Activity
From 12/02/2020 to 12/31/2020
12/22/2020
- 09:09 PM bug #9365 (Closed): Reuse taxon does not work in new Taxon dialogue
- partly copied from #5114.
If reuse taxon is selected still a new taxon is created.
Also the secundum field shou... - 08:52 PM feature request #4896 (Closed): Bulkeditor: deduplication of objects of different type
- Generally this works. Open issue is handled in #9361
- 08:37 PM task #9364 (In Progress): Cleanup authors with multiple & and protected names and teams
- 07:29 PM task #9364: Cleanup authors with multiple & and protected names and teams
- Protected Teams(nomenclaturalTitle):
AlgaTerra: >14000
Cichorieae: 8487
Cuba: 14
Campanula: 1171
Caryo_amarant... - 03:56 PM task #9364: Cleanup authors with multiple & and protected names and teams
- Protected Names (still without fulltitlecache and authorshipcache):
Bromeliaceae: 584
Cichorieae: 476
Cuba: 567
... - 03:17 PM task #9364 (Closed): Cleanup authors with multiple & and protected names and teams
- (high priority only to first issue as it is related to #2200)
In context of #2200 I already checked names with >1 ... - 08:16 PM feature request #2200 (Closed): Handle multiple authors for names correctly when caching
- This can be closed as it works now as expected. Open data issues are handled in #9364
The only directly related is... - 10:51 AM Revision dc310f85 (cdmlib): ref #4770, ref #4908, ref #5163 remove commented line as it seems to work now
- 10:10 AM Revision f8fa7762 (cdmlib): ref #4770, ref #4908, ref #5163 try to remove explicit setting of protected nomecncl. title in convertPerson2Team
- 09:59 AM bug #5163 (Closed): Converting persons to team members may result in "-empty team-"
- The "empty team" issue has been solved. The handling of team members has been moved to follow up ticket #9363 as it i...
- 09:56 AM feature request #9363 (New): Allow to parse the new team when converting person to team
- copied from #5163
When converting a person to a team does not get team members by default. We could add a configur... - 09:48 AM Revision 6057b354 (cdmlib): ref #4770, ref #4908, ref #5163 some finetuning on convertPerson2Team
- 12:14 AM bug #2578 (Closed): Improve "move synonym"
- Now we always move the full homotypical group to the other taxon, so this is fixed.
The check that the synonym is ... - 12:07 AM Revision 304fcfc8 (cdmlib): ref #4770, ref #4908, ref #5163 assert that team has protected nomenclatural title after convertPerson2Team
12/21/2020
- 11:39 PM bug #9362 (New): Convert Team to Person and vice versa saves immediately
- When converting a team to a person or converting a person to a team the operation is immediately executed and not wai...
- 11:32 PM feature request #4908 (Closed): adding convert Team to Person and Person to Team to the bulk editor
- Open issues fixed or moved to new ticket.
- 11:32 PM Revision b07820f4 (taxeditor): ref #4908 adapt error message for MergeException
- 11:31 PM Revision 01f597fe (cdmlib): ref #4770, ref #4908 add test for person is null in person2Team converter
- 11:27 PM feature request #9361 (New): Give more specific information why person can not be converted to team
- copied from #4908 and #4896 (says that current implementation is only a workaround as a suitable return type for isMe...
- 11:09 PM Revision 58a9c0ab (cdmlib): ref #4770, ref #4908 handle person is null in person2Team converter
- 10:46 PM feature request #4770 (Closed): Allow convert person to team
- the open issue is fixed now. We can close the ticket
- 10:45 PM Revision d7943997 (cdmlib): ref #4770 handle unprotected titlecache for person2Team converter and some finetuning for empty persons
- 10:39 PM Revision a7cbfd9c (cdmlib): ref #4770 fix clone for AgentBase.contact
- 10:38 PM Revision f3a14906 (cdmlib): cleanup
- 03:15 PM Revision 2e9c058b (cdmlib): cleanup
- 03:14 PM Revision 2b772077 (cdmlib): ref #4770 fix handling nomenclatural title for convertPerson2Team
- 03:00 PM Revision 94722700 (cdmlib): improve generics for save() method
- 02:59 PM Revision c9b75310 (cdmlib): cleanup
- 01:44 PM Revision 180577bd (taxeditor): ref #4908 adapt German menu label
- 01:36 PM feature request #4769 (Closed): Allow convert team to person
- I used this intensively for deduplicating authors in cyprus DB and problems never occured. So I guess we can close th...
- 01:26 PM bug #9360 (Feedback): Parsed hybrids can not be persisted
- In Flora of Cyprus I tried to persist a hybrid formula (Aegilops biuncialis × geniculata) but got an NPE in TaxonName...
12/18/2020
- 11:38 PM feature request #7894 (Closed): [CHECK] Import sourceNumber as Identifier for references
- As ERS did not complain about missing numbers during the last 1.5 years I guess everything went well.
- 11:37 PM feature request #7800 (Closed): Parse preliminary RefDetails
- As the import did run and most of the above RefDetails were parsed I think we can close this ticket. However, there a...
- 11:18 PM feature request #9204 (Closed): Update cdmlib and taxeditor dependencies
- I close this ticket as related to v5.18 and open a new one for the remaining (and new) issues
- 11:17 PM task #9359 (Closed): Update cdmlib, taxeditor, cdmserver etc. dependencies
- A lot of version updates and updates to how dependencies are handled in TaxEditor has been done already in #9204.
... - 11:13 PM task #9208 (Closed): Move cdmlib-print and cdmib-remote to taxeditor.printpublisher
- I think we can close this ticket.
There is a very important follow up ticket #9351 (assigned to AK) that needs to ... - 11:04 PM bug #9354 (Feedback): Sorting in distribution editor is broken
- There are still open issues as the comparator does not follow the comparator contract and handling of names with rank...
- 10:55 PM feature request #6076: Specimen biocase search should work on observations
- What needs to be done to close this ticket?
Is it for review? If yes, how to review? Which search did not work? In T... - 10:44 PM feature request #7262 (Closed): add progress monitor to csv print export and cdm light export
- Looks like this is fixed (I did not check for CSV export as it is not so relevant anymore)
- 10:34 PM bug #7013 (Closed): NonUniqueObjectException for setSecundumReferenceForSubtree
- As far as I know and have tried this works now. Also the progress monitor seems to work again. Therefore I close the ...
- 10:33 PM Revision 2f7a80f7 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree - try to fix compile errors
- 10:26 PM Revision 863c4112 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree
- 10:25 PM Revision 14ac3831 (taxeditor): cleanup
- 10:06 PM bug #7098 (Closed): reuse name does not work
- The method has been fully refactored in the meanwhile so I guess the above question is not relevant anymore. Closing ...
- 09:57 PM Revision cd0bfb6e (cdmlib): try to fix failing test in suite (cont.)
- 09:32 PM Revision 5c696121 (cdmlib): ref #9349 add doRecursive to subtreeCloning
- 09:29 PM Revision 71f6ac57 (cdmlib): cleanup
- 09:29 PM Revision d1198615 (cdmlib): try to fix failing test in suite (cont.)
- 08:51 PM Revision 34140e24 (cdmlib): ref #9349 rename newClassificationName method (cont.)
- 08:48 PM Revision 1b873fea (cdmlib): try to fix failing test in suite
- 08:47 PM Revision 0120e292 (cdmlib): ref #9349 rename newClassificationName method
- 08:47 PM Revision 60617880 (cdmlib): cleanup
- 08:37 PM Revision 2da76eb1 (cdmlib): ref #9349 fix test for nomenclaturalStatus in name cloning
- 08:20 PM Revision e9612b75 (cdmlib): ref #9349 deprecate setReuseNames(false)
- 08:19 PM Revision c5bb8419 (cdmlib): ref #9349 move cloneSubtree to taxonNodeService
- 08:18 PM Revision 77c5bf22 (cdmlib): remove deprecated methods from classificationService
- 08:17 PM Revision 6077af92 (cdmlib): cleanup
- 07:41 PM feature request #4867 (Feedback): Add menu item for subtree cloning
- It seems that the menu entry was removed or does not work anymore, even with experimental features being switched on....
- 07:25 PM task #9228: Adaptations to allow editing Centaurea in Flora of Greece
- After running the import it became clear that not reusing names is not a good idea as
* handling name relationship... - 07:03 PM Revision dcd42a41 (cdmlib): ref #9349 improve name cloning (including documentation as name cloning is not straight forward)
- 05:52 PM bug #9358: OptionalDataException during HTTP invoker call
- If it is true that this problem occurs client side we should catch the exception in a way that it becomes clear that ...
- 04:28 PM bug #9358: OptionalDataException during HTTP invoker call
- Same issue but slightly different stacktrace
~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/rem... - 04:27 PM bug #9358: OptionalDataException during HTTP invoker call
- ERS: Das könnte sein. Ich habe auf meinem Rechner zuhause manchmal tatsächlich Kapazitätsprobleme - Ich werde das mal...
- 04:20 PM bug #9358: OptionalDataException during HTTP invoker call
- Lazy initializing distributions.
~~~
at org.hibernate.proxy.pojo.javassist.JavassistLazyInitializ... - 04:11 PM bug #9358: OptionalDataException during HTTP invoker call
- ~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/remoting/common.service
last remote request client... - 04:11 PM bug #9358 (New): OptionalDataException during HTTP invoker call
- Note: first issue to solve is catching the exception client side as explained in comment 6 => #9629
The bug in com... - 12:02 PM Revision 239cf764 (cdmlib): cleanup
- 12:01 PM Revision 1b50bc76 (cdmlib): move model comparators to own package
- 11:25 AM bug #9142: The Agent search dialog shows duplicated entries
- Andreas Müller wrote:
> Thats what I thought. It is actually not really a wrong implementation of the method but due... - 11:14 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
- Thats what I thought. It is actually not really a wrong implementation of the method but due to the above described s...
- 10:54 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
- First I thought it was because the search method was called twice but the real cause was the wrong implementation of ...
- 11:24 AM Revision 84e04ed3 (cdmlib): ref #9142: use clazz for FROM statement in getUuidAndAbbrevTitleCache for agents
- 11:11 AM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
- please review
- 10:59 AM bug #9264 (Resolved): Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
- Applied in changeset commit:taxeditor|d3334540d33466758ed37e2c7648f74f99420f43.
- 10:50 AM Revision f0cf9026 (cdmlib): ref #9142: fix getUuidAndAbbrevTitleCache for agents
- 10:18 AM Revision d3334540 (taxeditor): fix #9264: use eventbus for updating link with taxon
12/17/2020
- 08:11 PM Revision b7f8c9d4 (taxeditor): Merge branch 'hotfix/5.18.2'
- 07:53 PM Revision 34753cbb (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
- (cherry picked from commit e8d037bd184f407b89f09df7d93155119480d7b1)
- 07:52 PM Revision 840605a4 (taxeditor): fix NPE for cloned lectotype typedesignations
- (cherry picked from commit 11c7cb1711a7ed2dc828b81318fcaf34e34a3ef9)
- 07:14 PM Revision 45c8cb20 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.2 and cdmlib version : 5.18.0
- 04:08 PM Revision e8d037bd (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
- 03:50 PM Revision 5b06a013 (taxeditor): Merge branch 'hotfix/5.18.1'
- 03:40 PM Revision 7bc7988e (taxeditor): remove cdmlib-remote-webapp.war from git
- 11:49 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
- 11:39 AM bug #9142: The Agent search dialog shows duplicated entries
- can you shortly explain what the problem was and why the commit fixes it?
- 11:36 AM bug #9142: The Agent search dialog shows duplicated entries
- Applied in changeset commit:taxeditor|359b77dda6efc328563cfd93e63aee841662b4e7.
- 11:30 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
- This should be fixed. Please review.
- 11:35 AM Revision 359b77dd (taxeditor): fix #9142: fix doubled entries in agent selection dialog
- 10:35 AM Revision 59066f6b (taxeditor): adapt SpringSource GA Repository to https
- 10:34 AM feature request #9337: Open issues for reimplementation of termtree editors
- 16. Add "Open in Vocabulary" to term tree editor context menu; this is generally needed the primary usecase is to all...
- 09:16 AM feature request #9337 (In Progress): Open issues for reimplementation of termtree editors
- 10:10 AM feature request #8289 (Resolved): Add "Open in RefObj view" to term editor context menu
- please review.
- 10:09 AM Revision dc2e648b (taxeditor): ref #8289: add open in to term editor context menu
- 09:13 AM bug #9344: Datasets in Descriptive Dataset Navigator should be ordered
- please review
- 09:13 AM bug #9344 (Resolved): Datasets in Descriptive Dataset Navigator should be ordered
- Applied in changeset commit:taxeditor|b5f32b5d274ff26e8bf15ed9f42c61f028e79584.
- 09:13 AM Revision b5f32b5d (taxeditor): fix #9344: add comparator to descriptive dataset navigator
- 08:48 AM bug #9353 (Resolved): Copy & Paste creates dirty data in term trees
- Applied in changeset commit:taxeditor|27ca515332a1068e6f49ccff9a4466bce556a548.
- 08:48 AM Revision 27ca5153 (taxeditor): fix #9353: fix c&p in term trees
12/16/2020
- 04:29 PM Revision 9c9bb6b3 (taxeditor): remove doubled is
- 04:17 PM Revision 63fd9baa (taxeditor): rename labels for DDS navigator
- 04:13 PM Revision c34d4827 (taxeditor): open in of nomencl.source for the sourced name
- 03:16 PM Revision 25cc3cf4 (taxeditor): adapt DescriptionHelper for refObjects description of nomclat. sources
- 03:02 PM Revision b63ed015 (taxeditor): fix NPE for cloned lectotype typedesignations
- 03:01 PM Revision 11c7cb17 (taxeditor): fix NPE for cloned lectotype typedesignations
- 09:46 AM Revision 4e3c1b39 (taxeditor): remove error message for MAN without sec
- 09:44 AM Revision cca35f36 (taxeditor): do not expand the server side preferences
12/15/2020
- 12:43 PM Revision ea6ec182 (taxeditor): ref #9337: remove obsolete part descriptions
- 12:40 PM Revision f6ba2ccb (taxeditor): ref 9337: rename all termtree related classes
- 11:36 AM feature request #9338 (Resolved): Restructure term menus
- Both menues have the same structure and also the handling of opening the editors are synchronized.
- 11:33 AM Revision 22ac94a9 (taxeditor): ref #9338: restructure term menues and adapt handling
12/14/2020
- 10:44 AM Revision 38018d82 (cdmlib): fix import of dna data with different provider software version
12/11/2020
- 11:13 AM Revision 2cb343b3 (taxeditor): adapt path to cdmlib-remote-webapp.war from webapp to local
- 10:57 AM Revision 849c20bf (taxeditor): fix cdmlib-print and cdmlib-remote for hotfix 5.18.1
- 10:02 AM Revision 56cf64f7 (taxeditor): ref #9356: hotfix solution
- 09:48 AM Revision 40d48f6f (taxeditor): ref #9356: hotfix solution
- 08:20 AM bug #9357 (New): Advanced search shows selection for all classification even if only 1 classification is available for a dataportal
- In the flora of Greece dataportaal only the classification "Vascualar plants of Greece" should be shown
![](pictur...
12/10/2020
- 10:41 PM Revision 51b088c1 (cdmlib-apps): minor
- 10:41 PM Revision b8ddc6c3 (cdmlib-apps): update cdmlib-app to v5.19.0
- 03:29 PM bug #9356 (In Progress): Comparison method violates its general contract for SourceComparator and TypeDesignationComparator
- 02:02 PM bug #9356 (Closed): Comparison method violates its general contract for SourceComparator and TypeDesignationComparator
- There are two comparators violating the contract: SourceComparator in taxeditor and typeDesignationComparator in cdml...
- 01:26 PM bug #9350 (Resolved): Create new taxonnode ignores the publish flag
- yes, this is resolved and the workaround removed.
- 12:51 PM bug #9350 (In Progress): Create new taxonnode ignores the publish flag
- is this resolved and open for review (the develop version)?
- 01:21 PM Revision eb3f9882 (taxeditor): ref #9350: fix is implemented in cdmlib therefore we can remove the workaround in taxeditor
- 12:59 PM bug #9355 (New): Selection dialog for secundum reference does not work correctly
- mail NK:
ich kann keine neue sec. Referenz mehr auswählen, ohne vorher die bereits vorhandene zu löschen. Ich bin ... - 11:32 AM Revision a3d9156f (taxeditor): cleanup
- 11:28 AM Revision 9360e6f2 (taxeditor): cleanup
12/09/2020
- 04:06 PM bug #9354 (Resolved): Sorting in distribution editor is broken
- fixed for hotfix 5.18.1
- 04:05 PM bug #9354 (Closed): Sorting in distribution editor is broken
- The comparator for sorting the taxa in distribution editor does not work correctly.
- 04:04 PM bug #9353 (Closed): Copy & Paste creates dirty data in term trees
- It was missed to implement copy & paste for the dto implementation of the term tree editors, the menu items are still...
- 10:24 AM Revision 6b6ae919 (taxeditor): fix distribution editor comparator
- 10:02 AM Revision f34ce847 (taxeditor): fix distribution editor comparator
12/08/2020
- 01:51 PM bug #9352 (New): Missing order in quantitative data wizard
- mail AM:
bei Eingabe von QantData scheint mir die Reihenfolge der Felder etwas beliebig. Kann man das evtl. fest v... - 12:55 PM feature request #9002: Find suitable symbols for excluded, unplaced, placement doubtful
- WGB:
die Lösung für dieses Ticket hängt von der breiteren Diskussion dieser Kategorien und ihrer Verbindung mit de... - 12:52 PM bug #8971: Long running tasks in taxon navigator should disable the navigator
- WGB:
hier nur nochmal die Bestätigung, dass das ein an verschiedenen Stellen auftretendes Problem ist, besonders, ... - 10:56 AM Revision 3c793992 (taxeditor): ref #9199: fix missing handling of name in source in nomenclatural source
- 10:52 AM Revision af6adc60 (taxeditor): ref #9199: fix missing handling of name in source in nomenclatural source
- 08:37 AM bug #9351 (Closed): Include new locations for cdmlib-print and cdmlib-remote in jenkins release script
- cdmlib-print and cdmlib-remote are now only available in taxeditor.printpublisher.
Therefore the according links t...
12/07/2020
- 11:16 PM Revision 12490f6a (taxeditor): cleanup
- 11:16 PM Revision e62fc33a (taxeditor): remove cdmlib-remote from local (to test if it is needed at all there)
- 11:16 PM Revision b67648cb (taxeditor): upgrade cdmlib-print and cdmlib-remote to 5.19-Snapshot in printpublisher
- 11:16 PM Revision b4221bf3 (taxeditor): again add remote-webapp-war to gitignore
- 12:15 PM bug #9350: Create new taxonnode ignores the publish flag
- implemented a workaround for hotfix 5.18.1 in editor, this should be removed for the next release. The correct fix co...
- 12:12 PM bug #9350 (Closed): Create new taxonnode ignores the publish flag
- Creating a new taxon node and do not set the publish flag is not taken for the newly created taxon.
- 12:09 PM Revision d4de1459 (taxeditor): workaround for missing publish flag in newTaxonNode
- 12:06 PM Revision a3509fe0 (taxeditor): workaround for missing publish flag in newTaxonNode
- 11:55 AM Revision ac6fd8fc (cdmlib): fix missing publish flag in createTaxonnode
12/05/2020
- 01:43 PM bug #6488 (Closed): Always show some label text in the specimen editor even when no information is available
- This seems to be fixed as it did not appear anymore. Open new ticket if something similar happens again.
- 01:42 PM bug #4330: Correct handling of nomenclatural inreferences of Journals
- not yet fixed therefore I move it to current milestone
- 01:39 PM bug #1924: CIHORIEAE in-references in Footnotes
- This is still open therefore I move it to current milestone
- 01:38 PM bug #2969: Correct formatting for bibliographic references
- This is not yet fixed therefore I move it to current milestone.
- 01:27 PM feature request #7334 (Closed): Make pro parte and partial synonyms real concept relationships
- This is in use now for longer time and no errors were reported, so I guess we can close it.
- 01:22 PM feature request #5396: User interface to create a Remote Source
- moving all open remoting 6.0 tickets to Unassigned
- 01:21 PM feature request #5366: Implement less strict check for compatibility between taxeditor and target cdmserver
- moving all open remoting 6.0 tickets to Unassigned
- 01:20 PM feature request #5356: Handle exceptions which require reconnect
- moving this open remoting 6.0 ticket to current milestone to decide what to do with it.
Is the above mentioned sol... - 01:18 PM feature request #5020: [MASTER] Refactor / Redesign
- moving this open remoting 6.0 ticket to current milestone as we have to decide what to do with it (to me it is unclear)
- 01:16 PM feature request #4931: [Master] Fix Performance Issues
- moving this open remoting 6.0 tickets to Reviewed Next Major Release as subtickets are also there
- 01:11 PM feature request #4930: Implement Tests for Bulk Editor
- moving all open remoting 6.0 tickets to Unassigned
- 01:11 PM feature request #4929: Implement Tests for Polytomous Key Node Editor
- moving all open remoting 6.0 tickets to Unassigned
- 01:10 PM feature request #4074: [MASTER] Setup testing framework for remoting
- moving all open remoting 6.0 tickets to Unassigned
- 01:09 PM feature request #4021: H2 running in Server mode
- moving all open remoting 6.0 tickets to Unassigned
- 12:57 PM feature request #5794 (Resolved): Move other invalid names to the end
- Needs to be checked against new implementations within #9272 and #9282 , does comparator work accordingly. Also add d...
- 12:51 PM bug #9311 (Closed): Update some (abbrev) labels for nomenclatural status types
- 11:13 AM Revision d4511e7d (cdmlib): cleanup
- 11:13 AM Revision 1d8d7a2f (cdmlib): remmove potential NPE in TermNode.toString
- 10:55 AM Revision 5fc450f7 (cdmlib): cleanup
- 09:37 AM Revision e819af3f (cdmlib-apps): Update BgbmInstancesUpdater to new production instances
- 09:36 AM Revision a1205648 (cdmlib-apps): move country methods to term service in SynthesysCacheActivator
12/04/2020
- 05:59 PM Revision 2190c91b (taxeditor): fix wrong dependency to 5.18.0 snapshot version in printpublisher and local
- 04:47 PM bug #9347: LIE during ABCD file import
- This should be fixed soon.
- 03:32 PM bug #9347 (New): LIE during ABCD file import
- File imported: attachment:Kurs-19_20_Herbar.xml
~~~~
++++++++Import Report+++++++++
Specimens created: 0
Skippe... - 04:35 PM feature request #4866 (Closed): Implement clone method for complete classifications
- This is implemented so far (tested for Centaurea/FoG on command line) with some open issues.
- 04:33 PM bug #9349 (New): Open issues for classification cloning
- * "Import Result" including count cloned taxa, synonyms, names, ... (do we need to merge UpdateResult and ImportResul...
- 04:21 PM feature request #9320 (In Progress): Move additional publication information to nomenclatural source
- 04:11 PM task #9315 (In Progress): Remove old single source citation and microCitation columns
- 04:11 PM feature request #9327 (In Progress): Make taxon secundum reference an original source
- 04:10 PM bug #8141: explicitSource as additional attribute for TypeDesignationStatus
- not so high priority as long as TypeDesignationStatus vocabularies can not be edited
- 03:50 PM bug #9348 (New): Specimen online import dialog issues
- 1. The dialog has extrem width (at least in the KDE desktop environment) this seems to come from the widht of the com...
- 03:00 PM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
- I hope this is fast to fix, therefore I move it to 5.19
- 02:55 PM feature request #9192: Layout issues for source in taxonnode details
- If close, please move it back to 5.18
- 02:55 PM feature request #9192: Layout issues for source in taxonnode details
- This to me looks fine now. Maybe we could have a bit more space above "Related persons or teams if the "more" section...
- 02:48 PM bug #9073: Configuring the matrix view throws HTTP invoker exception
- When testing this I got another exception (NPE) during save:
~~~
last remote method : http://test.e-taxonomy.eu:8... - 02:45 PM bug #9245 (Feedback): Creating derived units from existing derived unit is not possible in specimen tree editor
- This to me seems to be fixed. Katja can you check, and if true add commit and correct target version?
- 02:23 PM bug #9346: Adding specimen to character matrix fails sometimes
- The Problem occurred with unit ID 433 in rem_conf_am (Dianthella test Node; Germany, Berlin (MC 67)).
- 01:32 PM bug #9346 (Closed): Adding specimen to character matrix fails sometimes
- There are two issues:
1. the SourceDTO is not serializable
2. LIE
~~~ text
ENTRY org.eclipse.e4.ui.workbench... - 02:10 PM bug #8660 (Duplicate): Generic menu creation for Term trees
- I think this is a duplicate for #9338 though the focus how to implement it has changed.
- 02:09 PM Revision b4323390 (taxeditor): Revert "Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0"
- This reverts commit bc421a42016f0e20f65ad9f2cc818899b53508e0.
- 02:09 PM feature request #9338: Restructure term menus
- This ticket seems to be somehow contradictory to #8660. However, currently I think a menu not automatically created i...
- 01:54 PM Revision b1eecb5d (taxeditor): add import
- 01:50 PM Revision 279a5b72 (taxeditor): missed to commit adapted manifest
- 01:34 PM Revision 5a1563c0 (taxeditor): avoid NPE when using new node as parent for d&d
- 12:58 PM bug #9345 (New): Prevent or warn about unparsable values when entering quantitative data
- Currently when entering e.g. "2,3" and pressing OK, the data is not stored but also no warning is given that it is p...
- 11:51 AM Revision aaea7d8a (taxeditor): Revert "avoid NPE when using new node as parent for d&d"
- This reverts commit 64dd32e955f33805399bc2b70b2f6bc14c12d4a0.
- 11:51 AM Revision 2c2faa69 (taxeditor): avoid NPE when using new node as parent for d&d
- 11:49 AM Revision 09e63d7a (taxeditor): fix problem with last selected references
- 11:48 AM bug #9344 (Closed): Datasets in Descriptive Dataset Navigator should be ordered
- ... alphabetically
Currently they seem to be unordered.
- 11:47 AM Revision bc421a42 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0
- 11:09 AM feature request #8554 (Feedback): Allow drag&drop from character into FeatureTrees
- this is probably a duplicate for #8774/#9337 (issues 4 and 5)?
- 10:58 AM Revision 64dd32e9 (taxeditor): avoid NPE when using new node as parent for d&d
- 10:03 AM bug #7990 (Closed): Moving a feature via d&d does not make the Feature Tree Editor dirty
- ups no, this issue is solved with the new implementation.
- 10:01 AM bug #7990 (Feedback): Moving a feature via d&d does not make the Feature Tree Editor dirty
- Is this still an open issue with the new term tree implementation? If not we should close it as works for me or as du...
- 09:34 AM Revision 028014b6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.1 and cdmlib version : 5.18.0
12/03/2020
- 09:34 PM Revision 113e67ef (taxeditor): Merge branch 'release/5.18.0' into develop
- 09:34 PM Revision 5155769b (taxeditor): Merge branch 'release/5.18.0'
- 08:54 PM Revision c654b140 (cdm-server): Merge branch 'release/5.18.0' into develop
- 08:54 PM Revision 51596a1b (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 08:53 PM Revision f0a436fd (cdm-server): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:52 PM Revision 345bcff8 (cdm-webapp): Merge branch 'release/5.18.0' into develop
- 08:52 PM Revision d9a3e77e (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 08:51 PM Revision a08a9f9c (cdm-webapp): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:51 PM Revision 8eb6f658 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.18.0
- 08:47 PM Revision c7e0b908 (cdm-dataportal): Merge branch 'release/5.18.0' into develop
- 08:47 PM Revision 6b7f29c7 (cdm-dataportal): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:47 PM Revision d2962586 (cdm-dataportal): release-preparation: production level css
- 08:47 PM Revision 9ed2ff7f (cdm-vaadin): Merge branch 'release/5.18.0' into develop
- 08:47 PM Revision 9251885f (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 08:43 PM Revision 90094ee9 (cdm-vaadin): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:43 PM Revision 99fbbfaf (cdm-vaadin): jenkins bumping cdmlib.version to 5.18.0
- 08:28 PM bug #8774 (Closed): Reimplement term tree editors to implement the general save strategy
- I think we can close this ticket. All remaining issues will go into the follow up ticket #9337
- 02:00 PM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
- I move the expand of the tree after saving to the follow up ticket.
- 12:35 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- The saving of the termtree editor before adding a new term is not necessary anymore, only moving a new term is not po...
- 11:26 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- D&D on itself makes a node disappear and saving it creates a stackOverflow
- 11:23 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- The tree should stay expanded when saving
- 08:26 PM feature request #8756 (Feedback): Refresh button for structure tree and property tree in Character Editor
- I tested again. It seems to work if the editing of the structure tree is done in the same TaxEditor instance or if th...
- 08:00 PM bug #9343 (Duplicate): Open issues for DTO based term tree & character editor
- upps, this is a duplicate of course for #9337. I moved all issues there
- 07:28 PM bug #9343 (Duplicate): Open issues for DTO based term tree & character editor
- copied from #8774
* tree collapses sometimes after save
* d&d from vocabulary editor to character editor not yet ... - 07:33 PM Revision af199beb (cdmlib): Updating develop poms back to pre merge state
- 07:33 PM Revision 638beb74 (cdmlib): Merge branch 'master' into develop
- 07:33 PM Revision 8c4580af (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 07:33 PM Revision 27b8c645 (cdmlib): Merge branch 'release/5.18.0'
- 07:11 PM Revision 5bdde967 (cdmlib): updating poms for branch'release/5.18.0' with non-snapshot versions
- 06:48 PM Revision f3722b4a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.18.0-SNAPSHOT
- 06:47 PM Revision 6d43461a (cdm-webapp): updating poms for 5.19.0-SNAPSHOT development
- 06:47 PM Revision 66dbc081 (cdm-webapp): updating poms for 5.18.0 branch with snapshot versions
- 06:47 PM Revision 0e2580eb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.19.0-SNAPSHOT
- 06:30 PM bug #9267 (Closed): No sec reference for move change Synonym to accepted Taxon
- First version was implemented now.
I think we can close this ticket. All the rest will be done in the follow up ti... - 03:32 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
- Now there is only a statement saying "The new taxon and the parent does not have the same secundum reference". But yo...
- 01:55 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
- A "hot fix" version is implemented now. The new accepted taxon keeps the secundum reference of the former synonym and...
- 06:24 PM Revision 0b1617f5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.19.0-SNAPSHOT and cdmlib version : 5.19.0-SNAPSHOT
- 06:24 PM Revision f28ad9fa (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.0 and cdmlib version : 5.18.0
- 06:23 PM Revision 6b274bd6 (cdm-server): updating poms for 5.19.0-SNAPSHOT development
- 06:23 PM Revision 599dde48 (cdm-vaadin): jenkins bumping cdmlib.version to 5.18.0-SNAPSHOT
- 06:23 PM Revision 7e0d9ffd (cdm-dataportal): updating poms for 5.19.0-SNAPSHOT development
- 06:23 PM Revision 1ae1237f (cdm-vaadin): updating poms for 5.19.0-SNAPSHOT development
- 06:23 PM Revision 2e76afe1 (cdm-vaadin): updating poms for 5.18.0 branch with snapshot versions
- 06:23 PM Revision c0d8b571 (cdm-vaadin): jenkins bumping cdmlib.version to 5.19.0-SNAPSHOT
- 06:20 PM Revision 3a956fb6 (cdmlib): updating poms for 5.19.0-SNAPSHOT development
- 06:20 PM Revision 2f1c9deb (cdmlib): updating poms for 5.18.0 branch with snapshot versions
- 06:14 PM feature request #8529: [DISCUSS]Display of aggregated descriptions
- Norbert, can you have a look on this ticket if you remember what was meant?
- 06:09 PM bug #8874: move taxon is reverted when taxon is edited afterwards
- Katja, do you remember why this ticket was assigned to me? Simply a mistake?
Can we reproduce this behavior? - 05:52 PM bug #8547 (Closed): Default type of a newly created inReference should depend on the type of the reference
- This is fixed as far as now by default the most likely reference type is now prefilled for inreferences.
There is ... - 02:28 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- ReferenceType.inReferenceContraints() is a list now, so the first element in the list is the default preferred type. ...
- 05:48 PM feature request #9342 (New): Only show specific reference types for inreferences
- copied from #8547
RefereceType.inReferenceContraints() returns the possible values available for an inreference. T... - 05:45 PM Revision 76ee473f (cdmlib): ref #8547 add inreference type for Proceedings
- 05:45 PM Revision 9f5a2d3a (cdmlib): throw exception when datasource could not be saved (instead of logging only)
- 05:44 PM Revision c58fbd18 (cdmlib): cleanup
- 05:39 PM bug #9199 (Closed): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Works as expected. We can close this ticket.
- 03:31 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > ~~Another minor issue: could we move... - 03:13 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- 03:09 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> Andreas Müller wrote:
> > ~~Another minor issue: could we move "Original Information" above... - 01:56 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- this should be solved with last commit.
- 05:25 PM Revision 8bdc7bb8 (taxeditor): ref #9267: warning message instead of confirm message box
- 05:21 PM task #9189 (Closed): Move datasource view to taxeditor.local
- This works now but there are still open issues to solve before all cdmlib-db stuff can fully migrate to taxeditor.loc...
- 05:20 PM feature request #9341 (New): Move local datasource access fully to taxeditor.local
- The datasource view has been migrated to taxeditor.local in #9189.
However, there is still a dependency to cdmlib-... - 05:19 PM Revision 49f27511 (taxeditor): ref #8774: only one message when trying to move new node
- 04:59 PM Revision 9f3ac470 (taxeditor): some doc
- 04:55 PM Revision 25082155 (taxeditor): ref 9189 add mchange-commons-java to MANIFEST
- 04:42 PM Revision d9f875da (taxeditor): minor
- 04:36 PM Revision 2fdfb0a3 (taxeditor): cleanup
- 04:36 PM Revision 88090686 (taxeditor): some gitignores
- 04:34 PM Revision 4228a4ef (taxeditor): ref 9189 add mchange-commons-java to dependency copy
- 03:36 PM feature request #9340 (Closed): Workflow support for secundum handling when making synonym a new accepted taxon
- copied from #9267
(1) check above ticket for remaining issues. Most important is to have a preference to handle th... - 03:26 PM Revision 5eabd2c1 (taxeditor): ref #9199: move original information behind name used in source
- 02:25 PM Revision 46418777 (cdm-vaadin): ref #8547 make ReferenceType.inReferenceContraints() a list (adapt vaadin)
- 02:23 PM Revision 2c0bb8e3 (cdmlib): ref #8547 make ReferenceType.inReferenceContraints() a list
- 01:55 PM task #6714: Create 001-cdm.h2.sql automatically
- This is more or less done in 5.18 except for the copying issue
- 01:35 PM Revision 91febabd (taxeditor): ref #8774: code cleaning
- 01:35 PM Revision e33f888a (taxeditor): ref #8774: label issues in character editor
- 01:09 PM Revision 427ed9f2 (taxeditor): ref #8774: label issues in character editor
- 12:26 PM Revision 81222649 (taxeditor): ref #8774: save is not necessary for creating new terms
- 12:01 PM Revision 4a70bee8 (cdm-dataportal): ref #8851 adapting test assertions to modified test data
- 10:53 AM Revision b15678f9 (taxeditor): ref #8774: change text for duplicates
- 10:40 AM Revision 4756075a (taxeditor): ref #8774: avoid d&d to child of the dropped node
12/02/2020
- 10:37 PM Revision 68aa76e0 (cdm-dataportal): ref #9322 changing test case for invalid designation to misapplied name
- 07:53 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- The above also happens when D&D a NamedAreae from NamedArea Term Editor to NamedArea Term Tree Editor, so it is proba...
- 07:51 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- D&D a NamedArea term from a NamedArea Tree Term Editor to an Rank Tree Term Editor leeds to the below NPE:
D&D wit... - 07:47 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- D&d a term onto its own child makes both disappear in the UI. Saving this is one way to create the above StackOverflo...
- 07:38 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- after moving some ranks around in the term editor I got the following when trying to save:
~~~
last remote method... - 01:11 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- The text for duplicate recognition should be improved from
This term tree does not allow duplicates and there exi... - 01:00 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- When changing a tree by e.g. changing a flag (order relevant) and then adding a term a message comes that the tree ne...
- 12:20 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- ... this happens whereever I try to move the 3rd rank from position of being child of 2nd rank (but in the same sessi...
- 12:17 PM bug #8774 (Feedback): Reimplement term tree editors to implement the general save strategy
- AOOB with a rank tree with 3 top level children, first I moved 3rd rank to be child of 2nd rank, than I tried to move...
- 11:47 AM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
- I think all remaining issues are solved or moved to new tickets.
- 07:00 PM bug #9322 (Closed): Remove invalid designation taxon relationship
- 06:50 PM feature request #9282 (Closed): Add nomenclatural standing
- 06:28 PM Revision 387aef2a (taxeditor): ref #9199: layout issues and code cleaning
- 06:22 PM Revision 0eb2578c (cdmlib): ref #6591 handle also AUD table in SingleTermRemover for removing original spelling
- 06:21 PM Revision dcf6678d (cdmlib): cleanup
- 06:20 PM Revision e2d8dde3 (cdmlib): ref #9322 handle also AUD table in SingleTermRemover and connect the schema updater
- 05:19 PM Revision 1fa1f3de (cdmlib): cleanup
- 05:13 PM bug #9257: revise filtering in OccurrenceServiceImpl.assembleFieldUnitDTO(FieldUnit fieldUnit) by SpecimenOrObservationType.PreservedSpecimen
- Katja Luther wrote:
> Andreas Kohlbecker wrote:
> > Hi Katja & AM, the current implementation partially filters for... - 04:45 PM Revision 1c2b2e59 (cdmlib): move country methods to term service and some cleanup
- 04:31 PM feature request #9190 (In Progress): Make taxeditor.local a loadable plugin not installed by default
- 04:30 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- ... looks like the error appears at different places depending on the type field that you enter data in
- 04:28 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Also the NPE still exists, but with a different row number:
~~~
last remote method : http://test.e-taxonomy.eu:80... - 04:25 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> ~~Another minor issue: could we move "Original Information" above ID Namespace and ID in Sou... - 04:23 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> Sometimes the nomenclatural source still shows "No external link" yet instead of no protolog... - 11:45 AM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- please review.
- 11:42 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> NPE when editing a lectotype source
>
> ~~~
> last remote method : http://test.e-taxonom... - 04:15 PM Revision 7b2afc79 (cdmlib-apps): uncomment schema location in app-import pom (not sure why it was commented)
- 04:14 PM Revision a1c98b63 (cdmlib-apps): ref #9228 add CentaureaCloneActivator
- 04:12 PM Revision 11e38aae (cdmlib): ref #9228 , ref #4866 some fixes for subtree cloning
- 04:12 PM Revision 5d03f828 (cdmlib): cleanup
- 03:03 PM Revision 3385926d (cdmlib): ref #9267: set sec of new taxon to sec of synonym
- 03:01 PM Revision bb2b5493 (taxeditor): ref #9267: add message if sec of new taxon differs from sec of new parent
- 02:46 PM Revision e796e4aa (taxeditor): ref #9189: move new menu item to the top
- 02:42 PM task #9189: Move datasource view to taxeditor.local
- Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > The "New"... - 02:27 PM Revision 3b11ede7 (taxeditor): avoid widget is disposed exception
- 02:06 PM Revision 21015b47 (taxeditor): ref #8774: fix AOOB Exception in termtree editor
- 02:05 PM bug #6356 (Closed): taxontree sort order as in editor
- Norbert wrote: "alles klar, gelöst!"
- 01:54 PM feature request #8308 (Worksforme): Extend specimen type designation editor
- 01:45 PM feature request #8308: Extend specimen type designation editor
- This ticket can be set to "worksforme".
The image issue raised is not what the screenshot here shows. I will comment... - 01:27 PM bug #9313 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor
- 01:04 PM bug #9313: LazyInitializationException (LIE) in TaxonNamePopupEditor
- no problems with existing names (orthogr. variant, corrected name, species name, genus name) anymore. Ticket can be c...
- 12:54 PM Revision 0b429510 (cdm-dataportal): ref #9322 removing taxon relationship invalid designation from portal code
- 12:30 PM bug #8776 (In Progress): Open issues for TermCollection.allowDuplicates handling in TaxEditor
- 12:28 PM Revision ca0e1f12 (taxeditor): ref #4866, ref #9228 fix postgresql version number and add to gitignore
- 12:07 PM Revision 9306fdac (taxeditor): ref #4866, ref #9228 preliminary revert moving h2, postgresql and mysql from cdmlib to local and include mchange-commons-java in cdmlib
- 11:42 AM Revision d34bc6be (taxeditor): fix NPE in nameEditor
- 11:35 AM Revision bd5b538f (taxeditor): ref #9199: fix NPE for newly created designation source
- 11:35 AM Revision 0a20a617 (taxeditor): ref #9332: further clean up in editor
- 09:07 AM feature request #9339: Improve warning message if save is necessary
- We should do this soon
- 08:22 AM feature request #9339 (New): Improve warning message if save is necessary
- The actual warning message "The editor needs to be saved..." is misleading because normally only the active window is...
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