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From 12/15/2020 to 01/13/2021

01/13/2021

06:29 PM bug #9386: orthographic variants should not be symmetrical
It is correct that there is only one correct spelling. In PhycoBank, we need to register the published name "as is" =... Wolf-Henning Kusber
06:12 PM bug #9386 (New): orthographic variants should not be symmetrical
According to the nomenclatural code there is always only 1 valid orthographic variant so the name relationship should... Andreas Müller
05:29 PM task #8455: Show specimen preferredStableURL as external link icon?
Screenshot for long URI in typification:
![](picture429-1.png)
Andreas Müller
05:16 PM task #8455: Show specimen preferredStableURL as external link icon?
Detail screenshot from the Derivate tree view (the derivate path view looks quite the same):
![](picture859-1.pn...
Andreas Kohlbecker
04:26 PM task #8455: Show specimen preferredStableURL as external link icon?
example for ugly linking: http://ws2.cybertaxonomy.org/dataportal/greece_bupleurum_01_with_onthology/?q=cdm_dataporta... Andreas Müller
05:26 PM bug #9384 (Closed): DefaultReferenceCacheStrategy.createShortCitation() working not correctly for...
as we talk about bibliographic references here the ICN (or any other code) is not relevant here. It is the rule I hav... Andreas Müller
04:44 PM bug #9384: DefaultReferenceCacheStrategy.createShortCitation() working not correctly for Teams wi...
The implementation is correct as far as the the implemented formatting rule for more than two authors is holding true... Andreas Kohlbecker
04:18 PM bug #9384: DefaultReferenceCacheStrategy.createShortCitation() working not correctly for Teams wi...
The fix was not fully correct as it created teams like Name1, Name2 & al. but there should be always a maximum number... Andreas Müller
04:20 PM Revision 22b89169 (cdmlib): add javadoc comment
Andreas Müller
04:14 PM Revision 619db306 (cdmlib): fix #9384, ref #9279 fixed incorrect implementation of createShortCit...
Andreas Müller
04:12 PM Revision 8b822608 (cdmlib): cleanup
Andreas Müller
02:51 PM Revision 02879fb5 (taxeditor): fix state vocabulary menu parameter
Katja Luther
02:47 PM bug #7711 (In Progress): Bugs in media gallery
Katja Luther
12:08 PM bug #9369 (Resolved): Reference Detail is missing in MediaSpecimen details view
please review Katja Luther
12:07 PM Revision 66e893c0 (taxeditor): published in details more detailed label
Katja Luther
12:07 PM bug #9372 (Resolved): in media details view unprotected title cache is not updated when underlyin...
this ios fixed, please review Katja Luther
12:06 PM Revision 527b4867 (taxeditor): fix update of media details header and add published in details
Katja Luther
11:41 AM bug #9371: Media bulk does not persist data anymore
please review Katja Luther
11:36 AM bug #9371 (Resolved): Media bulk does not persist data anymore
Applied in changeset commit:taxeditor|0ef0103a664888c0e398b9ab5f83b0c170c5a599. Katja Luther
11:36 AM Revision 0ef0103a (taxeditor): fix #9371: fix save in media bulk editor
Katja Luther
09:58 AM task #9385 (New): Simplyfy boundingbox setting for user fixed map clipping
Problem:
The settings in `admin/config/cdm_dataportal/settings/geo` for the **Bounding box** needs to be complian...
Andreas Kohlbecker

01/12/2021

04:57 PM Revision 2a28e5d2 (cdmlib): TypedEntityReference: factory method with option to supress the label...
Andreas Kohlbecker
04:50 PM Revision bf3b398f (cdmlib): fixing inappropriate use of TypedEntityReference for creating tagged ...
Andreas Kohlbecker
04:33 PM bug #9384: DefaultReferenceCacheStrategy.createShortCitation() working not correctly for Teams wi...
please review
Tests for this method are missing and should be implemented asap. Please could you open a new ticke...
Andreas Kohlbecker
04:32 PM bug #9384 (Resolved): DefaultReferenceCacheStrategy.createShortCitation() working not correctly f...
Applied in changeset commit:cdmlib|854244ff90c5ff67a0b30a3cee7f1d49e7623cc5. Andreas Kohlbecker
04:30 PM bug #9384: DefaultReferenceCacheStrategy.createShortCitation() working not correctly for Teams wi...

Andreas Kohlbecker
04:29 PM bug #9384 (Closed): DefaultReferenceCacheStrategy.createShortCitation() working not correctly for...
see https://api.phycobank.org/phycobank/registrationDTO.json?identifier=http://phycobank.org/102662
The Team "Mo...
Andreas Kohlbecker
04:32 PM Revision 5abafe6a (cdmlib): fixing NPE in RegistrationDTOController when identifier is not found
Andreas Kohlbecker
04:32 PM Revision 854244ff (cdmlib): fix #9384 fixing author team truncation
Andreas Kohlbecker
03:19 PM bug #9383 (Closed): Adapt apache configuration to modified dataportal registration page URL pattern
Andreas Kohlbecker
02:57 PM bug #9383 (Closed): Adapt apache configuration to modified dataportal registration page URL pattern
the apache configuration of edit-community needs to be adapted to the changes made for #9220 Andreas Kohlbecker
02:42 PM Revision 72a0a6e9 (taxeditor): fix link for webapp war
Katja Luther
12:02 PM bug #7699: NPE when searching for specimen in bulk editor
Andreas Müller wrote:
> AK: Why was the duplicate removed from this ticket in #note-23?
upps sorry this was a mis...
Andreas Müller
12:01 PM bug #7699: NPE when searching for specimen in bulk editor
AK: Why was the duplicate removed from this ticket in #note-23? Andreas Müller
11:55 AM bug #9174: After longer inactivity NPE for cache
Andreas Müller wrote:
> This is maybe the same as #7699
??
Andreas Müller
11:16 AM bug #9382 (Resolved): For nomenclatural source show taxonname in referencing objects view
Katja Luther
11:15 AM bug #9382 (Closed): For nomenclatural source show taxonname in referencing objects view
In referencing objects view the taxon name of a nomenclatural source is not shown, only 'sourced object not available' Katja Luther
09:34 AM feature request #9381 (New): Refresh button for character matrix
After adding new characters the matrix needs to be closed and reopened to get the changes. To optimize the workflow a... Katja Luther

01/11/2021

10:13 PM feature request #9380 (New): It is not possible to show MediaRepresentation(Part) supplemental data
... as they can not be explicitly selected in the details view. This should be possible (e.g. for showing id and uuid) Andreas Müller
05:20 PM bug #8760: Presentation and linking of molecular data in specimen table too unclear
another example: http://caryophyllales.org/cactaceae/cdm_dataportal/taxon/d7bb858b-d8e0-4f9a-8a47-081d1cb740e9
Andreas Kohlbecker
04:15 PM Revision d365bbda (taxeditor): use OrderIndexComparator for distributionEditor
Katja Luther
04:13 PM Revision 2ec77b4a (taxeditor): add compare package
Katja Luther
02:37 PM bug #9379 (Closed): exclude disabled classifications from advanced taxon search form
Classifications which are disabled in the `admin/config/cdm_dataportal/settings` are to be excluded from the advanced... Andreas Kohlbecker
11:53 AM EDIT Platform Etablierung report #9378 (Closed): Meeting EDIT Platform documentation 2021-02-22
WebEx Meeting: https://fu-berlin.webex.com/fu-berlin/j.php?MTID=ma3d5a3cfabd30fbfdccb11e37122a1e4
## Teilnehmer:
...
Andreas Kohlbecker
11:45 AM EDIT Platform Etablierung task #8580 (Closed): Update documentation to latest revision of the Taxeditor
all Taxeditor documentation has been updates in Okt 2019, other activities are subject of #9377 Andreas Kohlbecker
11:44 AM EDIT Platform Etablierung task #9377 (In Progress): Update of other documentation

Documents to check:
* Manual-EDIT-Platform-01-INSTALL.docx **DONE** in #8580
* Manual-EDIT-Platform-02-DEMO.doc...
Andreas Kohlbecker
11:41 AM EDIT Platform Etablierung task #9108 (Closed): Prepare Kurs Borsch
completed Andreas Kohlbecker
11:39 AM EDIT Platform Etablierung task #9376 (New): git checkout of datportal module fails with locally modified files
locally modified files prevent from updating the local git clone to the required version of the dataportal module.
...
Andreas Kohlbecker
11:28 AM Revision 90d80081 (taxeditor): setText in TextWithLabelElement should use trim()
Katja Luther
11:09 AM feature request #9375 (Resolved): Alphabetical order for reference type drop down
Katja Luther
11:09 AM feature request #9375 (Closed): Alphabetical order for reference type drop down
mail AM:
weißt du, ob es einen Grund gibt, dass Section in der RefType Auswahl ganz oben steht, während alle ander...
Katja Luther
11:07 AM Revision e6e3f311 (taxeditor): alphabetical order for refType combo
Katja Luther
09:51 AM bug #9374 (Closed): ClassCastException when switching between media
When switching between media of one taxon following CCE is thrown:
~~~ text
last remote method : http://api.cyber...
Katja Luther

01/10/2021

11:05 AM Revision 0ccecb37 (cdmlib-apps): ref #1447 latest changes to PesiFindIdenticalNamesActivator and...
Andreas Müller
11:02 AM Revision cd156f0a (cdmlib-apps): latest changes to PesiTaxonExport
Andreas Müller
11:01 AM Revision 8b256be0 (cdmlib-apps): ref #6591 adapt PESI import to new original spellings handling
Andreas Müller
10:56 AM Revision c1a8faa1 (cdmlib): ref #6591 adapt PESI import to new original spellings handling
Andreas Müller
10:54 AM Revision b36706c7 (cdmlib): cleanup
Andreas Müller

01/09/2021

04:17 PM Revision 45c2e0b4 (cdmlib-apps): ref #1447 latest changes to PesiCommandLineMerge and PesiMergeOb...
Andreas Müller
04:11 PM Revision 600a00cd (cdmlib): cleanup
Andreas Müller
11:24 AM feature request #5575 (In Progress): DNA Sample requires CacheStrategy
I added a very first version for DNASample cache strategy to avoid the -titleCache not availble- messages Andreas Müller
11:22 AM Revision 26008f31 (cdmlib): ref #5573, ref #7612 adapt MediaSpecimenDefaultCacheStrategy to Occur...
Andreas Müller
11:21 AM Revision a30452ad (cdmlib): ref #5575 add first version of DnaSample cache strategy
Andreas Müller
01:36 AM feature request #7612: CacheStrategy for MediaSpecimens
I implemented now a very basic version of the cache strategy to avoid -titleCache not yet implemented- messages Andreas Müller
01:34 AM feature request #7612 (In Progress): CacheStrategy for MediaSpecimens
To me it is a bit unclear what the suggestion is how the MediaSpecimen cache strategy should be implemented. Andreas Müller
01:30 AM Revision 197a9558 (cdmlib): ref #7612 a first (preliminary) version of MediaSpecimenDefaultCacheS...
Andreas Müller
01:03 AM Revision 4dbcb616 (cdmlib): cleanup and use TermTestBase for model tests
Andreas Müller

01/08/2021

10:30 PM Revision fb6b774e (cdmlib): cleanup
Andreas Müller
07:52 PM bug #9373 (Closed): In specimen details view used within specimen tree editor titleCache field is...
instead you first have to click on the protected button which does not change the button but the text field gets enabled Andreas Müller
07:49 PM bug #9371: Media bulk does not persist data anymore
See also related tickets when fixing this. Andreas Müller
07:38 PM bug #9371 (Closed): Media bulk does not persist data anymore
except for create and delete
I tested for title, description, uri, supplemental data = > nothing worked
This is...
Andreas Müller
07:48 PM bug #9372 (Closed): in media details view unprotected title cache is not updated when underlying ...
e.g. when only URI exists usually the title is the file name but changing the URI does not change the title field.
H...
Andreas Müller
07:32 PM feature request #9370 (New): Search in media bulk editor should include search on URI
there are multiple usecases for this Andreas Müller
07:17 PM bug #9369 (Closed): Reference Detail is missing in MediaSpecimen details view
but the detail often is important. In general we could also implement as like a (single) source but there is some mor... Andreas Müller
03:56 PM bug #9368 (Closed): NullPointerException (NPE) in ManifestComposer.representationPartsToImageCon...
~~~
15:51:31.562 [cichorieae] [qtp990416209-33917] INFO e.e.c.r.c.iiif.ManifestController - doGetMedia() GET: /cich...
Andreas Kohlbecker
02:51 PM task #9132: Update cyprus images to Scaler default API and add thumbnails
Hi Andreas,
ich bin ja gerade dabei #9132 auch für Cichorieae zu machen. Die Links habe ich bereits alle umgestel...
Andreas Müller
12:36 PM task #9132: Update cyprus images to Scaler default API and add thumbnails
Links in the Cichorieae database have all be updated to use the scaler API.
Only open issue is now to reload metad...
Andreas Müller

01/07/2021

01:16 PM bug #9367: E+M shapefile Baltikum subarea borders always visible
This may require to modify the SLD file for the euromed layer Andreas Kohlbecker
01:15 PM bug #9367 (New): E+M shapefile Baltikum subarea borders always visible
gerade fällt mir auf, dass die Arealgrenzen innerhalb des Baltikums seltsamerweise nicht angezeigt werden, wenn es do... Andreas Kohlbecker

01/06/2021

02:27 PM feature request #9114: Handle malformed URIs in user type
In #9111#note-1 AK suggests to also encode fragment and query parts. This has **not** been implemented in the origina... Andreas Müller
02:15 PM feature request #9114: Handle malformed URIs in user type
Katja, can you please check if you can find out what the httpinvoker problem is. I currently can't start the TaxEdito... Andreas Müller
12:08 PM feature request #9114 (In Progress): Handle malformed URIs in user type
I implemented a new class eu.etaxonomy.cdm.common.URI and use this in model but also at other places like import sour... Andreas Müller
02:20 PM feature request #9111 (Resolved): Handle Malformed URIs
I removed the related code again as #9114 is now more or less implemented and URI encoding is now done in cdmlib. Ple... Andreas Müller
02:18 PM Revision 9916da4a (taxeditor): ref #9111, ref #9114 remove TaxEditor specific URI encoding code a...
Andreas Müller
01:07 PM Revision 84aa450d (cdmlib): uncomment RdfViewTest.testNameInformationRdf as it seems to work curr...
Andreas Müller
01:01 PM Revision 9691cba9 (cdmlib): cleanup
Andreas Müller
01:00 PM Revision c22065e1 (cdmlib): ref #9114 fix RdfViewTest
Andreas Müller
11:00 AM Revision 5402f2a6 (cdmlib): cleanup
Andreas Müller
11:00 AM Revision 4ad992ed (cdmlib): ref #9114 further adapt jsonConfigurations and add new constructor to...
Andreas Müller
10:50 AM Revision 3154d43f (taxeditor): ref #9114 further adapt some classes to URI wrapper in taxeditor
Andreas Müller
10:49 AM Revision adb769b4 (taxeditor): cleanup
Andreas Müller
10:18 AM Revision f9c3f295 (cdmlib): ref #9114 adapt json mapping to new URI wrapper
Andreas Müller
10:17 AM Revision 6b33224a (cdmlib): ref #9114 adapt javadoc for new URI wrapper user type
Andreas Müller
10:17 AM Revision 7ab5b913 (cdmlib): cleanup
Andreas Müller
01:35 AM Revision 4d87641f (cdmlib): ref #9114 add toFile() to URI to wrapper
Andreas Müller
01:30 AM Revision 5acb8103 (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)
Andreas Müller
01:29 AM Revision 2ab21f97 (taxeditor): cleanup
Andreas Müller

01/05/2021

12:34 AM Revision 7b06bd8f (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)
Andreas Müller
12:33 AM Revision 53e60781 (taxeditor): cleanup
Andreas Müller
09:49 PM Revision 15c5de38 (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)
Andreas Müller
09:49 PM Revision 00b46185 (taxeditor): cleanup
Andreas Müller
09:37 PM Revision 5dfe9f9b (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)
Andreas Müller
09:27 PM Revision 38556872 (taxeditor): cleanup
Andreas Müller
09:26 PM Revision f5a55599 (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)
Andreas Müller
09:07 PM Revision 5b2e9e6b (cdmlib): ref #9114 add compareTo to URI wrapper
Andreas Müller
09:02 PM Revision 96378f2b (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)
Andreas Müller
09:02 PM Revision 66eb9f49 (taxeditor): cleanup
Andreas Müller
08:34 PM Revision c7a6e70f (taxeditor): cleanup
Andreas Müller
08:34 PM Revision bf3cb991 (taxeditor): ref #9114 adapt some classes with URI to wrapper in taxeditor
Andreas Müller
08:16 PM Revision dd94c99b (cdmlib-apps): ref #9114 adapt URI to wrapper in cdmlib-app (cont.)
Andreas Müller
08:13 PM Revision 7cc5a1d7 (cdm-vaadin): cleanup
Andreas Müller
08:13 PM Revision 4cd4de2d (cdm-vaadin): ref #9114 adapt URIs to URI wrapper in vaadin
Andreas Müller
08:08 PM Revision 999006a7 (cdmlib): ref #9114 preliminary ignore RdfViewTest
Andreas Müller
08:07 PM Revision f588e53b (cdmlib): cleanup
Andreas Müller
08:05 PM Revision de8249cf (cdmlib): ref #9114 add URI Wrapper and replace all java.net.URI occurrences by...
Andreas Müller
07:45 PM Revision 20a31445 (cdmlib-apps): Adapt CentaureaCloneActivator to moved clone method
Andreas Müller
07:45 PM Revision 26790e9b (cdmlib-apps): ref #9114 adapt URI to wrapper in cdmlib-app
Andreas Müller
07:23 PM Revision b920f5c2 (cdmlib-apps): cleanup
Andreas Müller
05:45 PM Revision 2720ea2c (cdmlib): cleanup
Andreas Müller

01/04/2021

07:38 PM Revision 5da100f1 (cdmlib): ref #9366 fix test in TypeDesignationSetManagerTest
Andreas Müller
07:17 PM bug #9366: Specimen type designation with specimen having only collection name but not collection...
Please review Andreas Müller
07:14 PM bug #9366 (Resolved): Specimen type designation with specimen having only collection name but not...
Applied in changeset commit:cdmlib|99d3463856a840dd42c0532791b67b299b7b7fed. Andreas Müller
07:08 PM bug #9366 (Closed): Specimen type designation with specimen having only collection name but not c...
e.g. Scorzonera kurtii Yıld. in Ot Sist. Bot. Dergisi 18(2): 15. 2012 in Cichorieae DB
The holotype collection inf...
Andreas Müller
07:14 PM Revision 99d34638 (cdmlib): fix #9366 add collection name to specimen titleCache if collection co...
Andreas Müller
07:13 PM Revision 960711fc (cdmlib): cleanup
Andreas Müller

12/22/2020

09:09 PM bug #9365 (Closed): Reuse taxon does not work in new Taxon dialogue
partly copied from #5114.
If reuse taxon is selected still a new taxon is created.
Also the secundum field shou...
Andreas Müller
08:52 PM feature request #4896 (Closed): Bulkeditor: deduplication of objects of different type
Generally this works. Open issue is handled in #9361 Andreas Müller
08:37 PM task #9364 (In Progress): Cleanup authors with multiple & and protected names and teams
Andreas Müller
07:29 PM task #9364: Cleanup authors with multiple & and protected names and teams
Protected Teams(nomenclaturalTitle):
AlgaTerra: >14000
Cichorieae: 8487
Cuba: 14
Campanula: 1171
Caryo_amarant...
Andreas Müller
03:56 PM task #9364: Cleanup authors with multiple & and protected names and teams
Protected Names (still without fulltitlecache and authorshipcache):
Bromeliaceae: 584
Cichorieae: 476
Cuba: 567
...
Andreas Müller
03:17 PM task #9364 (Closed): Cleanup authors with multiple & and protected names and teams
(high priority only to first issue as it is related to #2200)
In context of #2200 I already checked names with >1 ...
Andreas Müller
08:16 PM feature request #2200 (Closed): Handle multiple authors for names correctly when caching
This can be closed as it works now as expected. Open data issues are handled in #9364
The only directly related is...
Andreas Müller
10:51 AM Revision dc310f85 (cdmlib): ref #4770, ref #4908, ref #5163 remove commented line as it seems to ...
Andreas Müller
10:10 AM Revision f8fa7762 (cdmlib): ref #4770, ref #4908, ref #5163 try to remove explicit setting of pro...
Andreas Müller
09:59 AM bug #5163 (Closed): Converting persons to team members may result in "-empty team-"
The "empty team" issue has been solved. The handling of team members has been moved to follow up ticket #9363 as it i... Andreas Müller
09:56 AM feature request #9363 (New): Allow to parse the new team when converting person to team
copied from #5163
When converting a person to a team does not get team members by default. We could add a configur...
Andreas Müller
09:48 AM Revision 6057b354 (cdmlib): ref #4770, ref #4908, ref #5163 some finetuning on convertPerson2Team
Andreas Müller

12/21/2020

12:14 AM bug #2578 (Closed): Improve "move synonym"
Now we always move the full homotypical group to the other taxon, so this is fixed.
The check that the synonym is ...
Andreas Müller
12:07 AM Revision 304fcfc8 (cdmlib): ref #4770, ref #4908, ref #5163 assert that team has protected nomenc...
Andreas Müller
11:39 PM bug #9362 (New): Convert Team to Person and vice versa saves immediately
When converting a team to a person or converting a person to a team the operation is immediately executed and not wai... Andreas Müller
11:32 PM feature request #4908 (Closed): adding convert Team to Person and Person to Team to the bulk editor
Open issues fixed or moved to new ticket. Andreas Müller
11:32 PM Revision b07820f4 (taxeditor): ref #4908 adapt error message for MergeException
Andreas Müller
11:31 PM Revision 01f597fe (cdmlib): ref #4770, ref #4908 add test for person is null in person2Team conve...
Andreas Müller
11:27 PM feature request #9361 (New): Give more specific information why person can not be converted to team
copied from #4908 and #4896 (says that current implementation is only a workaround as a suitable return type for isMe... Andreas Müller
11:09 PM Revision 58a9c0ab (cdmlib): ref #4770, ref #4908 handle person is null in person2Team converter
Andreas Müller
10:46 PM feature request #4770 (Closed): Allow convert person to team
the open issue is fixed now. We can close the ticket Andreas Müller
10:45 PM Revision d7943997 (cdmlib): ref #4770 handle unprotected titlecache for person2Team converter and...
Andreas Müller
10:39 PM Revision a7cbfd9c (cdmlib): ref #4770 fix clone for AgentBase.contact
Andreas Müller
10:38 PM Revision f3a14906 (cdmlib): cleanup
Andreas Müller
03:15 PM Revision 2e9c058b (cdmlib): cleanup
Andreas Müller
03:14 PM Revision 2b772077 (cdmlib): ref #4770 fix handling nomenclatural title for convertPerson2Team
Andreas Müller
03:00 PM Revision 94722700 (cdmlib): improve generics for save() method
Andreas Müller
02:59 PM Revision c9b75310 (cdmlib): cleanup
Andreas Müller
01:44 PM Revision 180577bd (taxeditor): ref #4908 adapt German menu label
Andreas Müller
01:36 PM feature request #4769 (Closed): Allow convert team to person
I used this intensively for deduplicating authors in cyprus DB and problems never occured. So I guess we can close th... Andreas Müller
01:26 PM bug #9360 (Feedback): Parsed hybrids can not be persisted
In Flora of Cyprus I tried to persist a hybrid formula (Aegilops biuncialis × geniculata) but got an NPE in TaxonName... Andreas Müller

12/18/2020

11:38 PM feature request #7894 (Closed): [CHECK] Import sourceNumber as Identifier for references
As ERS did not complain about missing numbers during the last 1.5 years I guess everything went well. Andreas Müller
11:37 PM feature request #7800 (Closed): Parse preliminary RefDetails
As the import did run and most of the above RefDetails were parsed I think we can close this ticket. However, there a... Andreas Müller
11:18 PM feature request #9204 (Closed): Update cdmlib and taxeditor dependencies
I close this ticket as related to v5.18 and open a new one for the remaining (and new) issues Andreas Müller
11:17 PM task #9359 (In Progress): Update cdmlib and taxeditor dependencies
A lot of version updates and updates to how dependencies are handled in TaxEditor has been done already in #9204.
...
Andreas Müller
11:13 PM task #9208 (Closed): Move cdmlib-print and cdmib-remote to taxeditor.printpublisher
I think we can close this ticket.
There is a very important follow up ticket #9351 (assigned to AK) that needs to ...
Andreas Müller
11:04 PM bug #9354 (Feedback): Sorting in distribution editor is broken
There are still open issues as the comparator does not follow the comparator contract and handling of names with rank... Andreas Müller
10:55 PM feature request #6076: Specimen biocase search should work on observations
What needs to be done to close this ticket?
Is it for review? If yes, how to review? Which search did not work? In T...
Andreas Müller
10:44 PM feature request #7262 (Closed): add progress monitor to csv print export and cdm light export
Looks like this is fixed (I did not check for CSV export as it is not so relevant anymore) Andreas Müller
10:34 PM bug #7013 (Closed): NonUniqueObjectException for setSecundumReferenceForSubtree
As far as I know and have tried this works now. Also the progress monitor seems to work again. Therefore I close the ... Andreas Müller
10:33 PM Revision 2f7a80f7 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree - try t...
Andreas Müller
10:26 PM Revision 863c4112 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree
Andreas Müller
10:25 PM Revision 14ac3831 (taxeditor): cleanup
Andreas Müller
10:06 PM bug #7098 (Closed): reuse name does not work
The method has been fully refactored in the meanwhile so I guess the above question is not relevant anymore. Closing ... Andreas Müller
09:57 PM Revision cd0bfb6e (cdmlib): try to fix failing test in suite (cont.)
Andreas Müller
09:32 PM Revision 5c696121 (cdmlib): ref #9349 add doRecursive to subtreeCloning
Andreas Müller
09:29 PM Revision 71f6ac57 (cdmlib): cleanup
Andreas Müller
09:29 PM Revision d1198615 (cdmlib): try to fix failing test in suite (cont.)
Andreas Müller
08:51 PM Revision 34140e24 (cdmlib): ref #9349 rename newClassificationName method (cont.)
Andreas Müller
08:48 PM Revision 1b873fea (cdmlib): try to fix failing test in suite
Andreas Müller
08:47 PM Revision 0120e292 (cdmlib): ref #9349 rename newClassificationName method
Andreas Müller
08:47 PM Revision 60617880 (cdmlib): cleanup
Andreas Müller
08:37 PM Revision 2da76eb1 (cdmlib): ref #9349 fix test for nomenclaturalStatus in name cloning
Andreas Müller
08:20 PM Revision e9612b75 (cdmlib): ref #9349 deprecate setReuseNames(false)
Andreas Müller
08:19 PM Revision c5bb8419 (cdmlib): ref #9349 move cloneSubtree to taxonNodeService
Andreas Müller
08:18 PM Revision 77c5bf22 (cdmlib): remove deprecated methods from classificationService
Andreas Müller
08:17 PM Revision 6077af92 (cdmlib): cleanup
Andreas Müller
07:41 PM feature request #4867 (Feedback): Add menu item for subtree cloning
It seems that the menu entry was removed or does not work anymore, even with experimental features being switched on.... Andreas Müller
07:25 PM task #9228: Adaptations to allow editing Centaurea in Flora of Greece
After running the import it became clear that not reusing names is not a good idea as
* handling name relationship...
Andreas Müller
07:03 PM Revision dcd42a41 (cdmlib): ref #9349 improve name cloning (including documentation as name cloni...
Andreas Müller
05:52 PM bug #9358: OptionalDataException during HTTP invoker call
If it is true that this problem occurs client side we should catch the exception in a way that it becomes clear that ... Andreas Müller
04:28 PM bug #9358: OptionalDataException during HTTP invoker call
Same issue but slightly different stacktrace
~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/rem...
Andreas Müller
04:27 PM bug #9358: OptionalDataException during HTTP invoker call
ERS: Das könnte sein. Ich habe auf meinem Rechner zuhause manchmal tatsächlich Kapazitätsprobleme - Ich werde das mal... Andreas Müller
04:20 PM bug #9358: OptionalDataException during HTTP invoker call
Lazy initializing distributions.
~~~
at org.hibernate.proxy.pojo.javassist.JavassistLazyInitializ...
Andreas Müller
04:11 PM bug #9358: OptionalDataException during HTTP invoker call
~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/remoting/common.service
last remote request client...
Andreas Müller
04:11 PM bug #9358 (New): OptionalDataException during HTTP invoker call
Note: first issue to solve is catching the exception client side as explained in comment 6 => #9629
The bug in com...
Andreas Müller
12:02 PM Revision 239cf764 (cdmlib): cleanup
Andreas Müller
12:01 PM Revision 1b50bc76 (cdmlib): move model comparators to own package
Andreas Müller
11:25 AM bug #9142: The Agent search dialog shows duplicated entries
Andreas Müller wrote:
> Thats what I thought. It is actually not really a wrong implementation of the method but due...
Katja Luther
11:14 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
Thats what I thought. It is actually not really a wrong implementation of the method but due to the above described s... Andreas Müller
10:54 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
First I thought it was because the search method was called twice but the real cause was the wrong implementation of ... Katja Luther
11:24 AM Revision 84e04ed3 (cdmlib): ref #9142: use clazz for FROM statement in getUuidAndAbbrevTitleCache...
Katja Luther
11:11 AM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without cl...
please review Katja Luther
10:59 AM bug #9264 (Resolved): Flag for toggle button for linking taxon with navigator looses/switch value...
Applied in changeset commit:taxeditor|d3334540d33466758ed37e2c7648f74f99420f43. Katja Luther
10:50 AM Revision f0cf9026 (cdmlib): ref #9142: fix getUuidAndAbbrevTitleCache for agents
Katja Luther
10:18 AM Revision d3334540 (taxeditor): fix #9264: use eventbus for updating link with taxon
Katja Luther

12/17/2020

08:11 PM Revision b7f8c9d4 (taxeditor): Merge branch 'hotfix/5.18.2'
jenkins
07:53 PM Revision 34753cbb (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
(cherry picked from commit e8d037bd184f407b89f09df7d93155119480d7b1) Andreas Müller
07:52 PM Revision 840605a4 (taxeditor): fix NPE for cloned lectotype typedesignations
(cherry picked from commit 11c7cb1711a7ed2dc828b81318fcaf34e34a3ef9) Katja Luther
07:14 PM Revision 45c8cb20 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18...
jenkins
04:08 PM Revision e8d037bd (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
Andreas Müller
03:50 PM Revision 5b06a013 (taxeditor): Merge branch 'hotfix/5.18.1'
root
03:40 PM Revision 7bc7988e (taxeditor): remove cdmlib-remote-webapp.war from git
Andreas Müller
11:49 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
Andreas Müller
11:39 AM bug #9142: The Agent search dialog shows duplicated entries
can you shortly explain what the problem was and why the commit fixes it? Andreas Müller
11:36 AM bug #9142: The Agent search dialog shows duplicated entries
Applied in changeset commit:taxeditor|359b77dda6efc328563cfd93e63aee841662b4e7. Katja Luther
11:30 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
This should be fixed. Please review. Katja Luther
11:35 AM Revision 359b77dd (taxeditor): fix #9142: fix doubled entries in agent selection dialog
Katja Luther
10:35 AM Revision 59066f6b (taxeditor): adapt SpringSource GA Repository to https
Andreas Müller
10:34 AM feature request #9337: Open issues for reimplementation of termtree editors
16. Add "Open in Vocabulary" to term tree editor context menu; this is generally needed the primary usecase is to all... Katja Luther
09:16 AM feature request #9337 (In Progress): Open issues for reimplementation of termtree editors
Katja Luther
10:10 AM feature request #8289 (Resolved): Add "Open in RefObj view" to term editor context menu
please review. Katja Luther
10:09 AM Revision dc2e648b (taxeditor): ref #8289: add open in to term editor context menu
Katja Luther
09:13 AM bug #9344: Datasets in Descriptive Dataset Navigator should be ordered
please review Katja Luther
09:13 AM bug #9344 (Resolved): Datasets in Descriptive Dataset Navigator should be ordered
Applied in changeset commit:taxeditor|b5f32b5d274ff26e8bf15ed9f42c61f028e79584. Katja Luther
09:13 AM Revision b5f32b5d (taxeditor): fix #9344: add comparator to descriptive dataset navigator
Katja Luther
08:48 AM bug #9353 (Resolved): Copy & Paste creates dirty data in term trees
Applied in changeset commit:taxeditor|27ca515332a1068e6f49ccff9a4466bce556a548. Katja Luther
08:48 AM Revision 27ca5153 (taxeditor): fix #9353: fix c&p in term trees
Katja Luther

12/16/2020

04:29 PM Revision 9c9bb6b3 (taxeditor): remove doubled is
Katja Luther
04:17 PM Revision 63fd9baa (taxeditor): rename labels for DDS navigator
Katja Luther
04:13 PM Revision c34d4827 (taxeditor): open in of nomencl.source for the sourced name
Katja Luther
03:16 PM Revision 25cc3cf4 (taxeditor): adapt DescriptionHelper for refObjects description of nomclat. sou...
Katja Luther
03:02 PM Revision b63ed015 (taxeditor): fix NPE for cloned lectotype typedesignations
Katja Luther
03:01 PM Revision 11c7cb17 (taxeditor): fix NPE for cloned lectotype typedesignations
Katja Luther
09:46 AM Revision 4e3c1b39 (taxeditor): remove error message for MAN without sec
Katja Luther
09:44 AM Revision cca35f36 (taxeditor): do not expand the server side preferences
Katja Luther

12/15/2020

12:43 PM Revision ea6ec182 (taxeditor): ref #9337: remove obsolete part descriptions
Katja Luther
12:40 PM Revision f6ba2ccb (taxeditor): ref 9337: rename all termtree related classes
Katja Luther
11:36 AM feature request #9338 (Resolved): Restructure term menus
Both menues have the same structure and also the handling of opening the editors are synchronized. Katja Luther
11:33 AM Revision 22ac94a9 (taxeditor): ref #9338: restructure term menues and adapt handling
Katja Luther
 

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