Activity
From 01/16/2024 to 02/14/2024
02/14/2024
- 11:54 PM feature request #8144: Check if modifiers and modifyingText is handled correctly for description elements in data portals
- Remaining issue from last milestone.
- 11:26 PM feature request #10156: Show field unit media in taxon image galleries
- As this is related to specimen and media gathering I move it to current milestone.
- 11:19 PM task #10249: Mapping for metadata labels of images in portal
- Is this still an open issue or is it fixed with #10440. If not can you leave a message what is still open?
- 11:15 PM feature request #10289: Allow editing urlPattern in IdentifierType in TaxEditor
- This should be very fast to implement therefore move it to current milestone.
- 11:01 PM feature request #461: Improve / compact display of types
- This is closely related or a duplicate for #9940 and maybe also #7696. Therefore move it to current milestone.
- 11:00 PM task #9940: Handle type category formatting in compact typification strings
- This is closely related to switching to the new taxon pages. Therefore move it to current milestone.
- 10:58 PM feature request #7696: use compact type representations in the synonymy as provided by the typedesignations/byTaxon/{taxon_uuid} service
- This will be automatically fixed with the new taxon pages (#10322). Therefore move to current milestone.
- 10:56 PM feature request #1872: CICHORIEAE additional text to descriptive data
- As KL recently also worked on this issue I move it to the current milestone so we can maybe close it soon.
- 10:54 PM task #4911: improve performance of distributionInfoFor service
- The remaining issues here are probably mostly duplicating #9524.
- 10:43 PM bug #7045 (In Progress): portal/classification/{uuid}/childNodesOf/{uuid} service slow
- 10:41 PM bug #9015: Comparator for Character Matrix creates strange result
- Needs to be reviewed and moved to its old milestone.
- 10:14 PM task #10239 (In Progress): Caucasus databases and portals available
- 10:05 PM bug #9608: UriUtils to use HTTP HEAD requests where possible
- As this is related to #9610 can you have a look if this is still open?
- 10:04 PM bug #9610 (Feedback): MediaMetadataFileReader (formerly in CdmImageInfo) loads same image file multiple times
- As far as I remember we have worked on this some time ago. Can you please check if you think that this still happens?
- 09:58 PM bug #10223: References for lectotypes should have short references, not full authorship
- This might be automatically fixed by implementing #10322 and #9596
- 09:57 PM task #10236: Import data from caucasus DB to E+M
- Asked ERS+NaK if we can close this ticket as Rejected
- 09:48 PM bug #10365: Selecting NamedArea tree in distribution preference does not work for distribution editor
- Can you check the above mail so we can close this ticket soon (also move to according milestone, then)
- 09:28 PM feature request #10351: Geosearch with full taxon tree result, eventually printer friendly
- Remove target version as this is a duplicate.
- 09:27 PM feature request #10367: Add citationMicroReference to description of sources in ReferencingObjectsView
- This has been fixed in July 23 already so I change target version.
- 08:36 PM Revision 054d0e55 (taxeditor): ref #10322 adapt taxeditor to DTO changes (cont. II)
- 06:24 PM Revision e0bcc4e4 (taxeditor): ref #10322 adapt taxeditor to DTO changes (cont.)
- 06:15 PM Revision e70815ab (taxeditor): ref #10322 adapt taxeditor to DTO changes
- 05:58 PM Revision 98838e7c (cdm-vaadin): ref #10322 adapt vaadin to RegistrationDTO changes
- 05:18 PM Revision 2607342d (cdmlib): cleanup
- 05:17 PM Revision 7e42adef (cdmlib): Remove old FeatureDto_.java
- 05:17 PM Revision 80d1906f (cdmlib): ref #10322 split service DTOs to api DTOs and Loaders for specimen related DTOs; use SpecimenDTO in TaxonPortalDto
- 03:58 PM Revision 0bcabde1 (cdm-dataportal): ref #10322: avoid error messages - continue
- 03:44 PM Revision 21c726e4 (cdm-dataportal): ref #10322: avoid error messages - continue
- 02:48 PM bug #10471: Cloning typedesignation does not work
- This problem appeared after Maryam created a new Typedesignation and a second one using the clone functionality. Afte...
- 02:29 PM Revision afbfad1b (cdm-dataportal): ref #10322: avoid error messages - continue
- 01:20 PM bug #10355 (Closed): Caryophyllales Mexico and Caryophyllales Caryophyllales not usable with clean urls
- This is fixed by adding it to .htaccess
- 11:13 AM Revision 98f10999 (cdm-dataportal): ref #10322: avoid error messages
- 09:33 AM Revision 0ac5bb2d (cdm-dataportal): ref #10322: avoid undefined properties or variables
02/13/2024
- 02:42 PM Revision 7fcd1fe3 (cdm-dataportal): ref #10322: handle description facts
- 02:42 PM Revision 27faaab1 (cdm-dataportal): show messages from dto
- 02:42 PM Revision 0925e765 (cdm-dataportal): fix secundum reference with footnote in dto page
- 01:50 PM Revision ce907050 (cdmlib): ref #10271 handle CURI identifiers separately
- 01:33 PM Revision def9a5be (cdmlib): add EntityReference for secundum
- 10:37 AM feature request #9982 (Duplicate): Show links for sec references
- This seems to be a duplicate for #10127
02/12/2024
- 11:38 PM Revision 404beffb (cdmlib): ref #10271 handle ipni, tropicos and index fungorum identifiers
- 04:18 PM task #10322: Use DTOs for portal taxon page (cont.)
- For the error handling I would add a drupal message with the type which comes with the messages of the portal-dto:
!... - 03:08 PM task #10322: Use DTOs for portal taxon page (cont.)
- checked whether tabbed page is available for new taxon page -> yes
checked for typedesignations:
created two dummy ... - 02:45 PM Revision bcf1578a (cdmlib): do not use feature if not contained in feature map
- 02:20 PM Revision 0c7110dd (taxeditor): in bulkeditor remove label title cache in search
02/07/2024
- 12:16 PM Revision 4d1aeb6c (taxeditor): ref #6554: add old dto combo method to formFactory
- 11:55 AM Revision 66b8cde4 (taxeditor): ref #6554: add dto comparator
- 11:55 AM Revision 0db555e2 (taxeditor): ref #6554: avoid ws for rank combo
- 09:45 AM feature request #6554: The details views are newly created with every change of the focus
- Patrick Plitzner wrote in #note-4:
> The performance loss is separated in two areas:
>
> 1. SWT/UI rendering
> ...
02/06/2024
- 11:36 AM bug #10471 (New): Cloning typedesignation does not work
- mail MM:
I want to duplicate the type information for Limonium ×interjectum in Caryophyllales database.
I added ...
02/05/2024
- 08:04 AM feature request #9500 (Feedback): Allow removing certain distribution status from distribution publication
- Currently there is no test with a status tree != null, we should add a test for the status tree. But the code looks g...
02/02/2024
- 04:34 PM feature request #8144: Check if modifiers and modifyingText is handled correctly for description elements in data portals
- move it to 5.43 for a final check whether everything is covered, if this is the case move it back to 5.42
- 04:33 PM bug #10456 (Closed): Specimen Table view does not show all typedesignations
- Type specimen are shown for accepted and all synonyms, so we can close the ticket.
- 04:27 PM bug #10440 (Closed): Still some problems with metadata of images in portal
- created a follow up ticket and close this ticket
- 04:26 PM bug #10470 (New): Improve media metadata preference page
- see https://dev.e-taxonomy.eu/redmine/issues/10440#note-42
and the handling if copyright information comes from me... - 04:25 PM feature request #10448 (Closed): Implement WFO Backbone export in TaxEditor
- 04:24 PM bug #10469 (New): Remember the sourceLinkBaseUrl
- see https://dev.e-taxonomy.eu/redmine/issues/10448#note-27
- 12:10 PM bug #10466: Open issues in logfiles
- Please check in log files if the error is still in log files.
- 10:29 AM bug #10466 (Resolved): Open issues in logfiles
- This should be fixed.
- 10:23 AM Revision a604d4c8 (cdmlib): ref #10424 make getDefaultDescription transient
- 08:30 AM Revision ba915f71 (taxeditor): adapt master to develop
- 01:35 AM Revision 2624e03d (cdm-server): Merge branch 'release/5.42.0' into develop
- 01:35 AM Revision eac3830e (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 01:34 AM Revision 21273cce (cdm-server): updating poms for branch'release/5.42.0' with non-snapshot versions
- 01:34 AM Revision 978d9659 (cdm-webapp): Merge branch 'release/5.42.0' into develop
- 01:34 AM Revision 7505e8f4 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 01:34 AM Revision bec62358 (cdm-webapp): updating poms for branch'release/5.42.0' with non-snapshot versions
- 01:33 AM Revision fcf16708 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.42.0
- 01:30 AM Revision 8c9e1d3c (cdm-vaadin): Merge branch 'release/5.42.0' into develop
- 01:30 AM Revision 95f2b5d6 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 01:30 AM Revision 37ba28f9 (taxeditor): Merge branch 'release/5.42.0' into develop
- 01:30 AM Revision ab08477f (taxeditor): Merge branch 'release/5.42.0'
- 01:27 AM Revision 00dc2caf (cdm-dataportal): Merge branch 'release/5.42.0' into develop
- 01:27 AM Revision f76ef079 (cdm-vaadin): updating poms for branch'release/5.42.0' with non-snapshot versions
- 01:27 AM Revision eef7c1af (cdm-dataportal): updating poms for branch'release/5.42.0' with non-snapshot versions
- 01:27 AM Revision 7cd31ea2 (cdm-vaadin): jenkins bumping cdmlib.version to 5.42.0
- 01:27 AM Revision bddcc18d (cdm-dataportal): release-preparation: production level css
- 01:26 AM Revision 59c76d0a (cdmlib): Updating develop poms back to pre merge state
- 01:26 AM Revision 8e02587a (cdmlib): Merge branch 'master' into develop
- 01:26 AM Revision 3e5a874d (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 01:26 AM Revision c0d2b0c9 (cdmlib): Merge branch 'release/5.42.0'
- 01:13 AM Revision b673dec1 (cdmlib): updating poms for branch'release/5.42.0' with non-snapshot versions
- 12:27 AM Revision a2380631 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.42.0-SNAPSHOT
- 12:27 AM Revision b9a49222 (cdm-webapp): updating poms for 5.43.0-SNAPSHOT development
- 12:27 AM Revision e92684f6 (cdm-webapp): updating poms for 5.42.0 branch with snapshot versions
- 12:26 AM Revision 3a5944f5 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.43.0-SNAPSHOT
- 12:26 AM Revision b7726f9c (taxeditor): Updated version in pom / project files to taxeditor version : 5.43.0-SNAPSHOT and cdmlib version : 5.43.0-SNAPSHOT
- 12:26 AM Revision a31431c6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.42.0 and cdmlib version : 5.42.0
- 12:24 AM Revision eca7ab70 (cdm-vaadin): jenkins bumping cdmlib.version to 5.42.0-SNAPSHOT
- 12:24 AM Revision 825ba6b6 (cdm-vaadin): updating poms for 5.43.0-SNAPSHOT development
- 12:24 AM Revision 133d0dec (cdm-vaadin): updating poms for 5.42.0 branch with snapshot versions
- 12:24 AM Revision 2e48cdd5 (cdm-vaadin): jenkins bumping cdmlib.version to 5.43.0-SNAPSHOT
- 12:24 AM Revision cf874b96 (cdm-dataportal): updating poms for 5.43.0-SNAPSHOT development
- 12:24 AM Revision 4f138c3a (cdm-server): updating poms for 5.43.0-SNAPSHOT development
- 12:20 AM Revision 098cfa85 (cdmlib): updating poms for 5.43.0-SNAPSHOT development
- 12:18 AM Revision 896bf130 (taxeditor): cleanu and add _WFO_ to WFO Content export file name
02/01/2024
- 11:40 PM Revision 9e5f18f8 (taxeditor): cleanup
- 11:12 PM Revision 89a9b872 (cdmlib): ref #10271 add IPNI normalizeAuthor to ColDP export
- 11:11 PM Revision 82a98476 (cdmlib): ref #10271 fix protectd titleCache handling in ColDP Export
- 10:50 PM Revision fda35d40 (cdmlib): ref#10446 normalize to IPNI standard
- 09:27 PM Revision 23302694 (cdmlib): ref#10446 fix original spelling handling and add test
- 06:15 PM feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
- Katja Luther wrote in #note-30:
> Andreas Müller wrote in #note-29:
> > Deselecting the zip option has no effect.
>
... - 12:07 PM feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
- Andreas Müller wrote in #note-29:
> Deselecting the zip option has no effect.
Now deselect zip works and if zip is s... - 10:02 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Deselecting the zip option has no effect.
- 01:37 AM feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
- 01:37 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Can we make the field larger as URLs are usually a bit longer.
This generally works. However, we could try to save... - 05:50 PM bug #10440: Still some problems with metadata of images in portal
- There is a scrollbar for the table now which is activated after adding a new term, which is good.
But when reducing ... - 05:44 PM bug #10440 (Feedback): Still some problems with metadata of images in portal
- Is there a reason why there is so much empty space above the add/remove buttons?
: Still some problems with metadata of images in portal
- Tested again and for cichorieae and cyprus it works as expected.
- 05:30 PM Revision ab840749 (cdmlib): ref#10446 fix compile error and orth. var. selection
- 05:12 PM bug #10468: Image reference want to display a non-existing media specimen in PhycoBank user portal
- The output in the portal was correct until now. It seems that the database expect a media item, if the type is a publ...
- 05:09 PM bug #10468: Image reference want to display a non-existing media specimen in PhycoBank user portal
- We still need to check if this is a formatting (cdmlib) issue or a dataportal issue. But probably it is cdmlib.
- 04:23 PM bug #10468 (New): Image reference want to display a non-existing media specimen in PhycoBank user portal
- Display in Vaadin is correct:
Lectotype for: Chlorosphaera antarctica Fritsch (http://phycobank.org/104339)
Souther... - 05:06 PM Revision 93381f97 (cdmlib): ref#10446 add warning for missing wfo-id for orth.var. etc.
- 03:07 PM feature request #10446 (Resolved): WFO Backbone export
- The base import is implemented. However, we will need a follow up ticket for open issues.
- 03:03 PM feature request #10459 (Closed): Add taxon-specimen association filter for taxon pages
- 11:18 AM feature request #10459 (Resolved): Add taxon-specimen association filter for taxon pages
- Sorry, hopefully everything is correct now.
- 10:42 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- In "If nothing is selected all related specimen are displayed" please use correct plural for specimen **s** .
- 10:39 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Taxon Fact has a dot at the end. Others don't please do consistent. I think in this case it is better without dot.
- 10:39 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Katja Luther wrote in #note-15:
> Andreas Müller wrote in #note-6:
> > If possible it should be either CDET or DET,... - 10:18 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Andreas Müller wrote in #note-7:
> The documentation should use the same labels as in the selection, not as used as ... - 10:18 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Andreas Müller wrote in #note-5:
> The title of the configuration should end with ":" not "."
This is fixed. - 10:17 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Andreas Müller wrote in #note-6:
> If possible it should be either CDET or DET, not both. So selecting 1 should dese... - 09:37 AM feature request #10459 (Feedback): Add taxon-specimen association filter for taxon pages
- The labels are adapted but there are some more open issues starting at #note-5. Can you please implement or leave a m...
- 09:23 AM feature request #10459 (Resolved): Add taxon-specimen association filter for taxon pages
- The settings are adapted. Please have a last short look and then we can close this ticket
- 02:16 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- "If nothing is selected all related specimen are displayed" => it might be discussed if this is really an intuitive b...
- 02:15 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Functionality works as expected, so ticket can be closed once the minor above issues are fixed.
- 01:55 AM feature request #10459 (Feedback): Add taxon-specimen association filter for taxon pages
- Please use either plural or singular. Currently it is a mix.
- 01:54 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- We may think about renaming Ind. Ass. Should we better use "Taxon Fact"? As this is where it is stored. Users using "...
- 01:53 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- The documentation should use the same labels as in the selection, not as used as inner variables (this is also an iss...
- 01:51 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- If possible it should be either CDET or DET, not both. So selecting 1 should deselect the other one. But only if this...
- 01:48 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- The title of the configuration should end with ":" not "."
- 01:47 AM feature request #10459: Add taxon-specimen association filter for taxon pages
- Please always provide links to examples to make reviewing easier.
https://test.e-taxonomy.eu/dataportal/preview/cich... - 02:54 PM Revision f0b9227b (cdmlib): ref#10446 adapt base url handling in tests (cont.)
- 02:49 PM Revision d918dea8 (cdmlib): ref #10440: revert add copyright and copyrightNotice to default values
- 02:49 PM Revision 5317996e (cdmlib): ref #10440: handle copyright same as other metadata
- 02:15 PM Revision 41cfa80b (cdmlib): ref#10446 adapt base url handling in tests
- 01:06 PM Revision e46be992 (cdmlib): ref #10440: add CopyrightNotice to the default values for metadata
- 12:05 PM Revision c14e4ef0 (taxeditor): ref #10448: fix zip handling and better naming for wfo backbone export
- 11:34 AM Revision d69862e3 (cdmlib): ref#10446 add names only handling
- 11:15 AM Revision c68d93cb (cdm-dataportal): ref #10459: adapt settings text -continue
- 11:10 AM Revision 20d6488a (cdm-dataportal): ref #10459: adapt settings text -continue
- 11:09 AM Revision b02daac5 (cdmlib): ref#10446 warning for missing base url
- 10:55 AM feature request #9500: Allow removing certain distribution status from distribution publication
- I moved open issues to #10467. Can you do a final review and close if appropriate.
- 12:17 AM feature request #9500: Allow removing certain distribution status from distribution publication
- Andreas Müller wrote in #note-32:
> The same still needs to be implemented for print publication (CdmLight, CsvNameE... - 10:51 AM feature request #10467 (New): Distribution status filter for exports
- Copied from #9500
This needs to be implemented in the configurators, export routines and the TaxEditor assistent.
... - 10:17 AM Revision c2dba8bd (cdmlib): ref#10446 adapt ref uri handling
- 10:15 AM Revision 72a5e871 (cdm-dataportal): ref #10459: adapt settings text -continue
- 10:03 AM Revision 56d8697c (cdm-dataportal): ref #10459: adapt settings text -continue
- 10:02 AM bug #10463 (Closed): Disallow changing DB when switching user in TaxEditor
- I think we can close it.
- 09:52 AM Revision 3036572e (cdmlib): ref#10446 adapt no-wfoid message
- 09:40 AM bug #10397: Moving a specimen imported via ABCD to a new taxon does not show the specimen on the new taxon page but on the old one
- Katja Luther wrote in #note-18:
> Andreas Müller wrote in #note-15:
> > This seems to be mostly implemented as 3 of... - 09:34 AM bug #10397 (Closed): Moving a specimen imported via ABCD to a new taxon does not show the specimen on the new taxon page but on the old one
- Andreas Müller wrote in #note-15:
> This seems to be mostly implemented as 3 of 4 solutions are implemented. The ope... - 01:15 AM bug #10397 (Feedback): Moving a specimen imported via ABCD to a new taxon does not show the specimen on the new taxon page but on the old one
- This seems to be mostly implemented as 3 of 4 solutions are implemented. The open solutions is maybe not so important...
- 09:28 AM bug #8591 (Closed): Multiple representations problem on setting synonym as basionym
- I tried all issues mentioned above but could not reproduce any of them, so I think we can close this ticket.
- 01:07 AM bug #8591 (Feedback): Multiple representations problem on setting synonym as basionym
- Can you please check how far this is solved. There is the "sync cache before saving" commit which may have solved the...
- 09:22 AM Revision c53f44c0 (cdm-dataportal): ref #10459: adapt settings text
- 08:40 AM Revision 4cbde9ef (cdmlib): ref#10446 fix remarks test for taxon notes feature
- 08:21 AM Revision 639ba316 (cdmlib): ref#10446 add remarks handling and remove synonyms without wfoId
- 01:27 AM feature request #8930 (Closed): Publishable objects should show icon if they are unpublished
- For now it looks ok and we can close the ticket.
- 01:20 AM bug #10441 (Closed): LIE in logfiles for DefinedTermBase.includes
- I copied the open issue to a new ticket: #10466
- 01:19 AM bug #10466 (Feedback): Open issues in logfiles
- copied from #10441
~~~
Caused by: org.hibernate.LazyInitializationException: failed to lazily initialize a colle... - 01:11 AM feature request #8144 (In Progress): Check if modifiers and modifyingText is handled correctly for description elements in data portals
- This seems to be at least in progress.
- 01:09 AM bug #10456 (Feedback): Specimen Table view does not show all typedesignations
- Is this still partly open? If yes, please add an open issues list.
- 01:08 AM bug #10225: MultipleRepresentationException when moving synonym in homotypic group
- The reason why this is maybe fixe could be the "sync cache before saving" commit for #8591
01/31/2024
- 11:54 PM feature request #10330 (Closed): Handle term tree distribution status for distributionInfo in dataportal
- So I guess we can close this ticket.
- 11:53 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- This should be fixed now. See #9500#note-34.
The above example works now with removing status "native"
 Abies alba link and removing "native" from the status tree. Again ...
- 02:16 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-24:
> Andreas Müller wrote in #note-23:
> > For some reason the maps are not shown if... - 02:12 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Can you add information which taxon you checked and which status you removed?
- 11:03 PM Revision 12ebfd05 (cdmlib): ref #9500, ref #10330 add term tree based test but still use partOf version to be tested as long as it still exists
- 11:02 PM Revision 8d731303 (cdmlib): javadoc and deprecation
- 10:38 PM Revision b6889ed7 (cdmlib): ref #9500, ref #10330 add test and handle null parent better
- 09:55 PM Revision d5d1935e (cdmlib): ref #9500, ref #10330 apply subarea preference rule to all ancestors, not only direct parents
- 09:51 PM feature request #9500: Allow removing certain distribution status from distribution publication
- It did not fully work yet for maps due to issues discussed in #10330.
The reason for this was that the subareaPrefer... - 09:45 PM Revision ae92b36b (cdmlib): cleanup
- 06:11 PM Revision 768bef8f (cdmlib): cleanup
- 02:48 PM bug #10454 (Closed): Original spelling should not be shown in taxon title
- The result looks as expected. So I guess we can close the issue.
- 02:16 PM bug #10454 (Resolved): Original spelling should not be shown in taxon title
- This is implemented, please review. I added an original spelling to Abies alba Mill. in EuroMed on test.
- 02:13 PM Revision 6a478377 (cdm-dataportal): ref #10454: check for nameInSource tag during title creation
- 01:52 PM feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
- This is implemented, please review.
- 11:46 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- We still need 1 more field which is now available in the configurator: sourceLinkBaseUrl
- 01:38 PM Revision c970f339 (cdmlib): avoid LIE
- 01:25 PM Revision 2e4849f9 (taxeditor): ref #10448: add base url text field
- 12:56 PM Revision dc7a637b (taxeditor): ref #10431: revert to restrictive deactivation
- 11:16 AM Revision 35e72e2c (cdmlib): ref #10446 fix fullSampleDataTest
- 10:49 AM Revision 71831080 (cdmlib): ref #10446 improve logging for missing wfo-ids and others
- 10:20 AM Revision c2206052 (cdmlib): ref #10446 remove duplicated missing wfo-id warning
- 10:18 AM Revision 98d189b2 (cdmlib): ref #10446 improve report formatting
- 02:14 AM Revision 2f98a4aa (cdmlib): ref #10446 fix statusNote i18n handling
- 01:40 AM Revision bea3a114 (cdmlib): ref #10446 cleanup doc
- 01:37 AM Revision 3e989f7d (cdmlib): ref #10446 handle excluded for WFO export and others
01/30/2024
- 11:54 PM Revision 52f7eb78 (cdmlib): ref #10446 fix synonym handling
- 07:12 PM Revision 1fed2f05 (cdmlib): ref #10446 fix test and add sourceLinkBaseUrl handling
- 06:38 PM Revision 40dc1fd7 (cdmlib): ref #10446 update javadoc for source link base url
- 06:33 PM Revision ac6a7bfb (cdmlib): ref #10446 override testFullSampleData as fullSampleData test must throw a warning
- 06:32 PM Revision 1b805359 (cdmlib): ref #10446 add source link export and move created, modified source link and excluded info to handleTaxon()
- 06:13 PM Revision 8a8ccf36 (cdmlib): ref #10446 javadoc ticket backlink
- 06:09 PM Revision c33df066 (cdmlib): ref #10446 fix WFO Backbone export and tests
- 04:03 PM bug #10463: Disallow changing DB when switching user in TaxEditor
- Katja Luther wrote in #note-6:
> Did some code cleanup.
So should we close the ticket now or is there more code t... - 02:57 PM bug #10463: Disallow changing DB when switching user in TaxEditor
- Did some code cleanup.
- 02:56 PM Revision c8b9cfaa (taxeditor): ref #10463: cleanup
- 02:34 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Franck Theeten found out that a parameter is missing:
It seems that the parameter in “ad” was missing for the “f” c... - 09:55 AM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- I could reproduce the problem, but still don't know why. The webservice is called, but it is no answer available and ...
- 12:07 PM feature request #10435 (Closed): Vaadin, add type after published registration of a scientific name
- 11:37 AM feature request #10435: Vaadin, add type after published registration of a scientific name
- I finally implemented it the way you requested first. By unlocking the published registration it is now also possible...
- 08:52 AM feature request #8930 (Resolved): Publishable objects should show icon if they are unpublished
- The icon for the factual data view is adapted now, it's not perfect but better I think. The behavior of the tree is d...
- 08:30 AM Revision 7212a307 (taxeditor): ref #10441: add additional null check
- 12:12 AM Revision bfaeb529 (cdmlib): ref #10446 rename WfoClassification/Export... to WfoBackbone... (javadoc)
01/29/2024
- 11:47 PM task #10324 (Closed): Export Caucasus data
- All databases are exported
- 11:40 PM Revision e62fc863 (taxeditor): ref #10448 rename WFOExport -> WfoBackboneExport (cont.)
- 11:23 PM feature request #10448: Implement WFO Backbone export in TaxEditor
- WGB:
die offizelle WFO-Bezeichnung ist WFO Backbone, aber WFO-Plant List wäre auch korrekt, da der Backbone dort z... - 11:13 PM Revision 51b01eaf (taxeditor): ref #10448 rename WFOExport -> WfoBackboneExport
- 10:47 PM Revision 983ba2df (cdmlib-apps): minor
- 10:46 PM Revision b8784321 (cdmlib-apps): update pesi pom
- 10:45 PM Revision 73d363c5 (cdmlib-apps): minor
- 10:43 PM Revision 6ce20f96 (cdmlib-apps): ref #10446 rename WfoClassification/Export... to WfoBackbone... in app-import
- 10:41 PM Revision 41740bda (cdmlib): ref #10446 rename WfoClassification/Export... to WfoBackbone...
- 10:27 PM Revision ca071f41 (taxeditor): ref #10448 rename WFO classification -> WFO Backbone
- 10:22 PM Revision 04e239e5 (taxeditor): cleanup
- 05:43 PM bug #10465: Changing reference of sec source should clear name in source and detail
- AM:
hmm, sec-refs gebe ich selten ein, aber bei nom-refs würde ich selber das eigentlich nicht so gut finden, wenn... - 05:43 PM bug #10465: Changing reference of sec source should clear name in source and detail
- Katja Luther wrote:
> When changing or deleting reference of secundum source, the name in source and the detail shou... - 03:33 PM bug #10465 (New): Changing reference of sec source should clear name in source and detail
- When changing or deleting reference of secundum source, the name in source and the detail should be removed.
This ... - 04:02 PM Revision 487bc8a1 (taxeditor): ref #8930: larger image for unpublished descriptions
- 03:27 PM bug #10225 (Closed): MultipleRepresentationException when moving synonym in homotypic group
- I also could not reproduce it so we may close the ticket but reopen if it appears again.
- 03:20 PM Revision db5d440b (cdmlib): avoid NPE in RowWrapperDto - continue
- 03:18 PM Revision e1c1de70 (cdmlib): avoid NPE in RowWrapperDto
- 03:15 PM feature request #10436 (Closed): Make state modifiers invisible if no recommended term collection is selected
- works as expected
- 12:33 PM Revision 20babd79 (taxeditor): add new image
- 12:29 PM Revision 3a42bedc (taxeditor): clean up
01/28/2024
- 08:20 PM feature request #10464 (New): Spring boot and modern Spring composition
- Part of new architecture #10445
* https://start.spring.io/
* https://spring.io/guides/gs/spring-boot/
* embedded... - 10:16 AM Revision 3a682c8e (cdmlib): ref #10446 improve Wfo Classification Export and adapt tests (still ignored)
- 10:13 AM Revision 2adc43b9 (cdmlib): ref #10324 update childrenCount correctly in Cdm2CdmImportBase
01/26/2024
- 11:53 PM Revision 6a8e75a1 (cdmlib): fix subgenus abbreviation in test data
- 06:15 PM Revision 2118abfd (cdmlib): ref #10446 fix WfoClassificationExport and add test class (still ignored as tests need to be adapted) (cont.)
- 05:25 PM Revision baa09d99 (cdmlib): ref #10446 fix WfoClassificationExport and add test class (still ignored as tests need to be adapted)
- 02:56 PM feature request #10459 (Resolved): Add taxon-specimen association filter for taxon pages
- This is implemented.
- 01:48 PM Revision 87a449c4 (cdm-dataportal): ref #10459: fix default value and derivate path view
- 01:22 PM Revision d459b739 (cdm-dataportal): ref 10459: add settings and filter to specimen page
- 12:44 PM Revision 29a26aca (cdmlib): ref #10400, ref #10459 adapt binder
- 11:18 AM Revision d912db3c (taxeditor): ref #8930: enlarge the no entry icon
- 10:55 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- There were still an issue that the classification of the selected node was imported, this is fixed now, but there are...
- 10:18 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- The export has no test yet, so it could be that it is an export issue. I am currently writing the tests.
- 10:08 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Are you exporting the correct subtree? I tried to export rem-conf-am/"Mein test" which has only 1 child but get
~... - 09:56 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- And the description should be "Export the content of the currently selected database into WFO classification format."...
- 09:54 AM feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
- Andreas Müller wrote in #note-9:
> Can you rename it from WFO DwC-A export to WFO classification export in menu and ... - 08:07 AM feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
- This is implemented. If a classification is selected, it is not possible to click "Finish" and a warning appears in t...
- 10:43 AM Revision 063d8979 (taxeditor): ref #10448: fix configuration creation in WFO classification export
- 10:37 AM feature request #8930: Publishable objects should show icon if they are unpublished
- Andreas Müller wrote in #note-40:
> By the way the strange clicking behaviour also appears in the facts view.
>
>... - 09:51 AM feature request #8930: Publishable objects should show icon if they are unpublished
- In navigator it looks fine now with the text based symbol.
Only a minor issue: if there are taxon node status symb... - 09:46 AM feature request #8930: Publishable objects should show icon if they are unpublished
- By the way the strange clicking behaviour also appears in the facts view.
But: it only appears when showing the cu... - 09:34 AM feature request #8930 (Feedback): Publishable objects should show icon if they are unpublished
- 09:32 AM feature request #8930: Publishable objects should show icon if they are unpublished
- Katja Luther wrote in #note-36:
> Andreas Müller wrote in #note-34:
>
> >
> > I guess this was the reason why w... - 08:25 AM feature request #8930 (Resolved): Publishable objects should show icon if they are unpublished
- 10:06 AM Revision cfa51ccc (taxeditor): ref #8930: unpublished icon always first
- 10:03 AM Revision 2b4316b2 (taxeditor): ref #10448: WFO -> WFO classification
- 09:35 AM Revision aef815d9 (taxeditor): ref #8930: come back to unicode in navigator
- 09:25 AM bug #10440 (Resolved): Still some problems with metadata of images in portal
- 09:20 AM bug #10440: Still some problems with metadata of images in portal
- I just checked it again and only cichorieae and cyprus have this preference set, maybe then we can do it manually.
- 09:18 AM bug #10225 (Resolved): MultipleRepresentationException when moving synonym in homotypic group
- I played around a lot with moving synonyms, editing them and setting it as basionym without saving between and could ...
- 09:13 AM feature request #10400 (Resolved): Make taxon-specimen relation for taxon pages configurable in webservice
- Reopen only to handle the open issues in new tickets.
- 09:07 AM feature request #10400 (Closed): Make taxon-specimen relation for taxon pages configurable in webservice
- I had a look on the code and the test and it looks good, so I think we can close the ticket
- 08:40 AM feature request #10436 (Resolved): Make state modifiers invisible if no recommended term collection is selected
- This should be fixed.
- 08:40 AM Revision 94a1be06 (taxeditor): ref #10436: Use NUllSafe Method to check for empty recommended modifier
- 08:24 AM Revision 21eca310 (taxeditor): ref #8930: use red not entry icon for not published descriptions
- 08:08 AM feature request #7443 (Closed): Implement in-authors in name parser and formatter for zoological and fungi names
- Ok, then we can close the ticket.
01/25/2024
- 11:06 PM Revision f9677565 (cdmlib): fix #10451 try to fix test for optional fullname
- 08:05 PM feature request #10451 (Resolved): Allow adding fullName (name+author) to coldp name table
- Applied in changeset commit:cdmlib|ab81c75c0364a279b01962395bb51bda86642d17.
- 08:05 PM Revision ab81c75c (cdmlib): fix #10451 handle optional fullname in ColDpExport
- 07:54 PM feature request #10433 (Closed): Add Index Fungorum name identifier type
- Andreas Müller wrote in #note-3:
> We could still try to implement the URL pattern during term loading (https://www.... - 07:15 PM Revision 832ef926 (cdmlib): cleanup
- 07:15 PM Revision 85397ec2 (cdmlib): ref #10433 add index fungorum urlPattern during term loading
- 05:57 PM bug #10463 (Resolved): Disallow changing DB when switching user in TaxEditor
- Works now and can be closed (I only keep it open in case we want to do code cleaning now, so not to forget it).
- 02:46 PM bug #10463 (In Progress): Disallow changing DB when switching user in TaxEditor
- Unfortunately the committed solution did not work.
- 02:24 PM bug #10463 (Resolved): Disallow changing DB when switching user in TaxEditor
- Applied in changeset commit:taxeditor|8aea1eddf641c106268ac83470e35ca780b646ad.
- 02:17 PM bug #10463 (Closed): Disallow changing DB when switching user in TaxEditor
- As switching the database without closing the TaxEditor currently creates serious problems it should not be possible ...
- 05:47 PM feature request #8930: Publishable objects should show icon if they are unpublished
- Andreas Müller wrote in #note-34:
>
> I guess this was the reason why we originally did not use images in the na... - 02:10 PM feature request #8930 (Feedback): Publishable objects should show icon if they are unpublished
- Katja Luther wrote in #note-32:
> I was wrong, it is possible to add an image also in navigator, so now I added the ... - 09:52 AM feature request #8930: Publishable objects should show icon if they are unpublished
- Andreas Müller wrote in #note-31:
> I just realize that probably the "ban" icon is even more adequate: https://fonta... - 09:51 AM feature request #8930 (Resolved): Publishable objects should show icon if they are unpublished
- I was wrong, it is possible to add an image also in navigator, so now I added the same image in the navigator and in ...
- 09:43 AM feature request #8930: Publishable objects should show icon if they are unpublished
- I just realize that probably the "ban" icon is even more adequate: https://fontawesome.com/icons/ban?f=classic&s=soli...
- 05:28 PM Revision 3804d576 (taxeditor): ref #10463: adapt login dialog to disallow user change to another db
- 05:26 PM feature request #10334 (Closed): Evaluate DescriptionBase.publish in webservices
- Everything works in ColDP and in CDMlight.
- 03:54 PM bug #10430 (Closed): Problems found in log files of restricted users (distribution-editor)
- 01:02 PM bug #10430 (Resolved): Problems found in log files of restricted users (distribution-editor)
- All NPEs shouldn't be thrown anymore. Please review.
- 12:56 PM bug #10430 (In Progress): Problems found in log files of restricted users (distribution-editor)
- 03:41 PM Revision 40892412 (taxeditor): cleanup
- 03:41 PM Revision ba71ef36 (taxeditor): revert set to private
- 03:26 PM Revision 6c560dcb (taxeditor): ref #10463 again try to fix disabling database select
- 03:25 PM Revision e14ce51d (taxeditor): set to private
- 02:54 PM Revision 88e64ca9 (taxeditor): ref #10463 try to fix login disabling in another way
- 02:36 PM bug #10461 (Closed): Duplicate user name not handled correctly during registration
- 02:27 PM bug #10461: Duplicate user name not handled correctly during registration
- Review:
One of our student tested as follows (test Vaadin):
1st registration: private mail & User name -> registr... - 02:24 PM Revision 8aea1edd (taxeditor): fix #10463 disallow changing DB when switching user
- 02:12 PM Revision 009dc946 (taxeditor): cleanup
- 01:58 PM feature request #7443 (Resolved): Implement in-authors in name parser and formatter for zoological and fungi names
- Yes, of course it does not work without adding years as zoological names require years for correct parsing.
- 10:53 AM feature request #7443: Implement in-authors in name parser and formatter for zoological and fungi names
- Adding the name mentioned above for a new fungi name works as expected, but for zoological names it does not work
... - 01:56 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- We also should clean up the Pinnularia spinnifera Potapova & al. records that you created for testing. I guess they s...
- 01:54 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- I finally implemented it the way you requested first. By unlocking the published registration it is now also possible...
- 01:49 PM feature request #10435 (Resolved): Vaadin, add type after published registration of a scientific name
- Applied in changeset commit:cdm-vaadin|0831cb3b2f7a819e1c861c4f6d095655468e5e84.
- 09:33 AM feature request #10435: Vaadin, add type after published registration of a scientific name
- Now I understand why the behavior was different on test and production. Actually it wasn't but the name I was using o...
- 01:49 PM Revision 0831cb3b (cdm-vaadin): fix #10435 allow adding a type by curator after publishing a registration
- 01:48 PM Revision c990fc95 (cdm-vaadin): cleanup
- 01:01 PM Revision be9497ec (taxeditor): ref #10430: avoid NPE in password wizard
- 12:53 PM Revision 42e181b4 (taxeditor): ref #10430: avoid NPEs
- 12:05 PM Revision 7c086785 (cdm-dataportal): ref #10453: do not show images without representations
- 11:52 AM bug #10453: Missing uri in mediaRepresentation yields to completely missing media
- Katja Luther wrote in #note-7:
> This seems to be fixed:
>
> The image is shown, but with a warning icon:
Is i... - 11:48 AM bug #10453 (Closed): Missing uri in mediaRepresentation yields to completely missing media
- This seems to be fixed:
The image is shown, but with a warning icon:
 - 11:30 AM Revision 84a3f80b (taxeditor): ref #10448: show warning if WFO export is called on classification
- 10:41 AM Revision a4aadec8 (taxeditor): ref #8930: ban icon added
- 09:49 AM Revision 07b4766c (taxeditor): ref #8930: icon for not published in navigator and factual data view
- 09:38 AM Revision 2fde5de7 (cdm-vaadin): cleanup
01/24/2024
- 10:45 PM Revision 24e53a2f (cdm-vaadin): correct method name
- 10:31 PM bug #10461 (Resolved): Duplicate user name not handled correctly during registration
- Should be fixed. Please review. Now it does not show an error dialog but simply a warning and directly entering anoth...
- 11:37 AM bug #10461: Duplicate user name not handled correctly during registration
- WHK:
yes, it was a new self registration in the test-Vaadin system coming from phycobank-test registration with a ... - 11:17 AM bug #10461 (Closed): Duplicate user name not handled correctly during registration
- ~~~
java.util.concurrent.ExecutionException: eu.etaxonomy.cdm.api.service.security.AccountSelfManagementException: T... - 10:24 PM Revision ac0e01ef (cdm-vaadin): Change account creation messages.
- 10:14 PM feature request #8930: Publishable objects should show icon if they are unpublished
- Andreas Müller wrote in #note-28:
> In the factual data it is nice that it shows color. The disadvantage seems to be... - 03:44 PM feature request #8930 (Feedback): Publishable objects should show icon if they are unpublished
- What is the reason that the facts view allows color symbols while the navigator does only allow text based symbols?
- 03:43 PM feature request #8930: Publishable objects should show icon if they are unpublished
- In the factual data it is nice that it shows color. The disadvantage seems to be that there is always a larger space ...
- 03:37 PM feature request #8930: Publishable objects should show icon if they are unpublished
- Functionality works.
However, this circle is very thin so especially in the navigator it is difficult to recognize... - 03:16 PM feature request #8930 (Resolved): Publishable objects should show icon if they are unpublished
- 03:16 PM feature request #8930: Publishable objects should show icon if they are unpublished
- So I used the (red) circle as symbol, please review.
- 12:03 PM feature request #8930: Publishable objects should show icon if they are unpublished
- Katja Luther wrote in #note-21:
> What do you think about this:
>
> in taxon navigator
>
> 
and this in factual data v... - 11:12 AM feature request #8930 (In Progress): Publishable objects should show icon if they are unpublished
- 11:11 AM feature request #8930: Publishable objects should show icon if they are unpublished
- It works with the unicode symbol, but without colours:
 - 07:23 PM Revision 8467700f (cdm-vaadin): cleanup
- 07:22 PM Revision d4b024eb (cdm-vaadin): ref #10461 try fix duplicate username handling (cont. II)
- 07:04 PM feature request #10435 (In Progress): Vaadin, add type after published registration of a scientific name
- OK, so this is different on production. On test and on local the "existing name" button is not disabled when an exist...
- 06:16 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- In the production system it works as befürchtet:
Pinnularia spinifera was registered as name as http://phycobank.o... - 05:34 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- I jus
Andreas Müller wrote in #note-3:
> Wolf-Henning Kusber wrote in #note-2:
>
> The other option would look ... - 04:02 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- Handled in RegistrationWorkingSetBean.createRegistrationsList()/existingNameCombobox.addValueChangeListener()
- 10:03 AM feature request #10435: Vaadin, add type after published registration of a scientific name
- No exact answer to your question but...
my solution for Vaardin would be:
When a name from the current (open) Wor... - 12:25 AM feature request #10435: Vaadin, add type after published registration of a scientific name
- Wolf-Henning Kusber wrote in #note-6:
> It is not exactly the same because I do not want to duplicate the name, I wa... - 06:20 PM Revision 6b8f2ba1 (cdm-vaadin): ref #10461 try fix duplicate username handling (cont.)
- 06:17 PM Revision 951303fc (cdm-vaadin): ref #10461 try fix duplicate username handling
- 06:16 PM Revision 7223f990 (cdm-vaadin): cleanup
- 04:22 PM bug #6508 (Worksforme): Rule: All TypeDesignations of a Registration must share the same citation and citationMicroreference
- 03:55 PM bug #6508: Rule: All TypeDesignations of a Registration must share the same citation and citationMicroreference
- I think this is not a bug, but a feature request that is not needed. Please set the status to 'closed' or 'works for ...
- 12:07 PM bug #6508 (Feedback): Rule: All TypeDesignations of a Registration must share the same citation and citationMicroreference
- Can you leave some more information what is meant here? What is the requirement: should this be handled automatically...
- 02:56 PM feature request #10400: Make taxon-specimen relation for taxon pages configurable in webservice
- I additionally implemented CurrentDetermination ("CDET") as a parameter.
- 02:55 PM Revision 75a0fec6 (cdmlib): ref #10400 implemented current/preferred determination as additional assoziation type
- 01:34 PM Revision 6a3ff78c (taxeditor): ref #8930: add icon if taxon or description is not published
- 11:56 AM feature request #10462 (New): Allow adding ORCID for authors in Phycobank
- ... here: not for users but ordinary Person records.
Uses are handled at: #9106 - 11:41 AM task #10268 (In Progress): Selecting an existing name as basionym
- 11:32 AM feature request #6732 (Closed): Rank selector offering 2 filtered lists of ranks (default, all) for phycobank
- This works as expected and can therefore be closed.
- 11:15 AM feature request #6732: Rank selector offering 2 filtered lists of ranks (default, all) for phycobank
- yes please remove,
rank selection is perfectly woriking #6732 can be closed - 11:11 AM feature request #6732: Rank selector offering 2 filtered lists of ranks (default, all) for phycobank
- Also I do not understand why this is a subtask for "Remaining registation UI tasks" (#8515). Should we remove it from...
- 11:10 AM feature request #6732 (Feedback): Rank selector offering 2 filtered lists of ranks (default, all) for phycobank
- Is this still an open issue? I think I saw this working already.
- 11:02 AM feature request #7014 (Duplicate): Support for ORCID person ids in phycobank
- This is a duplicate for #9508
- 10:56 AM Revision 4ea1ee0e (cdmlib): ref #10453 remove deprecated method in MediaUriTransformationProcessor
- 10:55 AM feature request #6170: Selfregistration widget
- Organisation: not done because of user feedbacks, for people that are unemployed scientists (e.g. after finishing the...
- 10:50 AM feature request #6170: Selfregistration widget
- For registration some data is required:
Username: done
Password: done
Email: done
Organisation:... - 10:52 AM feature request #10460 (New): Selfregistration widget follow up
- Include as optional
Field "Organisation" - 10:47 AM bug #10453 (Resolved): Missing uri in mediaRepresentation yields to completely missing media
- Probably resolved, but still needs testing.
- 10:29 AM bug #10453 (In Progress): Missing uri in mediaRepresentation yields to completely missing media
- 10:45 AM Revision 28794ab9 (cdmlib): ref #10453 add additional null check for missing uri
- 10:16 AM feature request #9508: OpenID Connect 1.0 authentication with ORCID
- This was an idea discussed with Andreas K. A good idea, but we postponed it.
Currently, I see in Vaadin just the fie... - 10:07 AM bug #10434 (Closed): Dropdown menue for genus and higher ranks truncated
- 09:35 AM bug #10434: Dropdown menue for genus and higher ranks truncated
- Implemented and working as expected. Thanks, this ticket can be closed.
- 10:05 AM Revision 059a6a8a (taxeditor): ref #10448: set family string in configurator
- 10:02 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Andreas Müller wrote in #note-14:
> Katja Luther wrote in #note-13:
> > Should it be possible to export more than one... - 09:13 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Katja Luther wrote in #note-13:
> Should it be possible to export more than one subtree? Then we have to think about... - 08:59 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Should it be possible to export more than one subtree? Then we have to think about how to handle the family name if t...
- 12:03 AM feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
- 12:03 AM feature request #10448: Implement WFO Backbone export in TaxEditor
- Can you allow editing the field familyStr (as "family") - as a required field if the chosen taxon is not of rank fami...
- 09:53 AM Revision 297419d9 (taxeditor): ref #10448: remove DwC-A and adapt export wizard
- 08:24 AM Revision a4922057 (taxeditor): ref #10448 fix factual data handling in WfoExport in TaxEditor
- 08:23 AM Revision 05937846 (taxeditor): cleanup
- 12:34 AM feature request #10334: Evaluate DescriptionBase.publish in webservices
- do final check if the unpublished factual data are really removed.
- 12:32 AM feature request #10449 (Closed): Allow filtering out synonyms in list exports
- For now we close this.
- 12:29 AM feature request #7443: Implement in-authors in name parser and formatter for zoological and fungi names
- Katja Luther wrote in #note-11:
> Could you give me an example?
In rem-conf-am there in Testklass there is a taxo...
01/23/2024
- 11:40 PM feature request #10448: Implement WFO Backbone export in TaxEditor
- The export allows selecting the whole classification:
but it does not all... - 11:37 PM feature request #10448: Implement WFO Backbone export in TaxEditor
- Can you rename it from WFO DwC-A export to WFO classification export in menu and titles/others?
- 11:32 PM feature request #10448: Implement WFO Backbone export in TaxEditor
- Toggling the "Include Factual Data" checkbox throws
~~~
last remote service : https://test.e-taxonomy.eu:443/cdms... - 01:24 PM feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
- Now the export is available in main menu and in navigator menu. Please review.
- 11:33 PM Revision 33e91397 (cdmlib): ref #10448, #10446 remove doFactualData from WfoExportConfigurator
- 11:20 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- Please review.
For type designations defined in the same working set as the name all status should be shown except... - 11:11 PM bug #10434 (Resolved): Dropdown menue for genus and higher ranks truncated
- Applied in changeset commit:cdm-vaadin|da2fe871114de0201a7f327c978a53ccbcf3fcf2.
- 08:01 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- Hope, I understand the question:
status types should be shown if the are *not* in the same working set:
lectotype... - 07:34 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- Wolf-Henning Kusber wrote in #note-7:
> The type of a new name is fine, but...
> I am talking about a "name type" of ... - 07:21 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- The type of a new name is fine, but...
I am talking about a "name type" of a genus or a higher rank (family, order e... - 07:13 PM bug #10434 (Feedback): Dropdown menue for genus and higher ranks truncated
- Wolf-Henning Kusber wrote in #note-5:
> Can you please leave a message which one is the correct behaviour?
> Answer: ... - 06:49 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- Can you please leave a message which one is the correct behaviour?
Answer: not possible, see example 1 and 2 were I ... - 06:14 PM bug #10434 (In Progress): Dropdown menue for genus and higher ranks truncated
- The list differs depending on the question if the name has been published in the same publication or in another one.
... - 05:05 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- Filled in NameTypeDesignationPresenter.handleViewEntered()
Also NameTypeDesignationPresenter.provideTypeStatusTermIt... - 04:15 PM bug #10434: Dropdown menue for genus and higher ranks truncated
- How to:
* (on phycobank-test)Open publication/working set Kusber, W.-H.: NeueGattung mit oder ohne Typus. – Zeitschr... - 11:10 PM Revision da2fe871 (cdm-vaadin): fix #10434 swap actWithOnlyTypeDesignation handling, add not applicable and remove tautonomy
- 11:08 PM Revision 20ccb4e8 (cdm-vaadin): cleanup
- 11:02 PM Revision 6856051f (cdmlib): cleanup
- 09:57 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- It is not exactly the same because I do not want to duplicate the name, I want to use the published name and link its...
- 09:54 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- Wolf-Henning Kusber wrote in #note-4:
> I have another idea: If it was allowed to choose "existing name" also for th... - 07:45 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- The problem is: If a scientist publish a new e.g. species name, he/she normally publish a holotype at the same time.
... - 07:29 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- Wolf-Henning Kusber wrote in #note-2:
> Let me explain what the problem is (this is a feature request for the curato... - 07:14 PM feature request #10435: Vaadin, add type after published registration of a scientific name
- Let me explain what the problem is (this is a feature request for the curator only):
Given the genus named "NeueGa... - 06:58 PM feature request #10435 (Feedback): Vaadin, add type after published registration of a scientific name
- But isn't this wanted behaviour? If you allow adding a type to the already published nomenclatural act you may get in...
- 06:31 PM bug #10373 (Closed): Submitter rights for watching respectively editing working sets
- 06:30 PM bug #10373: Submitter rights for watching respectively editing working sets
- Submitters see only published Workingsets. (as expected)
Exception: Kulikovskiy, M., …Lake Baikal: Hotspot …in Taxon... - 03:31 PM bug #10373 (Resolved): Submitter rights for watching respectively editing working sets
- Applied in changeset commit:cdm-vaadin|4ec40c58490aa3b5b8c35114ec8b6a472fff6e83.
- 12:39 PM bug #10373: Submitter rights for watching respectively editing working sets
- The bean in which this happens is the StartRegistrationViewBean. The loading and definition of filter takes places in...
- 10:46 AM bug #10373: Submitter rights for watching respectively editing working sets
- WHK: (2023-12-01)
Dazu gibt es ein Ticket mit jetzt 3 Varianten zur Lösung:
Submitter (Du nennst sie Committer) s... - 10:28 AM bug #10373 (In Progress): Submitter rights for watching respectively editing working sets
- 10:27 AM bug #10373: Submitter rights for watching respectively editing working sets
- A reference that can be used for testing is: Alles, E., Nörpel-Schempp, M. & Lange-Bertalot, H.: Zur Systematik und Ö...
- 06:30 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Katja Luther wrote in #note-26:
> Andreas Müller wrote in #note-23:
> > For some reason the maps are not shown if o... - 04:13 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-23:
> For some reason the maps are not shown if one removes any of the terms in use fro... - 06:26 PM bug #10440: Still some problems with metadata of images in portal
- Katja Luther wrote in #note-32:
> We need an update script for the databases having this preference set already.
... - 03:28 PM bug #10440: Still some problems with metadata of images in portal
- We need an update script for the databases having this preference set already.
- 03:21 PM bug #10440: Still some problems with metadata of images in portal
- Andreas Müller wrote in #note-19:
> In the database "allow override" is saved as true but there is no possibility to... - 02:15 PM bug #10440: Still some problems with metadata of images in portal
- Andreas Müller wrote in #note-18:
> The Restore Defaults does not seem to work.
>
> By the way what are the defau... - 02:07 PM bug #10440: Still some problems with metadata of images in portal
- Andreas Müller wrote in #note-14:
> The "New" and the "Remove" button should be beside each other and have the same ... - 01:54 PM bug #10440: Still some problems with metadata of images in portal
- Andreas Müller wrote in #note-13:
> The "Create metadata entry" best should have the possibility to enter all 3 data... - 01:51 PM bug #10440: Still some problems with metadata of images in portal
- Andreas Müller wrote in #note-11:
> Adding a new row moves the buttons out of the visible area:
>
> : Still some problems with metadata of images in portal
- Now there are 4 preference values: "only CDM", "only Media Server", "prefer CDM" and "prefer Media Server" and the me...
- 06:25 PM feature request #10449 (Resolved): Allow filtering out synonyms in list exports
- 01:31 PM feature request #10449 (Feedback): Allow filtering out synonyms in list exports
- 01:19 PM feature request #10449: Allow filtering out synonyms in list exports
- This works, tested for cdmLight, ColDp and DwC-A, Wfo does not have the possibility to configure it.
- 06:00 PM Revision 55b097b8 (cdmlib): fix referencing objects formatter test
- 05:42 PM Revision 8eda31c6 (cdmlib): ref #10434 add referencing objects formatter for Registrations
- 03:31 PM Revision 4ec40c58 (cdm-vaadin): fix #10373 additionally add a dialog to the RegistrationWorkingsetPresenter which handles permission issues nicely.
- 03:29 PM Revision a35d07fb (cdm-vaadin): ref #10373 remove all datePublished is null or-restriction and do some refactoring, also directly access count methods
- 03:27 PM Revision 1fe9d55a (cdm-vaadin): cleanup
- 03:19 PM Revision ac308cbd (cdmlib): cleanup
- 02:59 PM bug #10292 (Duplicate): Filter Metadata from Cdm Instance and from MediaServer
- This is a duplicate for #10440, so we can close this ticket
- 02:14 PM Revision c8ff053d (taxeditor): ref #10440: sort meta data
- 02:07 PM Revision dbe99c90 (taxeditor): ref #10440: buttons with icons and in a row
- 01:53 PM Revision 1eeed66c (taxeditor): ref #10440: new meta data entries should have display name
- 01:50 PM Revision 6035b0b2 (taxeditor): ref #10440: minor issues in meta data preference page
- 01:38 PM Revision 4374d9a2 (taxeditor): ref #10448: adapt writing of DwC-A export files
- 01:29 PM feature request #7443 (Feedback): Implement in-authors in name parser and formatter for zoological and fungi names
- Could you give me an example?
- 01:25 PM feature request #10334 (Resolved): Evaluate DescriptionBase.publish in webservices
- The checkboxes are available for ColDP and cdmLight
- 12:12 PM Revision d46cd0bd (taxeditor): ref #10448: adapt export wizards
- 12:05 PM Revision 7fd6fbd4 (taxeditor): Revert "ref #10448: adapt wizard for wfo classification export - continue"
- This reverts commit 635b9837981456ec4ea7f2010fe1dcd84092141a.
- 10:59 AM Revision 635b9837 (taxeditor): ref #10448: adapt wizard for wfo classification export - continue
- 10:58 AM Revision a382f45a (taxeditor): ref #10448: adapt wizard for wfo classification export
- 10:11 AM feature request #10127 (Closed): Add full reference information to sec. references in dataportal
- works as expected now
- 09:12 AM Revision 6d207c79 (cdmlib): log errors
01/22/2024
- 05:58 PM bug #10111: Data loss e.g. when entering type information
- Orphaned Specimen:
~~~ sql
SELECT sob.DTYPE, sob.id, sob.titleCache, sob.accessionnumber, sob.protectedtitlecache... - 04:27 PM bug #10111: Data loss e.g. when entering type information
- wGB:
Caryophyllales Datenbank, Alternanthera scirpoides Hook.f., Gen. Pl. 3: 39. 1880
Es gab einen textuellen Typus... - 04:06 PM Revision 9abcf357 (taxeditor): ref #10440: improve meta data preference page
- 02:28 PM Revision 85c2e280 (taxeditor): ref #10440: read pref from json
- 02:24 PM Revision c382700b (cdmlib): ref #10441: some more property path adaptions
- 02:22 PM feature request #10127 (Resolved): Add full reference information to sec. references in dataportal
- Andreas Müller wrote in #note-23:
>
> There is still a space that shouldn't be there before the commata:
>
> ... - 02:13 PM Revision 1d0387e8 (cdmlib): ref #10440: differ between only cdm/server and perfer cdm/server
- 02:11 PM Revision 77a91b9d (cdm-dataportal): ref #10440: differ between only cdm/server and prefer cdm/server
01/21/2024
- 01:35 PM Revision a60344a7 (taxeditor): fix non-compiling SearchManager (cont.)
- 01:35 PM Revision b3967f74 (taxeditor): cleanup
- 01:17 PM Revision aa0e988e (taxeditor): fix non-compiling SearchManager
- 12:54 AM Revision eb4dc829 (cdmlib): ref #10400 fix FindOccurrencesConfigurator default filter value
01/20/2024
- 11:42 PM Revision 50c380b7 (cdmlib): ref #10400 use TaxonOccurrenceRelationType param in webservices
- 11:41 PM Revision 35296db5 (cdmlib): cleanup
- 07:04 PM bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
- TaxonNodeDto params:
easy to load:
* secUuid
* taxonUuid
* (taxon node) status
* taxonStatus = TaxonStatus.Accepted... - 06:43 PM feature request #10400 (Resolved): Make taxon-specimen relation for taxon pages configurable in webservice
- This is implemented by a major refactoring. Many method finally call OccurrenceDaoHibernateImpl.listByAssociatedTaxon...
- 06:30 PM feature request #10459 (Closed): Add taxon-specimen association filter for taxon pages
- The webservices have been adapted in #10400. The filter parameter still needs to be implemented in dataportal.
Dis... - 03:52 PM Revision 5f4dcf70 (cdmlib): ref #10400 minor javadoc
- 03:52 PM Revision db2c6c41 (taxeditor): ref #10400 fix test and adapt to moved TaxonOccurrenceRelationType
- 03:38 PM Revision e8c4d01c (cdmlib): ref #10400 move TaxonOccurrenceRelationType to api
- 03:20 PM Revision 2dc5ac81 (cdmlib): ref #10400 refactor occurrenceDao for findByAssociatedTaxon and add association type configuration param (cont.)
- 11:57 AM Revision 22328801 (cdmlib): ref #10400 fix TypedQuery issue in TaxonNameDaoHibernateImpl.getTypeDesignationQuery()
- 01:36 AM Revision 241583f9 (cdmlib): ref #10400 refactor occurrenceDao for findByAssociatedTaxon and add association type configuration param
01/19/2024
- 07:42 PM feature request #7413 (Closed): Make in-Authors editable in TaxEditor for zoological and fungi names
- works as expected now
- 11:58 AM feature request #7413 (Resolved): Make in-Authors editable in TaxEditor for zoological and fungi names
- Andreas Müller wrote in #note-28:
> Andreas Müller wrote in #note-22:
> > The basionym in-author is still not saved... - 04:02 PM feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
- The export is not yet available in the menu:
- 03:52 PM bug #10457: Print version of portal site sometimes shows links as text
- oder https://addons.mozilla.org/de/firefox/addon/fireshot/
- 03:51 PM bug #10457: Print version of portal site sometimes shows links as text
- WGB:
dies gilt das auch für Opera, im Gegensatz zu dem, was ich vorher sagte (eFloraMex). Bei Opera gibt’s aber ei... - 03:26 PM bug #10457: Print version of portal site sometimes shows links as text
- KL:
Das scheint drupal Funktionalität zu sein, es wird mit folgendem Code zugefügt:
~~~ php
drupal_add_js('jQu... - 01:12 PM bug #10457 (New): Print version of portal site sometimes shows links as text
- observed in Firefox:
WGB:
Außerdem zeigte er einen Browser-Ausdruck für ein einzelnes Taxon, gemacht mit Firefo... - 03:20 PM feature request #8930: Publishable objects should show icon if they are unpublished
- Maybe this is a no-brainer and it fits to the current milestone (#10334)
- 03:16 PM feature request #8138 (Closed): [DISCUSS] Publish flag for facts and type designations
- The type designation discussion has been moved to #10458.
Factual data filter is implemented in #10206. - 03:13 PM discussion #10458 (New): [DISCUSS] Publish flag for type designations
- In #7653#note-5 there was the wish for an individual publish flag on type desginations (especially for text based typ...
- 03:05 PM feature request #10334: Evaluate DescriptionBase.publish in webservices
- I also added a filter for unpublished facts to CDMlight and ColDP export.
@Katja, could you please add the accord... - 03:04 PM feature request #10334: Evaluate DescriptionBase.publish in webservices
- The specimens also work now.
I also cleanup the services and dao code a lot, removed multiple methods and tried t... - 03:00 PM Revision 2d2af82f (cdmlib): cleanup
- 03:00 PM Revision 6b19f270 (cdmlib): ref #10206 add publish flag to CdmLight and ColDP export in cdmlib
- 02:29 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-23:
> For some reason the maps are not shown if one removes any of the terms in use fr... - 02:03 PM feature request #10330 (Feedback): Handle term tree distribution status for distributionInfo in dataportal
- For some reason the maps are not shown if one removes any of the terms in use from the "Distribution status filter tr...
- 01:40 PM feature request #10330 (Closed): Handle term tree distribution status for distributionInfo in dataportal
- Works as expected, now.
- 01:39 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Katja Luther wrote in #note-10:
> Andreas Müller wrote in #note-8:
> > Please remove " (including hierarchical orde... - 12:26 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
>
> This is implemented also on server side, now. So could you please add the parameter statusTree to this webser...- 02:04 PM bug #10440: Still some problems with metadata of images in portal
- The preference value is json now.
- 12:40 PM bug #10440: Still some problems with metadata of images in portal
- Andreas Müller wrote in #note-22:
> Katja Luther wrote in #note-6:
> > If the source is set to mediaServer but no m... - 02:03 PM Revision 3bb13bd2 (cdmlib): ref #10440: save meta data preference as json
- 01:38 PM Revision 780eb27d (cdm-dataportal): ref #10330 revert description on area tree
- 01:30 PM Revision d5ab13e6 (cdm-dataportal): ref #10330 adapt info text for status tree
- 01:16 PM Revision 6eb823bf (cdm-dataportal): remove outdated distributionmap method link
- 12:20 PM Revision 10bc2ade (cdm-dataportal): ref #10127: remove space between ref and comma
- 11:24 AM Revision 63a43144 (cdm-dataportal): ref #10456: don't get elements for specimen table - continue
- 11:05 AM bug #10456 (In Progress): Specimen Table view does not show all typedesignations
- This is at least in progress. Please set to resolved if fully fixed already.
- 09:41 AM bug #10456 (Closed): Specimen Table view does not show all typedesignations
- The specimen table view does not show all typedesignations but only the typedesignations of the accepted taxon homoty...
- 10:10 AM Revision a12b1e26 (cdm-dataportal): ref #10456: do not get full elements for specimen table before getting dtos
- 09:43 AM Revision 1127a953 (cdmlib): ref #10456: order of occurrences
01/18/2024
- 11:05 PM Revision 3d94bd2a (taxeditor): ref #10334 fix test in TaxEditor (cont.)
- 10:49 PM Revision 91252243 (taxeditor): ref #10334 fix test in TaxEditor
- 10:19 PM Revision d41da5c3 (cdmlib): ref #10441: some more propertypath adaptions
- 08:40 PM Revision 99d68d67 (cdmlib): fix portal test
- 08:10 PM Revision c3c1b711 (cdmlib): ref #10334 further handle include unpublished in webservices (cont.)
- 08:06 PM Revision 9e3e31c0 (cdmlib): ref #10334 further handle include unpublished in webservices
- 08:01 PM Revision e59035bc (cdm-dataportal): fix test
- 07:57 PM Revision d0501a22 (cdm-dataportal): fix test
- 07:16 PM Revision 856cb64a (cdm-dataportal): fix c&p error
- 07:07 PM Revision ff465593 (cdm-dataportal): fix tests
- 07:06 PM Revision 06b7dc0c (cdm-dataportal): fix tests
- 07:01 PM Revision c19e0bd5 (cdm-dataportal): doi needs to be not null
- 06:56 PM Revision 6224aba9 (cdm-vaadin): code formatting
- 06:53 PM Revision c1c60866 (cdm-vaadin): remove unused method
- 06:43 PM Revision aec35a28 (taxeditor): ref #10334 adapt TaxEditor map parameters to includeUnpublished param
- 06:41 PM Revision 3616bf76 (cdm-dataportal): fix not existing variable
- 06:38 PM Revision 2c027a97 (cdmlib): cleanup OccurrenceService
- 06:38 PM Revision b22461df (cdmlib): ref #10334 add getDistributionServiceRequestParameterString(taxonDescriptions, ...)
- 05:41 PM Revision 39897a26 (cdmlib): ref #10334 remove further unused methods
- 04:54 PM feature request #10240 (Closed): Improve DOI formatting for references
- I think we can close this for now. If there will be detail refinement requests they can be discussed and implemented ...
- 11:13 AM feature request #10240: Improve DOI formatting for references
- Now the doi is added with external link and if no separator is at the end of the reference a point is added. If an in...
- 04:45 PM feature request #10127: Add full reference information to sec. references in dataportal
- Katja Luther wrote in #note-18:
> Andreas Müller wrote in #note-14:
> > All footnotes end with a colon now:
> >
... - 03:29 PM Revision e459c67b (cdmlib): add typedesignations of synonyms to list of specimen dtos
- 03:01 PM Revision fe4b8fce (cdmlib): ref #10334 further cleanup
- 03:00 PM Revision dd2e93c1 (cdmlib): ref #10334 fix test
- 02:50 PM Revision 0bc826d6 (cdmlib): ref #10334 remove unused description related methods and add some more includePublished handling
- 02:45 PM Revision 616fe9f6 (cdm-dataportal): fix derivation table, to show specimen of associated taxa as well
- 11:42 AM Revision 2b139d09 (taxeditor): ref #7413: handle BasionymInAuthor correctly -continue
- 11:37 AM Revision 96b38605 (taxeditor): ref #7413: handle BasionymInAuthor correctly
- 11:30 AM feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
- The export is available in the TaxEditor now. It is the same as for the DwC-A Export. Please review.
- 11:26 AM Revision 9d63798f (taxeditor): ref #10448: add WFO DwC-A export to Editor
- 11:10 AM Revision 45a847e0 (cdm-dataportal): ref #10240: some formating issues
- 01:02 AM Revision 4adece10 (cdmlib): cleanup
- 01:02 AM Revision 67586f49 (cdmlib): ref #10334 evaluate descriptionBase.publish in webservices (cont. II)
- 12:28 AM feature request #10334 (Feedback): Evaluate DescriptionBase.publish in webservices
- It does not yet work for specimen in the specimen table view and also not for the specimen tree view.
- 12:23 AM feature request #10334 (Resolved): Evaluate DescriptionBase.publish in webservices
- Generally this works now for the old taxon pages, too. Before closing I still need to check if all service calls hand...
01/17/2024
- 11:18 PM Revision 4e335a9e (cdm-vaadin): ref #10334 adapt vaadin to DescriptionBase.publish
- 11:17 PM Revision 922a2cec (cdm-vaadin): cleanup
- 10:55 PM Revision 2bbdf8fb (cdmlib): ref #10334 evaluate descriptionBase.publish in webservices (cont.)
- 10:39 PM Revision 11fd5383 (cdmlib): cleanup
- 10:36 PM Revision 590b1a23 (cdmlib): ref #10334 evaluate descriptionBase.publish in webservices
- 08:37 PM Revision a55ba33e (cdmlib-apps): adapt general DwcaExportActivator
- 08:35 PM Revision cbbe6b62 (cdmlib-apps): Add CichorieaeDwcaExportActivator ref #2455
- 08:30 PM Revision 9182e448 (cdmlib-apps): minor
- 08:27 PM Revision 940c5404 (cdmlib-apps): update pom to 5.42
- 08:23 PM feature request #7443 (Resolved): Implement in-authors in name parser and formatter for zoological and fungi names
- Should be fixed. Please review.
Maybe formatting still needs to be checked as this time I only worked on parsing. - 08:20 PM Revision 9bb911e1 (cdmlib): ref #7443 add parser for fungi and zoological names with in-authors
- 05:53 PM Revision 400416b3 (cdmlib): cleanup
- 03:00 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Andreas Müller wrote in #note-22:
> The basionym in-author is still not saved or handled (you did not find the metho... - 03:00 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Andreas Müller wrote in #note-26:
> Katja Luther wrote in #note-25:
> > Andreas Müller wrote in #note-23:
> > > Ho... - 01:21 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Katja Luther wrote in #note-25:
> Andreas Müller wrote in #note-23:
> > How far is the preference used at all. To m... - 01:07 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Andreas Müller wrote in #note-23:
> How far is the preference used at all. To me it seems that it has no effect. If ... - 01:02 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Andreas Müller wrote in #note-22:
> The basionym in-author is still not saved or handled (you did not find the metho... - 12:36 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- How far is the preference used at all. To me it seems that it has no effect. If so we should remove it.
- 12:33 PM feature request #7413 (Feedback): Make in-Authors editable in TaxEditor for zoological and fungi names
- The basionym in-author is still not saved or handled (you did not find the method but it exists).
- 11:59 AM feature request #7413 (Resolved): Make in-Authors editable in TaxEditor for zoological and fungi names
- This should be fixed with the last commits. Please review.
- 02:11 PM Revision f91075bf (cdm-dataportal): ref #10330: add status tree to distribution call in non-dto page
- 01:48 PM Revision d117faa0 (cdm-dataportal): ref #10330: : remove order from description
- 01:44 PM feature request #10127: Add full reference information to sec. references in dataportal
- Now it looks correct for Abies alba:
 - 12:04 PM feature request #10127: Add full reference information to sec. references in dataportal
- I adapted the render template configuration of the test portal to the render template of the production portal and no...
- 01:42 PM bug #10455 (New): Improve DOI formatting for references in cdm-light
- for details see #10240
It needs to bediscussed if the DOI should go into the bibliographic reference formatter and... - 01:41 PM feature request #10240 (Resolved): Improve DOI formatting for references
- Andreas Müller wrote in #note-10:
> The given example is a bit misleading as it is not a typical reference with auth... - 01:37 PM Revision 364c68af (cdm-dataportal): ref #10127: : add . if no separator at the end
- 01:20 PM Revision 10cf7ce4 (cdmlib): ref #7413 fully move in-authors to INonViralName
- 01:03 PM Revision d554c0f8 (cdmlib): ref #7413: move in-author methods to INonViralName
- 12:46 PM feature request #9406 (Rejected): Open issue for Edaphobase rank web service
- Edaphobase is not developed further anymore. So we won't fix.
- 12:44 PM task #6753 (Rejected): Edaphobase data issues before import
- Edaphobase is not developed further anymore. So we won't fix.
- 12:43 PM task #6510 (Rejected): Import Rank labels in German and Latin
- Edaphobase is not developed further anymore. So we won't fix.
- 12:42 PM feature request #6509: Implement Representation csv import
- Originally this was a blocker for #6510
- 11:14 AM bug #10454 (In Progress): Original spelling should not be shown in taxon title
- This is fixed on cdmlib site. Please implement in dataportal.
- 10:38 AM bug #10454 (Closed): Original spelling should not be shown in taxon title
- On new taxon pages the original spelling is shown also in the taxon title but should be shown only in the synonymy.
... - 11:13 AM Revision 61df0ef1 (cdmlib): ref #10454, ref #7781 add separator for nameUsedInSource
- 11:10 AM Revision 048a1365 (cdmlib): ref #10453: catch/log the error if makeNewMediaRepresentationsFor fails
- 10:42 AM bug #7781: original spelling is missing for accepted taxon in taxon page
- This should be fixed automatically by using the new taxon pages. See #10454 and #10322.
- 01:00 AM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- After release we need to add the parameter to the E+M dataportal.
- 12:40 AM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Katja Luther wrote in #note-10:
> Andreas Müller wrote in #note-8:
> > Please remove " (including hierarchical orde... - 12:38 AM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-9:
> Tree is passed to the webservice but the result still shows areas for all status:... - 12:35 AM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-14:
> Andreas Müller wrote in #note-13:
> > Katja Luther wrote in #note-11:
> > > An... - 12:59 AM feature request #9500 (Resolved): Allow removing certain distribution status from distribution publication
- This is so far fixed for the dataportals as it is possible to have a statusTree parameter now which allows defining t...
- 12:54 AM Revision 2b07f648 (cdmlib): ref #9500 remove ignoreDistributionStatusUndefined from DistributionInfoConfiguration (cont.)
- 12:43 AM Revision e23c54b3 (cdmlib): ref #9500 remove ignoreDistributionStatusUndefined from DistributionInfoConfiguration
01/16/2024
- 11:27 PM Revision c37edef7 (cdmlib): ref #9500, ref #10330 fix status tree handling
- 11:27 PM Revision 954ee1f5 (cdmlib): cleanup
- 10:40 PM feature request #9500: Allow removing certain distribution status from distribution publication
- once the statusTree parameter works remove the ignoreDistributionStatusUndefined from DistributionInfoConfiguration
- 10:37 PM Revision 63721c50 (cdmlib): ref #9500, ref #10330 implement status tree handling in distribution info webservices
- 05:41 PM bug #10292: Filter Metadata from Cdm Instance and from MediaServer
- This is maybe a duplicate for #10440
- 05:39 PM bug #10440: Still some problems with metadata of images in portal
- How far is #10292 a duplicate for this ticket? If it is a full duplicate can you close it as duplicate?
- 05:37 PM bug #10440: Still some problems with metadata of images in portal
- Katja Luther wrote in #note-6:
> If the source is set to mediaServer but no meta data available from the media Serve... - 05:30 PM bug #10440: Still some problems with metadata of images in portal
- Can you offer a link to any website that uses the preferences for testing (best including a link to metadata services...
- 05:28 PM bug #10440: Still some problems with metadata of images in portal
- Currently the list is saved as a ;-separated list. Also the mapping is saved with "=>" as a separator with obligate(?...
- 05:23 PM bug #10440: Still some problems with metadata of images in portal
- In the database "allow override" is saved as true but there is no possibility to set this value. As long as the metad...
- 05:19 PM bug #10440: Still some problems with metadata of images in portal
- The Restore Defaults does not seem to work.
By the way what are the defaults. - 05:18 PM bug #10440: Still some problems with metadata of images in portal
- The infotext suggests that the preferences are only valid for the dataportal (and only for the universal viewer). If ...
- 04:57 PM bug #10440: Still some problems with metadata of images in portal
- The preference seems to be unsorted. This makes it difficult to find single keys.
- 04:52 PM bug #10440: Still some problems with metadata of images in portal
- The remove button does not work. Or better, it works but the table view is not updated.
- 04:51 PM bug #10440: Still some problems with metadata of images in portal
- The "New" and the "Remove" button should be beside each other and have the same (default) size for buttons. Current i...
- 04:47 PM bug #10440: Still some problems with metadata of images in portal
- The "Create metadata entry" best should have the possibility to enter all 3 data, "show", "Original labal" and "Displ...
- 04:44 PM bug #10440 (Feedback): Still some problems with metadata of images in portal
- 04:43 PM bug #10440 (Resolved): Still some problems with metadata of images in portal
- Adding a new row moves the buttons out of the visible area:
I guess the t... - 04:34 PM bug #10440 (Feedback): Still some problems with metadata of images in portal
- 04:34 PM bug #10440: Still some problems with metadata of images in portal
- Where exactly can I find the new dataportal preference? I couldn't find it.
- 05:04 PM Revision d6610785 (taxeditor): ref #10440 update media metadata preferences info text
- 04:32 PM Revision a851ae99 (taxeditor): ref #7413: add selection listener
- 04:24 PM Revision 2996ffb8 (cdm-dataportal): update documentation links
- 03:52 PM bug #10363: Find a solution for importing all shared preferences in a new eclipse installation
- Katja Luther wrote in #note-7:
> I tried it another time and I got an error again:
>
> : ref #7413: fix if no nameDetails conf exists - continue
- 03:45 PM bug #8591: Multiple representations problem on setting synonym as basionym
- I move this to the current milestone as at least a part was solved within current milestone according to last comment.
- 03:01 PM Revision d9d713f7 (taxeditor): ref #7413: fix if no nameDetails conf exists
- 02:49 PM bug #10453: Missing uri in mediaRepresentation yields to completely missing media
- ~~~
java.lang.NullPointerException
at eu.etaxonomy.cdm.api.service.media.MediaUriTransformationProcessor.buildPathQ... - 02:26 PM bug #10453: Missing uri in mediaRepresentation yields to completely missing media
- So if you can create the stacktrace by debugging can you add it to the ticket?
- 01:48 PM bug #10453: Missing uri in mediaRepresentation yields to completely missing media
- Andreas Müller wrote in #note-1:
> Is there a stacktrace or how can this be observed?
With debugging, currently t... - 01:39 PM bug #10453: Missing uri in mediaRepresentation yields to completely missing media
- Is there a stacktrace or how can this be observed?
- 11:56 AM bug #10453 (Closed): Missing uri in mediaRepresentation yields to completely missing media
- If accidentally an empty media is added to a description, the complete loading of media crashes.
This empty media sh... - 02:18 PM Revision e89509b5 (taxeditor): ref #7413: inAuthors only for fungus or zoological names - continue
- 01:47 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Katja Luther wrote in #note-17:
> If the preference is set then you have to reload the details view. The saving shou... - 01:30 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- Katja Luther wrote in #note-17:
> If the preference is set then you have to reload the details view. The saving shou... - 12:53 PM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- If the preference is set then you have to reload the details view. The saving should be fixed for InCombinationAuthor...
- 11:02 AM feature request #7413: Make in-Authors editable in TaxEditor for zoological and fungi names
- in-authors are shown independent of the preference and of the nom. code now. For now it should be shown only if nom. ...
- 10:55 AM feature request #7413 (Feedback): Make in-Authors editable in TaxEditor for zoological and fungi names
- in-Authors can be edited now, but are not saved to the DB.
- 01:37 PM feature request #10127: Add full reference information to sec. references in dataportal
- Can you check yourself what is not correct there? Maybe it is because sec. is handled as "Source" on top of the page?
- 12:30 PM feature request #10127: Add full reference information to sec. references in dataportal
- Andreas Müller wrote in #note-17:
> Andreas Müller wrote in #note-16:
> > We need to discuss the default values. I th... - 12:19 PM feature request #10127: Add full reference information to sec. references in dataportal
- Andreas Müller wrote in #note-14:
> All footnotes end with a colon now:
>
> ... - 12:07 PM feature request #10127: Add full reference information to sec. references in dataportal
- Andreas Müller wrote in #note-16:
> We need to discuss the default values. I think, if the sec. ref. is generally sh... - 11:39 AM feature request #10127: Add full reference information to sec. references in dataportal
- We need to discuss the default values. I think, if the sec. ref. is generally shown (switched on in preferences) the ...
- 11:36 AM feature request #10127: Add full reference information to sec. references in dataportal
- Example for internal link: https://test.e-taxonomy.eu/dataportal/preview/cichorieae/?q=cdm_dataportal/taxon/c4651898-...
- 11:35 AM feature request #10127: Add full reference information to sec. references in dataportal
- All footnotes end with a colon now:
Can you remove this? - 11:31 AM feature request #10127: Add full reference information to sec. references in dataportal
- Currently the reference is shown below each homotypic group. This makes it very restless:
: Add full reference information to sec. references in dataportal
- Please shorten the config title
* "Complete secundum referenence in footnote or as internal link." -> "Secundum re... - 11:06 AM feature request #10127: Add full reference information to sec. references in dataportal
- Please always provide a direct link. This makes it easier to review.
- 01:28 PM Revision 417a0aee (cdmlib): ref #7443, ref #10432 add formatting and partly parsing for name in-authors
- 01:02 PM Revision 820a6f59 (taxeditor): ref #7413: inAuthors should be shown only for fungus or zoological names
- 12:19 PM Revision 989b3299 (cdm-dataportal): ref #10127: : should be shown, only if microreference available
- 12:15 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-13:
> Katja Luther wrote in #note-11:
> > Andreas Müller wrote in #note-9:
> >> ...
... - 12:12 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Katja Luther wrote in #note-11:
> Andreas Müller wrote in #note-9:
>> ...
> This is a problem of the webservice, i... - 12:11 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- The status tree parameter does not seem to be available for old taxon pages:
... - 12:02 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-9:
> Tree is passed to the webservice but the result still shows areas for all status:... - 12:02 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Andreas Müller wrote in #note-8:
> Please remove " (including hierarchical order)" from the documentation. I don't t... - 12:00 PM feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
- Tree is passed to the webservice but the result still shows areas for all status:
: Handle term tree distribution status for distributionInfo in dataportal
- Please remove " (including hierarchical order)" from the documentation. I don't think that status hierarchy is consid...
- 12:00 PM Revision 491a217c (cdm-dataportal): ref #10330: adapt description
- 10:48 AM bug #10427 (Closed): Exception in NodeSelection Dialog when no classification is selected
- Works as expected, now.
- 10:37 AM bug #10428 (Closed): Distribution Selection in Distribution Editor throws NPE
- Works as expected now.
- 10:34 AM bug #10428: Distribution Selection in Distribution Editor throws NPE
- Also it is important to say, that this needs to be done while the TaxEditor is closed, otherwise the pref is saved ag...
- 10:30 AM bug #10428: Distribution Selection in Distribution Editor throws NPE
- Katja Luther wrote in #note-1:
> PLease review. You have to delete the line with "distribution.area.terms_cybertaxon...
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