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task #7192
openDwC-A of phycobank names for GBIF
Status:
Feedback
Priority:
Highest
Assignee:
Category:
data
Target version:
Start date:
Due date:
% Done:
40%
Estimated time:
Severity:
normal
Description
The below request URI triggers the export with following settings:
- doMisapplieds=false
- doSynonyms=true
- doImages=false
- doDescriptions=false
- doDistributions=false
- doVernaculars=false
- doTypesAndSpecimen=true
- doResourceRelations=true
- doReferences=true
- withHigherClassification=true
- includeHeader=true
Related issues
Updated by Andreas Kohlbecker about 6 years ago
- Related to bug #7161: DwC-A meta.xml file csv file references invalid added
Updated by Andreas Kohlbecker about 6 years ago
- Related to bug #7175: DwC-A export optionally filters by published flag added
Updated by Andreas Kohlbecker about 6 years ago
- Related to bug #7160: DwC-A meta.xml file has wrong file extension added
Updated by Andreas Kohlbecker about 6 years ago
The export looks ok, but produces the following warnings on data problems
Warnings: ========= No rank available for Laurencia subgen. Chondrophycus Tokida & Y.Saito(1166)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)] No rank available for Cymbella subgen. Cymbopleura Krammer(1242)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)] No rank available for Chaetoceros sch?ttii var. circinalis Meunier(727)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)] No rank available for Desmidiales s.l.(1833)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)] No rank available for Bacillariophyta, incertae sedis(2023)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)] No rank available for Chlorophyta, incertae sedis(2026)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:243)] There is a taxon without sec Micrhystridium Deflandre sec. ???(1964)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:200)] There is a taxon without sec Meredithia compaginata G.W.Saunders sec. ???(2158)[handleTaxonBase(eu.etaxonomy.cdm.io.dwca.out.DwcaTaxonExport:200)]
@Henning: Please can you fix these problems in the data if possible?
Updated by Andreas Kohlbecker about 6 years ago
- Status changed from New to Feedback
- Assignee changed from Andreas Kohlbecker to Wolf-Henning Kusber
- Priority changed from New to Highest
Updated by Andreas Müller about 1 year ago
- Tags set to phycobank
- Project changed from PhycoBank to EDIT
- Category set to data
- Target version set to Phycobank ready for submitters
- Severity set to normal
Do these data issues still need to be fixed?
Updated by Andreas Müller 12 months ago
The above issues seem to be fixed. The error report does not include any issues.
However, there are currently 6132 entries in coreTax which seems to be too large.
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