaxonRelationshipType
Andreas Müller
05:14 PM Revision bd864794 (cdmlib): add annoations to FullCoverageDataGenerator Registration
Andreas Müller
05:14 PM Revision afca67c8 (cdmlib): add partial misapplied name to test data
Andreas Müller
04:27 PM feature request #6913 (Closed): Remove e3 parts and dependencies
Closing this ticket now.
Most of the classes that are not used anymore are deleted. Some code cannot be deleted wi...
Patrick Plitzner
01:21 PM feature request #6913: Remove e3 parts and dependencies
I will have a quick look if I can remove some e3 code before the release. Most of it is done. Patrick Plitzner
12:25 PM feature request #6913 (In Progress): Remove e3 parts and dependencies
How far is this done? As far as I know you have worked on this during 5.0 a lot. Andreas Müller
04:25 PM Revision 586de129 (taxeditor): ref #6913 Remove e3 taxon navigator extensions (part 2)
Patrick Plitzner
04:25 PM Revision a1d4e9e9 (taxeditor): ref #6913 Remove e3 context menu items and name viewer extensions
Patrick Plitzner
04:25 PM Revision fadf903a (taxeditor): ref #6913 Remove e3 taxon navigator extensions
Patrick Plitzner
04:25 PM Revision 1c83c1e2 (taxeditor): ref #6913 Remove unused handler
Patrick Plitzner
04:25 PM Revision c6d85210 (taxeditor): ref #7362 Encode queries to URLs
Patrick Plitzner
04:25 PM Revision 1de8f66a (taxeditor): ref #6913 Remove e3 context menus
Patrick Plitzner
04:25 PM Revision c72cace9 (taxeditor): ref #6913 Remove test specimen import view
Patrick Plitzner
04:25 PM Revision 598845be (taxeditor): ref #7268, #6913 Remove p2 related code
Patrick Plitzner
04:09 PM task #7420 (Closed): Import for higher taxon graph for phycobank
The higher taxon graph as discussed in #6173 will be imported via spreadsheets whereas we will use the normal implici... Andreas Kohlbecker
03:57 PM feature request #7419 (Closed): Provide example NormalImplicit import file for phycobank higher taxon graph imports
The higher taxon graph as discussed in #6173 will be imported via spreadsheets whereas we will use the normal implici... Andreas Kohlbecker
03:03 PM Revision 14c03fc1 (taxeditor): minor for verbatimDate
Katja Luther
03:03 PM Revision 7cda107c (taxeditor): minor
Katja Luther
02:52 PM Revision 68d5a162 (taxeditor): further implementation for verbatimdate
Katja Luther
02:19 PM Revision ae4ea023 (taxeditor): add verbatim date to editor
Katja Luther
01:23 PM feature request #7268 (Closed): Re-implement own preference dialog
The preferences are completely migrated. Any remaining issues should be treated in other tickets. Patrick Plitzner
12:23 PM feature request #7268: Re-implement own preference dialog
How far is this implemented already? Should we assign it to the current milestone? Or the next? Percentage done? Andreas Müller
01:20 PM feature request #6672: Migrate status line
The migration has been done in the e4 branch but is still experimental. So in develop nothing has been done. Patrick Plitzner
12:27 PM feature request #6672 (In Progress): Migrate status line
How far is this done? Which target version? Andreas Müller
01:00 PM Revision 71e8cb9c (taxeditor): adding icon resources folder
Andreas Kohlbecker
12:50 PM Revision 92e8d1df (taxeditor): adapt details view to pro parte synonyms
Katja Luther
12:49 PM Revision ac0479b6 (taxeditor): minor
Katja Luther
12:39 PM Revision d8fdc499 (taxeditor): add pro parte synonyms to delete handler
Katja Luther
12:37 PM Revision 45fd1bf4 (taxeditor): fix create container for new pro parte synonym
Katja Luther
12:10 PM Revision 1e816532 (taxeditor): smaller changes in io wizards and navigator menu
Katja Luther
12:10 PM Revision c87fb375 (taxeditor): adapt editor to proParte synonyms
Katja Luther
12:06 PM feature request #6931 (Closed): Migrate uses view
This to me seems to be more or less a duplicate for #6769. Tested the usage perspective and couldn't find problems an... Andreas Müller
12:04 PM bug #6769 (Closed): Usages can not be created anymore in usage perspective
This seems to be fixed all. Andreas Müller
12:04 PM feature request #7102 (Closed): Enable EDIT and DELETE for specimen determinations
Patrick Plitzner
11:43 AM feature request #7102 (Feedback): Enable EDIT and DELETE for specimen determinations
One more related issue: when adding a taxon or name, the according text fields do not change their size but stay in s... Andreas Müller
11:39 AM feature request #7102: Enable EDIT and DELETE for specimen determinations
Patrick Plitzner wrote:
> Can you please check again if the issues last mentioned still exist. I fixed the unintende...
Andreas Müller
11:30 AM feature request #7102: Enable EDIT and DELETE for specimen determinations
Patrick Plitzner wrote:
> And what view is scrolled when saving?
The specimen tree editor view, see attachement.
...
Andreas Müller
12:03 PM bug #7418 (Closed): remaining specimen determination details view issues
copied from #7102:
One more related issue: when adding a taxon or name, the according text fields do not change th...
Patrick Plitzner
12:03 PM Revision 337e5814 (cdmlib): remove createSynonym method
Katja Luther
12:00 PM Revision b5dbd2f6 (cdmlib): add methods for Pro Parte synonyms
Katja Luther
11:52 AM feature request #6568: Migrate perspectives
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > For me the perspective selector does also show the "Team Synchr...
Andreas Müller
11:52 AM feature request #6568: Migrate perspectives
All the rest seems fine.
Except for the fact, that the view positions are not automatically stored anymore when cl...
Andreas Müller
11:51 AM feature request #6568: Migrate perspectives
Andreas Müller wrote:
> For me the perspective selector does also show the "Team Synchronizing" perspective (see att...
Patrick Plitzner
11:48 AM feature request #6568: Migrate perspectives
For me the perspective selector does also show the "Team Synchronizing" perspective (see attachment). It would be nic... Andreas Müller
11:19 AM bug #6973: Refreshing details and supplemental view
Andreas Müller wrote:
> >Now, after reconnect the details view and supplemental data is emptied but when clicking on...
Andreas Müller
11:09 AM bug #6973 (Feedback): Refreshing details and supplemental view
Andreas Müller wrote:
> >If one adds a new term and then the label of this term is changed, the new label is not ref...
Andreas Müller
10:43 AM bug #6526 (Closed): Show types in correct order
OK, the sorting of the designations worked before already. Misunderstanding from my side.
Also the dropdown has th...
Andreas Müller
10:35 AM feature request #7417 (Closed): Make pro parte and partial synonym relationships always visible in data portals
Pro parte and partial synonyms will only be handled by concept relations starting in v5.0.
Therefor the 2 concept re...
Andreas Müller
10:33 AM Revision 24c83069 (taxeditor): ref #7362 Implement term import from GfBio terminology service via DnD
Patrick Plitzner
10:29 AM Revision 69f6fe4f (cdmlib): ref #7362 Add service method which also saves the new feature
Patrick Plitzner
 

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