Activity
From 01/16/2020 to 02/14/2020
02/14/2020
- 05:18 PM bug #8848: Search fails with low data rate network (64kbit/s) network connection due to lost authentication
- It is a question of which context holder strategy is being used in the application. By default `ThreadLocalSecurityCo...
- 02:44 PM bug #8848 (Feedback): Search fails with low data rate network (64kbit/s) network connection due to lost authentication
- I do not fully understand this discussion. How can the thread strategy influence if authenticaion fails with a low da...
- 01:12 PM bug #8848 (Closed): Search fails with low data rate network (64kbit/s) network connection due to lost authentication
- Andreas Kohlbecker wrote:
> Do you know about any reason why the thread local strategy has been used? If not we can ... - 12:59 PM bug #8848 (Resolved): Search fails with low data rate network (64kbit/s) network connection due to lost authentication
- Do you know about any reason why the thread local strategy has been used? If not we can close this ticket.
- 12:46 PM bug #8848 (Feedback): Search fails with low data rate network (64kbit/s) network connection due to lost authentication
- During testing the taxeditor with low data rate network conditions [64kbit/s] (see #8812), the search fails, since th...
- 12:57 PM Revision 5a87d221 (taxeditor): ref #8848 switching from thread local to global secutity context holder strategy
- 10:54 AM task #8047: Remaining issues in TaxDistributionEditor
- > ~~Disable "Add Source" or "Remove Source" depending on the current state of source selection~~
> * Use icon (delet...
02/13/2020
- 04:53 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- The above error is perfectly reproducible with limited rate networks (64kbit/s):
~~~
15:16:06,962 INFO CachingHt... - 11:59 AM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- With `httpcomponentes` updated to version 4.5.11 the taxeditor works much better.
However after making an accepted... - 11:52 AM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas Kohlbecker wrote:
> > > Andreas Müller wrote:
> > >... - 03:46 PM Revision 90b91cfb (cdmlib-apps): minor changes to GreeceImageActivator
- 01:14 PM bug #8847: Name in Source is added always when moving description from one taxon to another
- sorry, yes please review
- 01:13 PM bug #8847: Name in Source is added always when moving description from one taxon to another
- should I review?
- 11:46 AM bug #8847 (Resolved): Name in Source is added always when moving description from one taxon to another
- Applied in changeset commit:taxeditor|ea45bb4360ae76275fde0593227d7cb0431c4ee7.
- 11:43 AM bug #8847 (Closed): Name in Source is added always when moving description from one taxon to another
- When choosing move description to another taxon (without setting name in source) the name in source is added.
- 01:11 PM bug #8562 (In Progress): Remaining issues for preference pages
- 01:04 PM Revision d41ad916 (taxeditor): ref #8562: continue work on preference pages - supplemental data admin
- 12:52 PM Revision 942f6e18 (taxeditor): ref #8562: continue work on preference pages - supplemental data
- 11:54 AM Revision d147dfd6 (taxeditor): ref #8562: continue work on preference pages
- 11:44 AM Revision ea45bb43 (taxeditor): fix #8847: fix name in source addition for moving description
- 11:07 AM Revision f1765720 (taxeditor): updating nebula widgets 1.0.0.20190715144 -> 1.0.0.20191224110
02/11/2020
- 01:35 PM Revision 6720d336 (cdmlib-apps): ref #1447 improve command line merger
- 01:08 PM Revision 8b87aa0b (taxeditor): use PreferencePredicate for MobotOpenUrlServiceAccessPoint instead of local PreferenceKey
- 01:01 PM Revision 4db0e47a (taxeditor): fix handleGeneralRequest, load(result) instead of load(result.getCdmEntity())
- 09:50 AM Revision 69213a6e (taxeditor): ref #8562: add admin preference page for multilanguage support
- 08:42 AM Revision c1ad99d9 (taxeditor): ref #8812 managing dependencies via maven, removing duplicate dependencies, updating httpclient
- 08:35 AM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Andreas Müller wrote:
> > > I don't think the dependency han...
02/10/2020
- 05:27 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > I don't think the dependency handling for httpcomponents is c... - 05:16 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- Andreas Müller wrote:
> I don't think the dependency handling for httpcomponents is correct. Dependencies inherited ... - 04:53 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- I don't think the dependency handling for httpcomponents is correct. Dependencies inherrited from cdmlib are handled ...
- 05:23 PM Revision a2839297 (cdmlib): allow adding reverse representations to taxon relationship type during import
- 05:22 PM Revision b729928e (cdmlib): cleanup
- 05:20 PM Revision bed66cf1 (cdmlib): remove commented test dependencies from ext-pom
- 04:56 PM task #8840: Display identifiers in the dataportal
- Andreas Kohlbecker wrote:
> Also consider transformation of IPNI-LSIDs to identifiers.
Can you explain what is me... - 12:44 PM Revision 75785495 (taxeditor): cleanup
- 12:36 PM Revision b83b73a7 (taxeditor): ref #8812 logging of request duration in case of socket timeouts
- 12:34 PM Revision d9511145 (taxeditor): ref #8812 connect request timeouts and more doc on timeouts
- 11:38 AM Revision 76f6b44c (taxeditor): ref #8812 upgrading httpcomponents to 4.5.11 - cleanup
- 10:54 AM Revision 82227023 (taxeditor): ref #8812 upgrading httpcomponents to 4.5.11
02/06/2020
- 12:03 PM bug #8846 (Worksforme): Correctly parsed nomenclatural reference uncorrectly saved when taxon has relationship
- Hallo liebes Editor Team,
ich habe einen etwas merkwürdigen Fehler, der ohne Fehlermeldung auftritt.
Wenn ich bei d... - 10:41 AM task #8844 (Closed): distinguish SocketTimeoutException from ConnectException
- this looks good.
02/05/2020
- 05:51 PM bug #8845 (Closed): external links: GGBN not shoing up in admin section
- 05:50 PM bug #8845 (Resolved): external links: GGBN not shoing up in admin section
- Applied in changeset commit:cdm-dataportal|10c4424f1f9360d42e2c22d9c4ddddc49b98e88b.
- 05:35 PM bug #8845 (Closed): external links: GGBN not shoing up in admin section
- This is most probably caused by commenting the "Fairchild Guide To Palms" link. By this the array keys are no longer ...
- 05:50 PM Revision 10c4424f (cdm-dataportal): fix #8845 fixing bug in ext-links introduced by commenting broken link and invalid key for GGBN
- 04:51 PM task #8844 (Resolved): distinguish SocketTimeoutException from ConnectException
- Hi Katja, can you please have a look at my solution?
- 03:16 PM task #8844 (Closed): distinguish SocketTimeoutException from ConnectException
- SocketTimeoutExceptions which are caused by bad network quality between client and server should be distinguished fro...
- 04:50 PM Revision c29cc6f1 (taxeditor): ref #8844 specific message in case of SockeTimeoutExceptions
- 04:49 PM Revision 2c520578 (taxeditor): ref #8812 replacing deprecated usage of apache HttpClient by new classes
- 01:53 PM Revision 090b67e0 (cdmlib): ref #8562: adapt language preference predicates
- 12:39 PM bug #8843 (New): Revise term caching
- The actual mechanisms of the term caching in the teaxeditor is unclear and undocumented. Several parallel classes and...
- 12:15 PM bug #8842 (Resolved): CdmServiceRequestExecutor is not stateleass and neither thread save nor access synchronized
- The commit:taxeditor|1c21abc1 most probably removed at least two potential root causes for MultipleRepresentation pro...
- 11:21 AM bug #8842 (In Progress): CdmServiceRequestExecutor is not stateleass and neither thread save nor access synchronized
- 12:03 PM Revision e2bff0b1 (taxeditor): ref #8842 claning up - removing obsolete classes and renaming
- 12:02 PM Revision 1c21abc1 (taxeditor): ref #8842 replacing caching in CdmServiceRequestExecutor by CachingHttpInvokerProxyFactoryBean to avoid having states
02/04/2020
- 04:34 PM Revision 7a05f578 (taxeditor): ref #8812 proper exception handling in RequestExecutor for more meaningful error messages
- 01:59 PM bug #8842 (Resolved): CdmServiceRequestExecutor is not stateleass and neither thread save nor access synchronized
- CdmServiceRequestExecutor uses the field
~~~java
private RemoteInvocation currentRemoteInvocation;
~~~
to re... - 11:10 AM Revision 9aae99e8 (taxeditor): ref #8841 cleaning up application context config - step 1
- 10:28 AM task #8841 (In Progress): clean up application context configuration
- 10:28 AM task #8841 (In Progress): clean up application context configuration
- The spring app config in the taxeditor project is messy:
* obsolete XML configuration files
* obsolete context sc...
02/03/2020
- 05:12 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- an analysis of the reported RemoteAccessException as found in my Emails shows that the exceptions are having specific...
- 03:36 PM Revision 90b2c296 (cdm-dataportal): ref #8813 installing new version of DejaVu downloaded from font-squirrel
- 02:47 PM feature request #8044: Add "Move to..." menu to term editor
- Applied in changeset commit:taxeditor|bac71f46b6eb8bf94a76efbb9217525700259da2.
- 02:37 PM feature request #8044 (Resolved): Add "Move to..." menu to term editor
- this is fixed now, please review
- 02:47 PM Revision bac71f46 (taxeditor): fix #8044: remove injected method
- 02:45 PM task #8813: Zen theme base font with better redability
- The DejaVu font seems to cause Problem in Win10 where the render engine of edge and FF apparently is not using font s...
- 02:39 PM bug #8763 (Duplicate): Remaining issues for "Move term" in term editor
- as this ticket contains nearly the same issues mentioned in #8044, I close this ticket as duplicate
- 02:36 PM Revision cb827f5e (taxeditor): ref #8763: disable multiselect
- 02:25 PM task #8840 (New): Display identifiers in the dataportal
- identifiers for all cdm types need to be shown (`IdentifiableEntity.identifier`)
Identifiers exist in Caryophyllal... - 01:35 PM Revision 419f60bc (cdm-dataportal): Revert "version param for fonts to force reloading"
- This reverts commit 641bfcf8e442ac671dea910b9392ba610bc06237.
- 01:30 PM Revision 641bfcf8 (cdm-dataportal): version param for fonts to force reloading
- 11:30 AM Revision a57fcfb4 (taxeditor): ref #8763: set search button to default
- 09:54 AM Revision 501ec636 (cdmlib): ref #8044: add missing termcollection dto
01/31/2020
- 09:47 AM Revision 87bd976a (cdmlib-apps): ref #1447 further improve findIdenticalNames for PESI
- 09:46 AM Revision fbdb38bb (cdmlib-apps): add inverse labels to pseudoaccepted relationship
- 09:45 AM Revision 6a6d7b26 (cdmlib-apps): cleanup
01/30/2020
- 05:07 PM bug #8839: Role misses toString method
- Is there a reason for using getRole() instead of directly referencing the role field? For toString() methods it is be...
- 11:39 AM bug #8839 (Resolved): Role misses toString method
- Applied in changeset commit:cdmlib|a2c52f5908705d903861a83541ae556214bff646.
- 11:36 AM bug #8839 (Closed): Role misses toString method
- Error messages regarding missing roles are quite cryptical these days:
~~~
org.eclipse.e4.core.di.InjectionExcept... - 04:54 PM feature request #4011: disallow changing publish flag for users with unsuffcient rights
- So I put it back to you. Please decide if you need to pass it to Katja. Also if you want to change the milestone. But...
- 11:00 AM feature request #4011: disallow changing publish flag for users with unsuffcient rights
- this is still an open issue and causes confusion to the E+M editor - needs to be fixed quite soon.
- 03:10 PM bug #8812 (In Progress): Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- 02:51 PM Revision 2d38478f (taxeditor): ref #8044: search for vocs and do not show selected term
- 02:50 PM Revision 1626b3d2 (cdmlib): ref #8044: add service/persistence method to get vocDto for pattern
- 11:39 AM Revision a2c52f59 (cdmlib): fix #8839 toString() for Role
- 11:33 AM bug #8838 (Rejected): misapplied names without authors are not found
- *Orobanche elatior* has an authorship and it is actually found as "*Orobanche elatior* Sutton" but it is not clear th...
- 11:14 AM bug #8838 (Rejected): misapplied names without authors are not found
- Example:
Orobanche elatior misapplied name for Orobanche centaurina in europlus med - 10:56 AM bug #8837 (Worksforme): Name editor is not updated after change accepted to synonym
- 10:07 AM task #8835: DISCUSS if the UPDATE & DELETE permission stategy should become a general principle in the cdmlib
- I take this ticket as I am more involved into this topic.
01/29/2020
- 11:28 PM task #8835: DISCUSS if the UPDATE & DELETE permission stategy should become a general principle in the cdmlib
- I think I should not be assignee. Katja, Andreas, can you please decide who will care?
- 05:06 PM task #8835 (New): DISCUSS if the UPDATE & DELETE permission stategy should become a general principle in the cdmlib
- During the E+M Training (2020-01-19) it turned out that the current default permissions are not complete to allow con...
- 05:09 PM bug #8836 (Closed): add default role Editor-Reference (REFERENCE.[UPDATE,DELETE], TEAMORPERSONBASE.[UPDATE,DELETE])
- During the E+M Training (2020-01-19) it turned out that the current default permissions are not complete to allow con...
- 10:24 AM feature request #8749 (Resolved): Add proposalProvider to AbstractComboElement
- 09:05 AM feature request #8749 (In Progress): Add proposalProvider to AbstractComboElement
01/28/2020
- 02:02 PM bug #8733 (In Progress): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- When adding or deleting a taxonnode filter to descriptive dataset the specimen cache of the matrix is set to null and...
- 01:58 PM Revision cea4a1b4 (cdmlib): ref #8733: load descritive dataset before getting specimen
- 01:58 PM Revision fa4b35d0 (cdmlib): handle cf determinations correctly
- 12:32 PM bug #8833: distribution editor: Exception when filtering by taxon
- solving this issue may be obsolete once #8834 is solved
- 12:30 PM task #8834 (Closed): use TaxonNodeDto instead of UuidAndTitleCache
- in #8815 the UuidAndTitleCache methods are to be removed. The vaadin apps need to be adapted accordingly.
- 12:00 PM feature request #8756: Refresh button for structure tree and property tree in Character Editor
- please review
- 11:59 AM feature request #8756 (Resolved): Refresh button for structure tree and property tree in Character Editor
- Applied in changeset commit:taxeditor|e751d1723a238ce06ee6b1dc0cd67399a7ae8618.
- 12:00 PM Revision 5ad5e48c (taxeditor): fix #8756: code cleaning
- 11:59 AM Revision e751d172 (taxeditor): fix #8756: add refresh button to structure and property tree viewer
- 11:42 AM bug #8828 (Resolved): statistical values must not show empty brackets
- Applied in changeset commit:cdm-dataportal|7f36e33afada1e19bcf605586e9ade4c64a2c264.
- 11:42 AM Revision 7f36e33a (cdm-dataportal): fix #8828 removing empty brackets from statistical values in QuantitativeData and cleaning up
- 11:39 AM feature request #8688 (Resolved): Make OriginalSourceBase.cdmSource visible in TaxEditor
- now only titleCache (for identifiable entities) or uuid (for cdmBase objects) is shown
- 11:37 AM Revision 27c58d84 (taxeditor): ref #8688: show only titleCache for IdentifiableEntities
- 09:55 AM Revision 5a9bfdf8 (taxeditor): ref #8832: fix deselction of status when changing area in distribution detail element
01/27/2020
- 04:49 PM bug #8833: distribution editor: Exception when filtering by taxon
- This seems to be a bug in TaxonNodeDaoHibernateImpl.getUuidAndTitleCache()
- 04:40 PM bug #8833 (Duplicate): distribution editor: Exception when filtering by taxon
====
might be fixed by fixing #8834
====
~~~
at javax.servlet.http.HttpServlet.service(HttpServle...- 02:31 PM bug #8832 (Resolved): Choosing the area for distribution in details view clears the selected status
- When selecting the area for a distribution and the status is already choosen, the status is cleared again.
- 12:49 PM bug #8830 (Resolved): add missing spaces to statistical value representations
- Applied in changeset commit:cdm-dataportal|2dae60cd0f256dbf1c93bfcffaa28d0ca73d4c85.
- 12:48 PM bug #8830 (In Progress): add missing spaces to statistical value representations
- 09:45 AM bug #8830 (Closed): add missing spaces to statistical value representations
- Leerzeichen vor der Einheit und der Klammer:
~~„0 [] m“.~~ corrected after duscussion to: "0 m []"
- 12:49 PM Revision 2dae60cd (cdm-dataportal): fix #8830 adding missing spaces to statistical value representations
- 11:54 AM bug #8831: saving name editor throws NPE
- Maybe this is because the scientific name is passed as name object not the uuid and loaded on server side.
- 10:51 AM bug #8831 (Worksforme): saving name editor throws NPE
- after editing authors in name editor the following exception appears, this exception
~~~
last remote method : ht... - 11:42 AM bug #8829 (Closed): NullPointerException (NPE) in TaxonNodeService
- Your fix is correct.
I added a further null check in the controller method so that the the service responds with t... - 10:24 AM bug #8829 (Feedback): NullPointerException (NPE) in TaxonNodeService
- The NPE in TaxonNodeServiceImpl.dto has been fixed. Please review and check that controller returns correct http erro...
- 09:42 AM bug #8829 (Closed): NullPointerException (NPE) in TaxonNodeService
- the request http://api.cybertaxonomy.org:80/euromed/taxonNode/f7a20e6e-c144-4d9e-b307-03a1f3b5305a causes
~~~
... - 11:40 AM Revision 24ebd429 (cdmlib): ref #8829 sending http error code in case taxonNode uuid is not found
- 10:38 AM Revision acffd6b0 (cdmlib): cleanup
- 10:22 AM Revision 4a428ec2 (cdmlib): ref #8829 fix NPE in TaxonNodeServiceImpl.dto
01/24/2020
- 01:23 PM bug #8828: statistical values must not show empty brackets
- Andreas Kohlbecker wrote:
> Hallo,
>
>
>
> ggf auch auf das Leerzeichen vor der Einheit (und ggf. der Klamme... - 01:23 PM bug #8828: statistical values must not show empty brackets
- Hallo,
ggf auch auf das Leerzeichen vor der Einheit (und ggf. der Klammer) achten. Ich habe nicht überprüft, ... - 11:23 AM bug #8828 (Closed): statistical values must not show empty brackets
- bei den Höhenangaben gab es nun jahrelang bei den Arten, wo Max. und Min. gleich sind, den Standard, dass dann nicht ...
- 11:47 AM bug #8548: ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, new thesis)
- Layout in Reference editor is fine, now. If corrected within the production UI the ticket can be closed. Thanks a lot.
- 11:30 AM bug #8548 (Resolved): ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, new thesis)
- Hallo Henning, das Layoutproblem ist gelöst. Bitte teste das einmal im Test Server.
- 11:27 AM bug #6036 (Closed): Problems with deleting type names
- 11:12 AM bug #6036: Problems with deleting type names
- The problem was that removing a NameTypeDesignation did not delete the NameTypeDesignation this is fixed now. I will ...
- 11:24 AM Revision 5d429a5f (taxeditor): fix #8749: fix selection in combo with proposalProvider
- 11:18 AM Revision 88bf6890 (cdm-vaadin): ref #8548 fixed width for grid cells in reference editor
01/23/2020
- 03:24 PM Revision 0b79b471 (cdm-vaadin): ref #8706 adapting to new DateHeaderFilter package name
- 03:23 PM Revision 3db08ffa (cdmlib): ref #8706 moving DateHeaderFilter to cdmlib-remote to make it available for cdm-vaadin
- 01:53 PM task #8827 (New): Add Chapters to Term, TermTrees, Characters to the platform user documentation
- 01:36 PM bug #8785 (Feedback): Move functionality of buttons to context menu of the character matrix
- removing of a specimen description from a descriptive dataset works in character matrix by selecting the whole row of...
- 01:16 PM task #8826 (New): DISCUSS: Display of name facts in the portal
[walter:]
Wenn ich mich richtig erinnere, greift das Portal bei der Darstellung von Fakten auf einen Feature Tre...- 11:51 AM bug #8784: Deleting a specimen description not possible
- please review
- 11:40 AM bug #8784 (Resolved): Deleting a specimen description not possible
- Applied in changeset commit:taxeditor|8cc448f70b9f3752a606b01d147dcd46aa685178.
- 11:40 AM Revision 8cc448f7 (taxeditor): fix #8784: update factual data view after deleting specimen description
- 10:49 AM bug #8825: Name features are shown in menu of factual data view of taxa when no preferences defined
- please review.
- 10:48 AM bug #8825 (Resolved): Name features are shown in menu of factual data view of taxa when no preferences defined
- Applied in changeset commit:taxeditor|b19e08c16ecd56b8e2b425975573c07ddd006a6b.
- 10:44 AM bug #8825 (Closed): Name features are shown in menu of factual data view of taxa when no preferences defined
- The right click menu of a taxon factual data set shows taxon and name features when no preferences defined. The name ...
- 10:48 AM Revision b19e08c1 (taxeditor): fix #8825: fix creation of default taxon feature tree
- 10:00 AM bug #8824 (Worksforme): No dirty flag when adding new factual data set
- mail AM:
bei mir wird das dirty Flag nicht gesetzt, wenn ich Fact DataSets anlege, egal ob NameFacts oder TaxonFac... - 09:55 AM Revision 1630e9b0 (cdm-vaadin): ref #8706 DateHeaderFilter to add Date headers to all servlet responses
- 09:39 AM bug #8782 (Resolved): Delete a description included in a CdmSource should not be possible
- now deletion is possible only for not referenced descriptions.
01/22/2020
- 03:09 PM bug #8791 (Resolved): Measurement units are not assigned to quantitative data in matrix
- please review.
- 03:08 PM Revision b0127ea9 (taxeditor): ref #8791: add unit to quantitative data dialog
- 03:08 PM Revision 0e8f77ab (cdmlib): ref #8791: add unit to rowWrapperDto when actualise quantitative data
- 02:43 PM feature request #8823 (New): Better exception handling in cdm light export
- Sometimes excpetions appear because of missing data (e.g. emtpy textual type designations) or wrong sort index. These...
- 11:46 AM Revision 8ec811cd (cdmlib): ref #1447 improve findIdenticalNames
- 11:43 AM Revision 0a1bd040 (cdmlib-apps): ref #1447 Improve FindIdenticalNames for PESI
- 11:41 AM Revision f39dcda1 (cdmlib-apps): ref #1447, ref #1445 TaxonNode mover for high level taxa
- 11:40 AM Revision b3273569 (cdmlib-apps): ref #1447 implement PESI commandline merger
- 11:37 AM Revision 40bb5f10 (cdmlib-apps): ref #2826 improve IF import to PESI (merge) requirements
- 10:02 AM feature request #8624 (Resolved): Add abbrev title cache to search in bulk editor
- 10:01 AM Revision 72836bf3 (taxeditor): ref #8624: call service methods to search for titleCache and abbrevTitleCache
- 10:00 AM Revision bdde6137 (cdmlib): ref #8624: add dao and service methods to search for titlecache or abbrev title cache
01/21/2020
- 04:56 PM Revision 09e88a38 (cdmlib): ref #1447 reimplement getParentTaxonNodeDtoForRank() to fetch taxa of specific higher ranks
- 04:53 PM Revision 2d726275 (cdmlib): ref #1447 add ancestor id splitter to TreeIndex
- 02:14 PM Revision 820ca4ec (cdmlib): cleanup
- 12:29 PM Revision 4ebd1ae8 (cdmlib): code cleaning
- 12:11 PM Revision 5af794eb (cdmlib): cleanup and add CdmRegEx
- 10:55 AM feature request #8749: Add proposalProvider to AbstractComboElement
- this ticket was solved for vocabulary combo elemtents in 5.12 and for all other combo elements in 5.13
- 10:55 AM feature request #8749 (Resolved): Add proposalProvider to AbstractComboElement
- Applied in changeset commit:taxeditor|aae0ca069a639007aa180a7193fa0b510c0499d7.
- 10:55 AM Revision aae0ca06 (taxeditor): fix #8749: move proposal adapter creation to method in abstractComboDetailElement
- 09:32 AM feature request #8822 (Worksforme): Handle exceptions caused by sortinex problems in cdm light export
- The exception handling in cdm light should handle sortindex problems with better exception message.
At the moment...
01/20/2020
- 04:44 PM Revision f7d60a17 (cdmlib): cleanup
- 04:44 PM Revision 2a055418 (cdmlib): add parameterized HQL API access
- 04:04 PM bug #8821 (New): ConcurrentModificationException during deduplication in bulk editor
- Hallo,
etwas Neues – Referenzen Deduplizierung, nach delete Nachfrage Save für vorheriges Delete.
HG
W
~~~
log... - 03:53 PM bug #8627: NullPointerException (NPE) on saving Specimen Editor (list)
- AK, why is this a **copy** of #8626?
Did you mean "related to"? - 03:50 PM bug #7699 (New): NPE in CdmTransientEntityCacher.getCacheElement()
- This exception appears quite often therefore I put it to the current milestone.
We need to find to handle it so t... - 03:06 PM feature request #8721 (Closed): Use webservice to get all biocase provider listed by gbif
- Generally this works. Open issues moved to #8820
- 03:04 PM task #8820 (New): Improve BioCase provider selection list
- Copied from #8721
* The access points should be searchable also by the accesspoint title, For the BGBM Herbarium t... - 02:54 PM Revision caac9df5 (cdmlib): ref #8819: handle cf and aff names in abcd import
- 02:54 PM Revision c02db033 (cdmlib): ref #8817: workaround for timeperiods with time 00:00:00 for missing time information
- 02:52 PM feature request #8489 (Resolved): Further issues for DB preferences
- putting back to 5.10 for review, no changes since then. Follow up ticket for open issues: #8818.
During review put n... - 02:51 PM feature request #8819 (New): import cf. and aff. names as child taxa of the mentioned genus
- Names with cf. or aff. should handled as child taxa of the mentioned genus for example *Amphora cf. minutissima W. Sm...
- 02:48 PM task #8818 (New): Remaining issues for DB preferences
- Copied from #8489
* check wether all (wanted) preferences are available as db preferences
* menu.disableMul... - 02:25 PM bug #8817 (New): abcd import gathering date contains T00:00:00 when time is missing
- The string comes from biocase and the parser is not able to parse it.
This time information is wrong, this should be... - 02:00 PM Revision f96382ee (cdm-server): Merge branch 'release/5.12.0' into develop
- 02:00 PM Revision 9d851ccc (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 01:59 PM Revision ef52afd4 (cdm-server): updating poms for branch'release/5.12.0' with non-snapshot versions
- 01:58 PM Revision 61c84f74 (cdm-webapp): Merge branch 'release/5.12.0' into develop
- 01:58 PM Revision f13c442c (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 01:57 PM Revision 005dbf5d (cdm-webapp): updating poms for branch'release/5.12.0' with non-snapshot versions
- 01:57 PM Revision 2fe20cbb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.12.0
- 01:54 PM Revision 3f4fc198 (cdm-vaadin): Merge branch 'release/5.12.0' into develop
- 01:54 PM Revision d411f69c (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 01:51 PM Revision 3a0c7116 (cdm-dataportal): Merge branch 'release/5.12.0' into develop
- 01:51 PM Revision 01f28a92 (cdm-dataportal): updating poms for branch'release/5.12.0' with non-snapshot versions
- 01:51 PM Revision 6c1a05e1 (cdm-dataportal): release-preparation: production level css
- 01:51 PM Revision 4b9974cd (taxeditor): Merge branch 'release/5.12.0' into develop
- 01:51 PM Revision 7da9e82a (taxeditor): Merge branch 'release/5.12.0'
- 01:50 PM Revision 6d263bef (cdm-vaadin): updating poms for branch'release/5.12.0' with non-snapshot versions
- 01:50 PM Revision 381041c8 (cdm-vaadin): jenkins bumping cdmlib.version to 5.12.0
- 01:36 PM Revision b47ca96f (cdmlib): Updating develop poms back to pre merge state
- 01:35 PM Revision 5bf0c1e8 (cdmlib): Merge branch 'master' into develop
- 01:35 PM Revision f46e6cd3 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 01:35 PM Revision 8aeb85f2 (cdmlib): Merge branch 'release/5.12.0'
- 01:19 PM Revision 9b054f3a (cdmlib): updating poms for branch'release/5.12.0' with non-snapshot versions
- 01:16 PM Revision 41786238 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.12.0-SNAPSHOT
- 01:16 PM Revision a73e3a0c (cdm-webapp): updating poms for 5.13.0-SNAPSHOT development
- 01:16 PM Revision 34255452 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.13.0-SNAPSHOT
- 01:03 PM Revision a4c74614 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.0-SNAPSHOT and cdmlib version : 5.13.0-SNAPSHOT
- 01:03 PM Revision abbd53ac (taxeditor): Updated version in pom / project files to taxeditor version : 5.12.0 and cdmlib version : 5.12.0
- 01:02 PM Revision e488b742 (cdm-vaadin): jenkins bumping cdmlib.version to 5.12.0-SNAPSHOT
- 01:02 PM Revision 85bd4946 (cdm-vaadin): updating poms for 5.13.0-SNAPSHOT development
- 01:02 PM Revision 06ece406 (cdm-vaadin): updating poms for 5.12.0 branch with snapshot versions
- 01:02 PM Revision e3d5292e (cdm-vaadin): jenkins bumping cdmlib.version to 5.13.0-SNAPSHOT
- 01:02 PM Revision ca702305 (cdm-dataportal): updating poms for 5.13.0-SNAPSHOT development
- 01:02 PM Revision 6dbb7b01 (cdm-server): updating poms for 5.13.0-SNAPSHOT development
- 12:59 PM Revision eeabb43a (cdmlib): updating poms for 5.13.0-SNAPSHOT development
- 12:55 PM feature request #8677 (Closed): Add distribution aggregation to set subtree menu
- >source type selection per source mode
maybe there is a misunderstanding, I meant source **type** . There is still... - 12:50 PM feature request #8677: Add distribution aggregation to set subtree menu
- >use message() for enumeration labels
This seems not yet to be used by "Aggregation mode". I move this to follow u... - 12:45 PM feature request #8805 (Closed): In distribution editor synoms should be available as concatenated String
- Works and ticket can be closed. Maybe in future we can also include ppSyns and MAN and maybe there is even the possib...
- 10:48 AM feature request #8805 (Resolved): In distribution editor synoms should be available as concatenated String
- 12:21 PM Revision e756cd24 (cdmlib): ref #8815 adapt return type for uuidAndTitleCache method in taxonNodeService
- 12:17 PM bug #8736 (Closed): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
- 12:12 PM bug #8736 (Feedback): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
- I guess this can be closed in 5.12 as there is a follow up ticket in 5.13?
- 11:45 AM Revision 5bb4d1e3 (cdmlib): preliminary ignore DistributionAggregationTest
- 11:24 AM feature request #6676 (Duplicate): A user with READ access to taxa but WRITE access to factual data cannot update the factual view via the name editor
- Katja Luther wrote:
> I think this is fixed with #8810, @AK is this right?
Exactly.
- 11:07 AM feature request #6676 (Resolved): A user with READ access to taxa but WRITE access to factual data cannot update the factual view via the name editor
- I think this is fixed with #8810, @AK is this right?
- 11:23 AM bug #8816 (Worksforme): NoSuchElementException during adding Specimens to Matrix Editor
- Exception during adding Specimens to Matrix Editor
Server side:
~~~
[caryophyllales_spp] 11:42:48,590 INFO [Th... - 11:20 AM Revision f24b885c (cdmlib): cleanup
- 11:20 AM bug #6585 (Rejected): Combo menu items have orange font
- I cant reproduce this.
This depends for sure on the linux desktop theme that Patrick was using in this case. Since h... - 11:05 AM bug #6585 (Feedback): Combo menu items have orange font
- 11:04 AM bug #6585: Combo menu items have orange font
- on windows I can't reproduce this issue, @AK, could you please have a look on linux?
- 11:19 AM Revision 7de0210e (cdmlib): preliminary ignore StructuredDescriptionAggregationTest
- 11:19 AM Revision df326698 (cdmlib): cleanup
- 11:15 AM Revision b4188660 (taxeditor): ref #8805 fix potential NPE
- 11:09 AM bug #8810 (Closed): In taxeditor parts without permissions should be disabled
- 11:02 AM bug #6036: Problems with deleting type names
- to have look if this is still an open issue set to Highest.
- 11:01 AM Revision f59c3f4b (cdmlib): ref #8805 cleanup TaxonDistributionDTO and simplify concatenateSynonyms method
- 10:59 AM feature request #7981: Add configuration UI for matrix description aggregation
- Move this to 5.13
- 10:48 AM feature request #8749: Add proposalProvider to AbstractComboElement
- check which parts are already solved and which still open, therefore move to 5.13 but maybe create a new ticket and m...
- 10:37 AM bug #8645 (Closed): rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
- fixed
- 10:36 AM Revision 2638cb89 (taxeditor): avoid NPE when polling for progressmonitor
- 10:08 AM Revision d59d32c3 (taxeditor): avoid NPE when polling for progressmonitor
- 09:47 AM Revision 47c1bab5 (cdmlib): ref #8815: add UuidAndTitleCache methods again in taxonnodeservice - continue
01/18/2020
- 04:22 PM Revision 4e41b80c (cdmlib-apps): ref #2826 handle verbatim years better
- 04:21 PM Revision a9047fed (cdmlib-apps): ref #2826 handle ined. authors
- 04:20 PM Revision 8fb964f0 (cdmlib-apps): ref #2826 cleanup
- 12:19 PM Revision deed567d (cdmlib-apps): ref #2826 remove not needed cdmTargetClass
- 11:45 AM Revision bb5bac58 (cdmlib-apps): minor, cleanup
01/17/2020
- 09:21 PM feature request #8706: taxeditor error report with timestamps
- ready for review
- 09:21 PM feature request #8706 (Resolved): taxeditor error report with timestamps
- Applied in changeset commit:taxeditor|6e1d17962e4f23d254da242b13a7e188d69793ca.
- 03:13 PM feature request #8706 (In Progress): taxeditor error report with timestamps
- 09:21 PM Revision 6e1d1796 (taxeditor): fix #8706 error messages with remonte request time stamps
- 09:20 PM Revision 30acb146 (cdmlib): ref #8706 DateHeaderFilter to add Date headers to all servelet responses
- 08:25 PM Revision 046b8cfb (cdmlib): cleanup
- 03:33 PM Revision a6cc90d1 (taxeditor): ref #8706 reporting error time in messages
- 12:09 PM task #8813 (In Progress): Zen theme base font with better redability
- 12:08 PM task #8813: Zen theme base font with better redability
- Dann gehen wir das nach dem Release an:
1. Umstellen des Portals auf größere Schrift und etwas größeren Zeilena... - 12:08 PM task #8813: Zen theme base font with better redability
- Hallo Andreas,
danke! Ja, finde ich eine gute Idee, das breiter abzustimmen.
Schöne Grüße,
Norbert - 11:29 AM task #8813 (Feedback): Zen theme base font with better redability
- Hier nochmal die alte (Droid Sans) und neue Schrift (DejaVu Sans) im Vergleich:
: Zen theme base font with better redability
- Hallo Norbert,
Bei den Cichorien hatten wir die Verdana eingestellt, diese steht aber nur auf Windowssystemen... - 08:35 AM task #8813 (Duplicate): Zen theme base font with better redability
- Hallo Andreas,
denkst Du noch daran, wenn Du die Zeit findest, dem Cichorieae-Portal wieder seinen ursprüngli... - 09:42 AM Revision 99a988e9 (taxeditor): ref #8805: fix synonym filter
- 09:26 AM Revision 75e3aef5 (cdmlib): ref #8815: add UuidAndTitleCache methods again in taxonnodeservice
- 09:22 AM bug #8815 (Closed): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- In TaxonNodeService and Dao the usage of TaxonNodeDtp and UuidAndTitleCache duplicates some functionality. This shoul...
- 09:08 AM bug #8814: Clean implementation for permissions with combination of Taxonnode and other permissions
- Please always add "related issues" to follow up tickets not only in ticket description. This way it is linked bedirec...
- 08:49 AM bug #8814 (New): Clean implementation for permissions with combination of Taxonnode and other permissions
- this is a follow up ticket for #8810.
With the actual implementation it is not possible to decide with one call wh...
01/16/2020
- 05:11 PM bug #8810 (Feedback): In taxeditor parts without permissions should be disabled
- 03:20 PM bug #8810: In taxeditor parts without permissions should be disabled
- this temporary solution works as expected, but we will need a more complete solution.
This ticket can be closed on... - 01:53 PM bug #8810 (Resolved): In taxeditor parts without permissions should be disabled
- 12:02 PM bug #8810 (Closed): In taxeditor parts without permissions should be disabled
- The user should not be able to edit entities, he/she does not have the permissions for. When checking the permission ...
- 05:09 PM feature request #8805 (Feedback): In distribution editor synoms should be available as concatenated String
- For me no synonyms are shown in the column. I tested on rem_conf_am with classification "Testklass". At least taxon N...
- 02:13 PM feature request #8805 (Resolved): In distribution editor synoms should be available as concatenated String
- Applied in changeset commit:taxeditor|77172e4955db32cfa9193fbbb03ec81aa7851734.
- 05:08 PM Revision a64ae084 (cdm-dataportal): ref #6878 switching to DejaVu sans
- 04:28 PM Revision a2b8e113 (cdm-dataportal): using default font in all page elements
- 03:52 PM bug #8812 (Resolved): Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access HTTP invoker remote service at ...)
- A couple of situations exist in which users report problems due to RemoteAccessExceptions ("Could not access HTTP inv...
- 02:12 PM Revision 5915e0b2 (cdmlib): ref #8805: add synonyms to dto for distribution editor
- 02:11 PM Revision 77172e49 (taxeditor): fix #8805: add synonym column to distribution editor
- 02:01 PM feature request #8749: Add proposalProvider to AbstractComboElement
- should we split the ticket and move open issue to 5.13. At least partly it works as far as I remember from vocabulary...
- 01:58 PM feature request #8749 (In Progress): Add proposalProvider to AbstractComboElement
- need to have a look at this topic again
- 02:00 PM feature request #6760 (Worksforme): specimen import configuration
- I don't what this means exactly. When importing e.g DNA samples of already existing specimen, this is correctly attac...
- 01:54 PM bug #8745 (Closed): Type designations of synonyms missing on specimen page
- This is fixed!
- 01:42 PM bug #8745 (Resolved): Type designations of synonyms missing on specimen page
- 01:48 PM feature request #8299 (Closed): add typification column to scientific name and homotypical group in cdm light
- 01:38 PM feature request #8299: add typification column to scientific name and homotypical group in cdm light
- I don't think we should move this. It was probably fixed in 5.12
- 01:35 PM bug #8645 (Resolved): rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
- Applied in changeset commit:taxeditor|8e6b3b25d268778b6fd3e90a28fe1c3fa9a62e3b.
- 01:35 PM Revision 8e6b3b25 (taxeditor): fix #8645: rename OWL Export menu item
- 01:33 PM bug #8780 (Closed): Repair sortindex does not work on TermTree index
- seems to work, now.
- 01:10 PM bug #8790 (In Progress): Update measurement units for existing quantitative data missing a unit
- 01:08 PM task #8672: Source handling during (distribution) aggregation
- This might be partly implemented in 5.12 already. If fully fixed revert milestone to 5.12
- 01:05 PM feature request #8677 (Resolved): Add distribution aggregation to set subtree menu
- Moved open issues to #8811
Review needed for **this** ticket. - 01:04 PM task #8811 (New): Open issues for "Add distribution aggregation to set subtree menu"
- copied from #8677
* disable rank fields in case aggregation should run only on the 1 selected taxon (and not on s... - 12:55 PM bug #8788 (Feedback): Cloned descriptions do not show up in dataportal anymore
- Is this still an open issue? I somehow remember that you have worked on it at the beginning of the year.
- 12:23 PM feature request #6812: Improve TaxEditor download site
- Issues open here?
- 12:19 PM bug #8809 (Closed): CdmLight Export area without level results in NPE
- 11:29 AM bug #8809 (Resolved): CdmLight Export area without level results in NPE
- Applied in changeset commit:cdmlib|5996b524f4493fa800a843769a45061f497e4b1a.
- 11:27 AM bug #8809 (Closed): CdmLight Export area without level results in NPE
- Areas without a level throwing a NPE.
- 12:06 PM Revision fe9e440d (taxeditor): ref #8810: check for taxonnode permission and whether the user has taxon node granted authorities
- 11:33 AM bug #8737 (Closed): delete taxon included in two classifications deletes taxonname
- this works now as expected
- 11:29 AM task #8130: Check if related feature data is cleared when supported facts type is changed
- I guess this is not yet fixed.
- 11:29 AM Revision 5996b524 (cdmlib): fix #8809: fix NPE for areas without level
- 11:24 AM bug #8808 (Closed): Cdm-Light Export fix name identifier export
- I won't review as it takes too much time. I guess feedback from WGB should be enough.
- 11:19 AM bug #8808 (Resolved): Cdm-Light Export fix name identifier export
- 11:17 AM bug #8808 (Closed): Cdm-Light Export fix name identifier export
- mail WB:
Hallo Katja,
noch eine Frage zum (derzeitigen) CDM-light output: Kann es sein, dass in die NameIdentifie... - 11:23 AM EDIT Platform Etablierung task #8722 (Closed): Provide Manuals and Dokumentation for the Kurs „Integrated Taxonomy“ WiSe 2019/20
- 11:23 AM EDIT Platform Etablierung task #8727 (Closed): Test Workshop workflow
- 11:22 AM EDIT Platform Etablierung task #8704 (Closed): Test specimen import via BioCase and write documentation
- 11:20 AM feature request #8759 (Resolved): Description aggregation : suppress state present when more details are available
- please review
- 11:20 AM Revision 834f548a (cdm-dataportal): ref #8759 conditionally supressing state 'present' in description string representations
- 11:00 AM Revision 358e0b7f (cdm-dataportal): ref #8759 conditionally supressing state 'present' in description table
- 10:59 AM Revision dfd71699 (cdm-dataportal): ref #8807 adaptive headers in description table - changing array indexes
- 10:14 AM bug #8797 (Closed): Navigator tree collapse after moving taxon node
- This works as expected now.
- 10:12 AM feature request #8807 (Closed): description page: Adapt table header to the nature of description elements
- 10:12 AM feature request #8807 (Resolved): description page: Adapt table header to the nature of description elements
- Applied in changeset commit:cdm-dataportal|0e414cc1ad6b178dd09a57eed2bd47d25d07677a.
- 09:48 AM feature request #8807 (Closed): description page: Adapt table header to the nature of description elements
ich sehe gerade, dass die Tabelle die Überschrift „States“ hat in der 2. Spalte. Das ist nicht ganz richtig, da d...- 10:12 AM Revision 0e414cc1 (cdm-dataportal): fix #8807 adaptive headers in description table
- 09:59 AM bug #8806: Multiple representations problem on saving Desriptive Data Set
- If this is reproducable it should be fixed soon.
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