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From 11/06/2016 to 12/05/2016

12/05/2016

08:57 PM bug #6077: Import of gathering images
Can you please add a changeset Andreas Müller
08:49 PM bug #6210: Null values for boolean fields are causing PropertyAccessException
Remove target version as it was a temporary issue and belongs to #5974 Andreas Müller
04:23 PM Revision 53770a14 (cdm-server): Merge branch 'release/4.4.0' into develop
jenkins
04:23 PM Revision 275059fe (cdm-server): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
04:22 PM Revision 2607a3ca (cdm-webapp): Merge branch 'release/4.4.0' into develop
jenkins
04:22 PM Revision 2c19906c (cdm-webapp): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
04:22 PM Revision bdbeddcc (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.4.0
jenkins
04:21 PM Revision 268feda7 (cdm-vaadin): Merge branch 'release/4.4.0' into develop
jenkins
04:21 PM Revision 884a8f88 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
04:19 PM Revision 069047f4 (cdm-vaadin): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
04:19 PM Revision 6a822201 (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0
jenkins
04:19 PM Revision e5ff56fb (cdm-dataportal): Merge branch 'release/4.4.0' into develop
jenkins
04:19 PM Revision a61b2502 (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
04:19 PM Revision 5aae0c96 (cdm-dataportal): updating poms for branch'release/4.4.0' with non-snapshot ver...
jenkins
04:19 PM Revision 8a4cface (cdm-dataportal): release-preparation: production level css
jenkins
04:19 PM Revision 47596c87 (taxeditor): Merge branch 'release/4.4.0' into develop
jenkins
04:19 PM Revision d2f3794a (taxeditor): Merge branch 'release/4.4.0'
jenkins
04:18 PM Revision 30ae7ce0 (cdmlib): Updating develop poms back to pre merge state
jenkins
04:18 PM Revision 714c6783 (cdmlib): Merge branch 'master' into develop
jenkins
04:18 PM Revision d77482d2 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
04:17 PM Revision a31759ed (cdmlib): Merge branch 'release/4.4.0'
jenkins
03:58 PM Revision 5009750d (cdmlib): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
03:55 PM bug #6241: fix java doc problems in projects
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > A solution might be to replace all "* @date " by "* @since "
...
Andreas Müller
03:50 PM bug #6241: fix java doc problems in projects
Andreas Müller wrote:
> A solution might be to replace all "* @date " by "* @since "
The doc says the since text ...
Andreas Kohlbecker
03:44 PM bug #6241: fix java doc problems in projects
A solution might be to replace all "* @date " by "* @since " Andreas Müller
12:49 PM bug #6241 (Feedback): fix java doc problems in projects
javadoc problems exist in the following projects and should be fixed (see also #6240 this is not a duplicate!). The r... Andreas Kohlbecker
03:50 PM Revision 8aab0fb1 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.4.0-SN...
jenkins
03:50 PM Revision 7a7041f2 (cdm-webapp): updating poms for 4.5.0-SNAPSHOT development
jenkins
03:50 PM Revision bce9439d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.5.0-SN...
jenkins
03:50 PM Revision a25a0a15 (taxeditor): Updated version in pom / project files to taxeditor version : 4.5....
jenkins
03:50 PM Revision 2b99aa56 (taxeditor): Updated version in pom / project files to taxeditor version : 4.4....
jenkins
03:49 PM Revision b663adda (cdm-server): updating poms for 4.5.0-SNAPSHOT development
jenkins
03:47 PM Revision f4df4599 (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0-SNAPSHOT
jenkins
03:47 PM Revision b3650bfd (cdm-vaadin): updating poms for 4.5.0-SNAPSHOT development
jenkins
03:47 PM Revision 9db9e4e4 (cdm-vaadin): jenkins bumping cdmlib.version to 4.5.0-SNAPSHOT
jenkins
03:45 PM Revision a356e4a1 (cdmlib): updating poms for 4.5.0-SNAPSHOT development
jenkins
03:10 PM Revision b139097d (cdm-vaadin): fix #6240 disabling doclint in javadoc for jdk.8
Andreas Kohlbecker
03:08 PM bug #6194 (Duplicate): can't enter a new reference from feature data (Faktendaten)
this is a duplicate for #6178 Katja Luther
02:55 PM Revision 503d9f4c (cdmlib): fix SortIndexUpdater bug for missing @id replacement
Andreas Müller
01:59 PM Revision 080a18fc (cdmlib): fix SortIndexUpdater bug for missing @id replacement
Andreas Müller
01:39 PM Revision 00ad9218 (taxeditor): Merge branch 'release/4.4.0' into develop
jenkins
01:39 PM Revision f9e66bad (taxeditor): Merge branch 'release/4.4.0'
jenkins
01:19 PM Revision ac8a3308 (cdm-webapp): Merge branch 'release/4.4.0' into develop
jenkins
01:19 PM Revision 5a6e0b6b (cdm-webapp): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
01:19 PM Revision 1f011efd (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.4.0
jenkins
01:18 PM Revision 4bb89689 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
01:17 PM Revision 2ce35ad5 (cdm-vaadin): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
01:17 PM Revision 3870a9a1 (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0
jenkins
01:16 PM bug #6240 (Resolved): maven javadoc plugin fails with java 1.8
Applied in changeset commit:cdm-vaadin|31adf9f4302833188ad46a6a325120ae62ad05cb. Andreas Kohlbecker
12:47 PM bug #6240 (Closed): maven javadoc plugin fails with java 1.8
the maven javadoc plugin fails with java 1.8
this occurred firstly in the cdm-vaadin-RLS-FINISH jenkins job an was...
Andreas Kohlbecker
01:16 PM Revision 31adf9f4 (cdm-vaadin): fix #6240 disabling doclint in javadoc for jdk.8
Andreas Kohlbecker
01:02 PM bug #3226: openlayers map google baselayers: api keys rejected
Probably I'm too stupid.
I'm at the test portal, entered the google api key. I selected one of the google maps, bu...
Gabriele Dröge
11:59 AM Revision 61c55463 (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0
jenkins
11:26 AM Revision 54aa3c87 (cdmlib): Updating develop poms back to pre merge state
jenkins
11:26 AM Revision ef898886 (cdmlib): Merge branch 'master' into develop
jenkins
11:26 AM Revision f337bbf0 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
11:26 AM Revision 1fdbd7a6 (cdmlib): Merge branch 'release/4.4.0'
jenkins
11:13 AM Revision ba9894a5 (cdmlib-apps): update cdmlib-apps pom version
Andreas Müller
11:10 AM Revision eca94139 (cdmlib): updating poms for branch'release/4.4.0' with non-snapshot versions
jenkins
10:55 AM Revision 8c81c048 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.4.0-SN...
jenkins
10:55 AM Revision 1ca4fce0 (cdm-webapp): updating poms for 4.5.0-SNAPSHOT development
jenkins
10:55 AM Revision 7ab9105e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.5.0-SN...
jenkins
10:55 AM Revision 7cde2526 (taxeditor): Updated version in pom / project files to taxeditor version : 4.5....
jenkins
10:55 AM Revision 7bb0ef81 (taxeditor): Updated version in pom / project files to taxeditor version : 4.4....
jenkins
10:54 AM Revision c4b9aa67 (cdm-dataportal): updating poms for 4.5.0-SNAPSHOT development
jenkins
10:52 AM Revision 71d200df (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0-SNAPSHOT
jenkins
10:52 AM Revision 8d35ca12 (cdm-vaadin): updating poms for 4.5.0-SNAPSHOT development
jenkins
10:52 AM Revision b1daf2bc (cdm-vaadin): jenkins bumping cdmlib.version to 4.5.0-SNAPSHOT
jenkins
10:50 AM Revision 628e5804 (cdmlib): updating poms for 4.5.0-SNAPSHOT development
jenkins
10:42 AM bug #6218 (Resolved): NPE when editing term vocabulary label
Applied in changeset commit:taxeditor|d57cedd1bd3ee417373720f6e40036c13d79a5e4. Katja Luther
10:42 AM Revision d57cedd1 (taxeditor): fix #6218: avoid NPE when remove text from label field
Katja Luther
10:33 AM bug #6072: Implement getTaxonomicGroups for Edaphobase
includeEntity=true should now be fixed Andreas Müller
09:48 AM feature request #4594: RL Webservice 7: Return taxa by Identifier
Missing includeEntity is fixed. I think we can close this ticket. If there are further open issues we may open anothe... Andreas Müller
09:43 AM feature request #4594 (Resolved): RL Webservice 7: Return taxa by Identifier
Applied in changeset commit:cdmlib|8acdc0b7d98692ee721bf18cb23fa24b2de8b001. Andreas Müller
09:43 AM Revision 8acdc0b7 (cdmlib): fix #4594 fix includeEntity issue for findByMarker and findByIdentifi...
Andreas Müller
09:06 AM feature request #6238 (Resolved): add name of sec reference to display of concept relations in po...
Hi Gabi,
I enabled the sec reference display in your portal for the whole synonymy. The according settings are fou...
Andreas Kohlbecker
09:06 AM feature request #6239 (New): Optional header for taxon concept section in synbbnonymy
copied from #6238
Add a header before the concept relation part e.g. "Concept relations"
Example: http://da...
Andreas Kohlbecker
08:13 AM task #6135 (Resolved): Remove authors from Taxonomische Großgruppe
Applied in changeset commit:cdmlib|077e258beb50580d0a341c21a13f61927aad88e7. Andreas Müller
08:11 AM Revision 077e258b (cdmlib): fix #6135 allow nameCache for merked taxa search
Andreas Müller

12/03/2016

03:38 PM feature request #6238 (Resolved): add name of sec reference to display of concept relations in po...
1. Name of sec reference/referenced classification is not displayed for concept relations
2. Add a header before the...
Gabriele Dröge

12/02/2016

11:08 PM Revision 7f0410e9 (cdmlib): cleanup
Andreas Müller
10:12 PM bug #6236 (Resolved): Add alphabetic length ordering in name search
Applied in changeset commit:cdmlib|57ef2f9d9b15136e86c3ef0ceb53fe0c70791303. Andreas Müller
10:13 AM bug #6236 (Closed): Add alphabetic length ordering in name search
Wir wollen immer nur die ersten 10 Treffer in einer Combobox anzeigen. Dafür wäre eine längenlexiographische Sortieru... Andreas Müller
10:12 PM Revision 57ef2f9d (cdmlib): fix #6236 add alphabetic length ordering to name search
Andreas Müller
04:49 PM Revision 39811603 (cdmlib): ref #6128 fix null value bug for includeAuthorship
Andreas Müller
04:31 PM feature request #6134 (Resolved): Allow grouping by Taxonomische Großgruppe
Applied in changeset commit:cdmlib|e3fc5af3c712b705d2c5b4ee36b9334cedd1e710. Andreas Müller
04:31 PM Revision e3fc5af3 (cdmlib): fix #6134 add group taxa by marker and refactor treeindex handling
Andreas Müller
04:27 PM Revision 9c4f03a5 (cdmlib): Cleanup
Andreas Müller
04:07 PM feature request #5956 (Resolved): Improve functionality and UX for (children display in) breadcru...
all issues solved except the transparency which needs to be discussed.
I am not sure if the caveats mentioned in...
Andreas Kohlbecker
04:01 PM Revision e03a7102 (cdm-dataportal): ref #5956 classification breadcrumb navigation for mobiles fixed
Andreas Kohlbecker
03:42 PM Revision 53c705d4 (cdm-dataportal): ref #5956 improving classification breadcrumb navigation
- avoiding boxes that are not being closed on mouse out third part Andreas Kohlbecker
03:20 PM bug #6237 (New): Make TreeIndex a hibernate user type
see eu.etaxonomy.cdm.model.common.TreeIndex Andreas Müller
02:36 PM Revision 583ec5f9 (cdm-webapp): updating maven wagin extensions to 2.10
Andreas Kohlbecker
02:08 PM Revision 274ff13f (cdm-dataportal): ref #5956 improving classification breadcrumb navigation
- avoiding boxes that are not being closed on mouse out second part
- fixing loading animation
Andreas Kohlbecker
01:48 PM Revision 52221e05 (cdmlib): fix failing test
Katja Luther
10:42 AM Revision 69fb3dbb (cdm-dataportal): ref #5956 improving classification breadcrumb nav
- avoiding boxes that are not being closed on mouse out
- more consistent UI by adding ... as trigger for the last ...
Andreas Kohlbecker
10:16 AM feature request #6128 (Resolved): Include authorship in taxon search web service
Applied in changeset commit:cdmlib|05c87b7501b0737b129f4fb5769b56b4c135009c. Andreas Müller
10:11 AM Revision 05c87b75 (cdmlib): fix #6128 include authorship option in taxon and name search
Andreas Müller
10:04 AM Revision f08f6894 (cdmlib): Cleanup and replace int by long in count
Andreas Müller
08:33 AM bug #6235 (Rejected): page duplication when accessing resticted content
This is not a problem in the code. The observed effect was caused by pending updates for the cdm_dataportal module an... Andreas Kohlbecker

12/01/2016

12:53 AM Revision cbae39d4 (cdmlib): fix #6132 first implementation of parent taxon in TaxonInContextDTO
Andreas Müller
05:42 PM bug #6235 (Rejected): page duplication when accessing resticted content
At least in the flora-cuba portal there is strange effect when accessing a taxon page without sufficient permissions.... Andreas Kohlbecker
04:57 PM feature request #6110: Use https for map service calls when the portal is access via https
cannot test until the test portals are running under https Andreas Kohlbecker
04:54 PM bug #6114 (Closed): Regression of #4379: Citations only consist of footnotes if bibliography bloc...
Andreas Kohlbecker
04:51 PM task #6003 (Closed): Cleanup redmine users
Andreas Kohlbecker
04:50 PM bug #4965 (Closed): unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUp...
Andreas Kohlbecker
04:38 PM bug #6234 (New): Unavailable server creates infinite exception loop
while the server was down I got a infinite loop of exception dialogs. Pressing OK created a new dialog.
~~~
org.s...
Andreas Müller
04:34 PM bug #6220: Improve definition of orphaned taxon and synonym
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > The open in works correctly now. The wro...
Andreas Müller
04:28 PM feature request #6058 (Closed): Store NamedArea dialog filters more individually
Andreas Müller
04:28 PM feature request #6058: Store NamedArea dialog filters more individually
Open issues moved to new ticket #6233 Andreas Müller
04:26 PM bug #6233 (New): Open issues for individual dialog filters
Copied from #6058:
1) All Area lists like (geoscope in classification or PolytomousKey) seem to handle "Add" and "...
Andreas Müller
04:14 PM feature request #6232 (New): secure OAuth2 grant types 'implicit' or 'password' by TSL/SSL.
for details see #6118 Andreas Kohlbecker
04:13 PM task #6118 (Closed): evaluate spring-security-auth2 and spring-cloud-security as a framework for ...
Andreas Kohlbecker
04:02 PM Revision 5de23116 (taxeditor): fix #5971 fix NPE for not existing preference
Andreas Müller
04:01 PM feature request #5971: Implement database wide CdmPreference writing
If no CdmPreference exists yet for nomenclatural code an NPE is thrown:
~~~
login : admin
editor version : 4.4.0...
Andreas Müller
03:46 PM Revision 5e027f1f (taxeditor): cleanup
Andreas Müller
03:42 PM Revision e6d7607d (cdmlib): add getIdentifierType to IO Transformers
Andreas Müller
03:41 PM Revision 4106cf43 (cdmlib): Cleanup
Andreas Müller
03:38 PM Revision 26cb69af (taxeditor): ref #6199 Move "open in editor" option to the bottom
Patrick Plitzner
03:06 PM bug #6160 (Rejected): Add preservation method and stage as sub class to DefinedTerm
We have to refactor the preference classes to use TermType instead of the Term class -> close as rejected Patrick Plitzner
03:02 PM bug #5862 (Closed): Spring needs online resources during launch
Works now Patrick Plitzner
02:46 PM bug #6231 (Worksforme): Correctly handle failed term deletions in the editor
Deletion of MarkerType is prevented at the persistence level, but the MarkerType is deleted from the session in the e... Andreas Kohlbecker
02:43 PM bug #5104 (Closed): prevent MarkerTypes from being deleted when there are Marker entities using t...
Deletion is prevented at the persistence level, but the MarkerType is deleted from the session in the editor. That is... Andreas Kohlbecker
02:32 PM feature request #4866 (In Progress): Implement clone method for complete classifications
This is partly and only needs review and probably some improvements. Andreas Müller
02:31 PM feature request #4867 (In Progress): Add menu item for classification cloning
This is partly done and is an experimental feature currently. Andreas Müller
02:26 PM feature request #3994 (Closed): Select widget to choose the filter areas for the advanced search
Andreas Kohlbecker
02:18 PM Revision 07380839 (cdmlib): Revert "updating poms for 4.5.0-SNAPSHOT development"
This reverts commit 9ff0eb6731c1b854d6bea082b5bd87e001b202bd. Andreas Kohlbecker
01:31 PM Revision 7890f10b (cdmlib): reverting version to 4.4.0-SNAPSHOT
Andreas Kohlbecker
01:30 PM Revision 381b3519 (cdmlib): ref #2985 portal controller for named areas
Andreas Kohlbecker
01:20 PM Revision 9ff0eb67 (cdmlib): updating poms for 4.5.0-SNAPSHOT development
jenkins
01:07 PM bug #6230 (New): harmonize specimen page implementation and harmonize with drupal coding conventions
1. The specimen page implementation is not using the cdm node api, please harmonize. You can use the named_area page ... Andreas Kohlbecker
12:57 PM feature request #2985 (Resolved): Improve Specimen details display
Andreas M: please review Andreas Kohlbecker
12:56 PM Revision 30845bda (cdm-dataportal): ref #2985 implementing named area page to make area details l...
Andreas Kohlbecker
11:55 AM Revision d6c025ed (taxeditor): add missing files
Katja Luther
11:42 AM Revision 2f53d13b (cdmlib): ref #2985 fixing init strategy to add the gateringEvent.collectingAreas
Andreas Kohlbecker
09:29 AM Revision c21b0186 (cdmlib-apps): Merge branch 'master' into noChecklistClone
# Conflicts:
# app-import/src/main/java/eu/etaxonomy/cdm/io/redlist/gefaesspflanzen/RedListGefaesspflanzenImportFamil...
Patrick Plitzner
09:14 AM Revision d70c528d (taxeditor): avoid NPE when reusing taxonname for taxon creation
Katja Luther
09:09 AM Revision ccce957a (cdmlib-apps): ref #5448 Correctly set sec reference on synonyms and avoid for
misapplied names Patrick Plitzner

11/30/2016

06:41 PM Revision 4ce9478d (cdmlib): ref #2985 controller method to return extensions with type and solvin...
Andreas Kohlbecker
06:40 PM Revision 0820cdc0 (cdm-dataportal): ref #2985 output of extensions implemented generically and fo...
Andreas Kohlbecker
05:06 PM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
Before we close this there is one remaining issue:
Please move the "Open in Editor Check box down to the very bott...
Andreas Müller
05:03 PM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
The open issues are general multi-language editor issues handled in a new ticket #6228. Andreas Müller
12:58 PM bug #6229 (New): Implement multi-language support for MultiLanguage textes everywhere
Currently only a view multi-language attributes are really supported by the Editor. These are TextData.multilanguageT... Andreas Müller
11:58 AM bug #6228 (New): Fix behavior of multi-language editing
As realized in #6199 multi-language editing does not work correctly yet.
Adding >2 languages, deletes one of the old...
Andreas Müller
10:49 AM feature request #2985: Improve Specimen details display
Andreas Kohlbecker wrote:
> Hi Andreas M.
>
> the the original ticket you wrote:
>
> > additional areas should...
Andreas Müller
10:21 AM feature request #2985: Improve Specimen details display
Hi Andreas M.
the the original ticket you wrote:
> additional areas should be shown with the area level such as...
Andreas Kohlbecker
10:08 AM Revision d5520157 (cdmlib-apps): ref #5448 Import additional information as extension instead of
annotations Patrick Plitzner
10:08 AM Revision f600b948 (cdmlib-apps): ref #5448 Fix saving of imported families
Patrick Plitzner

11/29/2016

06:01 PM Revision 5a079dbf (cdm-dataportal): ref #2985 units in min max measures only at the end and after...
Andreas Kohlbecker
06:00 PM feature request #2985 (In Progress): Improve Specimen details display
Andreas Kohlbecker
05:42 PM Revision 17e693bd (cdmlib-apps): Avoid cloning taxa for checklist classification
Patrick Plitzner
05:17 PM bug #6227 (Closed): LIE during request to derivedUnitFacade/{uuid}/collectingareas
http://api.cybertaxonomy.org:80/flora_central_africa/derivedUnitFacade/70c3540a-fefb-4152-9dbf-aef1ae5ffff9/collectin... Andreas Kohlbecker
04:42 PM bug #3061 (Closed): Lecototype typeReference not rendered correctly
test are running successful and are thus confirming the expectations. Ticket fully solved Andreas Kohlbecker
04:41 PM bug #3061 (Resolved): Lecototype typeReference not rendered correctly
Andreas Kohlbecker
04:36 PM Revision 3a3d658d (cdm-dataportal): ref #3061 adapting test and test data
Andreas Kohlbecker
03:46 PM Revision c7f92453 (cdm-dataportal): ref #3061 using the full publication timePeriod instead of on...
Andreas Kohlbecker
03:30 PM Revision c5294246 (cdm-dataportal): ref #3061 fixing position of footnote
Andreas Kohlbecker
01:30 PM Revision 6fac16b9 (cdmlib-apps): Removed all occurrences of "checklist" related code
Patrick Plitzner
12:25 PM Revision b0269b24 (cdm-dataportal): ref #3061 removing cluetip js which is no longer used
Andreas Kohlbecker
11:33 AM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
I could only reproduce the strange behavior (TaxonNode excluded and unplaced flag not initialised) in one data source... Patrick Plitzner
11:28 AM Revision dbd15c7d (cdmlib-apps): Adapt SQL queries to filter for only Buttler approved taxa
Patrick Plitzner

11/28/2016

06:41 PM bug #5938 (Closed): distribution and specimen maps can not be used on the same page
Andreas Kohlbecker
01:39 PM bug #5938 (Resolved): distribution and specimen maps can not be used on the same page
Applied in changeset commit:cdm-dataportal|669f08ee073432d163976f10b59f1d516e71f827. Andreas Kohlbecker
01:23 PM bug #5938 (In Progress): distribution and specimen maps can not be used on the same page
Andreas Kohlbecker
06:38 PM feature request #3650 (Closed): allow supressing empty distribution and specimen maps
Andreas Kohlbecker
05:35 PM feature request #3650 (Resolved): allow supressing empty distribution and specimen maps
Applied in changeset commit:cdm-dataportal|378bc1ce4c8e704cde2fc41d11ab4f81b3b2275d. Andreas Kohlbecker
04:25 PM feature request #3650 (In Progress): allow supressing empty distribution and specimen maps
Andreas Kohlbecker
06:38 PM Revision e0613197 (cdm-dataportal): fix #3650 visibility of distribution and specimen maps config...
Andreas Kohlbecker
05:34 PM Revision 378bc1ce (cdm-dataportal): fix #3650 visibility of distribution and specimen maps config...
Andreas Kohlbecker
04:24 PM feature request #5047 (Duplicate): option to show empty distribution maps
Andreas Kohlbecker
01:40 PM task #6226: Delete orphaned key nodes
~~~ sql
SELECT *
FROM PolytomousKeyNode pkn
WHERE pkn.key_id NOT IN (SELECT id FROM PolytomousKey);
~~~
Andreas Müller
01:39 PM task #6226 (Closed): Delete orphaned key nodes
As deletion did not work correctly for long time we do still have PolytomousKeyNodes that do reference a PolytomousKe... Andreas Müller
01:39 PM Revision 669f08ee (cdm-dataportal): fix #5938 unique ids for each openlayers block elements
Andreas Kohlbecker
01:24 PM Revision 4c21ffdb (cdm-dataportal): ref #5938 fixing js lib loading order (and defined map contai...
Andreas Kohlbecker
01:23 PM feature request #6225 (New): Allow to freeze referencing objects view
Sometimes one wants to check some of the referencing objects by navigating to them without loosing the list. This is ... Andreas Müller
12:40 PM Revision 653e9c6b (cdm-dataportal): maps documentation, refactoring of unused params etc, unique ...
Andreas Kohlbecker
11:43 AM Revision f4675ec1 (cdm-dataportal): doc minor
Andreas Kohlbecker
10:31 AM feature request #5844 (Closed): Make stable identifier clickable in default specimen tab
Andreas Kohlbecker
10:30 AM feature request #5844 (Resolved): Make stable identifier clickable in default specimen tab
Applied in changeset commit:cdm-dataportal|a9ed34adc02e785439264eca051e15954bdeb72c. Andreas Kohlbecker
10:30 AM Revision a9ed34ad (cdm-dataportal): fix #5844 persistent stable identifier clickable
- clickable in specimen tab
- implementation harmonized in specimen table ref #5515
Andreas Kohlbecker
08:34 AM bug #6211 (Closed): massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
I agree! Andreas Kohlbecker

11/27/2016

10:42 AM bug #6211: massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
Both examples do now have < 1MB and load in reasonable time <= 5 sec. There still might be possibilities to improve t... Andreas Müller

11/25/2016

08:05 PM bug #6190: remove svn property place holder in first line of code
This can now be done automatically as model changes are fully merged into develop now. Andreas Müller
06:18 PM bug #6224 (Resolved): cdm-webapp is not using current version of cdmlib-remote-webapp.war
Applied in changeset commit:cdm-webapp|f55d498166acfa645e4f31af5869302f6acdb814. Andreas Kohlbecker
06:09 PM bug #6224 (In Progress): cdm-webapp is not using current version of cdmlib-remote-webapp.war
Andreas Kohlbecker
05:40 PM bug #6224 (Closed): cdm-webapp is not using current version of cdmlib-remote-webapp.war
After pushing a specific commit to the server and runing the build pipeline the resulting cdm-server is nor making u... Andreas Kohlbecker
06:15 PM Revision f55d4981 (cdm-webapp): fix #6224 swapping the war overlay order to avoid build pipeline ...
Andreas Kohlbecker
05:23 PM Revision 484bf7ea (cdmlib): ref #6211 cleanup old code
Andreas Müller
05:22 PM Revision 71b8be7f (cdmlib): cleanup
Andreas Müller
05:21 PM bug #6122 (Resolved): add titleCache service
Applied in changeset commit:cdmlib|b3a692b2ee3c7d7a5305a0b9901eaefcc87ca8f7. Andreas Müller
05:21 PM Revision b3a692b2 (cdmlib): fix #6122 use StringResultDTO for titleCache service
Andreas Müller
04:42 PM Revision 0245ae20 (cdmlib): doc
Andreas Müller
03:44 PM bug #6223 (New): change behaviour of AbstractBeanProcessor.excludes to asReference
With the excludes property the AbstractBeanProcessor provides a means to omit specific CDM-Bean properties from being... Andreas Kohlbecker
03:42 PM Revision be11c810 (cdmlib): cleanup
Andreas Müller
03:40 PM bug #6220: Improve definition of orphaned taxon and synonym
Andreas Müller wrote:
> Katja Luther wrote:
> > The open in works correctly now. The wrong symbol for taxa with con...
Katja Luther
03:35 PM bug #6220: Improve definition of orphaned taxon and synonym
Katja Luther wrote:
> The open in works correctly now. The wrong symbol for taxa with conceptrelationships/misapplie...
Andreas Müller
01:15 PM bug #6220: Improve definition of orphaned taxon and synonym
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > The fix works so far that search resul...
Katja Luther
12:01 PM bug #6220: Improve definition of orphaned taxon and synonym
Katja Luther wrote:
> Andreas Müller wrote:

> > Also orphaned synonyms are not found in TaxEditor taxon bulk edi...
Andreas Müller
11:55 AM bug #6220: Improve definition of orphaned taxon and synonym
Katja Luther wrote:
> Andreas Müller wrote:
> > The fix works so far that search result in TaxEditor allow only ope...
Andreas Müller
11:44 AM bug #6220: Improve definition of orphaned taxon and synonym
Andreas Müller wrote:
> The fix works so far that search result in TaxEditor allow only opening in TaxEditor now. Ho...
Katja Luther
03:37 PM task #6208 (Rejected): implement synonymy service responding with DTO
The fixes for #6211 improve the situation tremendously. Implementing a pure DTO may be a complex task therefore we re... Andreas Müller
03:25 PM bug #6201 (Closed): Adapt dataportal to the new synonym datamodel
I guess it is all ok. Andreas Müller
12:01 PM bug #6201 (Resolved): Adapt dataportal to the new synonym datamodel
ready for review if needed. Otherwise the synonymy is quite good covered by tests and can be considered to be ok sinc... Andreas Kohlbecker
03:08 PM feature request #6216 (Closed): Allow changing of defaultColor for PresenceAbsenceTerm
Looks good Andreas Müller
03:05 PM Revision 0ede0320 (cdmlib): ref #6211 avoiding to deep initialization of synonym groups
Andreas Kohlbecker
02:11 PM bug #6210 (Closed): Null values for boolean fields are causing PropertyAccessException
this is working now! Andreas Kohlbecker
01:48 PM bug #3226: openlayers map google baselayers: api keys rejected
Hi Gabi,
please can you do the review for this ticket? This it as brief how-to:
1. got to http://test.e-taxonom...
Andreas Kohlbecker
01:43 PM bug #3226 (Resolved): openlayers map google baselayers: api keys rejected
Applied in changeset commit:cdm-dataportal|2b83cc8b859c5bfa6ffb07ccc9c090f3031c6f1a. Andreas Kohlbecker
01:42 PM bug #3226 (In Progress): openlayers map google baselayers: api keys rejected
Andreas Kohlbecker
01:46 PM Revision f619ffbf (cdm-dataportal): openlayers maps cleaning up
Andreas Kohlbecker
01:43 PM bug #6211 (Resolved): massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
Applied in changeset commit:cdmlib|17b0c5e7b5ebc5dbe384f62928c3b394d5bb9ece. Andreas Müller
07:08 AM bug #6211: massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
Alternatively we may check if it is possible to adapt getSynonymsByHomotypicGroup() such that less data is initialized. Andreas Müller
06:39 AM bug #6211: massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
The reason for this problem is, that the TaxonPortalController calls the ITaxonService.getSynonymsByHomotypicGroup() ... Andreas Müller
01:42 PM Revision 2b83cc8b (cdm-dataportal): fix #3226 fixing broken Google map layers
Andreas Kohlbecker
01:39 PM Revision 11aa2415 (cdmlib): fix #6211 fix API incompatibility
Andreas Müller
01:08 PM Revision d11d4dd0 (cdmlib): cleanup
Andreas Müller
01:05 PM Revision 17b0c5e7 (cdmlib): fix #6211 reduce initialization for synonymy
Andreas Müller
12:59 PM Revision a6de10b5 (taxeditor): ref #6219: add warning that synonym is deleted immediately
Katja Luther
11:53 AM Revision f06c2616 (cdm-dataportal): ref #6222 adding ticket reference to comment
Andreas Kohlbecker
11:52 AM bug #6222 (New): harmonize classification service return types for the data portal
there is one service request which not yet returning TaxonNodeTDO object, this can cause problems in rare cases.
...
Andreas Kohlbecker
11:44 AM task #6221 (New): mention the unplaced and excluded states in the taxon page
Taxon nodes can be flagged with unplaced and excluded should this be mentioned in the portal page and how should it b... Andreas Kohlbecker
11:39 AM feature request #6203: Implement unplaced and excluded in dataportal
unplaced and excluded are handled correctly in the portal at least in the sense that the model change is not causing ... Andreas Kohlbecker
11:20 AM Revision a0e3ae5c (cdm-dataportal): ref #6203 checked return types of classification services and...
Andreas Kohlbecker
09:45 AM bug #6219: Deleting synonym is persisted immediately, but the editor is set dirty
I think it would be nice to implement it in a way similar to the bulkeditor, therefore we have to reconstruct the nam... Katja Luther
09:01 AM bug #6219: Deleting synonym is persisted immediately, but the editor is set dirty
The preferred solution is to handle it similar to bulk editor where the deletion from database is invoked only with s... Andreas Müller

11/24/2016

04:35 PM Revision 58525579 (cdmlib): ref #6211 try to fix heap consumption in synonymy service
Andreas Müller
04:31 PM Revision ed27e451 (cdmlib): minor
Andreas Müller
02:50 PM Revision ab94d85b (taxeditor): l10n for PresenceAbsenceTermDetailElement
Patrick Plitzner
02:33 PM feature request #6203: Implement unplaced and excluded in dataportal
Katja, could you have a look on this.
We definetely need to move the unplaced and excluded (in this order) taxa to...
Andreas Müller
02:27 PM Revision 3dbe4420 (taxeditor): Align label to the middle
Patrick Plitzner
02:27 PM Revision cb1498ea (taxeditor): ref #6216 Added button to select color instead of clicking on color
field
- resized color field
Patrick Plitzner
02:24 PM feature request #5616: Add the"Open in..." menu to taxon search
4b80789a fixed the "Open in ..." issue. However there are open questions related to orphaned taxa. See #6220. Andreas Müller
01:34 PM feature request #5616: Add the"Open in..." menu to taxon search
Katja Luther wrote:
> The problem seems to be in the calculation of the orphan value. A taxon is only orphaned when ...
Andreas Müller
02:21 PM bug #6220 (Feedback): Improve definition of orphaned taxon and synonym
The fix works so far that search result in TaxEditor allow only opening in TaxEditor now. However, an orphaned taxon ... Andreas Müller
01:35 PM bug #6220 (Resolved): Improve definition of orphaned taxon and synonym
Applied in changeset commit:cdmlib|4b80789a6d183956c922de22091164555d2ef442. Andreas Müller
01:32 PM bug #6220 (Feedback): Improve definition of orphaned taxon and synonym
Currently taxa are only orphaned if they have no taxon node AND no concept relationships. The later is critical as ta... Andreas Müller
01:44 PM Revision c6c4ab3a (cdmlib): ref #6220 javadoc
Andreas Müller
01:43 PM bug #4945 (Resolved): Right click menu for polytomous key node list view needs correct enabling
Katja Luther
01:42 PM bug #4945 (New): Right click menu for polytomous key node list view needs correct enabling
Katja Luther
01:42 PM bug #4945 (Resolved): Right click menu for polytomous key node list view needs correct enabling
Applied in changeset commit:taxeditor|f81dda1f2c57e7a51be26ab87b68bebda8d0fee4. Katja Luther
01:41 PM Revision f81dda1f (taxeditor): fix #4945: add propertytester for polytomouskeynode to enable menu...
Katja Luther
01:39 PM feature request #5971 (Resolved): Implement database wide CdmPreference writing
Applied in changeset commit:taxeditor|bb920fa17ba6147e45ad67cc651c703584cdcbd6. Katja Luther
01:39 PM Revision bb920fa1 (taxeditor): fix #5971: move admin menu in front of Help
Katja Luther
01:33 PM Revision 4b80789a (cdmlib): fix #6220 Improve isOrphaned definition for Taxon.
Andreas Müller
01:18 PM bug #6219 (Closed): Deleting synonym is persisted immediately, but the editor is set dirty
When deleting a synonym in name editor the deletion is persisted immediately. The editor is set dirty that looks like... Katja Luther
12:37 PM bug #5693 (Closed): Deleting a synonym only deletes the synonym relation
This seems to be fixed also after model changes (removed synonym relationship class). However there are issues about ... Andreas Müller
12:23 PM feature request #6198 (Closed): Remove synonym relationships in TaxEditor
Andreas Müller
12:18 PM Revision 0908acf3 (taxeditor): Adapt labels for taxon node agent relation editing
Andreas Müller
12:03 PM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
Patrick Plitzner wrote:
> Patrick Plitzner wrote:
> > While reviewing I saw that even the isExcluded is not persist...
Andreas Müller
12:00 PM Revision f83def50 (cdmlib): ref #6199 test for reading excluded, unplaced and excludedNote
Andreas Müller
11:16 AM bug #6218 (Closed): NPE when editing term vocabulary label
When trying to edit the label of a new vocabulary (PresenceAbsenceTerm) I got the below NPE.
I think it happened wh...
Andreas Müller
11:08 AM bug #6217: Adapt colour mapping in dataportals
Projects that might want to use the feature are Caucasus and Asteracea which do have or plan to have multiple data po... Andreas Müller
11:06 AM bug #6217 (New): Adapt colour mapping in dataportals
Currently there is the possibility to adapt the color of a PresenceAbsenceTerm in a distribution map by using the acc... Andreas Müller
10:58 AM feature request #6216 (Feedback): Allow changing of defaultColor for PresenceAbsenceTerm
Works well and ticket can be closed. Only issues might be layout issues:
1. Personally I find it better to have a ...
Andreas Müller
10:23 AM feature request #6216 (Resolved): Allow changing of defaultColor for PresenceAbsenceTerm
Applied in changeset commit:taxeditor|cf4bd11fd2a394c795f744111f8b2cbf7f59f7e5. Patrick Plitzner
10:21 AM feature request #6216 (Closed): Allow changing of defaultColor for PresenceAbsenceTerm
Patrick Plitzner
10:25 AM Revision 15f5a1bd (taxeditor): ref #6216 Pre-select color in ColorDialog
Patrick Plitzner
10:24 AM Revision 20718782 (cdmlib-apps): ref #3934 update Salvador import for facts
Andreas Müller
10:22 AM Revision cf4bd11f (taxeditor): fix #6216 Implement color dialog to change color of presence absence
terms Patrick Plitzner
09:52 AM Revision 033aad78 (taxeditor): all polytomouskey related handler are now extended from RemotingCd...
Katja Luther

11/23/2016

05:01 PM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
Patrick Plitzner wrote:
> While reviewing I saw that even the isExcluded is not persisted anymore. Have to recheck i...
Patrick Plitzner
04:19 PM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
While reviewing I saw that even the isExcluded is not persisted anymore. Have to recheck if anything has changed Patrick Plitzner
04:11 PM bug #6211: massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
This seems to be caused by a cycle in the object graph which is either not detected or not handled correctly by json-... Andreas Kohlbecker
03:54 PM bug #6210: Null values for boolean fields are causing PropertyAccessException
This is still occurring for me:
* database restored from dump: cdm_integration_cichorieae_2016-11-10_06h25m.Thursd...
Andreas Kohlbecker
02:11 PM bug #6210 (Resolved): Null values for boolean fields are causing PropertyAccessException
Fixed with f3d4c9bc Andreas Müller
03:45 PM bug #6206 (Closed): Vaadin view fail with: Failed to load the bootstrap javascript
Vaadin works on the test server. Seems fine. Patrick Plitzner
03:04 PM feature request #5841 (Resolved): Creating a new alternative in PolytomousKey Editor should set f...
Applied in changeset commit:taxeditor|efd30f4b550d4e53206d2c5d5a720381a5663611. Katja Luther
03:04 PM Revision efd30f4b (taxeditor): fix #5841: set selection to newly created keynode
Katja Luther
02:55 PM bug #6215 (Resolved): NPE when opening preferences with no DB connection
Applied in changeset commit:taxeditor|84ab8cb061709145c824967aa8a3a10742e875ff. Katja Luther
02:38 PM bug #6215 (Closed): NPE when opening preferences with no DB connection
When trying to open the preferences for all "Taxonomic Editor"-"Taxonomic" submenus an NPE is thrown.
~~~
l...
Andreas Müller
02:54 PM Revision 84ab8cb0 (taxeditor): fix #6215: check for datasource when opening preferencepage
Katja Luther
02:41 PM feature request #5971 (Feedback): Implement database wide CdmPreference writing
Andreas Müller
02:41 PM feature request #5971: Implement database wide CdmPreference writing
Please move the new menu in between Extras/Window and Help. Help should always be the last in the row. Andreas Müller
10:26 AM feature request #5971 (Resolved): Implement database wide CdmPreference writing
Applied in changeset commit:taxeditor|0bd095d9fbccd25ce847af780892633284b314f9. Katja Luther
09:29 AM feature request #5971: Implement database wide CdmPreference writing
Now we have a main menu admin. This menu should only be visible for admins or project manager. Katja Luther
02:27 PM feature request #5969 (Closed): Implement CdmPreference reading for database preferences
I think we can close this ticket now. Open issues will be checked in #5971 and are more related to writing then reading Andreas Müller
02:11 PM feature request #6203: Implement unplaced and excluded in dataportal
> Unplaced taxon nodes should be put to an incertis sedis node in the tree. Excluded nodes should be put to an exclud... Andreas Kohlbecker
01:20 PM Revision f3d4c9bc (cdmlib): Fix proparte is null in update script
Andreas Müller
01:19 PM Revision c1bd6833 (cdmlib): cleanup
Andreas Müller
11:15 AM bug #6214 (Closed): Add project specific preferences to CdmPreference menu
For now we have two project specific preferences: RedList (EditorProfile->Rote Liste 2020) and Campanula (Specimens a... Patrick Plitzner
10:33 AM bug #6105 (Resolved): Make CdmPreferences editable in separate view
Katja Luther
10:32 AM bug #6105: Make CdmPreferences editable in separate view
This is done, see #5971 Katja Luther
10:22 AM Revision 0bd095d9 (taxeditor): fix #5971: admin menu is visible only if connected and user has ro...
Katja Luther

11/22/2016

05:32 PM Revision 48e61436 (cdmlib): fix sortindex updater and SynonymDeduplicator
Andreas Müller
10:18 AM bug #6206: Vaadin view fail with: Failed to load the bootstrap javascript
Please review Andreas Kohlbecker
10:03 AM bug #6206 (Resolved): Vaadin view fail with: Failed to load the bootstrap javascript
Applied in changeset commit:cdm-vaadin|a45e5ee72e1bc48fec16b156617c746266e1ccb4. Andreas Kohlbecker
09:32 AM bug #6206: Vaadin view fail with: Failed to load the bootstrap javascript
I examined the situation more in depth:
1. The pom.xml in cdm-webapp was pretty much messed up in respect of th...
Andreas Kohlbecker
09:19 AM bug #6206 (In Progress): Vaadin view fail with: Failed to load the bootstrap javascript
Andreas Kohlbecker
10:17 AM Revision 5dc7cec8 (cdm-webapp): ref #6206 cleaning up - removing commented section
Andreas Kohlbecker
10:03 AM Revision a45e5ee7 (cdm-vaadin): fix #6206 mapping one @WebServlets to the path /VAADIN/*
Andreas Kohlbecker
09:36 AM Revision 5c9f4ef1 (cdm-vaadin): minor - removing comment
Andreas Kohlbecker
09:22 AM Revision d0ded6af (cdm-webapp): ref #6206 solving problems with the war overlay and adding test d...
Andreas Kohlbecker

11/21/2016

05:27 PM bug #6211 (Closed): massive heap consumption by service endpoint /portal/taxon/{uuid}/synonymy
some requests to /portal/taxon/{uuid}/synonymy are causing a massive heap consumption.
test case:
* http://int...
Andreas Kohlbecker
04:55 PM Revision 7635cc7d (cdm-dataportal): ref #6201 fixing problem related to changes in taxon/{uuid}/a...
Andreas Kohlbecker
03:57 PM bug #6209 (Resolved): NPE in DatasourceView
Applied in changeset commit:taxeditor|af45abb87611c04e93d103bd7c7df6221ca9e877. Katja Luther
03:41 PM bug #6209: NPE in DatasourceView
This was a really confusing error message. The original problem was that the remote database was not available. Katja Luther
03:05 PM bug #6209 (Closed): NPE in DatasourceView
occurres when connection to remote datasource
~~~
java.lang.NullPointerException
at eu.etaxonomy.taxeditor.data...
Andreas Kohlbecker
03:56 PM Revision af45abb8 (taxeditor): fix #6209: adapt the message if a datasource is not available
Katja Luther
03:45 PM bug #6210 (Closed): Null values for boolean fields are causing PropertyAccessException
test case: http://int.e-taxonomy.eu/cdmserver/integration_cichorieae/portal/taxon/6d711fa0-77c3-42df-9d44-83fdc78f348... Andreas Kohlbecker
02:29 PM Revision 176a8641 (cdm-dataportal): removing unused variable
Andreas Kohlbecker
02:27 PM Revision 0c5a23b6 (cdm-dataportal): removing obsolte method argument
Andreas Kohlbecker
02:23 PM task #6208 (Rejected): implement synonymy service responding with DTO
The synonymy as returned by the is portal/taxon/{uuid}/synonymy is sometime quite huge and contains a lot of unused i... Andreas Kohlbecker
12:55 PM Revision 9128dcb4 (cdm-dataportal): ref #6201 adapting portal to changes in taxon/{uuid}/accepted...
Andreas Kohlbecker
11:51 AM Revision b19c294b (cdmlib): ref #5974 fixing LIE in controller
Andreas Kohlbecker
10:16 AM bug #6130 (Closed): Areafilter widget broken
works on the test server Andreas Kohlbecker
10:12 AM bug #6130 (Resolved): Areafilter widget broken
Applied in changeset commit:cdm-dataportal|ba127310d2b704049857de82c3c09e1bdc87092c. Andreas Kohlbecker
10:12 AM Revision ba127310 (cdm-dataportal): fix #6130 areafilter widget fixed
Andreas Kohlbecker

11/19/2016

01:55 PM feature request #5727 (Closed): Offer German translation for texts used in molecular plugin
Most translations have now been done. Translating will from now on be done directly in the development further of the... Ben Stöver
01:29 PM Revision 80e535dd (taxeditor): Additional strings externalized in molecular plugin.
Wizard for exporting single read alignments now warns and prompts if files are overwritten.
Bug fix: Changes in the f...
Ben Stöver
07:59 AM Revision 767e3890 (cdmlib-apps): ref #3934 fix factCategory SQL
Andreas Müller

11/18/2016

10:22 PM Revision ea2e509b (cdmlib): Cleanup
Andreas Müller
10:22 PM Revision f8dab136 (cdmlib): ref #3934 update Salvador import for facts
Andreas Müller
10:20 PM Revision b06dca5c (cdmlib-apps): ref #3934 update Salvador import for facts
Andreas Müller
08:05 PM Revision 060676fe (cdmlib): solving polytomouskey node sort index problems
Katja Luther
06:25 PM Revision e9773ade (taxeditor): ref #5971: new main menu admin with cdm preference nomenclatural c...
Katja Luther
05:01 PM Revision ecd0d355 (taxeditor): Messages edited.
Support for parameters to export only single reads or only consensus implemented.
JavaDoc extended.
Ben Stöver
04:45 PM Revision 521599f6 (cdmlib-apps): minor compile issues
Andreas Müller
04:40 PM Revision 3d037d99 (cdmlib): Latest BM import updates for Salvador
Andreas Müller
04:35 PM Revision 209a4cf6 (cdmlib-apps): ref #3934 Latest changes in Salvador import
Andreas Müller
04:35 PM Revision 805b65b2 (cdmlib-apps): Adapt BgbmInstancesUpdater to new databases
Andreas Müller
04:35 PM Revision 70f32474 (cdmlib-apps): Add nom. illeg. superfl. to allowed nom.states. without basionym...
Andreas Müller
04:35 PM Revision bf075ec4 (cdmlib-apps): Adapt BMTaxonRelationExport to new Synonym model
Andreas Müller
04:35 PM Revision 12c99f84 (cdmlib-apps): cleanup
Andreas Müller
04:26 PM Revision 8ec912fc (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-...
Andreas Müller
04:26 PM Revision 13ab8f7a (cdmlib-apps): minor
Andreas Müller
03:45 PM Revision a862b815 (taxeditor): Missing files from last commit added.
Ben Stöver
03:43 PM Revision 00d1a6ce (taxeditor): Export single read alignment wizard separated into two pages.
Option to elongate sequences added.
Application information parameters of JPhyloIO set.
Ben Stöver

11/17/2016

07:17 PM Revision 7417db95 (taxeditor): Exported single read sequences are now filled up with gaps. (Will ...
Texts in ExportSequenceToFileHandler extzernalized and translated. Ben Stöver
05:22 PM Revision d0c85dbc (taxeditor): Strings in ExportSingleReadAlignmentWizardPage externalized and tr...
Ben Stöver
02:11 PM bug #6207: Import Salvador images
Hallo,
zur Frage Image Server oder nicht: „Erstmal“ können wir das mit dem Standard Viewer machen, aber sobald wir m...
Andreas Müller
02:05 PM bug #6207 (New): Import Salvador images
Andreas Müller
01:40 PM Revision 02e8904c (taxeditor): Fixes in ExportSingleReadAlignmentWizardPage layout.
Default values added to ExportSingleReadAlignmentWizardModel.
Updating values after model binding in ExportSingleRead...
Ben Stöver
12:18 PM bug #6206 (Closed): Vaadin view fail with: Failed to load the bootstrap javascript
When testing any vaadin view the following error is shown
~~~
Failed to load the bootstrap javascript: ./../VAADI...
Patrick Plitzner
12:13 PM bug #6200 (Closed): Exception when adding a new synonym (allowOverride)
Update script has been adapted. Remove target version as this was a temporary issue only caused by model update comin... Andreas Müller
11:40 AM feature request #6198 (Resolved): Remove synonym relationships in TaxEditor
Andreas Müller
11:39 AM feature request #5971: Implement database wide CdmPreference writing
This is a subtask of the more general implementation described in #6105 (but more or less also a duplicate) Andreas Müller
10:09 AM Revision 6ecec98b (taxeditor): ref #6198 removed synonym type combobox
Patrick Plitzner
10:06 AM Revision c9d05940 (taxeditor): ref #6198 Correctly initialise ui field for pro parte and partial
Patrick Plitzner
10:05 AM Revision 4f57e9bf (taxeditor): ref #6205 Move excluded notes to the bottom of the wizard
Patrick Plitzner

11/16/2016

11:18 PM Revision 7ffbdbb1 (taxeditor): Export single read alignment wizard validation refactored and exte...
Some German translations in molecular plug-in added. Ben Stöver
09:25 PM Revision 661914be (taxeditor): Intermediate commit in implementing wizard validation (before movi...
Plug-in dependencies added to molecular. Ben Stöver
05:29 PM bug #6199 (Feedback): Excluded note for excluded taxon nodes in TaxEdtior
Looks like other additional languages are not stored correctly.
Also we may think about make it fully invisible as...
Andreas Müller
05:25 PM feature request #6197 (Closed): Move excluded and unplaced from Taxon to TaxonNode in TaxEditor
Works well. There is a follow up ticket #6205. Andreas Müller
05:24 PM bug #6205 (Duplicate): Move excluded nodes to the bottom of the list in TaxEditor navigator
... and also ad a symbol to the node that shows that it is excluded.
We may also think about adding a "set to excl...
Andreas Müller
05:17 PM feature request #6198 (Feedback): Remove synonym relationships in TaxEditor
Andreas Müller
05:16 PM feature request #6198: Remove synonym relationships in TaxEditor
There is a more general issue related to #5523 and #5877.
Currently the synonym type is not handled correctly by t...
Andreas Müller
05:13 PM feature request #6198: Remove synonym relationships in TaxEditor
It looks like partial and pro parte is not persisted. Andreas Müller
04:52 PM feature request #5778 (Closed): Update symbols for PresenceAbsenceTerms in existing databases
Andreas Müller
04:32 PM bug #5826 (Closed): Clean up names with empty name descriptions
Andreas Müller
04:23 PM feature request #5921 (Closed): Change symbol for congruence relationship.
Andreas Müller
04:21 PM feature request #5981 (Closed): Add abbreviation to Rank "Cultivar"
Andreas Müller
10:57 AM bug #4965: unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
Please review the latest change 32e833cb Andreas Müller
10:47 AM feature request #5634 (Closed): Excluded note for excluded taxa /taxon nodes
Andreas Müller
10:46 AM feature request #6204 (New): Show excludedNote in dataportal
for more information see model change ticket #5634. The new field should be shown in the dataportal (maybe configurab... Andreas Müller
10:43 AM feature request #5875 (Closed): Add isDefault flag to DescriptionBase
Andreas Müller
10:40 AM feature request #5952 (Closed): Second cache field for specimen (identityCache)
Andreas Müller
10:38 AM bug #5976 (Closed): Update sortIndex for potential nullValue sortIndexes
Andreas Müller
10:37 AM task #6089 (Closed): Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
Andreas Müller

11/15/2016

05:33 PM Revision 8fb27488 (cdmlib): ref #4867 Set sec reference for taxa in cloned classification
Patrick Plitzner
05:28 PM bug #6199 (Resolved): Excluded note for excluded taxon nodes in TaxEdtior
Applied in changeset commit:taxeditor|ac1659d4fb4bd6a0f42c5e3cef97dee1ccad7925. Patrick Plitzner
05:27 PM Revision ac1659d4 (taxeditor): fix #6199 Excluded note for excluded taxon nodes in TaxEditor
Patrick Plitzner
05:27 PM bug #6200: Exception when adding a new synonym (allowOverride)
In my case setting the only one existing preference for which code to use to 0 solved the problem. Before the value w... Patrick Plitzner
12:29 PM bug #6200: Exception when adding a new synonym (allowOverride)
This was probably an issue in the update script. Fixed now, but for database which already ran the update script you ... Andreas Müller
12:24 PM bug #6200 (Resolved): Exception when adding a new synonym (allowOverride)
Applied in changeset commit:cdmlib|b6ee6df472c8eaccb21369ebd429e9feacc78e36. Andreas Müller
10:58 AM bug #6200 (Closed): Exception when adding a new synonym (allowOverride)
1. In any DB press enter in the name editor to create a new synonym
1. The following error is logged
~~~
org.h...
Patrick Plitzner
05:09 PM Revision 924ba372 (taxeditor): ExportSingleReadAlignmentWizard now exposes whole format info object.
FileDialog added to ExportSingleReadAlignmentWizardPage. Ben Stöver
03:11 PM Revision 94e60697 (taxeditor): Clean up Derivate perspective
- Remove Derivate view as it is not a view but an editor (they have
their own designated area)
Patrick Plitzner
03:10 PM Revision 48005c5f (taxeditor): Fix potential NPE
Patrick Plitzner
03:03 PM feature request #3925 (Closed): Unplaced and excluded to TaxonNode
Andreas Müller
03:00 PM feature request #6203 (New): Implement unplaced and excluded in dataportal
~~The unplaced and excluded flags have been moved from Taxon to TaxonNode (#3925). This should be taken in account in... Andreas Müller
02:54 PM bug #3658 (Closed): Update Nomenclatural code for datasources
Andreas Müller
02:53 PM bug #6202 (New): Disable "New" button in toolbar when editor is not connected
The options are not filtered like those in the menu bar and can produce exceptions Patrick Plitzner
02:50 PM bug #6201 (Closed): Adapt dataportal to the new synonym datamodel
Synonym relationships have been removed. Synonyms do now directly link to accepted taxa. This needs to be adapted in ... Andreas Müller
02:41 PM feature request #5971: Implement database wide CdmPreference writing
allowOverride #5970 is now fixed, so we can finalize this task. Andreas Müller
02:22 PM feature request #5970 (Closed): Implement allowOverride in CdmPreference
Andreas Müller
02:21 PM feature request #5970: Implement allowOverride in CdmPreference
This is fully resolved now. Please update taxeditor accordingly if needed. Andreas Müller
12:42 PM bug #5976 (Resolved): Update sortIndex for potential nullValue sortIndexes
PKNode also implemented now. Should be resolved. Andreas Müller
12:23 PM Revision b6ee6df4 (cdmlib): fix #6200 Change order of NomenclaturalCodeUpdater and allowOverride ...
Andreas Müller
11:37 AM Revision b1b8716e (cdmlib): Remove deprecated adder methods for multilanguage text
Andreas Müller
11:34 AM Revision 85b59453 (cdmlib): ref #5634 add getter and putter for excluded note
Andreas Müller
11:07 AM Revision b7c0b206 (cdmlib): cleanup and javadoc
Andreas Müller
11:07 AM Revision 93ad47c4 (cdmlib): ref #5976 add PKNode sortindex update
Andreas Müller
10:51 AM feature request #6198 (Resolved): Remove synonym relationships in TaxEditor
Applied in changeset commit:taxeditor|69410b96c9c8e1e23d68cd782867171c2e1cd084. Patrick Plitzner
10:50 AM feature request #6197 (Resolved): Move excluded and unplaced from Taxon to TaxonNode in TaxEditor
Applied in changeset commit:taxeditor|3e194787899d08624921b3b5cbb109ebcc74b4f5. Patrick Plitzner
10:50 AM Revision 69410b96 (taxeditor): fix #6198 Remove synonymrelationships in TaxEditor
Patrick Plitzner
10:12 AM Revision 3e194787 (taxeditor): fix #6197 Move excluded and unplaced from Taxon to TaxonNode in
TaxEditor Patrick Plitzner
09:47 AM Revision fdefb4bc (taxeditor): Fix possible widget is disposed exception
Patrick Plitzner
09:35 AM Revision e701bdea (taxeditor): Fix potential NPE
Patrick Plitzner
08:45 AM Revision 45844ac2 (cdmlib): ref #5974 fix update script for synonym duplicates
Andreas Müller
08:43 AM Revision eaf29c2e (cdmlib): cleanup
Andreas Müller

11/14/2016

07:34 PM Revision bcb823d5 (taxeditor): Missing dependency Apache commons.lang added to molecular.lib.
Single read alignment export feature now makes use of wizard. (Selecting which sequences to export is not yet support... Ben Stöver
05:34 PM Revision 9a9359ce (taxeditor): New JPhyloIO package now exported by molecular.lib.
SingleReadAlignmentPredicates renamed to SingleReadAlignmentRDFXMLConstants.
Pherogram alignment shifts are now writt...
Ben Stöver
04:12 PM Revision fc53d911 (taxeditor): cleanup
Andreas Müller
04:12 PM Revision 0d726c87 (taxeditor): Move MoveTaxonOperationTest to navigation package and try to enable
Andreas Müller
03:58 PM bug #6199: Excluded note for excluded taxon nodes in TaxEdtior
Please ask Katja if unclear how to implement. Andreas Müller
03:56 PM bug #6199 (Closed): Excluded note for excluded taxon nodes in TaxEdtior
See related ticket #5634 for more information.
We need to add a multi-language field here.
Andreas Müller
03:52 PM feature request #6198 (Closed): Remove synonym relationships in TaxEditor
See parent ticket for more information.
The according elements have been commented in existing DetailsSection(s). ...
Andreas Müller
03:48 PM feature request #6197 (Closed): Move excluded and unplaced from Taxon to TaxonNode in TaxEditor
See parent ticket for more information.
The according field have been commented in existing DetailsSection(s). Ple...
Andreas Müller
02:38 PM Revision e042ef3a (taxeditor): ref #5875 fix testdata in TaxEditor
Andreas Müller
02:27 PM Revision b3570263 (taxeditor): ref #5875 fix testdata in TaxEditor
Andreas Müller
02:26 PM Revision d837c623 (taxeditor): add gitignore
Andreas Müller
02:13 PM Revision d0899d41 (taxeditor): ref #3925 fix testdata in TaxEditor
Andreas Müller
02:01 PM Revision 18336f56 (taxeditor): ref #3925 fix testdata in TaxEditor
Andreas Müller
01:39 PM Revision 9300078c (taxeditor): ref #3925 fix testdata in TaxEditor
Andreas Müller
01:38 PM Revision 7f30d120 (taxeditor): Clean up
Andreas Müller
01:20 PM Revision 71cfddb2 (taxeditor): ref #3925 fix testdata in TaxEditor
Andreas Müller
01:19 PM Revision 4fe73167 (taxeditor): clean up
Andreas Müller
01:19 PM Revision 478830af (taxeditor): Add dataset.dtd to TaxEditor test data
Andreas Müller
01:05 PM bug #6195 (New): suppress footnotes in search results page
showing annotations in the results page is not only undesirable but also slows down the page rendering process. Andreas Kohlbecker
10:57 AM Revision a0069258 (taxeditor): Try to reinstall tests for MoveTaxonOperation (maybe not yet correct)
Andreas Müller
10:56 AM Revision 691ace9e (taxeditor): Cleanup
Andreas Müller
10:56 AM Revision c81df78d (taxeditor): Update testdata in TaxEditor to model changes
Andreas Müller
10:19 AM Revision e4e86d74 (taxeditor): Update TaxEditor tests to model changes
Andreas Müller
09:44 AM bug #6131 (Closed): Vaadin DistributionEditor TODOS
Patrick Plitzner
09:26 AM Revision 9fe639a8 (cdm-vaadin): ref #6131 Redirect for old URLs
- deleted test ui class Patrick Plitzner

11/13/2016

06:24 PM Revision 0608d733 (taxeditor): ExportSingleReadAlignmentWizardPage now allows to select output fi...
format. Ben Stöver

11/11/2016

02:18 PM Revision e73a46a0 (taxeditor): ref #5974 Some synonymRelationship updates in TaxEditor tests
Andreas Müller
02:07 PM Revision 1b945f03 (taxeditor): ref #5974 Some synonymRelationship updates
Andreas Müller
01:58 PM Revision aa01111e (taxeditor): ref #5974 Some synonymRelationship updates and update for dataset....
Andreas Müller
01:52 PM bug #6194 (Duplicate): can't enter a new reference from feature data (Faktendaten)
1. created description of a new fact for a taxon (Corvidae)
2. wanted to add a reference
3. reference was not yet i...
Gabriele Dröge
01:43 PM Revision 96387738 (taxeditor): Revert "update model for cdm cache in TaxEditor" classpath changes
This partly reverts commit cfb2c8db2bd6905fd8b5805915556b87af14984f. Andreas Müller
01:41 PM Revision cfb2c8db (taxeditor): update model for cdm cache in TaxEditor
Andreas Müller
01:14 PM Revision 10035678 (taxeditor): update TaxEditor H2 test database to new model
Andreas Müller
01:12 PM Revision ceb3e3f3 (cdmlib): ref #3925 and #5974 Improve update script for non unique subqueries
Andreas Müller
12:35 PM bug #6192 (New): taxon annotations only shown when 'Show accepted taxon on top of the synonymy' ...
taxon annotations are missing when 'Show accepted taxon on top of the synonymy' is not enabled in http://portal.cyb... Andreas Kohlbecker
12:12 PM bug #6157: Consider implementing quick setup button "Quick Singlepage Configuration'"
Walter: Diese Beschreibung habe ich in die Doku aufgenommen - wenn das anders implementiert wird, bitte bescheid sagen. Walter Berendsohn
11:23 AM Revision c67d01cb (cdmlib): ref #5970 remove transient from allowOverride
Andreas Müller
10:55 AM Revision dc54e76e (taxeditor): ref #3925 remove unplaced and excluded from taxon view
Andreas Müller

11/10/2016

04:30 PM Revision e7c1e4aa (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into...
Andreas Müller
02:49 PM Revision 9c48245f (cdmlib): delete TestCase from BioCaseQueryServiceWrapper
Katja Luther
01:50 PM Revision 0d2ee5d6 (taxeditor): fix #4461 fix ordering for Datasource View
Andreas Müller
01:50 PM Revision 266b34fd (taxeditor): cleanup
Andreas Müller
01:50 PM Revision 9e4b94cb (taxeditor): ref #3658 remove nomenclatural code from datasources
Andreas Müller
01:50 PM Revision df95e395 (taxeditor): cleanup
Andreas Müller
01:50 PM Revision 10644642 (taxeditor): ref #3658 remove nomenclatural code from datasources
Andreas Müller
01:50 PM Revision bdd1bcf5 (taxeditor): ref #5974 Remove synonym relationships (rename synRelType to synRe...
Andreas Müller
01:50 PM Revision 5215f59f (taxeditor): ref #3658 remove nomenclatural code from datasources
Andreas Müller
01:50 PM Revision d34abf30 (taxeditor): ref #5974 Remove synonym relationships (compiling)
Andreas Müller
01:45 PM Revision 5521f23c (cdm-vaadin): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdm-vaa...
Andreas Müller
01:32 PM Revision 92afad3d (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-...
Conflicts:
app-import/src/main/java/eu/etaxonomy/cdm/app/common/CdmDestinations.java
app-import/src/main/java/eu/et...
Andreas Müller
01:09 PM Revision f3fc1024 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into...
Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonInteraction.java
cdmlib-services/src/...
Andreas Müller
12:54 PM Revision b6e8ecc0 (cdmlib-apps): Cleanup and remove deprecated method
Andreas Müller
12:53 PM Revision 1ba3392b (cdmlib-apps): Update Salvador import
Andreas Müller
12:48 PM Revision e25fecb9 (cdmlib): cleanup
Andreas Müller

11/09/2016

04:08 PM Revision 49bb0781 (taxeditor): i18n for AuthenticationUserBar
Patrick Plitzner
02:57 PM bug #6191: Update context menu in name editor after "Change to accepted taxon"
This behavior was observed during the Rote Liste 2020 Workshop in Nov. 2016 Andreas Müller
12:37 PM bug #6191 (New): Update context menu in name editor after "Change to accepted taxon"
menu options are not refreshed after operation is done Patrick Plitzner
11:33 AM bug #6190 (Closed): remove svn property place holder in first line of code
The first line of almost each java code file is a special place holder '// $Id$' which was meant to be replaced by th... Andreas Kohlbecker

11/08/2016

04:41 PM bug #6115: protect cdm content by drupal permission
I fixed the above described bug. Please test again.
NOTE: There is a new section in the description on how to test...
Andreas Kohlbecker
04:38 PM bug #6115 (Resolved): protect cdm content by drupal permission
Applied in changeset commit:cdm-dataportal|239c4040ea26be2c36b2344e4aa276f27bee55db. Andreas Kohlbecker
01:34 PM bug #6115: protect cdm content by drupal permission
Andreas Müller wrote:
> Currently the taxon tree is still shown at Flora Malesiana: http://test.e-taxonomy.eu/datapo...
Andreas Kohlbecker
01:15 PM bug #6115: protect cdm content by drupal permission
Currently the taxon tree is still shown at Flora Malesiana: http://test.e-taxonomy.eu/dataportal/preview/flora-malesi... Andreas Müller
12:27 PM bug #6115 (In Progress): protect cdm content by drupal permission
The protection can be by passed by accesing the the content via the drupal node integration. An according check must ... Andreas Kohlbecker
04:37 PM Revision 239c4040 (cdm-dataportal): fix #6115 adding missing permission check to cdm nodes integr...
Andreas Kohlbecker
04:22 PM bug #6186 (Rejected): Drupal nodes are created even if Create drupal nodes is off
cannot reproduce this
I tested this with the following portals in which all CDM nodes have been deleted now:
*...
Andreas Kohlbecker
12:29 PM bug #6186 (Worksforme): Drupal nodes are created even if Create drupal nodes is off
This refers to the setting admin/config/cdm_dataportal/settings#edit-cdm-drupal-node-creation Andreas Kohlbecker
03:07 PM feature request #6041 (In Progress): Change the label of "Set as basionym of homotypical group"
Andreas Müller
02:47 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
Set back to unassigned CDM tickets as first child tickets have to be resolved. Andreas Müller
02:40 PM feature request #6188 (New): Make "Set as basionym of homotypical group" an optional function
See parent ticket. Still needs discussion if this is really wanted. Andreas Müller
02:36 PM feature request #6187 (New): [DISCUSS] Ask W.Greuter about "type providing name"
See parent ticket Andreas Müller
02:32 PM bug #6174 (Closed): LIE when deleting new name
Seems to be fixed Andreas Müller
02:29 PM Revision b22621fd (cdm-vaadin): ref #5458 Avoid possible exception for case sensitive root node c...
Patrick Plitzner
02:23 PM Revision ae5a0d99 (cdmlib): Minor changes to classification clone method
Andreas Müller
02:22 PM Revision 104cc879 (cdmlib): Clean up
Andreas Müller
02:21 PM Revision a6f3a18c (cdmlib): Clean up deprecated methods in name service
Andreas Müller
02:00 PM Revision 9bb42d8a (cdm-vaadin): ref #5458 Fix node retrieval for classification
Patrick Plitzner
01:53 PM Revision bea4aa93 (cdm-vaadin): ref #5458 label for null selection (remove status)
Patrick Plitzner
01:48 PM Revision 8a6e2f9a (cdm-vaadin): ref #5458 Refresh titlecache of named area vocabularies
Patrick Plitzner
01:47 PM Revision f9ea11c9 (cdm-vaadin): ref #5458 Allow one-click selection for status term
Patrick Plitzner
01:45 PM bug #6023 (Closed): configuration problems with maven-antrun-plugin
Seems to work. I also tested the latest build on a machine with java 1.7 installed (pesihpc) and got no problems. Andreas Müller
01:40 PM Revision 82a22019 (cdmlib): Cleanup
Andreas Müller
01:38 PM bug #6176 (Closed): Creating a new Reference throws TOE (TransientObjectException)
Seems to be fixed. I remove target version as it was a temporary regression only. Andreas Müller
01:36 PM feature request #5972: Prevent user from unwanted author and reference updates
It looks like it wokrs only for references until now. But we need it for all objects (if this is difficult, at least ... Andreas Müller
01:34 PM feature request #5972 (Feedback): Prevent user from unwanted author and reference updates
I would change the label to "This reference is referenced by xxx records. The change will take for all these records.... Andreas Müller
12:11 PM bug #5692 (Closed): Delete a person within the bulk editor deletes the person even if not saved
Seems to be fully fixed now. Great. Andreas Müller
12:04 PM bug #5680 (Closed): Out-of-Memory when editing TaxonInteraction
Seems to be fixed. There might be some other such issues. See #3841 Andreas Müller
09:34 AM bug #5680 (Resolved): Out-of-Memory when editing TaxonInteraction
Applied in changeset commit:cdmlib|4b5eb627a4a79b7dfb7588779e1ef566a69c8ecc. Katja Luther
09:33 AM bug #5680: Out-of-Memory when editing TaxonInteraction
The problem was the naming of the getter method for description. It was getDescriptions() but should be getDescriptio... Katja Luther
10:26 AM Revision c9181133 (cdmlib): ref #4866 Set sec reference for taxa when cloning classification
Patrick Plitzner
10:21 AM task #6158: Update EDIT documentation from svn to git
Also generally try to update the site where necessary. E.g. java version is now 1.7 Andreas Müller
10:04 AM Revision 211add74 (taxeditor): smaller changes to display taxon interactions
Katja Luther
10:04 AM Revision 935960dc (taxeditor): ref #6176: the referencingObjectsCount is only called for wizards ...
Katja Luther
09:48 AM Revision a663859a (cdmlib): minor
Katja Luther
09:46 AM Revision aede647b (cdmlib-apps): adapt getDescription() see #5680
Katja Luther
09:42 AM Revision 4b321494 (cdm-vaadin): ref #5458 Fix node retrieval and taxonTree refresh
Patrick Plitzner
09:36 AM bug #6077 (Closed): Import of gathering images
Katja Luther
09:32 AM Revision 205b4b75 (cdmlib): missed to add the adapted test
Katja Luther
09:28 AM Revision 4b5eb627 (cdmlib): fix #5680: get method needs to be named like the attribute
Katja Luther
09:16 AM Revision ba0e4a8c (cdm-vaadin): ref #5458 Allow null selection to remove distribution status
Patrick Plitzner

11/07/2016

01:04 PM Revision 6dd0db6f (cdmlib): switching maven-jetty plugin back to jdk 1.7 compatible version
Andreas Kohlbecker
12:35 PM Revision ef6db0d3 (cdm-vaadin): lowering java target version to 1.7
Andreas Kohlbecker
12:17 PM bug #6023 (Resolved): configuration problems with maven-antrun-plugin
Applied in changeset commit:cdmlib|1ddde622ae10b01976cdb99fb50a469a5506ca7e. Andreas Kohlbecker
12:17 PM bug #6023 (In Progress): configuration problems with maven-antrun-plugin
Andreas Kohlbecker
12:16 PM Revision 1ddde622 (cdmlib): fix #6023 solving compatibility problems of aspectj with java 1.8 and...
Andreas Kohlbecker
11:45 AM Revision 974ae00d (cdm-vaadin): updating DataSourceConfigurer with new code from cdmlib-remote - ...
Andreas Kohlbecker
11:45 AM Revision ca950879 (cdm-vaadin): removing scope provided from launcher
Andreas Kohlbecker
11:45 AM Revision ab7b3cd1 (cdm-vaadin): fixing dependency management problems
- letting versions be managed through cdmlib-parent
- depending project on cdmlib-remote
- removing classes clone...
Andreas Kohlbecker
11:45 AM Revision 479b0055 (cdm-vaadin): simplifying dependencies in pom.xml (using scope 'compile' where ...
Andreas Kohlbecker
11:45 AM Revision 25c1d6d8 (cdm-vaadin): fixin project setup:
- solving maven warnings
- solving some dependency problems (itextpdf, ...)
- solving dependency probelms with je...
Andreas Kohlbecker
11:45 AM Revision cd760b09 (cdm-vaadin): fixing double servlet mapping
Andreas Kohlbecker
11:45 AM Revision abbbb46c (cdm-vaadin): disabling SuperDev mode which is now on by default
Andreas Kohlbecker
11:45 AM Revision 0cb4f241 (cdm-vaadin): setting vaadin production mode to true - globally
Andreas Kohlbecker
11:45 AM Revision d436d94e (cdm-vaadin): adding developer logging config to ide launcher
Andreas Kohlbecker
11:45 AM Revision 201dfb32 (cdm-vaadin): ref #5862 adding missing dependency to provide missing xsd when o...
Andreas Kohlbecker
11:45 AM Revision c7bddd78 (cdm-vaadin): gitignore
Andreas Kohlbecker
11:45 AM Revision 2693d2d2 (cdm-vaadin): fixing startup, dependency problems of jetty
- fixed for eclipse ide
- fixed for maven-jetty plugin
Andreas Kohlbecker
11:28 AM Revision 5a9620a0 (cdmlib): updating maven-jetty plugin
Andreas Kohlbecker
10:43 AM bug #5862: Spring needs online resources during launch
a much better solution is to let the versions be managed through the pom.xml of cdmlib-parent:
~~~xml
<dependen...
Andreas Kohlbecker
10:41 AM bug #5862 (Resolved): Spring needs online resources during launch
Applied in changeset commit:cdmlib-apps|a6c3d024c6c3121786f55c474655f4f1dd2fd2a2. Andreas Kohlbecker
10:41 AM Revision a6c3d024 (cdmlib-apps): fix #5862 by correctly managing dependencies
Andreas Kohlbecker
10:31 AM Revision dd998643 (cdmlib-apps): managing cdmlib dependencies
Andreas Kohlbecker
09:52 AM Revision 96661f94 (cdmlib): smaller changes for abcd import
Katja Luther
09:51 AM Revision 2704bbc5 (cdmlib): revert adding error log
Katja Luther
09:43 AM Revision 3522e0b1 (cdmlib): minor
Katja Luther
09:42 AM Revision 57089e91 (cdmlib): minor
Katja Luther
09:33 AM Revision ce790c77 (cdmlib): ref #6166: import siblings if an specimen and smaller changes in ABCD
import Katja Luther

11/06/2016

02:22 PM Revision 66e8ec64 (cdmlib): ref #4866 Fix transient object exception
- fixed typo Patrick Plitzner
02:21 PM Revision 5d3fd02f (taxeditor): ref #4867 Implement "Clone Classification" functionality
- availabel via context menu in taxon navigator
- parameters available: classification name, taxon relation from clo...
Patrick Plitzner
01:00 PM Revision 7d8eced5 (cdmlib): ref #4866 Test for first implementation for clone classification
Patrick Plitzner
01:00 PM Revision cea52158 (cdmlib): ref #5449 Imporvements for CSV export
- Fix initialization problems
- Correctly match taxon name to chosen classification
- allow export for single leaf ...
Patrick Plitzner
01:00 PM Revision 7e313273 (cdmlib): ref #4866 Create new description set when cloning taxon (avoid
HibernateException) Patrick Plitzner
01:00 PM Revision 355c89cb (cdmlib): ref #4866 First implementation for clone classification (including test)
Patrick Plitzner
 

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