Activity
From 08/11/2021 to 09/09/2021
09/09/2021
- 06:02 PM bug #9701 (Closed): Order and display of different typifications for one name in one reference
- 04:52 PM bug #9701: Order and display of different typifications for one name in one reference
- Working not exactly as expected, but a little bit better :)
The colours are nice, the plural thing is also solved.
... - 02:40 PM Revision 3154576c (taxeditor): ref #9704: fix NPE when moving node to root
- 02:25 PM bug #9452: Name Type Editor: allowed combination of fields
- please review
- 02:25 PM bug #9452 (Resolved): Name Type Editor: allowed combination of fields
- Applied in changeset commit:cdm-vaadin|684d6197df0466dceb8ba592d5e4562593060a8a.
- 02:25 PM Revision 684d6197 (cdm-vaadin): fix #9452 consistend an sensible handling of name type status flags
- 02:18 PM bug #9753 (New): New adapted wizard(s) for exports/imports using the generic wizard
- Some exports and imports still use the generic wizard for exports/imports using the boolean attributes of the configu...
- 02:09 PM Revision 33545aa0 (cdmlib): improve attribute names and handle all name identifier in cdmlight
- 01:42 PM Revision 99814cc6 (cdm-vaadin): fixing LIE caused by new source structure in designationSource
- 01:36 PM Revision 2b76987d (cdm-vaadin): fixing typo
- 01:34 PM Revision 819da7cb (taxeditor): adapt method name to label of checkbox
- 01:31 PM Revision 16ff3561 (cdmlib-apps): cleanup
- 01:30 PM Revision fb00e77a (cdmlib-apps): ref #9752 adapt mexico import for flora-of-mexico import
- 01:22 PM Revision 632d2f2e (cdmlib): ref #9752 make it possible to add source with original information for imports
- 01:21 PM Revision 7f5ffbcf (cdmlib): ref #7646 , ref #9752 make "hort." parseable
- 01:20 PM feature request #7646 (Resolved): Implement parser and formatter for "hort."
- The parser has been implemented for the flora mexico import (#9752). A formatter is not necessary as we do not use a ...
- 01:17 PM feature request #6677 (Rejected): Add "hort." flag to Botanical names
- For the above reasons adding the flag is rejected.
- 01:13 PM Revision ce64cc74 (cdmlib): ref #9752 remove warning for getTitleWithoutYearAndAuthor for some refTypes
- 01:11 PM task #9752 (Closed): Import for Flora of Mexico
- 12:37 PM feature request #9706: Name Editor for Sections: show simple form for in-authors without full citation
- please review
- 12:37 PM feature request #9706 (Resolved): Name Editor for Sections: show simple form for in-authors without full citation
- Applied in changeset commit:cdmlib|051b6f6e98d82d69bd8ffefdd0c0df7d1e5958ad.
- 12:13 PM feature request #9706: Name Editor for Sections: show simple form for in-authors without full citation
- Andreas Kohlbecker wrote:
> this behavior should be activated when TaxonNamePopupEditorMode.NOMENCLATURALREFERENCE_S... - 12:36 PM Revision 051b6f6e (cdmlib): fix #9706 reducing field visibility of sections to authors, pages and inReference
- 12:34 PM task #9744: Find suitable name for the Freetext- or Name-Editor
- Die Verwechslungsgefahr zwischen "Name Editor" und "Name Bulk Editor" kommt vermutlich auch daher, dass bei den Bulke...
- 10:51 AM task #9744: Find suitable name for the Freetext- or Name-Editor
- WGB:
“Name Editor” ist tatsächlich historisch, und muss immer so erklärt werden. Einen technischen Namen („Freetex... - 11:12 AM bug #9751: [CdmLight] Exported identifier types should be configurable
- AM:
... wobei ich mir nicht ganz sicher bin, wie dringend wir die brauchen. Wenn die Identifier in eigener Tabelle... - 10:55 AM bug #9751 (New): [CdmLight] Exported identifier types should be configurable
- If all identifiers can be exported (see #9750), it should be configurable which types are exported.
- 10:53 AM bug #9750 (New): [CdmLight] Export all name identifier
- Actually only IPNI, Tropicos and WFO identifiers are exported, but the export should handle all kind of identifiers.
- 10:38 AM bug #9749 (Closed): NPE when opening SpecimenImportView
- Works as expected now.
- 09:30 AM bug #9749 (Resolved): NPE when opening SpecimenImportView
- Applied in changeset commit:taxeditor|51dfe6f454155927ac4d50c50474d8d13c3e2bd4.
- 09:07 AM bug #9749 (Closed): NPE when opening SpecimenImportView
- When opening the biocase or gbif import view:
~~~ text
last remote method : http://160.45.63.230:80/cdmserver/car... - 10:38 AM Revision c7ab12a6 (cdmlib): ref #9701 method to find the highest type status in a TypeDesignationWorkingSet
- 10:33 AM Revision 057b35b0 (cdmlib): ref #9701 taggedText to string method with exclude option
- 10:24 AM bug #9746: Remove excluded and unplaced flags from right click menu
- Related to this ticket: if the doubtful flag is set in the taxon node dialogue the navigator seems not to be refreshe...
- 10:16 AM bug #9746 (Feedback): Remove excluded and unplaced flags from right click menu
- The menu still shows the menu entries but disabled:
![](picture920-1.png)
- 09:52 AM Revision 9eeecf39 (taxeditor): fix #9749: fix NPE when opening specimen import view
- 09:15 AM Revision 51dfe6f4 (taxeditor): fix #9749: fix NPE when opening specimen import view
- 08:49 AM Revision 7723d3d3 (taxeditor): Updated version in pom / project files to taxeditor version : 5.26.1 and cdmlib version : 5.26.0
09/08/2021
- 10:16 PM bug #9701 (Resolved): Order and display of different typifications for one name in one reference
- please review
- 03:26 PM bug #9701: Order and display of different typifications for one name in one reference
- Other display issues, related to #9308, can be seen here:
![](picture866-1.png) - 10:15 PM Revision 4786c609 (cdm-vaadin): ref #9701 defined order of typifications in registration workingset editors
- 05:11 PM Revision a4ffd5b8 (cdm-vaadin): ref #9701 better display of typifications in registration workingset editors
- 03:08 PM feature request #9748 (New): Refactor identifiers
- Currently we have the Identifier class (Identifier string + type) and specific classes for DOI, ORCID, LSID etc used ...
- 02:17 PM task #8438 (Closed): remove featureTree/* web services in August 2021 if they are unused
- all featureTree/* web services removed
- 02:17 PM task #8438 (Resolved): remove featureTree/* web services in August 2021 if they are unused
- Applied in changeset commit:cdmlib|567659e868b4bc34d54aa11c03f3db9ee78c4334.
- 02:10 PM task #8438: remove featureTree/* web services in August 2021 if they are unused
- `/featureTree` is no longer being used, checked with `zgrep "/featureTree" cdm-server.2021*`
- 02:16 PM Revision 567659e8 (cdmlib): fix #8438 removing all featureTree/* web services
09/07/2021
- 03:28 PM Revision fd958579 (cdmlib): ref #9747 add language to TermType.getEmptyDefinedTermBase
- 03:26 PM feature request #9747 (Closed): Make languages editable in TaxEditor
- Currently languages are not yet editable in TaxEditor.
For the CDM this is correct. But other languages should be ...
09/06/2021
- 03:56 PM task #9744: Find suitable name for the Freetext- or Name-Editor
- AM:
Freitext-Editor finde ich persönlich nicht schlecht, höchstens, außer das in Zukunft auch mal andere Freitext ... - 03:43 PM task #9744: Find suitable name for the Freetext- or Name-Editor
- >Name-Editor is being used in the documentation for historic reasons.
Historically Cherian was using this term int... - 03:22 PM task #9744: Find suitable name for the Freetext- or Name-Editor
- Ein älterer Thread zum Thema:
WGB:
ok, verstanden. Ich finde finde den Begriff Taxon Node für die konkrete Stel... - 10:46 AM task #9744: Find suitable name for the Freetext- or Name-Editor
> Also Freitext Editor?
>
> @Katja Hast du die Email-Diskussion zu diesem Thema mit Walter denn gefunden und zu ...- 03:45 PM task #9308: Supress "designated by" reference in portal in registration ListView and RegistrationWorkingSetEditor
- can be reviewed from 7.9.21 on
- 03:44 PM task #9308 (Resolved): Supress "designated by" reference in portal in registration ListView and RegistrationWorkingSetEditor
- Applied in changeset commit:cdm-vaadin|574886857ce6fde57a478eb2ae3477eaa72ebd11.
- 03:43 PM Revision 57488685 (cdm-vaadin): fix #9308 more structured formatting of type labels and removing "designated by ..."
- 03:04 PM feature request #8979: Prevent misuse of field initial for personal names
- ready for review on 7.9.21
- 03:02 PM feature request #8979 (Resolved): Prevent misuse of field initial for personal names
- Applied in changeset commit:cdm-vaadin|e1e73a5eae7239539b205b44b365b52c591ba21d.
- 03:02 PM Revision e1e73a5e (cdm-vaadin): fix #8979 tooltip descriptions for all person fields
- 12:36 PM bug #9745 (Closed): pre-configured map layers using https
- all map layers are switched to https
- 12:18 PM Revision 961d35b0 (cdm-dataportal): updating documentation
- 12:14 PM Revision f568d5e4 (cdm-dataportal): Merge tag '5.26.3' into develop
- tagging release 2.26.3
- 12:14 PM Revision 27989fb5 (cdm-dataportal): Merge branch 'hotfix/5.26.3'
- 12:14 PM Revision fe4ffeba (cdm-dataportal): ref #9745 switching geo.cybertaxonomy.org to https
- 10:33 AM bug #9746: Remove excluded and unplaced flags from right click menu
- Please review. I also fixed the refresh problem, so now the menu should show set/remove menu item correctly immediate...
- 10:31 AM bug #9746 (Resolved): Remove excluded and unplaced flags from right click menu
- Applied in changeset commit:taxeditor|dc7a943c33e9a733dbf51ba7e86eaf91d7ff2ec2.
- 08:30 AM bug #9746 (Closed): Remove excluded and unplaced flags from right click menu
- The flags unplaced and excluded need more informations therefore it is does not make sense to have it in the right cl...
- 10:21 AM Revision dc7a943c (taxeditor): fix #9746: remove unplaced and excluded from right click menu of navigator
09/03/2021
- 05:51 PM Revision e9e677a6 (cdm-dataportal): Merge tag '5.26.2' into develop
- tagging release 5.26.2
- 05:50 PM Revision f9fc9292 (cdm-dataportal): Merge branch 'hotfix/5.26.2'
- 05:50 PM Revision 47cd8305 (cdm-dataportal): ref #9745 switching all map layers to https (except for geo.cybertaxonomy.org)
- 05:49 PM bug #9745: pre-configured map layers using https
- the correct URL for http://cybertaxonomy.org:8082/mapproxy/service is http://geo.cybertaxonomy.org/mapproxy/service a...
- 05:01 PM bug #9745: pre-configured map layers using https
- http://cybertaxonomy.org:8082/mapproxy/service
does not yet support https !!! - 04:55 PM bug #9745 (Closed): pre-configured map layers using https
- the maps layers provided in are still using http, this results in mixed in http content in the browser like http://b....
- 01:53 PM task #9744 (Closed): Find suitable name for the Freetext- or Name-Editor
- So far, we don't have a commonly accepted name for the "Freetext- or Name- or Wathever-Editor" which is consistently...
- 11:18 AM Revision 2ec64080 (cdmlib): cleanup
- 11:03 AM bug #9742: embedded h2 database in server mode for connection pooling
- This is probably more a cdmlib issue then a taxeditor issue
- 10:18 AM bug #9742 (New): embedded h2 database in server mode for connection pooling
ich versuche gerade, eine H2 Datenbank auf meinem Laptop zu installieren, in der Hoffnung, dass ich offline an der ...- 10:43 AM bug #9463: UniversalViewer causes jQuery version conflict and breaks maps
- using the UV webpack should solve the problem
- 10:42 AM bug #9743: Universal Viewer - metadata component gets lost on leaving fullscreen mode
- * a bug in our UV version?
* would using UV as webpack help? see also #9463 - 10:38 AM bug #9743 (New): Universal Viewer - metadata component gets lost on leaving fullscreen mode
- Norbert: "Wenn ich im Cichorieae-Portal vom Vollbild-View des Viewers auf die verkleinerte Fensteransicht zurückschal...
09/02/2021
- 03:42 PM bug #9729 (Closed): Incomplete bean property Team.nomenclaturalTitleCache
- 12:59 PM bug #9729: Incomplete bean property Team.nomenclaturalTitleCache
- seems to be working in cdm-vaadin with the latest adaptions. I could not find any problems.
- 09:23 AM Revision 0cee5989 (taxeditor): code cleaning, removing link with taxon in specimen tree editor
- 09:16 AM Revision 485f856b (taxeditor): missing l10n
- 12:53 AM feature request #8028: Better representation of web app media in the image gallery
- Is there a follow-up or a already-handled-in ticket for the missing metadata issue?
- 12:49 AM feature request #8028 (Feedback): Better representation of web app media in the image gallery
- I tried this with taxon media (the original usecase from the description of this ticket).
On caryo_spp /test serve...
09/01/2021
- 11:45 PM bug #9741: cdm_dataportal_shortname_of truncates uninomial with not abbreviated author strings and causes other odds
- Also #6203 might be relevant for this issue.
- 02:40 PM bug #9741 (New): cdm_dataportal_shortname_of truncates uninomial with not abbreviated author strings and causes other odds
- for example in https://132.248.13.83/cdm_dataportal/taxon/ed358b48-4e90-40d6-ba5f-10b81f18b72b
Asparagales Link is t... - 01:57 PM feature request #7749 (Rejected): Add "Link with taxon selection" as an icon to the toolbar of the specimen tree editor
- This will not be implemented for the reasons mentioned in #9732 (last issue). Instead we do have taxon navigator "ope...
- 01:55 PM bug #9723 (Duplicate): Specimen tree editor: Function of "Link with taxon selection" in context menu unclear
- This duplicates the last issue in #9732 and is fixed in the meanwhile (menu entry was removed).
- 01:43 PM Revision 3de8ad27 (taxeditor): ref #9732: remove link with taxon selection menu item
- 01:41 PM bug #9732: Open issues in specimen tree editor
- Katja Luther wrote:
> • Die Funktionsweise von „Link with taxon selection“ ist mir nicht klar. Bezieht sich das auf ... - 01:36 PM bug #9732: Open issues in specimen tree editor
- NoK:
* Filter "All unit types" statt "Unknown unit type" wäre in der Tat logischer
* "Im search gibt’s den Type... - 01:33 PM bug #9740 (Worksforme): Adapt Motive(Motif) to Subject in data portal
- for details see #9732#note-3
- 01:18 PM bug #9728: NoSuchMethodException Team.areNomenclaturalTitle() breaks authortem editors
- I made some adaptations to the changes. See also #9729#note-4
- 01:16 PM bug #9729: Incomplete bean property Team.nomenclaturalTitleCache
- Please check if this fullfills the requirements in vaadin.
- 01:15 PM bug #9729 (Resolved): Incomplete bean property Team.nomenclaturalTitleCache
- I adapted the changes so that it is similar to IdentifiableEntity.titleCache implementation.
This means:
* the ... - 01:10 PM Revision 9d57197e (cdmlib): Cleanup and javadoc
- 01:08 PM Revision c25885b8 (cdmlib): ref #9729, #9728, #9664 remove deprecated method setNomenclaturalTitle
- 01:03 PM Revision a32f4c74 (cdmlib): ref #9729, #9728, #9664 remove calls to deprecated method setNomenclaturalTitle
- 12:47 PM Revision 5e7ceaad (cdmlib): ref #9729, #9728, #9664 Adapt handling of nomenclaturalTitleCache setter and javadoc
- 12:37 PM Revision efd417dd (cdmlib): cleanup
- 11:08 AM Revision a931e823 (taxeditor): load availbale languages
- 11:04 AM Revision 279f5ec4 (taxeditor): ref #9739: use common name languages for combo and adapt pref page
- 09:56 AM bug #9739: Add common name languages preference to DB preferences
- This exception comes from the multilanguage prefernce, but needs to be fixed as well.
08/31/2021
- 11:09 PM Revision fd47e8cf (taxeditor): cleanup
- 11:08 PM bug #9739 (Feedback): Add common name languages preference to DB preferences
- Now it exists, but when saving I got:
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am... - 09:09 AM bug #9739 (Resolved): Add common name languages preference to DB preferences
- 09:05 AM bug #9739: Add common name languages preference to DB preferences
- Maybe the editor was not build?
I checked the nightly build and the common name languages where available for DB p... - 05:20 PM bug #9732: Open issues in specimen tree editor
- > Als Derived Unit – Media specimen – Kind of media gibt’s nur “Specimen scan”. Ich fände auch hier “Still image” gut...
- 05:18 PM bug #9732: Open issues in specimen tree editor
- > Der Titel des Bildes im Tree ist das Specimen-Aufsammlungs-Zitat, das ist etwas unglücklich (und repetitiv), finde ...
- 05:08 PM bug #9732: Open issues in specimen tree editor
- AM:
nur zu motive <-> motif. Bist du da sicher. Laut https://dict.leo.org/englisch-deutsch/motive ist motive eher ... - 09:15 AM bug #9735 (Closed): [CdmLight] Add type specimen to specimen table
- 09:13 AM bug #9645 (Closed): CDM Light: Add Type Statement Reference to homotypicalGroup.csv
- 09:08 AM bug #9737 (Closed): [CdmLight] Add two dummy lines for empty tables
- 09:07 AM bug #9736 (Closed): [CdmLight] Add new table for type designation to specimen relationship
- This ticket can be closed.
08/30/2021
- 09:07 PM bug #9263 (Closed): Unify case for type designation status
- Andreas Kohlbecker wrote:
> Mir ist nicht klar was ich hier machen soll. Die im Kommentar 3 erwähnten FIXMEs sind al... - 08:23 PM bug #9704 (Closed): Several issues when trying to move taxon with dialogue
- Both issues seem to be fixed.
- 08:20 PM Revision 0351b2c7 (cdmlib): cleanup
- 08:18 PM Revision c11c91e6 (taxeditor): cleanup
- 07:41 PM bug #9736 (In Progress): [CdmLight] Add new table for type designation to specimen relationship
- As there are already commits on this ticket it seems to be at least "In Progress".
If resolved already please adapt ... - 07:34 PM bug #9739 (Feedback): Add common name languages preference to DB preferences
- The current db preferences menu only shows "multi-language support" but not "languages for common names".
Something ...
08/27/2021
- 11:26 AM bug #9738 (Closed): NomenclaturalSourceFormatter throws OutOfMemory with only protected titleCache
- 09:53 AM bug #9739 (Resolved): Add common name languages preference to DB preferences
- this should be done, please review.
- 09:52 AM bug #9739 (Closed): Add common name languages preference to DB preferences
- The common name languages should be available as db preferences.
- 09:46 AM Revision 7f73ebf0 (taxeditor): add common name language pref to db preferences
08/26/2021
08/23/2021
- 11:25 AM Revision 47b3a58b (cdmlib): ref #9737: adapt test to dummy lines -continue
- 11:19 AM Revision ff169db3 (cdmlib): ref #9737: adapt test to dummy lines
- 10:04 AM Revision 2175409a (cdmlib): ref #9737: add dummy lines to cdmLight export
08/21/2021
- 02:20 PM bug #9738 (Resolved): NomenclaturalSourceFormatter throws OutOfMemory with only protected titleCache
- Applied in changeset commit:cdmlib|92aff79642cb9e91dbc6daf68ab3df60e9d17f7b.
- 02:18 PM bug #9738 (Closed): NomenclaturalSourceFormatter throws OutOfMemory with only protected titleCache
- Calling the formatter with a reference that has only a protected titleCache and with an empty microReference leads to...
- 02:20 PM Revision 92aff796 (cdmlib): fix #9738 fix recursion for only titleCache protected nomenclatural source
08/18/2021
- 03:44 PM bug #9737 (Closed): [CdmLight] Add two dummy lines for empty tables
- mail WB:
Und noch eine Bitte: Beim Einlesen bzw. beim Weiterverarbeiten der .csv Tabellen habe ich Mühe mit Tabell... - 01:01 PM Revision 093a4f0e (taxeditor): ref #9698: adapt plugin.xml
- 12:49 PM Revision 55235f66 (cdmlib): adapted interface
- 12:46 PM Revision a5a5ec1b (cdmlib): only log lazy initialisation exception while remove null from collection
- 11:32 AM Revision 79f6eb28 (taxeditor): ref #9710: further work to avoid constraint violation exception
- 09:07 AM Revision 68ae967f (taxeditor): ref #9698: add page for db preference for namerelationships
08/17/2021
- 02:15 PM Revision 7f7f914d (taxeditor): ref #9710: update the dtos after merge
- 01:45 PM Revision 0c5ef4ef (taxeditor): adapt editor to changes in SpecimenRowWrapperDTO
- 12:38 PM Revision 3889d783 (cdmlib): adaption to cleaned code
- 12:01 PM Revision 93c502fa (cdmlib): ref #9736: add name_fk and preferred source fk to specimen type table
08/16/2021
- 12:30 PM Revision f9e1b92e (taxeditor): ref #9710: update descriptions of matrix after save
- 12:28 PM Revision 97314f0e (cdmlib): code cleaning
- 11:21 AM bug #9710 (In Progress): DataIntegrityViolationException after adding a specimen to the matrix
- 11:20 AM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
- This problem seems to appear when adding a new specimen, save and enter other data to this new description and save a...
- 10:02 AM Revision 059d5aa2 (cdmlib): ref #9736: new table for (specimen)typedesignations
08/13/2021
- 08:21 AM bug #9736 (Closed): [CdmLight] Add new table for type designation to specimen relationship
- mail WB:
1. In CDM-light gibt es keine direkte Verbindung zwischen Namen und Typus-Beleg-ID. Es ist zwar vermutlic...
08/12/2021
- 02:00 PM Revision 6cd0ec25 (taxeditor): ref #9734: adapt text in preferences for default secundum behaviour
- 01:47 PM bug #9734 (Resolved): Correct handling for secundum references when moving taxon to new parent
- This is handled like change synonym to accepted taxon and accepted taxon to synonym (not swap), please review.
- 12:30 PM Revision 67b361e3 (taxeditor): adapt test
- 11:36 AM Revision 296fa5af (cdmlib): ref #9340, #9734, #9668: result should be of type DeleteResult
- 09:00 AM Revision f07a4d44 (taxeditor): adapt to preferencePredicate changes
- 08:32 AM Revision aa72def7 (cdmlib): missed to add adapted test
08/11/2021
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