Activity
From 03/15/2022 to 04/13/2022
04/13/2022
- 12:15 PM bug #10039: The specimen table tree shows missing date parts as "?"
- This should be fixed with parsing the partial.
- 12:14 PM bug #10039 (Resolved): The specimen table tree shows missing date parts as "?"
- Applied in changeset commit:cdm-dataportal|c2abfbb5280dc63e78d082d0c8a9d590af982329.
- 12:14 PM Revision c2abfbb5 (cdm-dataportal): fix #10039: parse partial
- 10:49 AM bug #10012 (In Progress): Fix failing SpecimensTreeViewTest for dataportals after debian11 migration
- * The problem is caused by the Specimen CEDiT 2017E68. If this is used as SpecimenTypedesignation or the taxon is use...
04/12/2022
- 02:34 PM Revision 297f7967 (cdm-dataportal): fix exception because of empty value
- 12:07 PM bug #10012: Fix failing SpecimensTreeViewTest for dataportals after debian11 migration
- Tested the tree view with local portal installation connected to the same cdm instance (https://int.e-taxonomy.eu/cdm...
04/08/2022
- 11:11 AM Revision c1e3bf07 (taxeditor): comment out admin preference pages actually not implemented
- 11:08 AM Revision f09ac804 (taxeditor): ref #10038: fix NPE in preference page
- 10:03 AM bug #6116: Advanced Search area filter layout needs to be improved
- An example with 3 vocabularies: https://efloramex.ib.unam.mx/cdm_dataportal/search
04/07/2022
- 10:39 PM feature request #10041 (New): Make formatting language/locale dependent
- Generally all formatter (once unified) should also have an invoke method including a locale parameter.
For referen... - 10:35 PM feature request #10040 (New): Allow an own TaxonName type for Pseudo-Taxa
- or better Pseudo-Taxon names.
This could be a i18n String only instead of all other TaxonName attributes.
Add t... - 09:44 PM bug #10039: The specimen table tree shows missing date parts as "?"
- 
- 09:43 PM bug #10039 (Closed): The specimen table tree shows missing date parts as "?"
- e.g. https://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/ecb7a76e-694a-4706-b1ab-a2eb334173ff/specimens
... - 04:06 PM bug #3536 (Resolved): Incorrect last version documentation for Editor
- Still needs to be checked for success after next release.
- 04:04 PM Revision 624d6b03 (taxeditor): Remove AK from the list of active developers for TaxEditor
- 04:03 PM Revision dfed0086 (taxeditor): ref #3536 remove changes.xml from TaxEditor site
- 04:01 PM Revision 39babfd9 (taxeditor): cleanup
- 03:32 PM Revision b1590a17 (cdmlib): cleanup
- 02:19 PM task #10010 (Resolved): Install Spanish for Mexico Eflora dataportal
- Should be resolved. Walter, can you please review?
- 02:08 PM bug #10038 (Closed): NPE when editing multilanguage support
- mail AM:
Beim Einstellen der Languages in DB Preferences – Language- MultiLanguageSupport
nach Auswahl bestimmt... - 02:03 PM bug #9776 (Closed): Enforce cdm webservice access via https when pages are requested via this schema
- This works now.
- 10:03 AM bug #9776: Enforce cdm webservice access via https when pages are requested via this schema
- The uris of the icons for the maps moved to https. We may check whether there are still elements called with http, bu...
- 10:51 AM Revision 8bb3bdbf (cdm-vaadin): ref #10037 fixed type in error message for self registration
- 10:48 AM Revision fa10645a (cdmlib): cleanup
- 10:48 AM Revision 0d1c03f7 (cdm-vaadin): cleanup
- 10:29 AM feature request #10036 (New): Allow description sources to have nameUsedInSource
- Similar to description element sources sources for description (datasets) usually refer to a taxon name which may dif...
04/06/2022
- 11:28 PM task #9974 (Closed): Upgrade edit-production
- 11:27 PM task #9973 (Closed): Upgrade edit-database
- 11:03 PM task #9972 (Closed): Upgrade edit-integration
- 10:42 PM bug #9776 (In Progress): Enforce cdm webservice access via https when pages are requested via this schema
- 01:29 PM bug #9776: Enforce cdm webservice access via https when pages are requested via this schema
- Now all webservice calls are redirected to https, but the warning still exist for the maps on specimen page.
- 06:00 PM bug #10033: For new FeatureTree only uuid is shown in dataportal
- The problem appears if the tree has only a protected titleCache but no presentation. Looks like the portal code does ...
- 09:42 AM bug #10033 (Closed): For new FeatureTree only uuid is shown in dataportal
- mail WB:
in der Portal Konfiguration kann ich den neuen Feature tree auswählen, aber im Gegensatz zu den anderen v... - 05:56 PM bug #10034: Flat feature tree throws exception
- The problem does only seem to appear if you try to move a node before you save. If you try to move there comes a mess...
- 05:49 PM bug #10034: Flat feature tree throws exception
- Error was:
~~~
last remote method : http://132.248.13.83:8080/cdmserver/cdm_flora_mexico/remoting/termnode.servic... - 09:43 AM bug #10034 (Closed): Flat feature tree throws exception
- mail WB:
für Mexico wollte ich einen neuen, sehr reduzierten feature tree erzeugen:
Beim Speichern kommt fol... - 05:55 PM Revision b246197c (cdm-server): Merge branch 'release/5.31.0' into develop
- 05:55 PM Revision 0e3bd655 (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 05:54 PM Revision 77cf56d6 (cdm-server): updating poms for branch'release/5.31.0' with non-snapshot versions
- 05:52 PM Revision 51f82de5 (cdm-webapp): Merge branch 'release/5.31.0' into develop
- 05:52 PM Revision 99091b20 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 05:51 PM Revision ef5b85af (cdm-webapp): updating poms for branch'release/5.31.0' with non-snapshot versions
- 05:51 PM Revision 479f3d7e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.31.0
- 05:32 PM Revision 85aed8cb (cdm-vaadin): Merge branch 'release/5.31.0' into develop
- 05:32 PM Revision 6f1fc289 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 05:31 PM Revision 5b1d7459 (taxeditor): Merge branch 'release/5.31.0' into develop
- 05:31 PM Revision dfc00a97 (taxeditor): Merge branch 'release/5.31.0'
- 05:29 PM Revision 585a362f (cdm-vaadin): updating poms for branch'release/5.31.0' with non-snapshot versions
- 05:28 PM Revision 9edcb780 (cdm-vaadin): jenkins bumping cdmlib.version to 5.31.0
- 05:27 PM Revision 11540b79 (cdm-dataportal): Merge branch 'release/5.31.0' into develop
- 05:27 PM Revision a13b5a39 (cdm-dataportal): updating poms for branch'release/5.31.0' with non-snapshot versions
- 05:27 PM Revision 5c0c3e8b (cdm-dataportal): release-preparation: production level css
- 05:25 PM Revision ba89530e (cdmlib): Updating develop poms back to pre merge state
- 05:25 PM Revision 5c74c4a4 (cdmlib): Merge branch 'master' into develop
- 05:25 PM Revision f13c8432 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 05:25 PM Revision 91096b61 (cdmlib): Merge branch 'release/5.31.0'
- 05:04 PM Revision dc2f744e (cdmlib): updating poms for branch'release/5.31.0' with non-snapshot versions
- 03:58 PM Revision 66048a89 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.31.0-SNAPSHOT
- 03:58 PM Revision c3e86551 (cdm-webapp): updating poms for 5.32.0-SNAPSHOT development
- 03:58 PM Revision 89c3c114 (cdm-webapp): updating poms for 5.31.0 branch with snapshot versions
- 03:58 PM Revision 7eca0acc (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.32.0-SNAPSHOT
- 03:57 PM Revision debd78cd (taxeditor): Updated version in pom / project files to taxeditor version : 5.32.0-SNAPSHOT and cdmlib version : 5.32.0-SNAPSHOT
- 03:57 PM Revision bf82f5ae (taxeditor): Updated version in pom / project files to taxeditor version : 5.31.0 and cdmlib version : 5.31.0
- 03:56 PM Revision 3799e07f (cdm-vaadin): jenkins bumping cdmlib.version to 5.31.0-SNAPSHOT
- 03:56 PM Revision 244b7402 (cdm-vaadin): updating poms for 5.32.0-SNAPSHOT development
- 03:56 PM Revision 78b74826 (cdm-vaadin): updating poms for 5.31.0 branch with snapshot versions
- 03:56 PM Revision e06ba605 (cdm-vaadin): jenkins bumping cdmlib.version to 5.32.0-SNAPSHOT
- 03:55 PM Revision 082f704f (cdm-dataportal): updating poms for 5.32.0-SNAPSHOT development
- 03:55 PM Revision 92dc87c9 (cdm-server): updating poms for 5.32.0-SNAPSHOT development
- 03:52 PM Revision bff55e97 (cdmlib): updating poms for 5.32.0-SNAPSHOT development
- 03:49 PM Revision 5252f023 (taxeditor): ref #4601 adapt server info for cybertaxonomy.org to use https port
- 02:27 PM Revision 79ce0b2b (cdmlib): use https for kml icons
- 01:07 PM Revision f81c688d (taxeditor): ref #9939: fix layout issue
04/05/2022
- 09:37 PM task #9971 (Closed): Upgrade edit-test
- 07:39 PM feature request #10020: Add media transformation for new BGBM mediahub image server
- Can you please review.
- 07:38 PM task #9999 (Closed): Improve formatting for referencing objects of descriptive data
- For now implementing all descriptive data formatting is enough. Open new ticket for further classes if needed.
- 07:36 PM Revision 3189fb06 (cdmlib): ref #9999 NPE fix in referencing object formatting
- 07:34 PM Revision 715296b9 (cdmlib): ref #9999 add referencing object formatting for quantitative data, temporal data and individual associations
- 06:16 PM feature request #4682: [DISCUSS] Do we need an explanation/reason field in RelationBase
- We will not implement this for "Moose" therefore remove it from parent and link it instead. Move to UML milestone
- 06:14 PM discussion #6613 (Closed): Interesting examples for good documentation
- Most interesting is the beautiful-docs link.
- 02:51 PM feature request #5346 (Feedback): Allow 3 ways of ordering in Taxon Navigator
- What exactly is the reason, why taxa can't be moved in between 2 other taxa? Currently you always get asked if you wa...
- 02:40 PM feature request #5836 (Closed): Rename the abbrev titlecache in Reference Details View
- I think we can keep it as it is, now. We will think about it again if a user complains.
- 12:44 PM task #9993 (Closed): Move markdown from code to developer wiki
- 11:26 AM task #9954 (Closed): Refactor EDIT Platform (Wiki) Documentation
- The wiki pages have been reordered and hierarchically structured. Parent pages were created. Decisions about how and ...
- 11:04 AM task #10032 (New): Create media metadata service documentation
- see #9954
- 10:59 AM task #10031 (New): Update geographic components documentation
- see #9954
[[GeographicComponents]] - 10:52 AM task #10030 (New): Update Phycobank and Webeditor documentation
- see #9954
- 10:31 AM task #10029 (New): Update other main groups and main page
- see #9954
include main page and sidebar - 10:30 AM task #10028 (New): Update Taxonomy Notes
- see #9954
- 10:28 AM task #10027 (New): Update DevelopmentNotes
- see #9954
- 10:27 AM task #10026 (New): Update DataModelsAndFormats
- see #9954
- 10:24 AM task #10025 (New): Update other platform pages in wiki
- see #9954
Includes updating the use-cases - 10:23 AM task #10024 (New): Update other platform components documentation
- see #9954
- 10:21 AM task #10023 (New): Update CDM Server documentation
- Also link "CDM Services" to a CDM Service description page, not directly to Swagger/OpenAPI. Decided https://wiki.bgb...
- 10:16 AM feature request #10022 (New): Add Factory Class for TermVocabularies
- mail AM:
ich bin gerade zufällig über deinen Commit zu CreateTermVocabularyOperation gestoßen.
Da wird OrderedTe... - 10:06 AM Revision e42ad559 (taxeditor): use newInstance method of OrderedTermVocabulary for ORderedTermVocabularies
- 09:53 AM Revision 3da38d99 (taxeditor): fix NPE when no preference for terms available
04/04/2022
- 08:57 PM task #10000 (Closed): Celebrate ticket no. 10,000
- I think we celebrated long enough, now ;-)
- 08:55 PM bug #10016 (Closed): NPE after move of taxon
- Seems to work as expected and code changes look reasonable.
- 08:43 PM feature request #9939: Implement specimen status in TaxEditor
- Andreas Müller wrote in #note-17:
> Issues 2 and 3 are of general interest for al such lists and collapsed sections.... - 08:39 PM feature request #9939 (Closed): Implement specimen status in TaxEditor
- Works as expected now.
- 08:42 PM feature request #10021 (New): Add concatenated label instead of "+" beside section label for collections
- Section labels for collections in details view and others do only show a "+" if data is available. Instead we could s...
- 08:19 PM Revision eebe266a (taxeditor): cleanup
- 07:38 PM feature request #10020 (Resolved): Add media transformation for new BGBM mediahub image server
- Applied in changeset commit:cdmlib|c77a9a7fe36610a33703e7b150e1b27e2f617bfc.
- 04:38 PM feature request #10020 (Closed): Add media transformation for new BGBM mediahub image server
- see #9998
- 07:38 PM Revision c77a9a7f (cdmlib): fix #10020 add mediahub to metadataservice transformation including tests
- 04:39 PM task #9998 (Closed): Update image links for cyprus
- Adaptation of media metadata service moved to new ticket: #10020
- 03:58 PM task #9998 (Resolved): Update image links for cyprus
- Applied in changeset commit:cdmlib-apps|9c133c4bc061f4236d51a2e4ac98d92ec9758488.
- 03:58 PM Revision 621d4229 (cdmlib-apps): ref #9932 some late minor changes to MexicoEflora imports
- 03:57 PM Revision 9c133c4b (cdmlib-apps): fix #9998 add CyprusNewImageUpdaterActivator
- 03:57 PM Revision d6820921 (cdmlib-apps): cleanup
- 02:52 PM task #9993 (Resolved): Move markdown from code to developer wiki
- Katja Luther wrote in #note-12:
> copied vaadin configuration description to wiki (https://dev.e-taxonomy.eu/redmine... - 02:51 PM task #9993: Move markdown from code to developer wiki
- copied vaadin configuration description to wiki (https://dev.e-taxonomy.eu/redmine/projects/algenregistrierung/wiki/C...
- 02:48 PM task #2091 (Resolved): Improve DataPortal documentation
- Restructured pages and removed outdated pages. Documentation of installation issues improved.
- 02:32 PM Revision 0f07b589 (utis-core): ref #9993: move utis core developer instructions to wiki
- 02:31 PM Revision 228eabdb (utis-webapp): ref #9993: move utis webapp developer instructions to wiki
- 01:56 PM Revision a0a470f6 (cdm-vaadin): ref #9993: move vaadin developer instructions to wiki
- 12:38 PM Revision bc572502 (cdmlib): fix case statement
- 11:46 AM Revision 8b4dbfe6 (cdm-dataportal): ref #9993: move information from md to developer wiki
- 11:25 AM Revision 8a46c985 (cdmlib): fix case statement
- 10:29 AM bug #10018 (New): Add Operation to add a name in source to all facts of a factual data set
- We need a possibility to add a name in source to all facts in a factual data set.
Maybe we should offer that the na... - 10:20 AM Revision 092e384a (taxeditor): adapt to changes ingetEmptyDefinedTermBase
- 10:15 AM Revision 798be028 (cdmlib): better handling of createEmptyTerm with language
04/01/2022
- 03:29 PM Revision 4592baa9 (taxeditor): adapt to new factory method
- 02:38 PM Revision 745e04e2 (cdmlib): adapt test to term creation with language
- 02:30 PM Revision 45f561f8 (cdmlib): term creation with language (cont.)
- - remove deprecated method and keep old factory methods
- remove unnessary second constructor - 12:34 PM Revision 5a77cb09 (cdmlib): term creation with language
- 11:25 AM Revision 01a9b431 (taxeditor): fix autoselect for enumCombo elements
- 10:32 AM Revision e0aec7fa (taxeditor): ref #5821: fix term handling after adapting local preferences
- 10:25 AM Revision bac35eb4 (taxeditor): create terms and vocabularies with default language representation
- 10:23 AM bug #10017: Progressmonitoring should be more fault-tolerant
- An example for such a server side thrown exception:
~~~
java : 1.8.0_321
org.springframework.remoting.RemoteAcce... - 10:20 AM bug #10017: Progressmonitoring should be more fault-tolerant
- Katja Luther wrote:
> Actually the progressmonitoring immediately throws exception when the server does not react, t... - 09:57 AM bug #10017 (New): Progressmonitoring should be more fault-tolerant
- Actually the progressmonitoring immediately throws exception when the server does not react, this should be handled w...
- 10:20 AM Revision 31b8aa9b (taxeditor): avoid calling disposed composite
- 10:01 AM Revision 652224bd (taxeditor): code cleaning
- 09:05 AM feature request #9939 (Resolved): Implement specimen status in TaxEditor
- Removed the '+'
- 09:03 AM bug #10016 (Resolved): NPE after move of taxon
- This is fixed by checking whether the value of the attribute is null.
- 08:56 AM bug #10016 (Closed): NPE after move of taxon
- Hallo,
(Mexico)
ich habe mal Taxa verschoben, und zwar die Familien direkt unter die Hauptgruppe Pteridofita, das k... - 08:57 AM Revision acdc2ed4 (taxeditor): ref #100016: fix NPE
03/31/2022
- 05:17 PM task #10015 (Duplicate): Cleanup EDIT server pages on BDI notes
- All subpages of https://wiki.bgbm.org/bdinotes/index.php/EDITServerSetup
- 04:32 PM bug #10014 (New): Fix windows build for CDM Server after debian11 upgrade
- copied from #9972
* exec-maven-plugin temporarily switched off in pom as it throws (see src/main/installer/win32... - 03:24 PM Revision 251cf9f4 (taxeditor): ref #9939: remove +
- 03:22 PM discussion #10013 (New): Check TAXIC methods for relevance
- At https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/DataPortalPrototypeInventory there functions from some other ...
- 12:33 PM task #5528 (Closed): Remove all links to svn
- This is fixed (open issue moved to #10005)
- 12:08 PM task #9972: Upgrade edit-integration
- Created follow up ticket for failing SpecimensTreeViewTest
- 12:05 PM bug #10012 (Closed): Fix failing SpecimensTreeViewTest for dataportals after debian11 migration
- copied from #9972
First check if there is any strange behavior for specimen trees (and maybe others) due to the de... - 11:55 AM discussion #10011 (New): Phycobank/Vaadin documentation
- Currently the user documentation is found at the Phycobank Redmine Wiki (https://dev.e-taxonomy.eu/redmine/projects/a...
- 11:24 AM task #10010 (Closed): Install Spanish for Mexico Eflora dataportal
- Also check if bi-lingual portal is easy to install.
Compare with cuba installation where all this exists.
The i... - 10:47 AM task #10009 (Closed): Cleanup dependencies in TaxEditor
- Remove all unnecessary dependencies from TaxEditor.
Includes intensive testing if everything still works as expected. - 10:12 AM bug #9965 (Closed): Newly created derived unit is not shown in selection dialog
- This works as expected now.
- 10:06 AM task #9973: Upgrade edit-database
- > ~~~
> Errors were encountered while processing:
> collectd-core
> E: Sub-process /usr/bin/dpkg returned an erro... - 10:01 AM task #9974 (In Progress): Upgrade edit-production
- 09:53 AM task #10008 (New): Cleanup after server upgrades
- * ~~Remove snapshots from vSphere~~
* remove restore files
* adapt restore scripts and make sure they stay on each ... - 09:51 AM bug #10007 (Closed): fix reindex jobs on jobber
- cdmserver-reindex-multiple and TRIGGER-cdmserver-reindex failed last time
- 09:41 AM task #10006 (New): Check backups fully work after upgrades to debian 11
- Check mostly the weekly and monthly backups and also check daily backup on edit-backup (/home/rsync/backup/edit-test/...
03/30/2022
- 02:27 PM task #9954: Refactor EDIT Platform (Wiki) Documentation
- All pages now follow the guideline from https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/Redmine_Best_Practice .
... - 02:23 PM task #3482: Dataportal administration documentation
- Andreas Müller wrote in #note-3:
> Andreas Müller wrote in #note-2:
> > WGB:
> >
> > wir haben das Dokument Manu... - 09:41 AM bug #9965 (Resolved): Newly created derived unit is not shown in selection dialog
- Andreas Müller wrote in #note-12:
> I have to reopen as this does not yet work if the derived unit has stats (not se...
03/29/2022
- 09:23 PM task #9971: Upgrade edit-test
- Open issue => moved to ticket description
- 09:19 PM bug #10004 (New): fix edit-name-catalogue-jmeter-tests
- copied from #9971
it is not running since upgrade to debian 11
Also check what the jenkins-groovy-scripts is f... - 03:40 PM task #8057 (Closed): Upgrade to debian 10
- This is generally fixed. For remaining open issues see related specific tickets.
- 03:22 PM task #9974: Upgrade edit-production
- Open issues => moved to ticket description
- 03:21 PM task #9973: Upgrade edit-database
- Almost done. Open issues: => moved to ticket description
03/28/2022
- 08:55 PM task #9918 (Closed): Import Caryophyllaceae
- Open unparsable name issues moved to #9014
- 08:39 PM task #9918: Import Caryophyllaceae
- All other "Name could not be parsed: " were incorrect data.
Not yet checked: "Nom ref could not be parsed: " - 07:09 PM task #9918: Import Caryophyllaceae
- Names with space after hybrid sign do not match:
Scleranthus × conocephalus Rchb. in Oesterr. Bot. Z. 22: 114. 1872 - 08:50 PM task #9014: Unparsable name strings
- Unparsable from Caryophylaceae import:
~~~
Alsine arvernensis Charb. in Bull. Soc. Bot. France 60(Sess. Extraord.): ... - 03:57 PM task #8559 (Worksforme): Revision of the technical concept for the demosites
- For now the demosites work and the installation scripts work faire enough. We may improve when needed. So I guess we ...
- 03:50 PM discussion #8558 (Closed): Questionaire to get user feedback
- I created a new wiki page for this list: https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/Platform_Questionaire. ...
- 01:55 PM Revision ca2d0796 (cdmlib): ref #9965: adapt face cache to specimen status
- 01:33 PM feature request #10003: Implement specimen status in Data portal
- As it is implemented in TaxEditor already it should be implemented in dataportal soon.
- 01:19 PM feature request #10003 (Closed): Implement specimen status in Data portal
- see #2506 for information on the "status" attribute
The information is already shown in long labels but not for at... - 01:00 PM bug #9965 (Feedback): Newly created derived unit is not shown in selection dialog
- I have to reopen as this does not yet work if the derived unit has stats (not seen, ...). This is new and is not yet ...
- 12:59 PM feature request #9939: Implement specimen status in TaxEditor
- Andreas Müller wrote in #note-17:
> The selection is now at a better place, so we can close this ticket.
>
> Ther... - 12:13 PM feature request #9939 (Feedback): Implement specimen status in TaxEditor
- The selection is now at a better place, so we can close this ticket.
There are only very few nice to haves that mi... - 10:38 AM feature request #9939 (Resolved): Implement specimen status in TaxEditor
- Andreas Müller wrote in #note-15:
> Generally this works. Only the location in the UI should be improved. Currently ... - 12:44 PM bug #9967 (Closed): Show "not designated" for type designations in dataportal
- Works as expected
- 09:30 AM bug #9967 (Resolved): Show "not designated" for type designations in dataportal
- please review, an example you can find here: https://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataporta...
- 11:00 AM task #9972 (In Progress): Upgrade edit-integration
- Katja, can you care for the SpecimensTreeViewTest issue?
- 10:31 AM Revision d5a87edf (taxeditor): ref #9939: move status section to general section and add status to section title
- 08:53 AM task #9971 (In Progress): Upgrade edit-test
- Mostly done
03/26/2022
- 06:15 PM task #9972: Upgrade edit-integration
- Migration is now done except for the open issues.
- 12:02 AM Revision b37127ee (cdm-dataportal): ref #9972 temporarily add Ignore to SpecimensTreeViewTest (not SpecimensTopDownViewTest)
03/25/2022
- 11:59 PM Revision 38403789 (cdm-dataportal): ref #9972 temporarily add Ignore to SpecimensTopDownViewTest due to build error ("squeeze" not found)
- 11:59 PM Revision 70bfb0dc (cdm-dataportal): cleanup
- 11:38 PM Revision a7cdf79b (cdm-server): ref #9972 temporarily switch of win32/exec build due to build problems after upgrading to debian 10 (cont.)
- 11:36 PM Revision 7ef1b9e7 (cdm-server): ref #9972 temporarily switch of win32/exec build due to build problems after upgrading to debian 10
- 11:52 AM task #8057 (In Progress): Upgrade to debian 10
- 11:21 AM task #9968: Add test/monit for testing if utis is running
- Not so urgent
- 11:00 AM task #9998: Update image links for cyprus
- DR:
...
Original: https://mediahub.bo.berlin/api/File/Original/1adb62d8-0b67-4128-927b-b713d164f98e/Sisymbrium_ae... - 10:14 AM Revision 74d4b7fd (taxeditor): if abbrevTitle is null, do not show in agentSelection dialogs
- 09:47 AM bug #8591: Multiple representations problem on setting synonym as basionym
- This issue pops up quite often again, so I put it to next milestone.
- 09:45 AM bug #8591: Multiple representations problem on setting synonym as basionym
- And again a multiple representation exception for homotypic group:
Liebes EDIT-support-Team,
Ich habe gerade ei...
03/24/2022
- 10:33 PM feature request #3709: [E+M][Editor] sufficient rights management for E+M workflow
- This is a review ticket only and therefore we can postpone it a bit.
- 10:31 PM feature request #6866: Improve specimen page
- This is a review ticket only and therefore we can postpone it a bit.
- 09:16 PM bug #10002 (New): Root taxa should not be abbreviated in taxon tree in dataportal
- Currently the root taxa (e.g. in Flora of Mexico) are abbreviated if not used with protected titleCache and leaving o...
- 02:55 PM feature request #2584 (Feedback): Show loading information for "Referencing Objects"
- This is probably fixed in the meanwhile. Please review.
- 02:48 PM feature request #5850 (Resolved): Further improve referencing objects label provider
- This seems to be fixed more or less. Please review and move open issues to other ticket(s).
- 02:46 PM feature request #6460 (Resolved): Refactor referencing objects in a way that supplemental data know what object they belong to
- This was probably already fully implemented some time ago. Please check.
Also check related tickets. - 02:34 PM task #9999 (In Progress): Improve formatting for referencing objects of descriptive data
- 01:37 PM task #9999 (Closed): Improve formatting for referencing objects of descriptive data
- ... and add ~~tests~~ for RefrencingObjectFormatter class
Some classes are not well formatter yet:
e.g.
* ~~Te... - 02:29 PM Revision 2789aa85 (cdmlib): ref #9999 improve ReferencingObjectFormatter for CategoricalData, StateData and TextData and add test class for ReferencingObjectFormatter
- 01:41 PM task #10000 (Closed): Celebrate ticket no. 10,000
- This is a ticket to celebrate our 10,000th issue!
Congratulations to all who worked on it!!! - 12:49 PM task #9998: Update image links for cyprus
- New transformation rule may look like (with fixed width of 300, 600, 1700):
~~~
{"scheme":null,"host":{"replace":"me...
03/23/2022
- 06:30 PM task #9998: Update image links for cyprus
- Check for empty images before:
~~~
SELECT mrp.id, mrp.created, mrp.updated, mrp.uri, mr.id mrID, m.id, m.titleCac... - 01:24 PM task #9998 (Closed): Update image links for cyprus
- Also update transformation rules and adaptation to mediaMetaDataService if necessary.
And discuss with Ralf images... - 03:34 PM bug #9966: Search order in advanced search not correct
- This ticket is not so much related to the current milestone so I move further to next week. Maybe we have to think ab...
- 03:32 PM feature request #9939 (Feedback): Implement specimen status in TaxEditor
- Generally this works. Only the location in the UI should be improved. Currently it is too much hidden.
For Derived... - 01:48 PM feature request #9939: Implement specimen status in TaxEditor
- please review.
- 09:53 AM feature request #9939 (Resolved): Implement specimen status in TaxEditor
- 02:54 PM Revision 203e43df (cdmlib-apps): remove flora bogota destination
- 02:53 PM Revision cae98cb6 (cdmlib-apps): latest changes to GreeceImageActivator
- 02:51 PM Revision ae765538 (cdmlib-apps): ref #9932 latest changes to MexicoEflora imports
- 02:49 PM Revision 3cdfd4b6 (cdmlib): ref #9932 minor
- 02:46 PM Revision 8852c2e9 (cdmlib): ref #9932 handle status correctly in ImportDeduplicationHelper.reset()
- 02:45 PM Revision eb2c058f (cdmlib): ref #9932 improve BibliographicAuthorParser and -Test
- 02:43 PM Revision f3cc9a33 (cdmlib): cleanup
- 12:29 PM task #6993: Implement web service tests
- This is probably more or less duplicated by for #9460
- 12:28 PM task #9460: REST API tests
- This is probably more or less a duplicated by #6993
- 12:11 PM bug #8591: Multiple representations problem on setting synonym as basionym
- follow up mail WB:
Hallo,
die Verschiebung ist aber erfolgt; nach Neu-Aufmachen des Zieltaxons konnte ich auch da... - 12:09 PM bug #8591: Multiple representations problem on setting synonym as basionym
- Again a multiple representation exception:
mail WB:
Hallo,
Fl. Cuba
Ich hatte vorher bei Exostema ixoroides subsp. ... - 11:55 AM Revision 57ebf56d (cdm-dataportal): ref #9967: use getText()
- 11:52 AM Revision b847789f (cdm-dataportal): ref #9967: use getText()
- 11:21 AM task #7054 (In Progress): clean up initialization strategy using '.representations'
- Please check what is still open here.
- 11:17 AM bug #4919: improve AdvancedBeanInitializer
- Please check what is still open
- 11:13 AM task #5418: optimize lucene index if possible
- Decide if this can be done in 5.33
- 11:09 AM bug #6195: Suppress footnotes in search results page
- Please check if this is still an open issue. If yes, please provide more information.
- 11:04 AM bug #8243 (Resolved): Cdm Cache uses a lot of disk space
- Please review if this is maybe fully fixed already or will be fixed after fully solving #9842.
Please pass to me a... - 10:39 AM bug #4962: improve portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} web service
- See also #7045 which indicates that the problem is not fully solved yet.
- 10:27 AM bug #4962: improve portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} web service
- Please review and move back to 3.12 when done.
Also check if new implementation is needed (follow up ticket) - 10:38 AM bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
- This seems to have happened after #4962 has been resolved.
Unfortunately the bogota example is not available (arch... - 10:18 AM bug #9608: UriUtils to use HTTP HEAD requests where possible
- much related to #9610 so we should work on this together
- 10:16 AM bug #9610: MediaMetadataFileReader (formerly in CdmImageInfo) loads same image file multiple times
- Check if this is not yet fixed in the meanwhile.
- 10:14 AM task #9842 (In Progress): Improve performance for loading DDS (RowWrapperDTO)
- 09:55 AM task #9993 (In Progress): Move markdown from code to developer wiki
- 09:19 AM bug #9978: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
- The initial problem was that the facade cache strategy created a string with a tailing dot and the derived unit cache...
- 09:08 AM bug #9978: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
- Andreas Müller wrote in #note-4:
> Not critical anymore because we implemented workaround for critical problems in #... - 09:12 AM bug #9965 (Closed): Newly created derived unit is not shown in selection dialog
- Added the dataportal commits, so we can close this ticket
- 09:09 AM bug #9965 (Feedback): Newly created derived unit is not shown in selection dialog
- This works as expected.
Can you still add the commits from dataportal to the ticket and then close it? - 09:00 AM Revision 241afe5a (cdmlib): ref #9965 add ticket link
- 08:49 AM feature request #9984 (Closed): Show area in common name label in facts view
- Works as expected.
03/22/2022
- 04:11 PM bug #9967 (In Progress): Show "not designated" for type designations in dataportal
- 04:11 PM bug #9967: Show "not designated" for type designations in dataportal
- I added a first implementation, but have problems with the test.
- 04:10 PM feature request #9939: Implement specimen status in TaxEditor
- Andreas Müller wrote in #note-11:
> Katja Luther wrote in #note-9:
> > To make it more flexible we should add a voc... - 01:31 PM feature request #9939: Implement specimen status in TaxEditor
- Katja Luther wrote in #note-9:
> To make it more flexible we should add a vocabulary with the terms, otherwise we ha... - 11:08 AM feature request #9939 (In Progress): Implement specimen status in TaxEditor
- To make it more flexible we should add a vocabulary with the terms, otherwise we have to add the terms in a static wa...
- 04:06 PM Revision 9c0fc564 (taxeditor): ref #9939: implement occurrence status in taxEditor - use AbstractSourcedEntityElement as base class
- 03:44 PM Revision 1ae81a78 (taxeditor): ref #9939: implement occurrence status in taxEditor - first implementation
- 02:51 PM Revision 07c1e8db (cdm-dataportal): ref #9967: fix c&p error - continue
- 02:42 PM Revision e38b1edd (cdmlib): ref #2506 update cdm model cache
- 02:31 PM Revision f21e7365 (cdm-dataportal): ref #9967: fix c&p error - continue
- 02:20 PM Revision c14e477b (cdm-dataportal): ref #9967: fix c&p error
- 01:58 PM Revision c5b5929b (cdm-dataportal): ref #9967: add test for not designated - continue
- 01:57 PM Revision eef0fe2a (cdm-dataportal): ref #9967: add test for not designated - continue
- 01:53 PM Revision 4e5bae69 (cdm-dataportal): ref #9967: add test for not designated - continue
- 01:51 PM Revision 19eaf878 (cdm-dataportal): ref #9967: add test for not designated - continue
- 01:49 PM Revision 0c92b3fa (cdm-dataportal): ref #9967: add test for not designated - continue
- 01:37 PM Revision 6ec1762a (cdm-dataportal): ref #9967: add test for not designated
- 01:35 PM Revision f7c10cb2 (cdm-dataportal): ref #9967: add test for not designated
- 01:30 PM Revision 774733da (cdm-dataportal): ref #9967: add test for not designated
- 12:58 PM Revision a915f3ff (cdm-dataportal): ref #9967: add not designated status, adapt to handling for name types
- 12:51 PM Revision 79acd54a (cdm-dataportal): ref #9967: add not designated status
- 10:44 AM bug #9965: Newly created derived unit is not shown in selection dialog
- Actually a workaround is implemented with removing the trailing dot in the facade cache strategy, please review for t...
- 10:41 AM feature request #4011 (Worksforme): disallow changing publish flag for users with unsuffcient rights
- This is fixed in the meanwhile.
- 10:29 AM task #2035 (In Progress): [MANUAL] Update Editor documentation to current version
- 10:29 AM task #2035: [MANUAL] Update Editor documentation to current version
- Andreas Müller wrote in #note-20:
> Generally check how far the documentation is integrated in the TaxEditor (e.g. h...
03/21/2022
- 11:22 PM discussion #1410 (Closed): DISCUSS - CDM product names
- Discussion is closed. I moved the results also to #PlatformComponents
- 02:13 PM bug #9990: Improve TaxEditor documentation
- Cleaned up outdated pages and moved them to the archive
- 02:10 PM feature request #9984 (Resolved): Show area in common name label in facts view
- this is implemented now, please review.
- 02:10 PM Revision c562c82f (taxeditor): ref #9984: add areaLabel to common name label - continue
- 02:07 PM Revision eedb760b (taxeditor): ref #9984: add areaLabel to common name label
- 01:58 PM task #9993: Move markdown from code to developer wiki
- * Moved README.md and DEVELOPER.md to wiki (https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/DataportalDevelopmen...
- 10:48 AM Revision 7a5f843d (cdm-dataportal): add mysql drupal db link
- 09:35 AM Revision 5cbdc5c8 (cdm-dataportal): add jdk1.8 installation on linux link
03/18/2022
- 04:04 PM feature request #6812 (Closed): Improve TaxEditor download site
- Open issue moved to #9995. Generally the new update site works as expected now.
- 04:01 PM discussion #9995 (New): Discuss structure of subsites for cybertaxonomy.org
- Currently we have download on toplevel which works well but needs to be discussed. What will we do with subpages like...
- 03:16 PM task #9994 (Closed): Tasks from documentation meeting 3/22
- either implement or create tickets for open tasks.
https://wiki.bgbm.org/bdinotes/index.php/BDI_332 - 02:31 PM task #9993: Move markdown from code to developer wiki
- Should be assigned to KL+AM
- 02:29 PM task #9993 (Closed): Move markdown from code to developer wiki
- for
* dataportal (completed)
* utis (completed)
* vaadin (#10011)
* EDIT platform manual (for now we keep it th... - 02:20 PM task #9992 (New): Move content for developers from site.xml's to developer Wiki
- This might become a parent ticket for subtickets or related tickets.
- 02:17 PM task #9991 (New): Move content for users and admins from site.xml's to cybertaxonomy.org/drupal
- This might become a parent ticket for subtickets for single site.xml's and/or topic related issues.
- 02:08 PM bug #9990 (New): Improve TaxEditor documentation
- We decided to write the TaxEditor developer documentation in this wiki. We have to look at every page and decide whet...
- 02:02 PM task #2091: Improve DataPortal documentation
- * Moved CdmDataportalBookmarks [[CdmDataportalBookmarks]] to Archive
- 08:21 AM bug #8916 (In Progress): ConcurrentModificationException in CdmFormFactory.destroyElement()
- 08:20 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- Maybe this is the same problem again?
The stacktrace is a little bit different but seems to be the same:
mail W...
03/17/2022
- 11:20 PM discussion #6613 (In Progress): Interesting examples for good documentation
- "Any interested developers, including customers, can subscribe to notifications on pull requests when the documentati...
- 01:52 PM feature request #9984 (In Progress): Show area in common name label in facts view
- Katja Luther wrote in #note-3:
> We should discuss how to format this and whether it should be configurable.
>
> ... - 10:38 AM feature request #9984: Show area in common name label in facts view
- We should discuss how to format this and whether it should be configurable.
The first implementation looks like th... - 09:10 AM feature request #9984: Show area in common name label in facts view
- Example: Piper auritum Kunth. , common name "uó (Mixe)" in Mexico Eflora.
- 09:06 AM feature request #9984 (Closed): Show area in common name label in facts view
- In the Mexico Eflora we have lots of common names that differ only by area (but not in name and language). To better ...
- 01:46 PM bug #6730 (Feedback): Deleting media leads to inconsistent data
- Andreas Müller wrote in #note-25:
> Sorry if I have even one more issue. Looking at the code I wonder if the service... - 11:09 AM bug #6730 (Closed): Deleting media leads to inconsistent data
- Now only media of descriptions and protogues can be deleted if they are used more then once. The messages are adapted...
- 01:40 PM Revision 0041651c (cdmlib): ref #9932 improve BibliographicAuthorParser
- 01:40 PM Revision 4b4f15bc (cdmlib): cleanup BibliographicAuthorParser
- 01:40 PM Revision 230416f7 (cdmlib): change FRANCEFRENCHREPUBLIC to FRANCE
- 11:27 AM feature request #8344 (Closed): Cdm light export: add dummy line in simple facts table
- 11:22 AM bug #9988 (New): Fix selection for supplemental data view/referencing objects view
- from #8316#note-4
But after closing the dialog (for selecting name in source of secundum source) the supplemental ... - 11:12 AM bug #8316 (Closed): Endless loop when editing name in source of distribution
- The selection issue is another problem, so I would close this ticket and create a new ticket for setting the correct ...
- 10:14 AM bug #9983: Order sources by source type
- Example: The common names of Randia obcordata in Mexico Eflora
- 09:03 AM bug #9983 (New): Order sources by source type
- Sources for description elements (and maybe others) are not yet ordered by source type. For users the "Primary XXX" s...
- 09:39 AM bug #9987 (New): Handle areas of different vocabularies in comparator
- Areas of different vocabularies can not be compared for example while creating the condensed distribution string in c...
- 09:27 AM bug #9986 (New): Log when cdmLight export is interrupted completely
- Actually the error log does not show whether the export was created or not if exceptions appeared. Sometimes the expo...
- 09:23 AM bug #9985 (New): Problems in cdmLight export which are caught and not critical should be warnings only
- Actually every exception during the export is logged as exception, but some are catched and should only be logged as ...
03/16/2022
- 10:12 PM feature request #5736 (Closed): Show sec reference for TaxonInteractions
- Remaining issue copied to #9982
- 10:10 PM feature request #9982 (Duplicate): Show links for sec references
- reported for taxon interaction sec references (#5736) but seems also not implemented for ordinary accepted taxon sec ...
- 06:02 PM feature request #3533 (Closed): Prefill nomenclatural reference information if possible
- works as expected
- 12:53 PM feature request #3533: Prefill nomenclatural reference information if possible
- Tested with nightly and it worked as expected. Please review.
- 09:40 AM feature request #3533 (Resolved): Prefill nomenclatural reference information if possible
- 02:24 PM bug #9980 (New): Implement a checkbox to distinguish between export the whole subtree or only the selected node
- from #6800
the subtree filter should be available now, please review. To filter on taxa, you have to click on taxon... - 02:22 PM feature request #6800 (Closed): Allow all filters for DwCA export in TaxEditor
- The last issue having a checkbox "include children" is still an open issue, therefore I create a new ticket and close...
- 01:52 PM task #8445 (Closed): improve service description
- 11:27 AM task #8445: improve service description
- still needs review after release
- 11:25 AM task #8445 (Resolved): improve service description
- Applied in changeset commit:utis-webapp|cb3e1fa442c8f68b4212a6bf27338296feb350fe.
- 01:52 PM task #6384 (Closed): update BGBM logo
- 11:11 AM task #6384 (Resolved): update BGBM logo
- still needs review after release
- 01:51 PM Revision 34e5f1cf (utis-webapp): fix #6384 resize the new Bo logo
- 11:25 AM Revision cb3e1fa4 (utis-webapp): fix #8445 update utis service description
- 11:01 AM Revision f52a3556 (utis-webapp): ref #9899 update log4j to v 2.17.2 in UTIS
- 11:00 AM Revision 2b46e98c (utis-webapp): ref #6384 update BO logo and some related issues
- 10:37 AM task #8863: Create full documentation on multilingual setup of the Data Portal
- As we have a concrete example now we should try to work on this during the next week.
- 10:34 AM task #8863: Create full documentation on multilingual setup of the Data Portal
- WGB: We can test-drive this with the setup of the Flora de México portal – I just received bi-lingual texts for the p...
- 10:31 AM bug #9978 (In Progress): Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
- Not critical anymore because we implemented workaround for critical problems in #9965.
Katja, can you document the... - 10:18 AM feature request #6812 (Resolved): Improve TaxEditor download site
- 10:09 AM bug #9966 (In Progress): Search order in advanced search not correct
- 10:04 AM discussion #8558: Questionaire to get user feedback
- So while cleaning up the documentation during the next weeks we should create a site with such relevant questions.
- 10:01 AM bug #5132 (Worksforme): Remove EDITor documentation from web
- The old documentation has been moved to archive and was replaced by a newer version at cybertaxonomy.org/download/man...
- 09:59 AM task #2035: [MANUAL] Update Editor documentation to current version
- ... and discuss future structure where documentation should be stored and how to update
- 09:47 AM task #2091 (In Progress): Improve DataPortal documentation
- 09:42 AM bug #9965 (Resolved): Newly created derived unit is not shown in selection dialog
03/15/2022
- 10:24 AM Revision 4ab64574 (cdm-dataportal): adapt tests to changes in cacheStrategy - continue
- 09:41 AM Revision f02cd83c (taxeditor): ref #6730: change message text for media deletion
- 09:39 AM bug #9979 (In Progress): Flora Greece shows large images
- though medium and small exist and seem to have correct metadata.
E.g. Achillea setacea https://portal.cybertaxonom... - 09:36 AM Revision c40b1228 (cdmlib): ref #6730: only media of descriptions and protologues can be deleted if referenced
- 09:07 AM discussion #8558: Questionaire to get user feedback
- WGB: Ich denke, es ist produktiver, die Leute, die direkt im Kontakt mit Nutzern stehen zu bitten, nach Workshops, Ku...
- 08:28 AM Revision 6a5ec781 (cdmlib): ref #9965 remove trailing dot in DerivedUnitFacadeFieldUnitCacheStrategy
Also available in: Atom