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task #7192

DwC-A of phycobank names for GBIF

Added by Andreas Kohlbecker almost 3 years ago. Updated almost 3 years ago.

Status:
Feedback
Priority:
Highest
Category:
-
Target version:
-
Start date:
01/16/2018
Due date:
% Done:

40%


Description

The below request URI triggers the export with following settings:

  • doMisapplieds=false
  • doSynonyms=true
  • doImages=false
  • doDescriptions=false
  • doDistributions=false
  • doVernaculars=false
  • doTypesAndSpecimen=true
  • doResourceRelations=true
  • doReferences=true
  • withHigherClassification=true
  • includeHeader=true

http://test.e-taxonomy.eu:80/cdmserver/phycobank/dwca/dwcaTaxExport?doMisapplieds=false&doSynonyms=true&doImages=false&doDescriptions=false&doDistributions=false&doVernaculars=false&doTypesAndSpecimen=true&doResourceRelations=true&doReferences=true&withHigherClassification=true&includeHeader=true


Related issues

Related to Edit - bug #7161: DwC-A meta.xml file csv file references invalid Closed 01/09/2018
Related to Edit - bug #7175: DwC-A export optionally filters by published flag Closed 01/15/2018
Related to Edit - bug #7160: DwC-A meta.xml file has wrong file extension Closed 01/09/2018

History

#1 Updated by Andreas Kohlbecker almost 3 years ago

  • Description updated (diff)

#2 Updated by Andreas Kohlbecker almost 3 years ago

  • Description updated (diff)

#4 Updated by Andreas Kohlbecker almost 3 years ago

  • Related to bug #7161: DwC-A meta.xml file csv file references invalid added

#5 Updated by Andreas Kohlbecker almost 3 years ago

  • Related to bug #7175: DwC-A export optionally filters by published flag added

#6 Updated by Andreas Kohlbecker almost 3 years ago

  • Related to bug #7160: DwC-A meta.xml file has wrong file extension added

#7 Updated by Andreas Kohlbecker almost 3 years ago

  • Description updated (diff)

#8 Updated by Andreas Kohlbecker almost 3 years ago

The export looks ok, but produces the following warnings on data problems

Warnings:
=========
No rank available for Laurencia subgen. Chondrophycus Tokida & Y.Saito(1166)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)]
No rank available for Cymbella subgen. Cymbopleura Krammer(1242)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)]
No rank available for Chaetoceros sch?ttii var. circinalis Meunier(727)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)]
No rank available for Desmidiales s.l.(1833)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)]
No rank available for Bacillariophyta, incertae sedis(2023)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)]
No rank available for Chlorophyta, incertae sedis(2026)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)]
There is a taxon without sec Micrhystridium Deflandre sec. ???(1964)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:200)]
There is a taxon without sec Meredithia compaginata G.W.Saunders sec. ???(2158)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:200)]

@Henning: Please can you fix these problems in the data if possible?

#9 Updated by Andreas Kohlbecker almost 3 years ago

  • Status changed from New to Feedback
  • Assignee changed from Andreas Kohlbecker to Wolf-Henning Kusber
  • Priority changed from New to Highest

#10 Updated by Andreas Kohlbecker almost 3 years ago

  • % Done changed from 0 to 40

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