Activity
From 08/28/2016 to 09/26/2016
09/26/2016
- 05:25 PM feature request #6110 (Closed): Use https for map service calls when the portal is access via https
- 03:17 PM feature request #6076: Specimen biocase search should work on observations
- The specimen search works only for preserved specimen, but should return all kind of specimen.
Therefore the filte... - 01:33 PM feature request #6076 (In Progress): Specimen biocase search should work on observations
- Please add some more information what it is all about.
- 02:38 PM feature request #5969 (Resolved): Implement CdmPreference reading for database preferences
- In Revision 4625a011 a check for the existence of the preference in DB is added.
- 01:48 PM bug #6051: Add toggle button for simple details view for names
- try to synchronize with same issue in media view
- 01:13 PM bug #4348: Remove InputDialog in creating new bulk editor entities where not needed
- Explain solution with wizards and create new tickets for all required wizards.
- 12:18 PM feature request #5185 (Worksforme): drag & drop for descriptions and descriptionElements
- Drag & drop works fine. But after creating a new Description you have to save before move a descriptionelement to the...
- 10:15 AM feature request #5185: drag & drop for descriptions and descriptionElements
- Is this still open. Adapt target version if closed.
- 12:17 PM bug #6109 (Worksforme): Drag & Drop after creating a new description fails
- When creating a new description and try to move a description element to this new description without saving throws t...
- 10:36 AM bug #6042: Campanula portal TODOS
- Please create sub tasks and add mails as comments
- 10:24 AM bug #6077 (Resolved): Import of gathering images
- 09:39 AM bug #6088: New reproducable multiple representations exception for name relationships
- I think I could find when this exception occurs: Always when using a name already opened in bulk editor to create the...
- 08:52 AM Revision c92df786 (taxeditor): ref #3573 Add streamlined ABCD import configurator page
- 08:36 AM Revision 84bd3966 (taxeditor): Fix label for term vocabularies in term editor
- 08:14 AM Revision dd433955 (cdm-vaadin): ref #5458 Add named areas selection box
- 06:32 AM Revision 9c1235e7 (taxeditor): Trim code
- 05:31 AM Revision ce1318e1 (cdm-vaadin): ref #5458 Enhance detail window messages
09/23/2016
- 04:47 PM Revision 190378ef (cdm-server): Merge branch 'release/4.3.0' into develop
- 04:46 PM Revision 3c5d8ea0 (cdm-server): updating poms for branch'release/4.3.0' with non-snapshot versions
- 04:46 PM Revision 7cafc316 (cdm-webapp): Merge branch 'release/4.3.0' into develop
- 04:46 PM Revision 20c2c91a (cdm-webapp): updating poms for branch'release/4.3.0' with non-snapshot versions
- 04:46 PM Revision 8b3f925a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.3.0
- 04:24 PM Revision 2753ac07 (taxeditor): Merge branch 'release/4.3.0' into develop
- 04:24 PM Revision 0875c8c1 (taxeditor): Merge branch 'release/4.3.0'
- 03:53 PM Revision 27615a57 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 03:53 PM Revision 85ba0f85 (cdm-vaadin): Merge branch 'release/4.3.0' into develop
- 03:51 PM Revision 9253394c (cdm-vaadin): updating poms for branch'release/4.3.0' with non-snapshot versions
- 03:51 PM Revision 51a19104 (cdm-vaadin): jenkins bumping cdmlib.version to 4.3.0
- 03:48 PM Revision b77c38e5 (cdm-dataportal): Merge branch 'release/4.3.0' into develop
- 03:47 PM Revision 9ed30d90 (cdm-dataportal): updating poms for branch'release/4.3.0' with non-snapshot versions
- 03:47 PM Revision edab5d9f (cdm-dataportal): release-preparation: production level css
- 03:37 PM Revision 24d785a7 (cdmlib): Updating develop poms back to pre merge state
- 03:37 PM Revision 8eb64819 (cdmlib): Merge branch 'master' into develop
- 03:37 PM Revision d735544d (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 03:37 PM Revision f1bba308 (cdmlib): Merge branch 'release/4.3.0'
- 03:20 PM feature request #6066 (Closed): Edaphobase DTO for getChildrenTaxaOfId
- 02:00 PM feature request #6066 (Resolved): Edaphobase DTO for getChildrenTaxaOfId
- 02:00 PM feature request #6066: Edaphobase DTO for getChildrenTaxaOfId
- New version in classification controller:
http://test.e-taxonomy.eu:80/cdmserver/edaphobase_test/classification/5d... - 03:19 PM Revision c036b9c0 (cdmlib): updating poms for branch'release/4.3.0' with non-snapshot versions
- 03:16 PM bug #6073 (Closed): Fix groupByHigherTaxon webservice
- 03:15 PM Revision 304b03cc (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.3.0-SNAPSHOT
- 03:15 PM Revision a9e96f8b (cdm-webapp): updating poms for 4.4.0-SNAPSHOT development
- 03:15 PM Revision dcd4cc8e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.4.0-SNAPSHOT
- 03:15 PM Revision 60b7d5b5 (taxeditor): Updated version in pom / project files to taxeditor version : 4.4.0-SNAPSHOT and cdmlib version : 4.4.0-SNAPSHOT
- 03:15 PM Revision 82b02bfc (taxeditor): Updated version in pom / project files to taxeditor version : 4.3.0 and cdmlib version : 4.3.0
- 03:12 PM Revision c87034b8 (cdm-vaadin): jenkins bumping cdmlib.version to 4.3.0-SNAPSHOT
- 03:12 PM Revision 24e2f0a4 (cdm-vaadin): updating poms for 4.4.0-SNAPSHOT development
- 03:12 PM Revision 5043921c (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0-SNAPSHOT
- 03:12 PM Revision 266b0280 (cdm-server): updating poms for 4.4.0-SNAPSHOT development
- 03:12 PM Revision 1360e865 (cdm-dataportal): updating poms for 4.4.0-SNAPSHOT development
- 03:09 PM Revision 16007e6b (cdmlib): updating poms for 4.4.0-SNAPSHOT development
- 02:52 PM bug #6071 (In Progress): Handle Taxonomische Großgruppen correctly in Edaphobase
- Offen:
~~Import~~
Evtl. Offen:
... ~~und danach soll eine Liste von Taxa gruppiert werden können~~ - 02:48 PM Revision 38e1c00c (cdmlib): Rename doPageChildNodes
- 02:41 PM bug #6072: Implement getTaxonomicGroups for Edaphobase
- Open issue: handle includeEntity correctly
- 02:40 PM bug #6072: Implement getTaxonomicGroups for Edaphobase
- This has been solved by implementing findByMarker similar to findByIdentifier.
Example:
http://test.e-taxonomy... - 02:28 PM bug #6064: Edaphobase problems with webservices
- Beispiel für grouping: http://test.e-taxonomy.eu:80/cdmserver/edaphobase_test/classification/5d9865e6-84fe-4fff-b36b-...
- 12:16 PM feature request #6065 (Resolved): Edaphobase DTO for getTaxonById
- Still to test: fehlerhafte UUIDs sollten zu 404 (Reseource not found) Fehler führen.
- 12:14 PM feature request #6065: Edaphobase DTO for getTaxonById
- Examples:
Taxon with child and synonym:
http://test.e-taxonomy.eu:80/cdmserver/edaphobase_test/classification/5... - 11:40 AM Revision 45e49818 (cdmlib): ref #6065 improved Pager handling
- 11:06 AM Revision cb994835 (cdmlib): ref #6065 improved Pager handling and pager exception handling
- 11:03 AM Revision cf76baeb (cdmlib): ref #6065 Handle synonyms in taxonInContext
- 11:00 AM Revision 322ee472 (cdmlib): Cleanup
09/22/2016
- 03:33 PM Revision 38798657 (cdm-vaadin): ref #5458 Enhance user messages
- 02:10 PM Revision 316e2aa5 (cdmlib): ref #6065 fix NPEs in classification service
- 01:25 PM Revision d9ea157d (cdmlib): ref #6065 fix NPE in pageSize/limit
- 12:27 PM Revision 3b841bb7 (cdmlib): ref #6065 fix NPE in pageSize
- 12:00 PM Revision 6ae724c9 (cdm-vaadin): ref #5458 Fix duplicate column exception
- 11:54 AM Revision 3ed14411 (cdm-vaadin): ref #5458 Extract duplicate code
- 11:31 AM Revision 6f0224b6 (cdm-vaadin): ref #5458 Do view data binding in enter() method of table view
- 11:27 AM bug #6108 (New): Too many columns exception when selecting TDWG areas in distribution editor
- ~~~
Sep 22, 2016 11:26:11 AM com.vaadin.data.util.sqlcontainer.SQLContainer getPropertyIds
Warnung: Failed to fetch... - 11:20 AM Revision b1a08bb1 (cdmlib): ref #6065 fix page size and add marked ancestors
- 10:37 AM Revision 765139ec (cdmlib): ref #6065 fix missing taxonUuid in URL
- 09:34 AM Revision 9f8c87ee (cdm-vaadin): ref #5458 Implement update of distribution editor via settings window
09/21/2016
- 09:26 PM Revision 16acec00 (taxeditor): fix transient services
- 05:49 PM Revision e1f5fda9 (cdmlib): ref #6065 first implementation of taxonInContext service
- 05:47 PM Revision 59dbcede (cdmlib): cleanup
- 04:30 PM Revision 3e9b93db (cdm-vaadin): ref #5458 Correctly log out of session when clicking logout button
- 03:19 PM task #6107 (New): Establish performance monitoring
- The suggestions given in https://www.infoq.com/articles/Diagnose-Microservice-Performance-Anti-Patterns could help us...
- 03:11 PM Revision c1499ddd (cdmlib): further refactor FindByIdentifierDTO and FindByMarkerDTO
- 02:48 PM Revision ff5981db (cdmlib): rename FindByIdentifierDTO and FindByMarkerDTO
- 01:07 PM feature request #5890: Implement auto-suggest for data portal
- Added "Experimental" to settings description
Should we move this feature to 4.4? - 01:06 PM Revision 6a5d84e2 (cdm-dataportal): ref #5890 Added "Experimental" to settings description
- 01:03 PM feature request #5969: Implement CdmPreference reading for database preferences
- If no datasource is selected an NPE occurs:
~~~
login :
editor version : 4.3.0.201609201350
server : /
sche... - 12:05 PM feature request #5969: Implement CdmPreference reading for database preferences
- The implementation in the local preferences UI works well now and I think we can close the ticket.
But maybe we ca... - 12:04 PM bug #6106 (Closed): [Discuss] Handle rights and roles for CdmPreferences
- Currently every user can change CdmPreferences.
Do we need a new role "CdmPreferenceAdmin" or should the right be ... - 12:00 PM Revision 5eb888b1 (cdmlib-apps): ref #5448 Remove unnecessary saving
- 12:00 PM Revision a3140a55 (cdmlib-apps): ref #5448 Enhance name checking
- 11:45 AM bug #6086 (Closed): Percentage value in ProgressMonitor accuratly rounded
- This seems to be fully solved.
- 11:30 AM bug #6105 (Closed): Make CdmPreferences editable in separate view
- We started editing CdmPreferences in #5969. This is experimental as the UI mixes local preferences with CdmPreference...
- 11:30 AM feature request #6037 (Rejected): Allow intermediate commits in Excel import
- This would be nice to have but did not work after the initial implementation, solving the errors seems not worth it. ...
- 11:26 AM Revision 19c7c9f3 (cdmlib): Revert "fix #6037 per batch transction commit implemented for excel imports"
- This reverts commit 53067226137bd8528e6bc26f21edbf98aebe26a9.
- 11:14 AM Revision 7dcb230b (taxeditor): fix transient service
- 10:51 AM Revision b661d598 (cdmlib): ref #6066 rename childNodes to childNodesByTaxon in ClassificationController
- 10:07 AM Revision e5fa5ee8 (cdmlib): ref #6066 add getChildNodes to classification service
- 09:45 AM Revision 03e96dec (taxeditor): also add null check in comparator of nomenclaturalReferenceSelectionDialog
- 09:39 AM bug #6061 (Closed): Add titlecache to nom author search
- 09:37 AM bug #6061 (Resolved): Add titlecache to nom author search
- Applied in changeset taxeditor:commit:taxeditor|28027bed8148feb8c9a3cfdbd7e203e62ad51733.
- 09:32 AM bug #6061: Add titlecache to nom author search
- Andreas Müller wrote:
> With the above example Aaaa/Bbbb I get the following exception when exactly searching for "*... - 09:37 AM Revision 28027bed (taxeditor): fix #6061: add a null check for abbrevTitleCache and titleCache in comparator
09/20/2016
- 11:46 PM bug #6019 (Closed): Link to changeset does not work yet
- this works now in the production version
- 11:44 PM task #6006 (Closed): setup automatic refresh of repositories in Redmine
- No problems so far, the refresh works for all configured repos.
- 11:41 PM bug #6104 (New): install gitolite
- The git repos need an access control and a general management layer.
Gitolite seems to be the best choice: http://... - 06:41 PM bug #6100: Name parser problems
- Hallo Andreas,
korrekter Sonderfall des Brummitt & Powell Standard:
Da R.Br. 3x vorhanden ist, ist der erste R.... - 12:55 PM bug #6100 (In Progress): Name parser problems
- When running the IAPT import (#6026) a lot of names can not be parsed.
For a better overview I split the affected... - 06:36 PM task #6020 (Feedback): Consider replacing custom field 'keywords' by redmine_tags
- could you do the xcheck once again?
- 06:35 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
- This is fixed now.
- 05:53 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
- Da scheint es leider noch Probleme zu geben.
2 Beispiele: http://130.133.70.38/redmine/issues/1420 sollte Tags Fa... - 05:50 PM task #6029: trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
- problem solved in awk script
please test again. - 05:28 PM Revision f58a08fa (cdm-dataportal): fixing minor bug related to taxonomic children block
- 05:18 PM bug #6087: Top level items not sorted in tree of advanced search areaFilter widget
- Please test again. All remaining issues are solved.
- 05:17 PM bug #6087 (Resolved): Top level items not sorted in tree of advanced search areaFilter widget
- Applied in changeset commit:cdm-dataportal|c079337e19b7aa2b7e23a64a78da5085b92029ee.
- 05:17 PM Revision 8f2cbbc0 (cdm-dataportal): ref #6087 resizable area filter widget finetuning
- 05:17 PM Revision c079337e (cdm-dataportal): fix #6087 sorting areas by orderIndex
- 05:16 PM Revision 6dbfb2ec (cdmlib): ref #6087 adding orderINdex to TermDTO
- 04:59 PM feature request #5616: Add the"Open in..." menu to taxon search
- Andreas Müller wrote:
> Better now but still some issues:
>
> * For pure names (not related to taxa) the right cl... - 04:29 PM feature request #5616: Add the"Open in..." menu to taxon search
- Better now but still some issues:
* For pure names (not related to taxa) the right click menu does not show up at ... - 01:45 PM feature request #5616: Add the"Open in..." menu to taxon search
- Fixed in taxeditor:commit:taxeditor|92634d22a080f6de8af639dae12fe771cda64ceb
- 04:59 PM Revision 0e9a6a75 (taxeditor): ref #5616 Generalize evaluation of available CdmViewers
- 04:22 PM Revision 6b605d3b (cdm-dataportal): ref #6087 area filter widget more initial size and resizeable
- 04:00 PM feature request #6103 (New): Refactor name editor to be based on taxon nodes
- Currently the TaxonEditorInput and the name editor are based on taxa. The editor input already stores the taxon node ...
- 03:45 PM discussion #1410: DISCUSS - CDM product names
- CDM Data Portal:
In the documentation, I just use data portal to refer to the connected Drupal instance as a whole (... - 03:41 PM discussion #1410: DISCUSS - CDM product names
- Taxonomic Editor:
For the Documentation, I had changed the designation "EDITor" to "TaxEditor. However, in the user ... - 03:15 PM Revision 016cfa57 (taxeditor): Compare taxon editor input based on taxon instead of taxon node (Revert
- 93c6e0a894d2e4b0c9df6c7c3feff2f20e0b9e38)
- 02:49 PM bug #6101 (Resolved): NPE when having multiple lanugage support disabled
- Applied in changeset taxeditor:commit:taxeditor|db09bbf4cace84076e5fadb241440655b734827f.
- 02:11 PM bug #6101 (Closed): NPE when having multiple lanugage support disabled
- This happens when doing a right-click in the feature term editor
Some GUI elements are not initialised when multi ... - 02:49 PM Revision db09bbf4 (taxeditor): fix #6101: add a check for multilanguage preference
- 02:30 PM feature request #6102 (New): advanced taxon search offers filter on distribution status
- successor of #4497
The area filter in the advanced search needs to be complemented with a filter for the distribut... - 02:26 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
- Katja Luther wrote:
> Andreas Müller wrote:
> > But first revert the already existing changes!!!
>
> It is alrea... - 02:23 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
- Andreas Müller wrote:
> But first revert the already existing changes!!!
It is already reverted see Revision 6e57... - 02:00 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
- But first revert the already existing changes!!!
- 10:24 AM feature request #6041: Change the label of "Set as basionym of homotypical group"
- This needs to be discussed in User Meeting, move it to Release 4.4 and decide then if we change it or not.
- 02:24 PM bug #6061 (Feedback): Add titlecache to nom author search
- With the above example Aaaa/Bbbb I get the following exception when exactly searching for "*B".
Entering "*Bb" works... - 01:51 PM Revision cdbf325e (cdmlib): ref #6066 fix Index out of bound exception
- 01:48 PM bug #6084 (Closed): NPE when opening the checklist editor with no areas selected in preferences
- works fine
- 01:44 PM Revision 92634d22 (taxeditor): ref #5616 Fix class check for bulk editor porperty tester
- - handle UuidAndTitleClache
- 12:23 PM Revision dd2c540b (cdmlib-apps): fix #6035 one more broken character
- 11:45 AM Revision dc4d1922 (cdmlib-apps): fix #6093 including more taxa into algea registry import
- 10:50 AM feature request #6066 (Feedback): Edaphobase DTO for getChildrenTaxaOfId
- 10:49 AM feature request #6066: Edaphobase DTO for getChildrenTaxaOfId
- Getestet unter http://test.e-taxonomy.eu/cdmserver/edaphobase_test/doc/?group=Generic%20REST%20API#!/taxon-node-contr...
- 10:32 AM bug #5967: Adapt default update site to production update site.
- This ticket is difficult to review before the release so we will do the review afterwards.
- 10:13 AM bug #6082: Local managed server in Taxeditor fails during start
- To be honest I am not sure which of the 3 changes was the crucial one and if they are all required.
I only remembe... - 10:05 AM bug #6082 (Closed): Local managed server in Taxeditor fails during start
- Yes this change actually fixes the problem. Howver, it is strange that it is necessary to explicitly name all jars in...
- 10:11 AM bug #6099: Duration of save is increasing
- the time consuming call is CdmStore.getService(ITaxonNodeService.class).merge(taxonNode, true);
- 10:09 AM bug #6099 (Closed): Duration of save is increasing
- Hallo Andreas,
also das Speicherns dauert nach Neuanlegen einer Common names bei Hieracium immer noch unerträglich...
09/19/2016
- 10:14 PM bug #6082 (Resolved): Local managed server in Taxeditor fails during start
- commit:taxeditor|ccf3875f seems to fix the problem.
Please check. - 05:16 PM bug #6082 (Feedback): Local managed server in Taxeditor fails during start
- The changes committed before did apparently not solve the problem.
The latest build made by jenkins still was having... - 03:45 PM bug #6082 (Resolved): Local managed server in Taxeditor fails during start
- Applied in changeset taxeditor:commit:taxeditor|09ab8026ce80a7f76ad3bc250f303aee986c3dab.
- 03:44 PM bug #6082: Local managed server in Taxeditor fails during start
- this seems to be caused by incomplete entries in the `eu.etaxonomy.taxeditor.webapp/build.properties`
- 03:31 PM bug #6082: Local managed server in Taxeditor fails during start
- This does not happen from within the IDE and the eu.etaxonomy.taxeditor.webapp_4.3.0.201609190837.jar of the lastets ...
- 09:50 PM Revision ccf3875f (taxeditor): ref #6082 try to fix dependency issues in managed TaxEditor
- 03:45 PM Revision 09ab8026 (taxeditor): fix #6082 fixing incomplete entries in the eu.etaxonomy.taxeditor.webapp/build.properties
- 02:39 PM Revision cc330739 (taxeditor): i18n for view titles
- 02:39 PM Revision 18fd7dae (taxeditor): Generalize title creation for cdm view parts
- 02:39 PM Revision 93c6e0a8 (taxeditor): Compare taxon editor input based on taxon node instead of taxon
- 02:14 PM Revision 3c85c23f (cdmlib-apps): ref #6097 filter to include algae only - better match pattern
- 02:03 PM bug #6098 (New): Improve session handling for TaxonNavigator and newTaxonNodeWizard
- related to #5607.
It looks like the reason is that the assistant is using the navigator session and the navigator... - 01:45 PM Revision 4ca412d5 (taxeditor): fix #5607: add sec reference to property path solves the problem of not reload the right sec reference
- 01:33 PM bug #6087 (Feedback): Top level items not sorted in tree of advanced search areaFilter widget
- 01:33 PM bug #6087: Top level items not sorted in tree of advanced search areaFilter widget
- The ordering is now alphabetic but not according to the ordering in the vocabular as written in the description (espe...
- 01:33 PM Revision 6a1ec853 (cdmlib-apps): #6097 filter to include algae only
- 01:33 PM Revision 91b69818 (cdmlib-apps): moving TestDatabase back to main - a couple of classes had complie errors
- 01:22 PM Revision 2dab7ea0 (taxeditor): remove System.out.println...
- 01:12 PM bug #6061 (Resolved): Add titlecache to nom author search
- Applied in changeset cdmlib:commit:cdmlib|40dfdbc5479f32292017fadeca45b8424dda4896.
- 01:10 PM bug #6061: Add titlecache to nom author search
- Andreas Müller wrote:
> Deduplication of equals caches looks good now.
>
> Search on titleCache does not yet work... - 01:06 PM bug #6061: Add titlecache to nom author search
- Deduplication of equals caches looks good now.
Search on titleCache does not yet work. E.g. create a Person with n... - 01:12 PM Revision 40dfdbc5 (cdmlib): fix #6061: search in titlecache and nomenclatural titleCache in getUuidAndAbbrevTitleCache
- 01:08 PM bug #6056 (Resolved): Checklist Editor does not close session
- Applied in changeset taxeditor:commit:taxeditor|bfc8d3b4b4853357b40551eca7a283ce68bbe865.
- 01:07 PM Revision bfc8d3b4 (taxeditor): fix #6056: when creating checklisteditorInput don't init session at the beginning, but at the end of constructor
- 10:08 AM Revision c38ba443 (cdmlib): fix failing IPNI Service Test
- 09:29 AM Revision 4764fee3 (cdmlib-apps): removing duplicate repository
- 08:19 AM Revision ceece5d1 (cdmlib-apps): Merge branch 'IAPT'
- Conflicts:
app-import/.gitignore
app-import/pom.xml - 08:16 AM Revision 67432178 (cdmlib-apps): move test classes in app-import
09/17/2016
- 07:52 AM Revision f26bf544 (cdmlib): revert tests
- 07:21 AM Revision 96377298 (cdmlib): Ignore service test
- 07:04 AM Revision 70052603 (cdmlib): ref #6072 test missing entity in webservice
- 12:27 AM Revision 30165a24 (cdmlib-apps): fix #6095 log duplicate registrations during import
09/16/2016
- 11:18 PM Revision 9f53e2a3 (cdmlib): ref #6072 test missing entity in webservice
- 10:35 PM Revision 34bb1837 (cdmlib): ref #6072 set defaults to false and hardcode includeEntity to true for debugging
- 09:11 PM Revision 39e5a6f0 (taxeditor): fix transientServices (2)
- 08:41 PM Revision b6d768b1 (taxeditor): fix transientService
- 07:56 PM Revision 67c1061b (cdmlib): ref #6072 fix signature issue in remote (2nd try)
- 07:31 PM Revision 395b33fe (cdmlib): ref #6072 fix signature issue in remote
- 07:03 PM Revision 35cc0406 (cdmlib): ref #6072 fix compilation issue in IIdentifiableEntityService
- 05:30 PM bug #6072 (Resolved): Implement getTaxonomicGroups for Edaphobase
- Applied in changeset cdmlib:commit:cdmlib|65b68496361721de9312edbb53f02ecb2c77b12b.
- 05:30 PM Revision 8e9785f0 (cdmlib): Cleanup
- 05:30 PM Revision 65b68496 (cdmlib): fix #6072 Implement findIdentifiableEntityByMarkers
- 05:20 PM Revision ac956ff7 (cdmlib-apps): fix #6094 importing 'registration' data into an Extension object
- 04:34 PM bug #5680: Out-of-Memory when editing TaxonInteraction
- Katja Luther wrote:
> another problem with Families in other Floras:
>
>
> creation of a new Families in other ... - 11:35 AM bug #6056: Checklist Editor does not close session
- I found the problem: When disposing the session, the session should be removed from the sessionManager, but the get(o...
- 11:13 AM Revision 73871c73 (cdmlib-apps): ref #6026 SpecimenType = FOSSIL for fossil taxa/names
- 08:19 AM Revision 046ccd06 (cdmlib-apps): ref #6026 more parser improvements and tests
- 12:43 AM Revision 60dffe1d (taxeditor): ref #6089 Fix not compiling operation
- 12:35 AM Revision 98941a6c (taxeditor): ref #6089 Fix failing test and transient service after taxonomicChildrenCount and taxonomicParentCache removal
- 12:29 AM Revision 8571c3d3 (taxeditor): Rename Checklist-Editor -> Distribution-Editor
09/15/2016
- 11:20 PM Revision 77ed5af2 (cdmlib): ref #6089 Remove failing irrelevant test
- 11:13 PM Revision b4db8cea (cdmlib-apps): move test classes in app-import
- 11:09 PM Revision 22abd4ac (cdmlib): ref #6089 Remove all calls and methods for taxonomicChildrenCount and taxonomicParentCache
- 11:08 PM task #6089 (In Progress): Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
- 11:08 PM task #6089 (Closed): Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
- 11:00 PM Revision aa66fec3 (cdmlib): Cleanup; Delete unnecessary test classes.
- 10:22 PM Revision 13ed824e (cdmlib-apps): ref #6026 more parser improvements and tests
- 06:13 PM feature request #6066 (Resolved): Edaphobase DTO for getChildrenTaxaOfId
- Applied in changeset cdmlib:commit:cdmlib|a295b517875ed51a93997bf044543e04b8c2351a.
- 06:13 PM Revision a295b517 (cdmlib): fix #6066 Implement doPageChildNodes with doSynonyms
- 06:08 PM Revision cecffedf (cdmlib): Clean up
- 06:04 PM Revision 971424cc (cdmlib): Adapt failing test in NonViralNameParserImplTest
- 05:51 PM Revision f4ce5055 (cdmlib-apps): ref #6026 improving specimenType parsers: better recognition of 'Coll. something' types
- 05:33 PM Revision 5e52d4ec (cdmlib-apps): ref #6026 solving problems in date and specimenType parsers, also implementing tests
- 04:52 PM bug #6088 (Closed): New reproducable multiple representations exception for name relationships
- What I did:
* Goto name bulk editor and create 2 new names: *Related name One* and *Related name Two*.
* Make R... - 03:33 PM Revision d74b5cdc (cdmlib): ref #6086 solving the problems in the java-script of the web application monitor widget:
- - chunk information: number rounded and label renamed
- Percentage number rounding fixed - 03:10 PM Revision 3273ef7c (cdmlib): ref #6086 fix failing test
- 02:40 PM bug #6086: Percentage value in ProgressMonitor accuratly rounded
- Can you please check if this fixes the problem?
- 02:38 PM bug #6086: Percentage value in ProgressMonitor accuratly rounded
- Experience shows (see class DefaultProgressMonitorTest) that rounding errors mostly appear when SubProgressMonitors a...
- 02:28 PM bug #6086: Percentage value in ProgressMonitor accuratly rounded
- Ceil is not the correct method, use round instead, otherwise the result is only rounded into one direction.
- 11:55 AM bug #6086 (Closed): Percentage value in ProgressMonitor accuratly rounded
- The percentage value on the progress of the indexing process is often reported as 99,99% when the job is completet.
... - 02:27 PM Revision 6f59693f (cdmlib): rel #6086 Improve rounding for progress monitor
- * fix error in rounding by using round not ceil
* add method for user defined scaled rounding - 02:23 PM Revision 87348c2d (taxeditor): fix #5702: filter for current name in name details view if select new name
- 02:21 PM Revision 504fc7ef (cdmlib): some cleanup
- 02:04 PM Revision ab85455e (cdmlib-apps): ref #6035 adding more character fixed and adding source referenence for all names
- 01:54 PM Revision 398b9c0f (taxeditor): ref #5837: if nomenclatural titleCache and titleCache are equal only one is shown in selection dialog
- 01:26 PM bug #6061: Add titlecache to nom author search
- now searching with * at the beginning of the search pattern searches on abbrevTitleCache and titleCache
- 09:59 AM bug #6061: Add titlecache to nom author search
- Katja Luther wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Katja Luther wrote:
> > > > ... but the... - 09:25 AM bug #6061: Add titlecache to nom author search
- Andreas Müller wrote:
> Search on titleCache with * at the beginning (additionally to the nom.title) still does not ... - 09:12 AM bug #6061: Add titlecache to nom author search
- Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > ... but the object already selected does... - 08:55 AM bug #6061: Add titlecache to nom author search
- Andreas Müller wrote:
> Katja Luther wrote:
> > ... but the object already selected does not show up in the selecti... - 01:22 PM Revision d00e4ab1 (taxeditor): ref 6061: using * at the beginning of search pattern triggers a search on abbrevTitleCache and titleCache
- 01:20 PM feature request #5969: Implement CdmPreference reading for database preferences
- there was no check whether the preference is already in DB, now if the preference could not find in DB the local one ...
- 11:50 AM feature request #5969 (Feedback): Implement CdmPreference reading for database preferences
- When trying to open Preferences-Taxonomic-NomenclaturalCode I got an NPE:
~~~
login : admin
editor version : 4.3... - 01:18 PM Revision 4625a011 (taxeditor): ref #5969: check if there is a NC preference in db if not use the local NC preference
- 12:26 PM bug #6087 (Resolved): Top level items not sorted in tree of advanced search areaFilter widget
- Applied in changeset commit:cdm-dataportal|fdf52d6a1031775b9ec229df88bb0a84ad54649a.
- 12:24 PM bug #6087 (Closed): Top level items not sorted in tree of advanced search areaFilter widget
ich sehe gerade, dass zumindest bei Cuba http://portal.cybertaxonomy.org/flora-cuba/cdm_dataportal/search die Areal...- 12:26 PM Revision fdf52d6a (cdm-dataportal): fix #6087 areaFilter item sorting fixed
- 12:01 PM task #6029: trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
- http://130.133.70.38/redmine/issues/226 still has status closed instead of rejected, though it was a won't fix (http...
- 10:44 AM task #6029 (Feedback): trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
- I implemented a repair script (attached).
Please can you (a.mueller) xcheck to confirm that the fix is working
... - 11:53 AM Revision 288cde13 (taxeditor): fix #5874: display of infrageneric epithet are different for zoological and botanical names
- 10:41 AM Revision 542640fa (cdmlib): fix #5837: search on abbrevTitleCache instead of abbrev title
- 10:40 AM Revision d33f8978 (taxeditor): ref #6061: remove the current selection as filter in nomenclatural author selection dialog
- 08:49 AM Revision 6e572e21 (taxeditor): ref #6041: revert the changes and wait for the decision of the user meeting
09/14/2016
- 10:05 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
- 1. NOTE: This plugin seems not to support 'Bulk edit' :(
2. Updating the migration scripts
- 04:06 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
- migration scripts are ready, see attachments
- 05:52 PM bug #6054 (Closed): classification breadcrumb navigation broken in IE and MS Edge
- I tested with IE11 on test with cuba and it works correctly. So I guess it is fixed.
- 05:46 PM bug #6061: Add titlecache to nom author search
- Search on titleCache with * at the beginning (additionally to the nom.title) still does not work. Is this difficult t...
- 05:41 PM bug #6061: Add titlecache to nom author search
- Ordering and dot search seem to work well now.
- 05:40 PM bug #6061: Add titlecache to nom author search
- Katja Luther wrote:
> ... but the object already selected does not show up in the selection dialog. This is the same... - 05:35 PM bug #6061 (Feedback): Add titlecache to nom author search
- If titleCache is same as nomTitle both versions are still shown. See note-#2
- 12:31 PM bug #6061: Add titlecache to nom author search
- The ordering works now on the abbrev title and the search works for strings with a point at the end, but the object a...
- 05:11 PM bug #6085 (New): Use lucene auto suggest functionality for improved auto suggest
- Check if lucene auto-suggest functionality can be used. Currently we only use standard freetext search which leads e....
- 05:11 PM Revision 1de87368 (cdmlib): correcting erroneous commit
- 04:59 PM feature request #5890: Implement auto-suggest for data portal
- Andreas Müller wrote:
> Also I do not understand why the flag to switch on auto-completion is put to Settings - Gene... - 04:21 PM feature request #5890: Implement auto-suggest for data portal
- Also I do not understand why the flag to switch on auto-completion is put to Settings - General - CdmServer - FreeTex...
- 04:18 PM feature request #5890 (Feedback): Implement auto-suggest for data portal
- When trying to run on http://test.e-taxonomy.eu/dataportal/preview/flora-cuba/ and searching for "Barler" I got an po...
- 03:42 PM Revision ff9da83e (taxeditor): Minor language correction
- 03:24 PM bug #6062: NPE in RefencingObjects for TaxonNameDescription
- The NameDescription NPE is not thrown anymore but I would like to first wait until the regression in #5616 is fixed u...
- 09:25 AM bug #6062 (Resolved): NPE in RefencingObjects for TaxonNameDescription
- Applied in changeset taxeditor:commit:taxeditor|f3fb72fdaf40e993eeec1f606bfd88caeba06898.
- 09:18 AM bug #6062: NPE in RefencingObjects for TaxonNameDescription
- I could only reproduce the last mentioned NPE once because I had not selected any areas. After selecting areas I coul...
- 08:04 AM bug #6062: NPE in RefencingObjects for TaxonNameDescription
- I added a property tester to check if the item can be shown depending on whether or not there is a bulk editor for th...
- 03:13 PM feature request #6059 (Closed): Save expand state more individually
- Both seem to work fine, subsections as well as supplemental data view.
We may open new tickets for other views if ... - 02:48 PM feature request #5616 (Feedback): Add the"Open in..." menu to taxon search
- Now it does not offer bulkeditor at all anymore, not for pure names, not for orphaned taxa and not for ordinary taxa/...
- 12:04 PM bug #6084 (Resolved): NPE when opening the checklist editor with no areas selected in preferences
- Applied in changeset taxeditor:commit:taxeditor|6ac3c9c18cc95fd462d8e2ce82dcb0904cce7c6e.
the problem was the not ... - 09:14 AM bug #6084 (Closed): NPE when opening the checklist editor with no areas selected in preferences
- You can reproduce this by deleting the preferences for the checklist editor in `.cdmLibrary/.metadata/.plugins/org.ec...
- 12:04 PM Revision 6ac3c9c1 (taxeditor): fix #6084: check if areas are selected in preferences before open the distribution editor
- 10:33 AM bug #6063: redmine inheritable issue categories
- The latest patch inherit_cats_2.5.1.stable.13138.patch.gz can not be applied to the version 3.3.0
- 10:05 AM feature request #6076: Specimen biocase search should work on observations
- ... should work on all types of "RecordBasis" (wenn es um Importe oder Specimeneingaben geht, AlgaTerra hat z.B. Liv...
- 07:11 AM Revision f3fb72fd (taxeditor): fix #6062 Add property tester for "Open in..." bulk editor menu items
- - moved isGroupEditor property test to bulk editor plugin
- 07:07 AM Revision 75271240 (taxeditor): Trim code
- 06:28 AM Revision be092848 (taxeditor): Organize imports
09/13/2016
- 06:43 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
- During installation, more specifically at `bundle install` the following information is printed out.
This might be i... - 06:25 PM Revision 28d2e75f (cdmlib): gitignore
- 06:12 PM Revision 90fe4c79 (cdm-dataportal): fix #5918
- 05:54 PM Revision 751327d2 (cdm-dataportal): fixing bug in taxon search area filter widget + improvement
- 05:04 PM Revision efc9727a (taxeditor): Trim code
- 04:48 PM Revision 53183543 (cdmlib): fix #4497 solving problem with status parameter in taxon search
- 04:43 PM Revision efa372e9 (cdm-dataportal): fix #4497 simple exclusion of all areas with absent status from taxon search
- 04:25 PM bug #6082 (Closed): Local managed server in Taxeditor fails during start
~~~~
login :
editor version : 4.3.0.201609131149
server : /
schema version :
os : Linux 3.19.0-59-generi...- 04:17 PM bug #6075: harmonize ' Enable auto-suggest' option with existing code
- Sorry I confused this setting, it is on the taxon search fields.
I am correcting the issue description ... - 01:54 PM bug #6075 (Closed): harmonize ' Enable auto-suggest' option with existing code
- # 1)
The `[] Enable auto-suggest for taxon search` is currently in the freetext index settings.
This option sh... - 03:37 PM bug #6062 (In Progress): NPE in RefencingObjects for TaxonNameDescription
- 03:23 PM feature request #6081 (New): [Specimen Search] Import report should be saved
- The import report should be saved on an accessible place. So the user can reproduce what was imported correctly and w...
- 03:20 PM feature request #6080 (New): [Specimen Search] TitleCache should be configurable
- It should be possible to configure the order and the content of the titlecache
- 03:17 PM bug #6079 (New): [Specimen Search] Restructure the table of search result
- The table should be restructured:
- the protocol is not needed
- important are scientific name, catalogue number, l... - 03:09 PM bug #6078 (Resolved): import of references in specimen search
- The import of references are missing in GBIF and biocase import
- 03:07 PM bug #6077 (Closed): Import of gathering images
- The gathering images are imported if the import comes from a bioase provider, for a Darwin Core Archive provider it d...
- 03:05 PM feature request #6076 (Closed): Specimen biocase search should work on observations
- Actually the specimen biocase search only works on Specimen, it should also search for observations.
- 01:48 PM feature request #5969 (Resolved): Implement CdmPreference reading for database preferences
- first implementation added.
- 01:42 PM Revision 98bd6727 (taxeditor): fix #5874: infrageneric epithet is visible only for species not for infraspecific names
- 01:35 PM Revision 4e365f81 (taxeditor): ref #5616 Fix NPE for opening synonyms from SearchResult view
- 01:35 PM feature request #5616 (Resolved): Add the"Open in..." menu to taxon search
- Applied in changeset taxeditor:commit:taxeditor|30afcea01068a7e0dcd2bde6b9a5f28e4bbcdd6f.
- 01:11 PM Revision 30afcea0 (taxeditor): fix #5616 Add check for orphaned taxa to CdmViewer context menu
- - removed default handler for this
- 01:09 PM Revision c1fd631d (taxeditor): fix #5927: deletion of default language is possible if more than one representation is available
- 12:55 PM bug #6054: classification breadcrumb navigation broken in IE and MS Edge
- Please can you confirm that this is fixed?
- 12:47 PM bug #6054 (Resolved): classification breadcrumb navigation broken in IE and MS Edge
- Applied in changeset commit:cdm-dataportal|09edee9ae258bebe52d37c98f000257c365a8768.
- 12:45 PM Revision c084fb48 (cdm-dataportal): fixing jQuery incompatibility IE >= 9 and Edge
- 12:42 PM Revision b362c60f (cdm-dataportal): fixing jQuery incompatibility IE >= 9 and Edge
- 12:31 PM Revision 09edee9a (cdm-dataportal): fix #6054 removing rotation which is unused anyway - fixes display bug in IE and Edge
- 11:57 AM Revision b9801dc0 (taxeditor): ref #5969: get the preference NC from db when initialize preference store and save the changes in db
- 11:48 AM Revision 92e52208 (cdmlib): ref #5969: add PreferenceService to applicationController
- 11:37 AM feature request #3573 (In Progress): Improve EDITOR import UI configuration panel
- 11:28 AM Revision 4ee2ca3b (cdmlib): Remove duplicate method
- 11:28 AM feature request #6059 (Resolved): Save expand state more individually
- Applied in changeset taxeditor:commit:taxeditor|38eaa3c8c34ceeb65e29b7647a4bba1696e7ed4e.
- 10:13 AM feature request #6059 (In Progress): Save expand state more individually
- 11:28 AM Revision 38eaa3c8 (taxeditor): fix #6059 Save expand state for details view, supplemental view
- including sub sections
- 11:28 AM Revision 5a073138 (taxeditor): ref #6059 Save expand state for supplemental data view
- 11:28 AM Revision 871e0d37 (taxeditor): Do not show taxon-specific deletion options when deleting
- classifications
- 11:28 AM Revision cecbda95 (taxeditor): Clean up and refactoring
- - Delete unused class
- Rename class to avoid duplicate name - 10:38 AM task #6074 (New): test for the name catalogue service
- the name catalogue has failed in the past an no one noticed it: #5860
We already have tests for the catalogue (htt... - 10:28 AM bug #6057 (Closed): Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
- this works now. Thank you!
- 10:26 AM bug #6060 (Closed): Name parser fails parsing author names with - U+002D HYPHEN-MINUS
- this works now. Thank you.
- 12:12 AM Revision 776a6d47 (cdmlib-apps): ref #6026 'Coll. Lange-Bertalot..' as titleCache of Collection
- 12:07 AM Revision 74d84f79 (cdmlib-apps): ref #6026 using genera as higher taxon for species
09/12/2016
- 05:17 PM bug #6073 (Resolved): Fix groupByHigherTaxon webservice
- 05:11 PM bug #6073 (Closed): Fix groupByHigherTaxon webservice
- see #5957
- 05:07 PM bug #6072 (Closed): Implement getTaxonomicGroups for Edaphobase
- Gibt eine Liste (id + Name) mit allen taxonomischen Großgruppen zurück. Beispielsweise Collembola
- 05:00 PM bug #6071 (Closed): Handle Taxonomische Großgruppen correctly in Edaphobase
* Thema Taxonomische Großgruppen/Funktion getTaxonomicGroups
* Das ist bei uns keine extra Ebene sondern eine Eig...- 04:42 PM Revision 6f52f3a9 (cdmlib): rel #5957 improve tests for groupTaxaByHigherTaxon
- 04:25 PM Revision 96c10a88 (cdmlib): fix #5957 fix IndexOutOfBound exception and some other improvements for groupByHigherTaxon
- 04:23 PM Revision d39647ca (cdmlib): minor
- 03:34 PM Revision 658c4382 (cdmlib-apps): fix #6068
- 03:28 PM Revision 1ec5d31b (cdmlib): better percentage values from Progressmonitor
- 03:03 PM Revision bdf849a5 (cdmlib-apps): ref #6026 3 more character replacement rule
- 03:01 PM Revision 8b4697e6 (taxeditor): fix #5837: fix the filter of the selection dialog of nomenclatural reference and author
- 03:00 PM bug #6061 (Resolved): Add titlecache to nom author search
- Applied in changeset cdmlib:commit:cdmlib|bdac48c7613040ed609183f74552333ef1fb626c.
- 03:00 PM Revision 98838827 (cdmlib): fix #6061: search for titlecache if abbrev title is empty
- 03:00 PM Revision bdac48c7 (cdmlib): fix #6061: smaller changes
- 02:52 PM feature request #6043: Name export for JACQ
- Select for the export of accepted taxa:
~~~ sql
SELECT tnb.uuid,
tnb.genusOrUninomial as genus, tnb.specific... - 02:36 PM Revision b67e063e (cdmlib-apps): ref #6026 fixing rank
- 02:22 PM Revision 9e8673a2 (taxeditor): ref #5801 Fix several NPE when editing/creating concept relations from
- active bulk editor
- 02:21 PM Revision c2784f55 (taxeditor): ref #5801 Leave concept view active when editing in details/supplemental
- view
- 02:20 PM Revision 9c419e9e (taxeditor): ref #5801 Add IUndoContext to bulk editor
- 01:45 PM feature request #6070 (New): Implement IPNI style name export
- This format is required e.g. by JACQ. For an example see #6043
.
This export should be more generic:
* write in... - 01:37 PM Revision 8c06c81b (cdmlib): ref #6032 Remove test for rank as mentioned in ticket
- 01:37 PM bug #6032 (Rejected): Name parser support for hybrid ranks
- 01:34 PM bug #6032 (Closed): Name parser support for hybrid ranks
- 12:36 PM Revision 945f3ef3 (cdmlib-apps): ref #6026 fixing bug in publication regex pattern
- 12:08 PM Revision 438dd662 (cdmlib-apps): ref #6026 speedup of import and fixing a minor bug
- - speedup by special handling for hardly to parse reference
- minor bug during camparison of basionym names - 11:33 AM Revision d918758a (cdmlib-apps): ref #6026 keepgin deteced ref type in case of 'Vorabdruck'
- 10:29 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
- Andreas Müller wrote:
> So it is you who deleted data in the meanwhile?
>
Exaclty, the old data was deleted when ... - 10:18 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
- So it is you who deleted data in the meanwhile?
However, the general transaction problem exist. No matter if an ob... - 10:04 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
- Henning was about to close some views/editors when this happened.
I think that this exception related to the fresh... - 09:50 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
- The relevant code is at CdmGenericDaoImpl.initializeCollection(UUID ownerUuid, ...) line 784
~~~ java
CdmBase ... - 09:23 AM bug #6067 (New): CdmEagerLoadingException after having multiple editors open for ~4 hours
- Hallo,
nachdem ich über 40 Fenster über lange Zeit (mehrere Stunden) offen hatte, bekam ich die Fehlermeldungen
VG
...
09/09/2016
- 05:06 PM feature request #6065 (In Progress): Edaphobase DTO for getTaxonById
- 05:02 PM feature request #6065 (Closed): Edaphobase DTO for getTaxonById
- Gibt das Taxon-Objekt zu einer ID zurück. Das Taxon muss mindestens enthalten: Name, Namensbestandteile, Rang, Typ, K...
- 05:06 PM feature request #6066 (Closed): Edaphobase DTO for getChildrenTaxaOfId
- Gibt alles zurück, was direkt unter dem angegebenen Taxon im Baum hängt (Kindtaxa und Synonyme). Der Eintrag besteht ...
- 04:57 PM Revision 1496a7e6 (cdmlib-apps): ref #6026 NameTypes (with minor problems)
- 04:38 PM Revision 72831c0c (cdmlib): Add Vorabdr. to parsable volume
- 04:21 PM bug #6064 (In Progress): Edaphobase problems with webservices
- * /portal/taxon/{uuid}
* Synonymbeziehungen nicht erkennbar (valide Taxa der Synonyme und Synonyme der validen Taxa... - 03:57 PM bug #6063 (New): redmine inheritable issue categories
- see
* http://www.redmine.org/issues/11898 (Patch)
* http://www.redmine.org/issues/5358 (Issue)
On how to appl... - 02:14 PM bug #6062: NPE in RefencingObjects for TaxonNameDescription
- Found in nightly build 4.3.
Please check also for other types. I checked HomotypicalGroups and it was ok. For Taxo... - 02:05 PM bug #6062 (Closed): NPE in RefencingObjects for TaxonNameDescription
- Currently the referencing objects view offers "Open in bulk editor" for objects of type TaxonNameDescription (created...
- 01:50 PM bug #6061: Add titlecache to nom author search
- Some more critical issues:
1. Ordering works on titleCache now but one would expect it to work on nomCache. E.g. i... - 01:13 PM bug #6061 (Feedback): Add titlecache to nom author search
- The fix generally works, but we should further improve it.
1. If nomTitleCache and titleCache is equal we should s... - 01:01 PM bug #6061 (Closed): Add titlecache to nom author search
- split from #5828
1 additional improvement would be to additionally add the titleCache in brackets after the abbrev... - 01:34 PM Revision c9d59f89 (cdmlib): minor
- 01:20 PM Revision b6ef7dd5 (cdmlib): minor
- 12:58 PM Revision 3fea1fb7 (cdmlib): smaller changes for importing nom. reference in normal explicit excel import
- 12:30 PM Revision 24617f27 (cdmlib): normal explicit excel import: add reference to name import
- 12:21 PM Revision 962dc999 (cdmlib-apps): ref #6026 FieldUnit locality working
- 11:51 AM Revision 928817b7 (cdmlib-apps): removing unused repo from the pom.xml (was used for yourkit)
- 11:37 AM Revision 42792f6a (cdmlib): Add javadoc for languages
- 09:46 AM task #6006: setup automatic refresh of repositories in Redmine
- I tested the hook, it works!
- 08:27 AM task #6006: setup automatic refresh of repositories in Redmine
- the SVN is no longer synced with the git repositories. The svn repos which have been migrated to git are only archive...
- 09:20 AM Revision 7a2e883f (cdmlib-apps): minor
- 09:05 AM Revision f9ef0c0c (cdmlib-apps): fix #5893: fauna europaea reference import with more atomized data
- 09:05 AM Revision bcc15deb (cdmlib-apps): #5448 Imporve name check for multiple ex authors
- 09:05 AM Revision 38b8e920 (cdmlib-apps): #5448 Improve import of families
- - clone families for checklist
- load in related objects method - 09:05 AM Revision 307bc7da (cdmlib-apps): #5448 Change abbrev label of unranked infraspecfic rank before importing
- 09:05 AM Revision d27fae52 (cdmlib-apps): ref #5448 Reduce multiple ex authors to only two
- 09:05 AM Revision abf1c13b (cdmlib-apps): ref #5448 Reduce multiple ex authors to only two
- 09:05 AM Revision cf536939 (cdmlib-apps): adaption to specimen import changes
- 09:05 AM Revision 5c81a80c (cdmlib-apps): #5448 Fix import of hybrid formula
- 09:05 AM Revision 19ed9439 (cdmlib-apps): ref #5448 code cleanup
- 09:05 AM Revision 4cb8b437 (cdmlib-apps): #5448 Refactor hybrid name import/check
- 09:05 AM Revision 817f2688 (cdmlib-apps): #5448 Use SEQNUM as id column
- - enhance hybrid name check
- 09:05 AM Revision 62c9db2c (cdmlib-apps): #5448 Import genus hybrid formulas
- 09:05 AM Revision 09549132 (cdmlib-apps): #5448 Support corner cases
- - SPI and KMB as ranks
- nomenclatural status type
- HYB name checking - 09:05 AM Revision f39b51ab (cdmlib-apps): #5448 Handle rank "SPI"
- 09:05 AM Revision 1677827c (cdmlib-apps): #5448 Import non-CDM ranks
- 09:05 AM Revision 20fc4e0b (cdmlib-apps): #5448 Remove non-exisiting hybrid category
- 09:05 AM Revision 933eee97 (cdmlib-apps): #5448 Import HYB 'nf'
- 09:05 AM Revision 1d5daa79 (cdmlib-apps): #5448 Import rank "SAM"
- 09:05 AM Revision 48003e9f (cdmlib-apps): #6000 Use new CASUAL Method instead of deprecated INTRODUCED_ADVENTITIOUS
- 09:05 AM Revision 42c9c152 (cdmlib-apps): #5448 Add "distinct" to SQL query as family table contains duplicate
- rows
- 09:05 AM Revision a2c424c2 (cdmlib-apps): #5488 Improve import of family taxa
- - Load families in related object methods
- 09:05 AM Revision 4af5ff7a (cdmlib-apps): #5448 Fix hybrid import where specific epithets are not from same genus
- 09:05 AM Revision 6dee9f63 (cdmlib-apps): #5448 Add family rank
- 09:05 AM Revision 71b0a23c (cdmlib-apps): #5448 Fix hybrid import where specific epithets are not from same genus
- 08:59 AM Revision 72bde1d7 (cdmlib-apps): ref #6026 handling 'Vorabdrucke' as Book Volume/Issue
- 07:36 AM Revision 9ee079fa (cdmlib-apps): ref #6026 support for making statistics on parsed type data - typo
09/08/2016
- 09:58 PM task #1606: Restrict filtered selection of in references to the respective reference types
- This might still be an interesting open issue. Discuss with users.
- 09:56 PM feature request #1362: Version number should be located at one place
- Is this still an open issue?
- 04:51 PM bug #6060 (Resolved): Name parser fails parsing author names with - U+002D HYPHEN-MINUS
- Applied in changeset commit:cdmlib|9d20b400f4dfa58e78a27a00e5215ea2d563273d.
- 04:22 PM bug #6060 (Closed): Name parser fails parsing author names with - U+002D HYPHEN-MINUS
- For example:
* Thamniopsis stenodictyon (Sehnem) Oliveira-e-Silva & O.Yano (FAILS)
* Thamniopsis stenodictyon (Se... - 04:51 PM Revision 9d20b400 (cdmlib): fix #6060 parse author with -e-
- 04:39 PM Revision 8a56246d (cdmlib): rel #6057 further improvements for authors with accent grave
- 04:24 PM bug #6057: Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
- Moved "hyphen" case to new ticekt #6060
- 03:43 PM bug #6057 (Resolved): Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
- Applied in changeset cdmlib:commit:cdmlib|d24cf23ca4d303a0b8a29a101097f6bd30cd022d.
- 03:40 PM Revision c167aac2 (cdmlib-apps): ref #6026 importing Basionyms
- 02:47 PM Revision 9cc443ab (cdmlib-apps): ref #6026 support for making statistics on parsed type data:
- Type parsing statistics:
- Type: field 'Type' can not be parsed (parse problem of whole typeString)
- Type: fielUni... - 02:38 PM Revision 1968849d (cdmlib-apps): ref #6026 better type parsing
- - FieldUnit: collector, fieldnumber, date
- Specimen: Collection, Subcollection, accession number
Does not work in ... - 02:21 PM Revision d24cf23c (cdmlib): fix #6057 Accent Graph in author parser
- 01:50 PM Revision c023c9af (taxeditor): Fix NPE in TermLabelProvider
- 11:09 AM feature request #6059 (Closed): Save expand state more individually
- copied from #5953:
Seems to work well for all top level sections of the details view.
We may also want to have ... - 11:08 AM bug #6049 (Closed): Improve (area) filter handling for selection dialogs
- created new issue for remainig issues -> #6058
- 11:07 AM feature request #6058 (Closed): Store NamedArea dialog filters more individually
- copied from #6049 :
Remembering the old filters works well even when changing the datasource or reopening the edit... - 10:40 AM Revision 344a62cd (cdmlib): ref #4260 Added test for 0 parameter query
- 09:43 AM feature request #4488: Specimen data points in map should show FieldUnit information
- @Andreas K.: Could the first solution be implemented by the map service itself?
- 09:31 AM feature request #4488: Specimen data points in map should show FieldUnit information
- moving valid Campanula ticket to Unassigned milestone
- 09:36 AM task #3249: [DISCUSS] Free text search for specimen details
- moving valid Campanula ticket to Unassigned milestone
09/07/2016
- 11:37 PM bug #5982 (Closed): editing the protected titleCache set sometimes the focus to the name editor
- Seems to work well and can be closed
- 11:28 PM bug #6049: Improve (area) filter handling for selection dialogs
- Remembering the old filters works well even when changing the datasource or reopening the editor.
Not yet fully co... - 04:28 PM bug #5967 (Resolved): Adapt default update site to production update site.
- 07:15 AM bug #5967: Adapt default update site to production update site.
- to check if it works you have to delete `eu.etaxonomy.taxeditor.store.prefs` in folder `.cdmLibrary/.metadata/.plugin...
- 03:54 PM bug #6057 (Closed): Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
- For example:
* Sedum plicatum O`Brian (FAILS)
* Sedum plicatum O'Brian (OK)
This important for the Algae Regis... - 03:47 PM Revision 26334359 (taxeditor): fix #5801 Fix exceptions during selection propagation for concept
- relationship view
- the internal model of the view has changed from a list of
TaxonRelationShip objects to a Map<Ta... - 02:56 PM Revision 64c0db54 (cdmlib-apps): ref #6026 two more date parsing rules
- 02:02 PM feature request #5616 (Feedback): Add the"Open in..." menu to taxon search
- Works fine for pure names and taxon nodes.
For orphaned taxa it should not show allow the option "open in name edi... - 01:45 PM bug #6056 (Closed): Checklist Editor does not close session
- After closing the Checklist editor the session is still visible in the session view but shouldn't.
- 01:01 PM feature request #6055 (New): Implement ordering for CdmViewer menu items
- 12:20 PM Revision adff9167 (cdmlib-apps): ref #6026 type parsing
- - parsing of specimen types
- 12:10 PM bug #6030 (Closed): Name parser support for genus hybrids
- works fine
- 11:33 AM Revision 86a8b79e (taxeditor): Add fallback label and icon in specimen editor
- 11:23 AM task #6004 (Closed): Fix wiki page Roadmap
- This looks good to me. the result looks very similar to what we had before and to have the status also available is a...
- 11:15 AM Revision 68725b19 (taxeditor): Rename derivative editor to "Specimen Editor"
- 11:15 AM Revision 5b1589bb (taxeditor): fix #5967 Fix version check for stable release
- 11:11 AM Revision e13674c3 (cdmlib): ref #6045 some comments and clean up
- 09:39 AM Revision ddc7054f (cdmlib): minor changes in excel import
- 08:28 AM bug #6038 (Rejected): [Redmine] NoScript detects CrossSiteScritping for Redmine
- After playing around a little it seems like it the copied link only works if opened from within a Redmine issue. If c...
- 07:14 AM bug #6045 (Closed): NPE when using TaxonNaturalComparator
09/06/2016
- 03:39 PM Revision 3a824e7f (cdm-vaadin): ref #5458 Redesign settings diaolog to support taxon tree
- 12:29 PM Revision d85cfdf3 (taxeditor): fix #5759 remove all switches for remoting and standalone
- 12:13 PM Revision f465df63 (cdmlib-apps): ref #6026 publication date parsing completed
- 09:48 AM Revision a14dcf4e (cdmlib): adding missing test file for tropicos import
- 08:58 AM Revision c83f34f1 (cdmlib-apps): ref #6009 improved plublication date parsing
- - all dates recognized
- all months recognized
- special time spans not implemented (Winter, Fall, April-June, ... - 08:55 AM Revision bde99bfd (cdmlib-apps): ref #6009 improved plublication date parsing
09/05/2016
- 07:32 PM Revision aab82329 (cdm-vaadin): ref #5458 Major performance increase
- - refactored term loading
- cached loaded terms
- removed unnecessary methods and generics
- reduces warnings - 04:45 PM Revision a6e7790d (cdm-vaadin): ref #5458 Add taxon tree instead of combo box
- 03:24 PM Revision 5b83c25f (cdm-dataportal): adding phpStorm logo to site
- 11:02 AM Revision 6ec7fb0b (cdm-vaadin): ref #5458 Adapt settings view to tree node selection
- 10:07 AM Revision 33a5d14e (cdm-vaadin): ref #5458 temp commit add tree to distribution selection
- 10:04 AM bug #6054 (Closed): classification breadcrumb navigation broken in IE and MS Edge
- clicking the classification breadcrumb causes the children list to appear rotated by 90° in IE and MS Edge
- 09:24 AM bug #6045: NPE when using TaxonNaturalComparator
- please review, the sort order should depend on the sortindex of the taxonnode
- 08:57 AM bug #6053 (New): Improve web site security
- Check EDIT Websites with https://observatory.mozilla.org/ and decide on actions that need to be taken
Sites to che...
09/04/2016
- 09:13 PM Revision 393d6651 (cdmlib): extend excel import to cover simple tropicos data
- 09:03 PM Revision 40e3002f (taxeditor): if calling excel import on a taxonnode this is used as parent taxon
09/03/2016
09/02/2016
- 11:42 PM feature request #6041 (Feedback): Change the label of "Set as basionym of homotypical group"
- I am not convinced yet that this is correct. Therefore I think we need to discuss this during the next user meeting.
- 02:41 PM bug #6046 (Duplicate): Save button not enabled after factual data delete
- 02:11 PM bug #6052 (New): Implement Comparator for Type Designations
- Currently the order of type designations is unordered. We should implement a comparator to have a fixed order.
Som... - 01:21 PM bug #6032 (Feedback): Name parser support for hybrid ranks
- >non-hybrids: "Berberis aggregata aggregata" with rank Variety is parsed as "Berberis aggregata var. aggregata"
As... - 01:17 PM Revision a7d23c68 (cdmlib): ref #6032 test name parser support for hybrid ranks and non-hybrids
- 01:17 PM Revision 35f41ddb (cdmlib): ref #6030 Add additional test for genus hybrid formula parsing
- 12:37 PM Revision a6a29f0b (cdmlib): minor
- 12:36 PM Revision 2f11ae8e (cdmlib): fix #5893: set parse reference public to use it in fauna europaea import
- 11:54 AM Revision 71614d18 (cdmlib-apps): fix #5893: fauna europaea reference import with more atomized data
- 11:49 AM bug #6030 (Resolved): Name parser support for genus hybrids
- Applied in changeset edit-svn|r28914.
- 11:47 AM Revision eb43f782 (cdmlib): fix #6030 Parse Genus hybrid formulas correctly
- 10:36 AM bug #6049: Improve (area) filter handling for selection dialogs
- Check: what happens if datasource is changed
- 09:29 AM bug #6049 (Resolved): Improve (area) filter handling for selection dialogs
- Applied in changeset edit-svn|r28913.
- 09:55 AM bug #6051 (New): Add toggle button for simple details view for names
- to switch between simple and advanced view with just one click we need a toggle button like in media details view
- 09:53 AM feature request #6050 (Closed): provide the possibility to choose the fields of the simple details view for names
- It should be possible to choose the displayed fields of the name details view in the preferences.
- 08:03 AM Revision 0a1dde23 (taxeditor): fix #6049 Store vocabulary filters for NamedArea selection dialogs in
- preferences
- when passing pre-selected vocabularies programmatically these will
ignore the preferences and will alw...
09/01/2016
- 05:02 PM bug #6049 (In Progress): Improve (area) filter handling for selection dialogs
- 01:42 PM bug #6049 (Closed): Improve (area) filter handling for selection dialogs
- Hallo,
vermutlich finde ich nur die entsprechende Preferences Einstellung nicht.
Wenn ich in der Kuba Checklist... - 04:59 PM Revision 1064ad91 (cdmlib-apps): #5448 Imporve name check for multiple ex authors
- 04:59 PM Revision b0033901 (cdmlib-apps): #5448 Improve import of families
- - clone families for checklist
- load in related objects method - 01:27 PM Revision 0a2d8d77 (cdmlib-apps): #5448 Change abbrev label of unranked infraspecfic rank before importing
- 11:48 AM bug #6046 (Duplicate): Save button not enabled after factual data delete
- If factual data are deleted the save button is not enabled but should.
- 11:31 AM Revision 853dcb0b (taxeditor): i18n for SearchManager
- 11:31 AM Revision 8a5b5a5a (taxeditor): Increase width of label in remote login dialog
- 08:47 AM Revision f81b22b6 (cdm-vaadin): ref #5458 Escape SQL control character '
- 07:34 AM bug #6045 (Resolved): NPE when using TaxonNaturalComparator
- Applied in changeset edit-svn|r28904.
08/31/2016
- 05:46 PM Revision 97b2fabe (cdmlib): ref #6045 Add test for getAncestor()
- 02:52 PM Revision 255a28af (cdmlib): fix #6045: fixing the NaturalOrderComparator and complete the test
- 12:27 PM Revision d4432136 (cdmlib-apps): ref #5448 Reduce multiple ex authors to only two
08/30/2016
- 04:23 PM Revision 47bab95f (cdmlib-apps): ref #5448 Reduce multiple ex authors to only two
- 04:11 PM bug #6045: NPE when using TaxonNaturalComparator
- The NPE should be fixed with the attached revision. But I am not sure what the correct natural ordering of taxa looks...
- 04:05 PM bug #6045 (Closed): NPE when using TaxonNaturalComparator
- When sorting a taxon hierarchy like the following:
/*
* Classification
* * Abies
* `- ... - 04:08 PM Revision efc96b49 (cdmlib): ref #6045 Fix NPE for TaxonNaturalComparator
- - fix getAncestors() method of taxon node
- added JUnit test - 02:07 PM Revision 5c7f2505 (cdmlib-apps): ref #6035 more character replacement rules
- 01:26 PM Revision e082affd (cdmlib-apps): fix #6035 character replacement rules
- 12:46 PM Revision b0a3a620 (cdmlib-apps): removing unused code
- 12:19 PM Revision 97e6a2a3 (cdm-vaadin): ref #5458 Split classification and taxa in two separate combo boxes
- 12:18 PM Revision f2bcb5be (cdm-vaadin): ref #5458 Remove unnecessary method parameters
- 12:18 PM Revision 427bdbbc (cdm-vaadin): ref #5458 Remove natural sorting from node retrieval
- 12:17 PM Revision e203f88d (cdm-vaadin): ref #5458 Error handling
- 11:46 AM Revision a51be4dc (cdmlib-apps): Alternative data files
- 11:26 AM Revision c2c4af3c (cdm-vaadin): ref #5458 Add root node to node container constructor
- 11:25 AM Revision 9fde8b52 (cdm-vaadin): ref #5458 refactor API method
08/29/2016
- 05:47 PM Revision 0021fedd (cdm-vaadin): ref #5458 Remove unnecessary text
- 05:38 PM Revision 89800b69 (cdm-vaadin): ref #5458 Fix details view
- 05:21 PM Revision deafa597 (cdm-vaadin): ref #5458 add white space to SQL query
- 05:21 PM Revision 1323a4df (cdm-vaadin): ref #5458 fix assignment of new distribution if it was null before
- 05:13 PM Revision b48c173c (cdm-vaadin): ref #5458 code cleanup
- 03:33 PM Revision 68d6d316 (cdm-vaadin): ref #5458 Fix and streamline SQL distribution query
- 12:40 PM Revision 81b53960 (taxeditor): fix #5607: laoding of parentnode with propertyPaths solves the problem
- 11:09 AM bug #6038 (Feedback): [Redmine] NoScript detects CrossSiteScritping for Redmine
- I think that this is a false positive xxs detection of NoScript.
Patric, please can you further investigate this i... - 10:27 AM Revision 2242f8a9 (cdm-vaadin): ref #5458 Revert SQL streamlining
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