Activity
From 03/16/2023 to 04/14/2023
04/14/2023
- 06:01 PM task #10302: Revise Status section
- Nach den Screenshots hatte ich für Vaadin noch 2 und 3 ausgetauscht, also erst "Rule considered", dann "Code edition"
- 05:59 PM task #10302 (Closed): Revise Status section
- Die Status-Sektion wurde im PhycoBank Projekt pragmatisch, aber nicht Modell-konform implementiert. Seit AM darauf hi...
- 05:43 PM Revision 4cfa3aba (cdmlib): revert some cleanup
- 05:31 PM task #10295 (Closed): Parse verbatim year in reference
- For the details view parsing this should work. Name parsing handled in #10299
- 03:55 PM task #10295: Parse verbatim year in reference
- This fix is only for the parsing in the Date published parser field:
Gene... - 11:35 AM task #10295 (Resolved): Parse verbatim year in reference
- 11:17 AM task #10295 (Closed): Parse verbatim year in reference
- 09:52 AM task #10295: Parse verbatim year in reference
- fixed
- 03:08 PM bug #10301 (Rejected): Allow curators to edit missing name informations
- copied from #10269#note-15
"Als Curator bekomme ich die selbe Meldung, d.h. der Nachtrag der fehlenden Referenz is... - 03:07 PM bug #10269: Selecting existing name for typification
- WHK:
viel besser lesbar jetzt, vielen Dank
ABER: Als Curator bekomme ich die selbe Meldung, d.h. der Nachtrag ... - 02:25 PM feature request #10291 (Closed): Implement second publisher information for bibliographic reference formatting and other remaining issues
- Now it is correct. I simplified the code still a bit, but as all tests are still running I guess it works as before a...
- 12:02 PM feature request #10291 (Resolved): Implement second publisher information for bibliographic reference formatting and other remaining issues
- this should be fixed, please check
- 10:34 AM feature request #10291 (Feedback): Implement second publisher information for bibliographic reference formatting and other remaining issues
- One more issue found. See commented test.
- 09:10 AM feature request #10291 (Resolved): Implement second publisher information for bibliographic reference formatting and other remaining issues
- Andreas Müller wrote in #note-10:
> Belen Escobari wrote in #note-3:
> > A second place published and a second publ... - 08:07 AM feature request #10291: Implement second publisher information for bibliographic reference formatting and other remaining issues
- Andreas Müller wrote in #note-12:
> Andreas Müller wrote in #note-11:
> > Belen Escobari wrote in #note-8:
> > > J... - 02:23 PM Revision da3b09d5 (cdmlib): cleanup
- 02:23 PM Revision 54ce6318 (cdmlib): ref #10291 simplify publisher formatting
- 12:49 PM Revision 2cfff606 (taxeditor): fix missing label for source
- 12:31 PM Revision af35ec6a (cdm-server): Merge branch 'release/5.37.0' into develop
- 12:31 PM Revision b18f56ad (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 12:30 PM Revision e878fd07 (cdm-server): updating poms for branch'release/5.37.0' with non-snapshot versions
- 12:29 PM Revision ba652313 (cdm-webapp): Merge branch 'release/5.37.0' into develop
- 12:29 PM Revision cfb999cb (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 12:29 PM Revision 6c274fb9 (cdm-webapp): updating poms for branch'release/5.37.0' with non-snapshot versions
- 12:29 PM Revision a05c6105 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.37.0
- 12:28 PM Revision 0a88ab11 (cdm-vaadin): Merge branch 'release/5.37.0' into develop
- 12:28 PM Revision e68b3a82 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 12:25 PM Revision bdabee63 (cdm-vaadin): updating poms for branch'release/5.37.0' with non-snapshot versions
- 12:25 PM Revision 1c841da5 (cdm-vaadin): jenkins bumping cdmlib.version to 5.37.0
- 12:25 PM Revision d03a223b (taxeditor): Merge branch 'release/5.37.0' into develop
- 12:25 PM Revision 94cf8b29 (taxeditor): Merge branch 'release/5.37.0'
- 12:24 PM Revision 315c5584 (cdm-dataportal): Merge branch 'release/5.37.0' into develop
- 12:24 PM Revision 2026c96b (cdm-dataportal): updating poms for branch'release/5.37.0' with non-snapshot versions
- 12:23 PM Revision 44f85000 (cdm-dataportal): release-preparation: production level css
- 12:23 PM Revision ce4f8f0a (cdmlib): Updating develop poms back to pre merge state
- 12:23 PM Revision b73239b9 (cdmlib): Merge branch 'master' into develop
- 12:23 PM Revision aa75d994 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 12:23 PM Revision 7b7c59b5 (cdmlib): Merge branch 'release/5.37.0'
- 12:15 PM feature request #5850 (Worksforme): Further improve referencing objects label provider
- All issues have been fixed in the meanwhile
- 12:09 PM Revision 83591b2a (cdmlib): updating poms for branch'release/5.37.0' with non-snapshot versions
- 11:59 AM Revision 5f60d54d (cdmlib): ref #10291: adapt cache strategy for place published and publisher
- 11:20 AM Revision 2d0393fb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.37.0-SNAPSHOT
- 11:19 AM Revision 5de8b69b (cdm-webapp): updating poms for 5.38.0-SNAPSHOT development
- 11:19 AM Revision 4f781f66 (cdm-webapp): updating poms for 5.37.0 branch with snapshot versions
- 11:19 AM Revision 62c5dccb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.38.0-SNAPSHOT
- 11:19 AM Revision 2b0af869 (taxeditor): Updated version in pom / project files to taxeditor version : 5.38.0-SNAPSHOT and cdmlib version : 5.38.0-SNAPSHOT
- 11:19 AM Revision 345dc0b9 (taxeditor): Updated version in pom / project files to taxeditor version : 5.37.0 and cdmlib version : 5.37.0
- 11:19 AM bug #7633: MySQLIntegrityConstraintViolationException - Duplicate entry during fact editing
- mail Maryam Malekmohammady:
I downloaded the 64-Java included version of the TaxEditor and I am using it now to wo... - 11:18 AM Revision 832dadc7 (cdm-server): updating poms for 5.38.0-SNAPSHOT development
- 11:17 AM Revision 723f0f81 (cdm-vaadin): jenkins bumping cdmlib.version to 5.37.0-SNAPSHOT
- 11:17 AM Revision 0217d1d2 (cdm-dataportal): updating poms for 5.38.0-SNAPSHOT development
- 11:17 AM Revision f1c73d87 (cdm-vaadin): updating poms for 5.38.0-SNAPSHOT development
- 11:17 AM Revision bbfac6c7 (cdm-vaadin): updating poms for 5.37.0 branch with snapshot versions
- 11:17 AM Revision 03ec7e53 (cdm-vaadin): jenkins bumping cdmlib.version to 5.38.0-SNAPSHOT
- 11:14 AM Revision 9bb7a554 (cdmlib): updating poms for 5.38.0-SNAPSHOT development
- 10:12 AM Revision 63fc69df (cdmlib): ref #10291 add additional 2nd publisher formatting test
- 10:11 AM bug #8591: Multiple representations problem on setting synonym as basionym
- mail WB:
Hallo,
nach Eingabe Concept Ref bei pp Synonym.
HG
W
~~~
last remote service : https://api.cybe... - 10:00 AM Revision 5fce180a (cdmlib): ref #10291 remove publication info from IJournal
- 09:12 AM bug #10300 (New): Preferences issues for filtering for term trees
- copied from #10284:
Maybe some little fine tuning can be done for the preference (DB+local) + filter handling.
... - 09:10 AM feature request #10284 (Closed): Allow term trees as filters for named area dialogues
- Andreas Müller wrote in #note-4:
> This works well for the filtering. Maybe some little fine tuning can be done for ... - 09:09 AM Revision 167ee41a (cdmlib): ref #10291: adapt cache strategy to all possible missing data cases in
- publisher information.
- 08:26 AM Revision d09d91b9 (taxeditor): fix allow titleCache editing for term trees and remove representation
- fields
- 08:06 AM Revision 755e96f4 (taxeditor): ref #10291: remove publisher informations for journals in details view
04/13/2023
- 06:14 PM feature request #10291: Implement second publisher information for bibliographic reference formatting and other remaining issues
- Andreas Müller wrote in #note-11:
> Belen Escobari wrote in #note-8:
> > Journals werden nicht mit Publisher zitier... - 05:12 PM feature request #10291: Implement second publisher information for bibliographic reference formatting and other remaining issues
- Belen Escobari wrote in #note-8:
> Journals werden nicht mit Publisher zitiert, ich kenne auch keine Ausnahmen.
I... - 05:04 PM feature request #10291 (Feedback): Implement second publisher information for bibliographic reference formatting and other remaining issues
- Belen Escobari wrote in #note-3:
> A second place published and a second publisher is now implemented in the referen... - 05:36 PM bug #10299 (Discussed): Verbatim year parsing and formatting for nomencl. references
- 05:25 PM feature request #10284 (Resolved): Allow term trees as filters for named area dialogues
- This works well for the filtering. Maybe some little fine tuning can be done for the preference (DB+local) + filter h...
- 05:20 PM feature request #10288 (Closed): Implement publisher and placePublished2 in TaxEditor
- I think we can leave it as it is.
- 05:02 PM Revision 9d983a97 (cdmlib): ref #10291 add commented test for formatting with missing data
- 03:56 PM bug #10287 (Closed): Remaining issues for Remote Server View
- Works as expected now an can be closed.
- 03:51 PM bug #10293 (Worksforme): Person search results does not show identifier correctly
- The problem here was that the database (data model) was already updated but the CDM Server was still the old version....
- 03:21 PM Revision 9c0016ba (taxeditor): ref #10824: adapt also common name area selection so term tree selection
- is possible
- 03:11 PM Revision b60ffd2e (cdmlib): unify list and listByAbbrev methods (cont.)
- 02:53 PM Revision 3a846bd3 (cdmlib): unify list and listByAbbrev methods
- 02:39 PM Revision 779522f8 (taxeditor): ref #10284: adapt for no termtrees
- 02:38 PM Revision ec374129 (cdmlib): ref #10284 fix test data
- 02:30 PM Revision 4e5f0be1 (taxeditor): ref #10284: code cleaning
- 02:23 PM Revision df3e551a (taxeditor): ref #10284: add possibility to choose termtree for terms
- 02:21 PM Revision 4f675264 (cdmlib): ref #10284 further finetuning for term service
- 02:19 PM Revision ccb5b5b6 (taxeditor): ref #10284: adapt editor code to changes in service
- 01:16 PM Revision 3a8c69d9 (cdmlib): fix key for Symbol1 in TermSearchField
- 01:15 PM Revision 5c1cc699 (cdmlib): cleanup
- 01:15 PM Revision 98ac79de (cdmlib): ref #10284 finetuning for term service
- 10:47 AM Revision 73cafc53 (taxeditor): ref #10824:add trees to namedAreaDialog and filter - first
- implementation
04/12/2023
- 10:56 PM Revision 7451bc51 (taxeditor): cleanup
- 07:58 PM Revision ba04dffc (cdmlib): ref #10284 add graph search on label
- 05:57 PM Revision 9af2c3b2 (taxeditor): ref #10284 adapt NamedAreaSelectionDialog and CommonNameNamedAreaSelectionDialog to term collection search
- 05:57 PM Revision 66fa42a1 (taxeditor): cleanup
- 05:56 PM Revision 69a04478 (cdmlib): temp ignore distribution service tests related to map service
- 05:40 PM Revision deaca585 (cdmlib): ref #10284 adjust service API to allow retrieving terms of a term collection
- 04:24 PM Revision d724ca92 (cdmlib): cleanup
- 03:24 PM Revision dc0daf78 (taxeditor): ref #10287: adapt connection test
- 02:08 PM bug #10299: Verbatim year parsing and formatting for nomencl. references
- AM:
in diesem Kontext ist uns aufgefallen, dass nomenklatorische Referenzen bislang ohne quotation mark formattiert ... - 01:53 PM bug #10299 (In Progress): Verbatim year parsing and formatting for nomencl. references
- The problem with this nomenclatural reference string is not the **ser** part but again the verbatim date part.
The ... - 12:20 PM bug #10299 (Closed): Verbatim year parsing and formatting for nomencl. references
- The correct reference formatting when adding the data in the data field is:
*Caucasoseris abietina (Boiss. & Balan... - 01:39 PM task #10295: Parse verbatim year in reference
- This should be fixed. Please review.
- 12:14 PM task #10295 (Resolved): Parse verbatim year in reference
- 12:14 PM task #10295: Parse verbatim year in reference
- AM:
grundsätzlich wird 2009 ["2008"] bereits schon geparsed.
Das Problem bei Nadjas Formatierung war, dass 2009 [... - 01:27 PM task #8514 (Closed): remove all PhycoBank redmine instances
- Andreas Müller wrote in #note-10:
> I guess this is fully implemented.
>
> Katja, can you have a final look if A... - 11:11 AM task #8514: remove all PhycoBank redmine instances
- @Katja: did you have a look on this? Can we close?
If yes, please remove milestone. - 01:07 PM Revision 2d2a661d (taxeditor): ref #10287: add move up and down in context menu
- 12:53 PM feature request #10284: Allow term trees as filters for named area dialogues
- We should have a look if this can be included in current milestone as urgently needed for eFloraMex
- 12:52 PM feature request #10291: Implement second publisher information for bibliographic reference formatting and other remaining issues
- Journals werden nicht mit Publisher zitiert, ich kenne auch keine Ausnahmen.
"Print series": das ist schon mal ein... - 12:23 PM feature request #10288 (Resolved): Implement publisher and placePublished2 in TaxEditor
- 12:13 PM Revision 6b67af3e (cdmlib): ref #10295 allow left quotation mark as right part of the quotation
- 11:38 AM bug #1924 (Closed): CIHORIEAE in-references in Footnotes
- 11:22 AM bug #10296 (Closed): Area Filter does not work in advanced search
- The search UI works on the test server for E+M now and the fix makes sense. So I guess we can close.
- 11:09 AM task #9975: Create new UML diagramms for the CDM
- We will need further finetuning and also commit + installation so there is further work to do and we keep in 5.38
- 11:01 AM bug #10287 (Feedback): Remaining issues for Remote Server View
- Everything works as expected. One more nice-to-have issue: allow "move up" and "move down" via d&d or context menu.
- 10:01 AM bug #10287: Remaining issues for Remote Server View
- Minor issues:
* Documentation of the class and the methods is often not correct. Also IMO we can fully documentation... - 10:03 AM bug #10297 (New): Update php version on edit servers
- On all servers more than one php version is installed, we should have a look whether they are still needed or could b...
- 09:59 AM Revision 59c95f1b (taxeditor): cleanup
- 09:59 AM Revision 8ba075b7 (taxeditor): ref #10287 change cdmlib label to lower case
04/11/2023
- 06:04 PM bug #2121 (Closed): Series part is not reflected in cache strategy
- 10:36 AM bug #10296 (Resolved): Area Filter does not work in advanced search
- 10:36 AM bug #10296: Area Filter does not work in advanced search
- This is fixed with checking for vocabulary dto in localize()
- 10:35 AM bug #10296 (Closed): Area Filter does not work in advanced search
- mail ERS:
seit den letzten Updates/Maintenance gibt es keine Möglichkeit mehr, nach Arealen zu filtern.
„Type t... - 10:12 AM bug #10287 (Resolved): Remaining issues for Remote Server View
- Please review.
- 10:11 AM bug #10287: Remaining issues for Remote Server View
- For the check cdmlib version the basic version is implemented now.
- 10:08 AM Revision 0ded4de0 (taxeditor): ref #10287: add recommended to check cdmlib version
- 10:00 AM Revision a32745ae (taxeditor): ref #10287: handling wrong port information
- 09:41 AM feature request #10288: Implement publisher and placePublished2 in TaxEditor
- Andreas Müller wrote in #note-6:
> To short the label I suggest to use "2nd ..."
This is implemented. - 09:40 AM feature request #10288: Implement publisher and placePublished2 in TaxEditor
- Katja Luther wrote in #note-4:
> I think the second publisher information should be editable only if the first publi...
04/05/2023
- 11:18 AM bug #1924 (Resolved): CIHORIEAE in-references in Footnotes
- Verbatim year is already implemented. A test was added in the class VerbatimTimePeriodFormatterTest
- 10:59 AM Revision fda4c183 (cdmlib): ref #1924: verbatim date is added: 2008 [“2007”]
04/03/2023
- 01:29 PM bug #2121 (Resolved): Series part is not reflected in cache strategy
- This is already implemented and an example is given in the class ReferenceDefaultCacheStrategyTest method testBookGet...
- 11:34 AM task #10295 (Closed): Parse verbatim year in reference
- der Formatierung-Input, der korrekt geparst wird ist:
Kilian N. & Raab-Straube E. von "2009" [2008]: Flora der Al...
03/31/2023
03/30/2023
- 04:18 PM task #9975 (Resolved): Create new UML diagramms for the CDM
- The new diagrams were updated
https://cybertaxonomy.org/cdm-uml/v532/webpage/Diagrams.html
- 02:58 PM Revision b7b2f0b7 (taxeditor): ref #10287: better order of menu items
- 02:27 PM bug #10287 (In Progress): Remaining issues for Remote Server View
- 02:26 PM Revision 67d1d741 (taxeditor): ref #10287: keep order of remote server entries
- 01:24 PM Revision fb1658e1 (taxeditor): ref #10288: shorter label
- 01:23 PM Revision a72044a9 (taxeditor): ref #10288: enable/disable fields depending on presence of first
- publisher informations
- 11:50 AM feature request #10294 (New): Zoom in and out for the Name Editor
- mail Maryam Malekmohammady:
I was looking for a tool in TaxEditor to zoom in the taxon names etc. without changing... - 11:41 AM Revision 44763fd8 (cdm-dataportal): remove System.err.println
- 11:30 AM Revision 79b6f917 (cdm-dataportal): minor
- 11:27 AM Revision 8a516583 (cdm-dataportal): Test
03/29/2023
- 02:34 PM bug #10293: Person search results does not show identifier correctly
- This seems to be related to this ticket: #7375
- 12:53 PM bug #10293: Person search results does not show identifier correctly
- I give this ticket to you Andreas because of the not completely initialized identifiers returned by the AdvancedBeanI...
- 10:12 AM bug #10293: Person search results does not show identifier correctly
- Debugging the portal code shows that the WS result does not contain the type of the identifier and therefore only the...
- 10:10 AM bug #10293 (Worksforme): Person search results does not show identifier correctly
- mail WHK:
Hallo Katja,
die Autorenseite anschauend (https://www.phycobank.org/cdm_dataportal/search/agent/?mar...
03/28/2023
- 10:46 PM bug #10269 (Closed): Selecting existing name for typification
- Wolf-Henning Kusber wrote in #note-13:
> On an small screen the red text is hard to read. Is it possible to set the ... - 01:58 PM bug #10269: Selecting existing name for typification
- Implemented as expected.
On an small screen the red text is hard to read. Is it possible to set the Warning Bold? - 03:33 PM Revision f57d850e (cdm-vaadin): ref #10269 change color for warning from tomato to red
- 09:44 AM bug #10292: Filter Metadata from Cdm Instance and from MediaServer
- mail NoK:
ich bin mir nicht komplett sicher, aber ich denke, bis auf allenfalls wenige Ausnahmen in 2021 (wo ich mög...
03/27/2023
- 03:52 PM bug #10292 (In Progress): Filter Metadata from Cdm Instance and from MediaServer
- 03:36 PM bug #10292: Filter Metadata from Cdm Instance and from MediaServer
- Please link to the old related ticket from last milestone
- 02:23 PM bug #10292 (Duplicate): Filter Metadata from Cdm Instance and from MediaServer
- Currently only the metadata from Media Server are filtered, this results in duplicated metadata caused by different l...
- 03:38 PM feature request #10240: Improve DOI formatting for references
- We also need a method to get an html representation of the source (see sourceAsHtml() in ManifestComposer/cdmlib-remote)
- 12:44 PM feature request #10288: Implement publisher and placePublished2 in TaxEditor
- To short the label I suggest to use "2nd ..."
- 11:23 AM feature request #10288 (In Progress): Implement publisher and placePublished2 in TaxEditor
- I think the second publisher information should be editable only if the first publisher/place published is available.
- 10:20 AM feature request #10288 (Resolved): Implement publisher and placePublished2 in TaxEditor
- this is implemented, please review.
- 12:37 PM task #8514 (Resolved): remove all PhycoBank redmine instances
- I guess this is fully implemented.
Katja, can you have a final look if AKs notes " Ein weiteres Ticket in dem alte ... - 12:29 PM feature request #10291 (In Progress): Implement second publisher information for bibliographic reference formatting and other remaining issues
- I will have a look. But please keep ticket assiged to you until all issues of the ticket are solved.
- 12:20 PM feature request #10291 (Feedback): Implement second publisher information for bibliographic reference formatting and other remaining issues
- A second place published and a second publisher is now implemented in the references formatting as long as there is a...
- 12:16 PM Revision ff9b4cc9 (cdmlib): ref #10291: Implement second place published and second publisher in
- references formatting
- 10:19 AM Revision 36a2a5f6 (taxeditor): ref #10288: add second publisher information to editor
03/25/2023
- 08:57 AM Revision 7e88f951 (cdmlib): handle null values in min/max values (still open for lower/upper boundary)
- 07:38 AM feature request #10245 (Closed): #9626 Implement publisher information for bibliographic reference formatting
- Remaining issues copied to #10291
- 07:33 AM bug #10269 (Resolved): Selecting existing name for typification
03/24/2023
- 04:20 PM Revision d0b5e93c (cdmlib): revert 8ee0f95cd3 due to unwanted code formatting
- 03:53 PM Revision ed302d40 (cdmlib): fix ReferencingObjectFormatter for Rights
- 02:55 PM bug #9766 (Closed): CDM vocabularies should not be editable
- 10:30 AM bug #9766: CDM vocabularies should not be editable
- When trying to movie a feature via context menu to "test" I got
~~~
java.lang.NullPointerException
at eu.etaxo... - 02:35 PM feature request #10245 (Resolved): #9626 Implement publisher information for bibliographic reference formatting
- Formatting of References when publisher or placed published are missing were adapted.
publisher2 and place publis... - 08:59 AM feature request #10245: #9626 Implement publisher information for bibliographic reference formatting
- A second publisher and placePublished is now available (see #10286). The formatting can be adapted accordingly.
- 02:34 PM feature request #10291 (Closed): Implement second publisher information for bibliographic reference formatting and other remaining issues
- Follow up from #10245
Also fix: "Formatting of References when publisher or placed published are missing". This ... - 02:30 PM Revision 8ee0f95c (cdmlib): ref #10245: formatting when publisher or place published is missing
- 12:37 PM Revision 219028f9 (taxeditor): fix potential NPE
- 11:46 AM bug #10167 (Closed): Selecting an existing name and adding a new journal does not work for phycobank registration
- Andreas Müller wrote in #note-16:
> Maybe we still need to check if the journal editing rights are taken away from t... - 11:12 AM Revision c4555b9d (cdm-server): Merge branch 'release/5.36.0' into develop
- 11:12 AM Revision 736be642 (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 11:11 AM Revision d9e0a4b6 (cdm-server): updating poms for branch'release/5.36.0' with non-snapshot versions
- 11:11 AM Revision 1ab50543 (cdm-webapp): Merge branch 'release/5.36.0' into develop
- 11:11 AM Revision 3b672312 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 11:10 AM Revision a1de8410 (cdm-webapp): updating poms for branch'release/5.36.0' with non-snapshot versions
- 11:10 AM Revision d169e1ad (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.36.0
- 11:10 AM Revision 92b872af (cdm-vaadin): Merge branch 'release/5.36.0' into develop
- 11:10 AM Revision 38e045dd (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 11:09 AM Revision b70597e7 (taxeditor): Merge branch 'release/5.36.0' into develop
- 11:09 AM Revision 21b0112e (taxeditor): Merge branch 'release/5.36.0'
- 11:07 AM Revision 0490740f (cdm-vaadin): updating poms for branch'release/5.36.0' with non-snapshot versions
- 11:07 AM Revision e2cdc9db (cdm-vaadin): jenkins bumping cdmlib.version to 5.36.0
- 11:07 AM Revision d2c9ba9b (cdm-dataportal): Merge branch 'release/5.36.0' into develop
- 11:06 AM Revision 94e8767a (cdm-dataportal): updating poms for branch'release/5.36.0' with non-snapshot versions
- 11:06 AM Revision d4ae2e98 (cdm-dataportal): release-preparation: production level css
- 11:05 AM Revision 512dff36 (cdmlib): Updating develop poms back to pre merge state
- 11:05 AM Revision 515dd759 (cdmlib): Merge branch 'master' into develop
- 11:05 AM Revision ae90ab86 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 11:05 AM Revision 381ed920 (cdmlib): Merge branch 'release/5.36.0'
- 10:52 AM Revision b2937e68 (cdmlib): updating poms for branch'release/5.36.0' with non-snapshot versions
- 10:29 AM Revision 01a13a40 (cdmlib): fix potential NPE
- 10:23 AM Revision 374527c4 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.36.0-SNAPSHOT
- 10:23 AM Revision ba255c59 (cdm-webapp): updating poms for 5.37.0-SNAPSHOT development
- 10:23 AM Revision 1d330a22 (cdm-webapp): updating poms for 5.36.0 branch with snapshot versions
- 10:23 AM Revision e9af6a35 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.37.0-SNAPSHOT
- 10:23 AM feature request #10221 (Closed): Add form to edit the json file with cdmserver info
- Andreas Müller wrote in #note-16:
> The current implementation seems to destroy the order of the entries (at least i... - 12:03 AM feature request #10221 (Feedback): Add form to edit the json file with cdmserver info
- The current implementation seems to destroy the order of the entries (at least in some cases):
: jenkins bumping cdmlib.version to 5.36.0-SNAPSHOT
- 10:21 AM Revision 726eb358 (cdm-vaadin): updating poms for 5.37.0-SNAPSHOT development
- 10:21 AM Revision 80ee03a6 (cdm-vaadin): updating poms for 5.36.0 branch with snapshot versions
- 10:21 AM Revision ccd5e97f (cdm-vaadin): jenkins bumping cdmlib.version to 5.37.0-SNAPSHOT
- 10:20 AM Revision 1530c41a (cdm-server): updating poms for 5.37.0-SNAPSHOT development
- 10:20 AM Revision c272156e (cdm-dataportal): updating poms for 5.37.0-SNAPSHOT development
- 10:20 AM Revision 31cbe190 (taxeditor): Updated version in pom / project files to taxeditor version : 5.37.0-SNAPSHOT and cdmlib version : 5.37.0-SNAPSHOT
- 10:20 AM Revision 8010a75a (taxeditor): Updated version in pom / project files to taxeditor version : 5.36.0 and cdmlib version : 5.36.0
- 10:15 AM Revision d91e720b (cdmlib): updating poms for 5.37.0-SNAPSHOT development
- 09:59 AM Revision 560d226d (cdmlib): handle rights in ReferencingObjectFormatter
- 09:22 AM bug #8953: Focus not correctly evaluated for details view when switching between names
- ERS:
jetzt konnte ich es wieder rekonstruieren. Es hängt anscheinend mit der neuen Konstruktion einer homotypische... - 09:02 AM Revision 7ab5034a (taxeditor): ref #9766 adapt message for default term moving
- 08:59 AM feature request #10286 (Closed): Add publisher2 and placePublished2 to Reference
- 08:56 AM feature request #10260 (Closed): Add resolve mechanism to (external) identifiers
- 08:55 AM Revision 6de44d76 (cdmlib): ref #10260 add getter for url created by urlPattern
- 08:42 AM feature request #10289 (New): Allow editing urlPattern in IdentifierType in TaxEditor
- follow up for #10260
- 12:11 AM task #7192: DwC-A of phycobank names for GBIF
- The above issues seem to be fixed. The error report does not include any issues.
However, there are currently 6132...
03/23/2023
- 11:56 PM bug #10269 (Feedback): Selecting existing name for typification
- Please review.
- 11:37 PM bug #10269 (Resolved): Selecting existing name for typification
- Applied in changeset commit:cdm-vaadin|81e29f64521293f86c78c6deb172a9b7c3ac0f89.
- 12:08 AM bug #10269: Selecting existing name for typification
- In any case the curator has to fix the problem.
Currently the data entry by the submitter is aborted and the submitte... - 11:37 PM Revision 0eedbc5a (cdm-vaadin): cleanup
- 11:36 PM Revision 81e29f64 (cdm-vaadin): fix #10269 fix name should not be selectable for typification if not complete
- 10:39 PM feature request #10260 (Resolved): Add resolve mechanism to (external) identifiers
- Field added. Still need followup ticket.
- 09:30 PM Revision 4540b6b0 (cdmlib-apps): minor log4j2 issue
- 09:29 PM Revision 33f93632 (cdmlib-apps): fix person titleCache handling in BerlinModel import
- 09:28 PM Revision 406bec93 (cdmlib): remove unnecessary update script part
- 05:48 PM Revision 8954f1f7 (cdmlib): fix #10286 add publisher2 and placePublished2 (try again, cont. 3)
- 05:43 PM Revision 8d78f124 (cdmlib): fix #10286 add publisher2 and placePublished2 (try again, cont. 2)
- 05:34 PM Revision 63455873 (taxeditor): update test-h2 to v5.36.1 in taxeditor
- 05:33 PM Revision 5718eb89 (cdm-vaadin): update test-h2 to v5.36.1
- 05:32 PM Revision 74dd8092 (cdmlib): cleanup
- 05:31 PM Revision ccb96dc7 (cdmlib): fix #10286 add publisher2 and placePublished2 (try again, cont.)
- 05:31 PM Revision d8de50b4 (cdmlib): fix #10286 add publisher2 and placePublished2 (try again)
- 04:46 PM feature request #10288 (Closed): Implement publisher and placePublished2 in TaxEditor
- follow up for #10286
- 04:24 PM bug #10287: Remaining issues for Remote Server View
- I think we should try to implement it asap as this are only small issues and to fully close this issue. If it is more...
- 03:26 PM bug #10287 (Closed): Remaining issues for Remote Server View
- copied from #10221:
* ~~double click on a line in the table should open the form (same as context menu "edit")~~
... - 03:24 PM feature request #10221 (Resolved): Add form to edit the json file with cdmserver info
- The remaining issues will come to a new ticket.
- 03:15 PM feature request #10221: Add form to edit the json file with cdmserver info
- Katja Luther wrote in #note-12:
> Andreas Müller wrote in #note-8:
> > * maybe we should check if an entry is an ex... - 02:21 PM feature request #10221: Add form to edit the json file with cdmserver info
- Andreas Müller wrote in #note-8:
> * maybe we should check if an entry is an exact duplicate of another entry or at ... - 02:06 PM feature request #10221: Add form to edit the json file with cdmserver info
- Andreas Müller wrote in #note-8:
> * when deleting a record from the table the record is not removed fully but inste... - 11:43 AM feature request #10221: Add form to edit the json file with cdmserver info
- I would create a new Ticket and would fix it for the next release. This ticket I would close so that we can do the re...
- 03:13 PM Revision 875aa5c0 (taxeditor): ref #10221: add handling for same names
- 01:55 PM Revision d26ee030 (taxeditor): ref #10260 change identifierType in TaxEditor
- 01:46 PM Revision a5f29366 (cdm-vaadin): update test-h2 to v5.36
- 01:46 PM Revision e73c34a4 (cdm-vaadin): cleanup
- 01:43 PM Revision 2bcf811c (cdmlib): revert removing place published
- 01:38 PM feature request #10286 (Resolved): Add publisher2 and placePublished2 to Reference
- Applied in changeset commit:cdmlib|e403d89f3a7ac755dfb180ca9351482f8387c0d0.
- 12:01 PM feature request #10286 (In Progress): Add publisher2 and placePublished2 to Reference
- 08:48 AM feature request #10286 (Closed): Add publisher2 and placePublished2 to Reference
- ... references sometimes do have >1 publisher
copied from #10245 - 01:38 PM Revision 4a8d3749 (cdmlib): cleanup
- 01:38 PM Revision e403d89f (cdmlib): fix #10286 add publisher2 and placePublished2
- 01:09 PM Revision a0848a73 (cdmlib): ref #10260 change IdentifierType class in cdmlib and add urlPattern attribute
- 01:05 PM Revision 97863fae (taxeditor): ref #10221: add missing change sin CdmServerInfoCOnfig
- 12:55 PM bug #9766 (Resolved): CDM vocabularies should not be editable
- This is fixed, please review.
- 12:38 PM bug #9766 (Feedback): CDM vocabularies should not be editable
- Now it is (again?) possible to move a term from a non-CDM voc to a CDM-voc via d&d. I tried with "Delete2" from "Dele...
- 11:39 AM bug #9766 (Resolved): CDM vocabularies should not be editable
- Andreas Müller wrote in #note-12:
> Moving a term via context menu does not work anymore. I tried with multiple feat... - 12:54 PM Revision 19436c33 (taxeditor): ref #10221: some improvements for remote server view
- 12:45 PM Revision e66b3057 (taxeditor): ref #9766: fix to not allow d&d to default vocabulary
- 11:44 AM bug #10281 (Closed): TaxEditor extremely slow when using another language as default language
- It works as expected.
- 11:39 AM Revision bc30f990 (taxeditor): ref #9766: fix moving terms via menu
- 11:38 AM Revision f3e8dc28 (cdmlib-apps): ref #10260 change IdentifierType class in app-import
- 11:34 AM bug #10234 (Closed): MetaData of images coming from the new image server are not shown
- After some confusions because of different links in production and test, we could show, that the metadata for the ima...
03/22/2023
- 11:15 PM bug #10269: Selecting existing name for typification
- Wolf-Henning Kusber wrote in #note-7:
>...
> WHK: This is the only way to proceed. But my **question** is: Do we al... - 09:39 PM bug #9766 (Feedback): CDM vocabularies should not be editable
- 09:39 PM bug #9766: CDM vocabularies should not be editable
- Moving a term via context menu does not work anymore. I tried with multiple feature and state terms which do not belo...
- 09:49 AM bug #9766 (Resolved): CDM vocabularies should not be editable
- Missed to commit the changes and now also added that the standard vocabularies are not shown in the term choosing wiz...
- 07:09 PM bug #10234 (Feedback): MetaData of images coming from the new image server are not shown
- Do you still add the results of cichorieae testing to this ticket?
- 06:12 PM Revision b87e8ce9 (taxeditor): ref #9766 fix NPE in term search
- 06:11 PM Revision b63ad331 (taxeditor): cleanup
- 06:10 PM Revision e968031c (taxeditor): ref #10277: javadoc and gitignore
- 05:59 PM bug #5556 (Closed): Class Cast Exception in DefinedTermDaoImpl.getPartOf
- reviewed by reviewing #10277
- 10:25 AM bug #5556: Class Cast Exception in DefinedTermDaoImpl.getPartOf
- I guess this should be fixed now. Can you please review?
- 10:21 AM bug #5556 (Resolved): Class Cast Exception in DefinedTermDaoImpl.getPartOf
- Applied in changeset commit:cdmlib|9911282f76a46d2728fdb67476074376df81f745.
- 10:16 AM bug #5556 (In Progress): Class Cast Exception in DefinedTermDaoImpl.getPartOf
- Got a very similar problem again:
~~~
last remote service : http://132.248.13.83:8080/cdmserver/cdm_flora_mexico/... - 05:57 PM bug #10277 (Closed): HibernateSystemException and BridgeException not in taxeditor dependencies
- The issue is fixed by adding 2 missing libraries (in case a similar exception is thrown again), by fixing #5556 (the ...
- 05:44 PM bug #10277: HibernateSystemException and BridgeException not in taxeditor dependencies
- More research shows that the exception was thrown by hibernate search and a CCE during indexing:
~~~
org.springframe... - 05:37 PM bug #10277: HibernateSystemException and BridgeException not in taxeditor dependencies
- Generally the problem does only appear if NamedArea vocabularies are not handled correct in the CDM db. It happened a...
- 05:35 PM bug #10277: HibernateSystemException and BridgeException not in taxeditor dependencies
- Fixing the above dependency lead to a followup exception for another missing dependency. BridgeException in hibernate...
- 05:54 PM task #10285 (New): Catch hibernate search exception so hibernate search dependencies are not needed anymore
- copied from #10277
If hibernate search indexing throws an exception this may result in a HibernateSystemException... - 05:30 PM Revision d59bd53a (taxeditor): ref #10277: fix link to hibernate-search-engine file
- 05:20 PM Revision 2f31cf6f (taxeditor): add hibernate-search to gitignore
- 05:13 PM Revision 766393a3 (taxeditor): ref #10277: clean up pom
- 05:03 PM Revision f50744da (taxeditor): add hibernate-search
- 04:05 PM feature request #10284 (Closed): Allow term trees as filters for named area dialogues
- ... and others if others exist.
In future, the filter should only work on term trees.
This is needed for eFloraMex... - 04:03 PM task #10283 (New): Add mapping for non-mexican areas for eFloraMex
- ... as technical annotations for areas
- 03:53 PM feature request #10282 (New): Automatically add unique measurement unit in details view
- If a feature allows only a single measurement unit this should be automatically added to each new fact of this featur...
- 03:20 PM feature request #10245: #9626 Implement publisher information for bibliographic reference formatting
- Andreas Müller wrote in #note-22:
> Please also add a test with only the publisher given (without place published). ... - 01:32 PM bug #10281: TaxEditor extremely slow when using another language as default language
- This should be fixed. Please review.
Note: there is a lot more potential for performance improvement related to te... - 01:24 PM bug #10281 (Resolved): TaxEditor extremely slow when using another language as default language
- Applied in changeset commit:taxeditor|0c56e9e669af16bf4fa9db312d5a641ed099e399.
- 10:53 AM bug #10281: TaxEditor extremely slow when using another language as default language
- After fixing this we should also check, why the term tree editor is using this method so often. Why is it used e.g. w...
- 10:41 AM bug #10281 (Closed): TaxEditor extremely slow when using another language as default language
- e.g. when selectin Spanisch as "Term" language.
The reason for this seems to be call of `Preferences.getGlobalLang... - 01:28 PM Revision a55746f9 (cdmlib): ref #10234: the keyword-metadata still needed as long as it is not
- migrated
- 01:24 PM Revision db4c8d6d (taxeditor): cleanup
- 01:24 PM Revision 0c56e9e6 (taxeditor): fix #10281 fix caching for global language
- 11:44 AM task #10205 (Closed): Update GBIF import to modern json library.
- 10:22 AM Revision fc70fa41 (cdmlib): cleanup
- 10:20 AM Revision 9911282f (cdmlib): fix #5556 try to fix CCE in getPartOf and getKindOf
- 09:48 AM Revision c002440d (taxeditor): ref #9766: fix filter for terms
- 09:45 AM Revision 30f3710a (taxeditor): ref #9766: do not show standard vocabularies for moving term to
- 08:53 AM Revision 917e944d (taxeditor): ref #9766: moving default terms should not be possible.
- 08:47 AM bug #10274 (Closed): Opening a gathering event does not work in ReferencingObjectsView
- works as expected.
- 08:26 AM bug #10278 (Closed): Fix language selection for features in factual data view
- You have to open a new taxon then the change works without a restart of the editor (tested with nightly)
03/21/2023
- 11:35 PM bug #10274: Opening a gathering event does not work in ReferencingObjectsView
- I tested with person "GatheringEvent Tester" in rem_conf_am and it worked. Can you also review?
- 11:25 PM bug #9766 (Feedback): CDM vocabularies should not be editable
- Drag&drop from and to CDM vocabularies is still possible. Move to ... I could not check as there was an NPE in the pa...
- 11:22 PM Revision 8b5235cf (taxeditor): fix NPE in StoreUtil.compareBySearchString
- 11:22 PM Revision 1f4038c2 (taxeditor): cleanup
- 11:14 PM bug #10278 (Feedback): Fix language selection for features in factual data view
- Seems to work after restart of the editor. Please decide if it is simple to make it work also without restarting. If ...
- 12:45 PM bug #10278 (Resolved): Fix language selection for features in factual data view
- I guess this is fixed and can be reviewed.
- 12:44 PM bug #10278 (Closed): Fix language selection for features in factual data view
- 10:49 PM feature request #10221 (Feedback): Add form to edit the json file with cdmserver info
- Generally it works. Some minor issues:
* ~~the table should include the "check cdmlib version" value~~
* ~~the defau... - 12:01 PM feature request #10221: Add form to edit the json file with cdmserver info
- please review, the json file is now well formatted as well.
- 04:19 PM bug #10277: HibernateSystemException and BridgeException not in taxeditor dependencies
- Can you send me the stacktrace and can you check locally in your IDE if the class is available. From the stacktrace c...
- 03:54 PM bug #10277 (Feedback): HibernateSystemException and BridgeException not in taxeditor dependencies
- Unfortunatly I got this exception again with nightly and the flora mexico instance on test.
- 03:49 PM bug #10280 (Closed): Translation of bibliography does not work for feature list on taxon page
- After translation of bibliography only the label of the block is correctly shown, the label of the item list is still...
- 03:25 PM task #10205 (Resolved): Update GBIF import to modern json library.
- I checked the actual files with the files before reverting the json lib removing and checked the import, which still ...
- 02:15 PM bug #10234 (Resolved): MetaData of images coming from the new image server are not shown
- default values are adapted, I will copy the production db to test and then you can test with Abutilon theophrasti and...
- 01:14 PM bug #10234: MetaData of images coming from the new image server are not shown
- I need to adapt the default value for the preference, then we can close this ticket. I will do that today.
- 02:11 PM Revision b81c22fd (cdmlib): ref 10234: adapt preference default value to new meta data key names
- 01:21 PM bug #10279 (New): It should be possible to add nomenclatural reference in wizard for new name
- mail ERS:
Hallo Andreas,
ich habe eine technische Frage zum TaxEditor:
Wenn ich ein Homonym hinzufüge, das n... - 01:19 PM task #10249: Mapping for metadata labels of images in portal
- There is an enumeration for the default labels, but we should think about a solution which holds the label of the met...
- 01:11 PM bug #8953: Focus not correctly evaluated for details view when switching between names
- ERS:
was ich meine ist dieses (siehe screenshot)
die hellblaue Tönug unter Nardurus orientalis verleitet mich zu de... - 12:33 PM Revision 8f346bc4 (taxeditor): ref #10221: save the json file in human readable form
- 11:27 AM Revision 5d4b8cfa (taxeditor): fix term representation
03/20/2023
- 09:52 PM bug #10277 (Resolved): HibernateSystemException and BridgeException not in taxeditor dependencies
- I tried to fix this by adding the spring-orm dependency. Please review.
In the long run we should try to find a wa... - 09:42 PM bug #10277 (Closed): HibernateSystemException and BridgeException not in taxeditor dependencies
- ~~~
last remote service : http://132.248.13.83:8080/cdmserver/cdm_flora_mexico/remoting/taxonnode.service
last remo... - 09:49 PM Revision caf9b097 (taxeditor): ref #10277 try to fix HibernateSystemException handling
- 06:04 PM task #9975: Create new UML diagramms for the CDM
- Remove all not necessary files from https://cybertaxonomy.org/cdm-uml/v532/ (e.g. all java files)
- 06:02 PM task #9975 (Feedback): Create new UML diagramms for the CDM
- 06:01 PM task #9975: Create new UML diagramms for the CDM
* clicking 2x on the diagram symbol  should not remove the diagram
* the clicke...- 04:57 PM task #9975: Create new UML diagramms for the CDM
- Some issues:
* root node should not expandable/collapsable
* the following symbol does not seem to have an (importa... - 03:52 PM task #10205: Update GBIF import to modern json library.
- Is this for final review?
- 03:49 PM feature request #10221: Add form to edit the json file with cdmserver info
- Is this for review already?
- 03:00 PM feature request #10245: #9626 Implement publisher information for bibliographic reference formatting
- Please also add a test with only the publisher given (without place published). This case currently seems not to be i...
- 02:57 PM feature request #10245 (Feedback): #9626 Implement publisher information for bibliographic reference formatting
- According to the data model also journals and print series have a publisher. Can you please discuss with Norbert if t...
- 02:42 PM feature request #10245: #9626 Implement publisher information for bibliographic reference formatting
- Implementation is ok for book and booksection. I added tests for generic, cd and thesis and added implementaton for r...
- 02:53 PM Revision 6baebe22 (cdmlib): ref #10245 fix publisher handling for report and proceedings
- 02:39 PM Revision 2834e6a1 (cdmlib): ref #10245 add publisher handling and/or testing for generic, thesis, report, map, database cdDvd
03/17/2023
- 07:47 PM bug #10276 (New): Cleanup person data with undefined information
- Since using the new person data model with defined nomenclaturalTitle and collectorTitle there is some data that has ...
- 03:45 PM bug #10274 (Resolved): Opening a gathering event does not work in ReferencingObjectsView
- Applied in changeset commit:cdmlib|c0e2367321a9e230f5454ea1e0e736a0da75374c.
- 01:08 PM bug #10274: Opening a gathering event does not work in ReferencingObjectsView
- The related code seems to be here:
~~~
public List<FieldUnit> findFieldUnitsForGatheringEvent(UUID gatheringE... - 01:04 PM bug #10274 (Closed): Opening a gathering event does not work in ReferencingObjectsView
- still need to check if this is a cdmlib issue.
Happened while trying to open the GE related to team ("Thomas D, Pers... - 03:45 PM Revision c0e23673 (cdmlib): fix #10274 hopefully fix class type issue in OccurrenceDaoHibernateImpl.findFieldUnitsForGatheringEvent()
- 02:32 PM bug #10275 (New): Improve term tree in preferences
- The term tree of preference pages is very slow for large vocabularies, this needs to be fixed.
There are some other... - 01:16 PM Revision 202889e9 (cdmlib): ref #10037: use host.docker.internal as host and send mail again
- 11:46 AM bug #10269: Selecting existing name for typification
- WHK: no changes in the user-rights, the references of stored names (as names only) should be completed on the PhycoBa...
- 11:27 AM Revision 3bbc8d2a (cdmlib): ref #10245: add publisher information for book section
03/16/2023
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