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feature request #7334

Make pro parte and partial synonyms real concept relationships

Added by Andreas Müller almost 3 years ago. Updated 3 months ago.

Status:
Closed
Priority:
Highest
Assignee:
Andreas Müller
Category:
cdm
Target version:
CDM UML 5.0
Start date:
03/28/2018
Due date:
% Done:

100%

Estimated time:
1.00 h
Severity:
major
Tags:
euro+med

Description

Since #5974 pro parte and partial is stored as attribute of a synonym which belongs to exactly 1 accepted taxon.

Pro parte and partial synonyms may link to multiple taxa and they are not real synonyms in terms of that they are equal to the accepted taxon in semantics. Indeed, they are concept relationships and therefore should be handled as such.

We need 2 new taxon relationship types for them. Also we need to migrate existing data by making the synonyms accepted taxa and create the according taxon relationship.

Related issues

Related to Edit - feature request #5974: Remove synonym relationships Closed 11/14/2016
Related to Edit - feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor Closed 03/28/2018
Related to Edit - task #7319: [CHECK] Import synonyms correctly in E+M Resolved 03/19/2018
Related to Edit - feature request #7417: Make pro parte and partial synonym relationships always visible in data portals Closed 05/15/2018
Related to Edit - bug #6627: Remaining cdm light issues Resolved 05/08/2017
Related to Edit - feature request #7157: interim solution to mark pro parte synonyms in the dataportal Rejected 01/08/2018
Precedes Edit - bug #7478: Fix pro parte synonym search Resolved 06/15/2018

Associated revisions

Revision 84046c2e (diff)
Added by Andreas Müller almost 3 years ago

ref #7336, ref #7334 add pro parte synonym, partial synonym and partial misapplied name as taxon relationship types

Revision 4010183a (diff)
Added by Andreas Müller almost 3 years ago

fix #7334 update script for pro parte synonyms to concept relationships

Revision 72c9224a (diff)
Added by Andreas Müller almost 3 years ago

ref #7334 add convenience methods for pro parte and partial synonym to Taxon and TaxonRelationshipType

Revision ba5dcea5 (diff)
Added by Andreas Müller almost 3 years ago

ref #7334 adapt DwCA and CDM light export to new pro parte synonym handling, also add misapplied name handling to CDM light

Revision 17c0f1e5 (diff)
Added by Andreas Müller almost 3 years ago

ref #7334 remove proParte and partial from Synonym class

Revision 7901f247 (diff)
Added by Andreas Müller almost 3 years ago

ref #7335, ref #7334 remove getProParteSynonyms method (is more or less duplicate)

Revision 5aef4591 (diff)
Added by Andreas Müller almost 3 years ago

ref #7334 update cached model for removed partial and pro parte

Revision b436f19a (diff)
Added by Andreas Müller almost 3 years ago

ref #7334, ref #6627 Adapted CDM light to support pp synonyms (cont.)

Revision 326bdb02 (diff)
Added by Andreas Müller almost 3 years ago

ref #7334 error handling in update script for pp synonyms

Revision 618a5b6f (diff)
Added by Andreas Müller almost 3 years ago

ref #7334 fix missing table attributes in CDM light export for pro parte synonyms and misapplied names

Revision 8d8d7646 (diff)
Added by Andreas Müller over 2 years ago

ref #7334 add pro parte and partial synonym to test terms

Revision 7b9ed797 (diff)
Added by Andreas Müller over 1 year ago

ref #7334 remove TaxonBase.proParte and partial and ref #8398 add codeEditon to nomStatus and nameRelations

Revision 43613a08 (diff)
Added by Andreas Müller over 1 year ago

ref #7334 adapt TaxEditor tests to new schema (delete partial and proparte)

History

#1 Updated by Andreas Müller almost 3 years ago

#2 Updated by Andreas Müller almost 3 years ago

  • Tags set to euro+med

#3 Updated by Andreas Müller almost 3 years ago

  • Related to feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor added

#4 Updated by Andreas Müller almost 3 years ago

  • Status changed from New to In Progress
  • Priority changed from New to Highest

#5 Updated by Andreas Müller almost 3 years ago

  • % Done changed from 0 to 10

#6 Updated by Andreas Müller almost 3 years ago

  • Related to task #7319: [CHECK] Import synonyms correctly in E+M added

#7 Updated by Andreas Müller almost 3 years ago

  • Priority changed from Highest to Priority14

#8 Updated by Andreas Müller almost 3 years ago

  • Estimated time set to 3.00 h

#9 Updated by Andreas Müller almost 3 years ago

  • Priority changed from Priority14 to Highest

#10 Updated by Andreas Müller almost 3 years ago

  • Status changed from In Progress to Resolved
  • % Done changed from 10 to 50

#11 Updated by Andreas Müller almost 3 years ago

  • Related to feature request #7417: Make pro parte and partial synonym relationships always visible in data portals added

#12 Updated by Andreas Müller almost 3 years ago

  • Related to bug #6627: Remaining cdm light issues added

#13 Updated by Andreas Müller almost 3 years ago

  • % Done changed from 50 to 70
  • Estimated time changed from 3.00 h to 1.00 h

#14 Updated by Andreas Müller over 2 years ago

  • Precedes bug #7478: Fix pro parte synonym search added

#15 Updated by Andreas Müller over 2 years ago

#16 Updated by Andreas Müller 3 months ago

  • Status changed from Resolved to Closed
  • % Done changed from 70 to 100

This is in use now for longer time and no errors were reported, so I guess we can close it.

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