Activity
From 12/16/2021 to 01/14/2022
01/14/2022
- 10:10 PM Revision 87b297f0 (cdmlib): fix pluginManagement for m2e in cdmlib-model and -test
- 09:41 PM Revision e3dab47f (cdmlib): minor
- 09:14 PM Revision cd0cc937 (cdmlib): add pluginManagement tag to avoid error for <execution> tag
- 09:13 PM Revision ec0b7ed7 (cdmlib): remove commented version from dependencies in cdmlib-db
- 06:28 PM bug #9917 (In Progress): etopo1 broken due to server migration at noaa.gov
- 05:29 PM bug #9917: etopo1 broken due to server migration at noaa.gov
- see mapproxy git repo branch `nooa-etopo1-fix` for a first attempt to fix this in mapproxy
- 05:17 PM bug #9917 (Closed): etopo1 broken due to server migration at noaa.gov
- The map service at noaa has been moved to a new server and map are thus available from new service endpoints:
Docu... - 04:54 PM Revision b7770b03 (utis-webapp): updating doc on docker-compose setup
- 04:22 PM bug #9916 (Resolved): Tooltip for data cells in bulkeditor
- Please review.
- 04:21 PM bug #9916 (Closed): Tooltip for data cells in bulkeditor
- mail AM:
ich habe kürzlich beim Datacleaning festgestellt, dass bei den Bulk Editor NAT Tables beim Mouse Over das... - 04:18 PM Revision 7dd447df (taxeditor): tooltips for data fields in bulk editor
- 03:43 PM feature request #9915 (Closed): Make "accessed" also available for references of type "database"
- "Accessed" already exists for websites. Websites and databases are usually dynamic references and therefore maybe ci...
- 02:04 PM Revision 1ce79b2f (utis-webapp): updating documentation: set up for docker-compose
- 10:09 AM bug #9236 (Closed): stopping an instance breaks the centralized logging
- This works as expected.
01/13/2022
- 05:56 PM Revision dbdfb62b (cdm-server): ref #9236 better solution to solve the broken logging: disable the LogbackServletContainerInitializer per webapp init parameter
- 04:54 PM bug #9236: stopping an instance breaks the centralized logging
- solved by excluding the LogbackServletContainerInitializer from the configuration.
Please review - 04:53 PM bug #9236 (Resolved): stopping an instance breaks the centralized logging
- Applied in changeset commit:cdm-server|7ba74c603e769569dd1b0052949cd321c86722da.
- 12:05 PM bug #9236 (In Progress): stopping an instance breaks the centralized logging
- 11:29 AM bug #9236: stopping an instance breaks the centralized logging
- The problem is caused by the `LoggerContext` being shutdown by the `LogbackServletContextListener` in `LogbackServlet...
- 04:53 PM Revision 7ba74c60 (cdm-server): fix #9236 solving broken logging by excluding the LogbackServletContainerInitializer from the configuration
- 04:02 PM Revision c374a931 (cdm-server): updating documentation and removing class names from ServerClassPatterns
- 12:25 AM Revision 6c2676d4 (cdm-webapp): update EditRepository to https
- 12:20 AM Revision 4e578566 (cdm-vaadin): update EditRepository to https
- 12:14 AM Revision 5b0327d4 (cdmlib): set default source mode for distribution aggregation from child to parent to NONE
01/12/2022
- 11:59 PM Revision 68f3f710 (taxeditor): minor
- 11:51 PM Revision d9d7beec (cdmlib): ref #9359 revert update hsqldb in cdmlib (cont.)
- 11:49 PM Revision 92b76e20 (cdmlib): ref #9359 revert update hsqldb in cdmlib
- 10:11 PM Revision 94b2bce7 (taxeditor): ref #9359 update xercesImpl in taxeditor (cont.)
- 09:55 PM Revision b2c85611 (taxeditor): use https for EditRepository
- 09:42 PM Revision 81d08f97 (taxeditor): remove xstream from gitattributes
- 09:41 PM Revision 28e80be0 (cdmlib): ref #9359 update plexus-utils in cdmlib (fix compile error)
- 09:33 PM Revision 9b8c99b3 (taxeditor): ref #9359 update mysql and postgresql in taxEditor (cont.)
- 09:06 PM Revision e8d0eec7 (taxeditor): minor
- 09:06 PM Revision 23f8a87b (taxeditor): ref #9359 update aspectj in taxeditor
- 09:00 PM Revision 80a26358 (cdmlib): ref #9359 update aspectj in cdmlib
- 08:55 PM Revision b3321396 (cdmlib): ref #9359 update plexus-utils in cdmlib
- 08:52 PM Revision 3bdc6b29 (cdmlib): ref #9359 update hsqldb in cdmlib
- 08:43 PM Revision 2ebe2266 (taxeditor): ref #9359 update xercesImpl in taxeditor
- 08:42 PM Revision fb0a7a66 (cdmlib): ref #9359 update xercesImpl in cdmlib
- 08:40 PM Revision 942ddf0b (cdmlib): ref #9359 update mysql, postgresql and mssql in cdmlib
- 08:36 PM Revision bde4e213 (taxeditor): ref #9359 update mysql and postgresql in taxEditor
- 08:34 PM Revision 13a023fd (cdmlib): ref #9359 update xmlgraphics-commons (only needed in cdmlib-print)
- 08:28 PM Revision 3078719c (cdmlib): minor
- 03:56 PM bug #9914 (Resolved): Series part in nomenclatural sources should have a space prefix if it starts with a letter
- 03:44 PM bug #9914 (Closed): Series part in nomenclatural sources should have a space prefix if it starts with a letter
- ... and if they are not purely numeric
- 03:45 PM Revision 5f08d366 (cdmlib): ref #9914 add space before seriesPart in nom.refs.
- 03:21 PM bug #9913: TypeDesignationEditor: Sub collections without code show blank in the collection select
- Collection select is fixed, fine.
But another critical error appeared:
the values of two different specimens ar...
01/11/2022
- 09:49 PM Revision 8ae14d10 (cdm-server): removing jdk 7 stuff from memory service
- 02:55 PM Revision 2d14fa05 (utis-core): logging of store updates
- 12:45 PM bug #9913: TypeDesignationEditor: Sub collections without code show blank in the collection select
- Problem solved, please review.
- 12:45 PM bug #9913 (Resolved): TypeDesignationEditor: Sub collections without code show blank in the collection select
- Applied in changeset commit:cdm-vaadin|48936d85bd57c3a6cbb45f2c9d0d47bc55380380.
- 12:08 PM bug #9913 (Closed): TypeDesignationEditor: Sub collections without code show blank in the collection select
- 12:45 PM Revision 7602f1db (cdm-vaadin): fixing NPE
- 12:44 PM Revision 48936d85 (cdm-vaadin): fix #9913 fixing collection label in select lists
01/10/2022
- 02:51 PM Revision fcf7d716 (cdm-server): cleanup
- 02:42 PM Revision 7db3087c (cdm-dataportal): Update installation instruction link
- 01:25 PM bug #9912 (New): java.lang.ClassCastException: [Ljava.lang.String; cannot be cast to java.lang.String in TaxonGraphBeforeTransactionCompleteProcess L229
- `TAXONNAME_NOMENCLATURALSOURCE` is an array, so below code line in `TaxonGraphBeforeTransactionCompleteProcess` fails...
- 12:20 PM Revision 1372d044 (cdm-server): remove deprecated methods
- 11:45 AM Revision fe676284 (cdmlib): upgrading media-info-model to latest version 1.2.0
01/07/2022
- 10:57 AM Revision e5cb086b (cdmlib): minor
01/05/2022
- 03:39 PM bug #9911 (New): Expand area search to adjacent countries
- Suggestion from David Merrick:
... Also you could have an "expand to adjacent countries" if the page knows for eac... - 03:15 PM bug #9802: Label for min=max does not unify values in Matrix QuantitativeData label provider
- Katja Luther wrote:
> > Also the label provider for the factual data view handles the issue correct. Is there a reas... - 02:39 PM bug #9802: Label for min=max does not unify values in Matrix QuantitativeData label provider
- > Also the label provider for the factual data view handles the issue correct. Is there a reason why we do not use th...
- 03:02 PM Revision 498bb6e4 (taxeditor): ref #9894: remove strange import
- 02:24 PM Revision 72e2be95 (cdmlib): ref #9607 try metadata reading client side if error occurs server side
- 02:07 PM Revision 32b18aed (cdm-server): cleanup
- 02:02 PM Revision 68e2422c (cdm-server): Adapt organizationUrl
- 02:02 PM Revision 1bc53106 (cdm-server): remove PermGenSpace constants
- 01:04 PM feature request #9894 (Resolved): Make primary collector editable for field unit
- This is implemented with a selection dialog, maybe it would be easier to use with a drop down, filled with the team m...
- 01:01 PM Revision 4faee5bc (taxeditor): ref #9894: add field primary collector and handle as described in ticket
- 12:27 PM feature request #9910 (New): Add configurable flag for common name search in dataportal simple search
- Some portals may want to have a common name search flag included in simple search (similar to include misaplication f...
- 10:16 AM task #9909 (New): Think about using the checker framework to avoid e.g. NPEs
- https://checkerframework.org/manual/
01/04/2022
- 03:17 PM bug #9882 (Resolved): Null argument when deleting description in bulkeditor
- Katja Luther wrote:
> The original problem is solved, but there is another issue. The deletion of the description el... - 02:47 PM bug #9895 (Resolved): Multiple representations of the same entity after move of synonym
- This is fixed,please review.
- 02:47 PM Revision cd505f6b (cdmlib): ref #9895: fix MRE when moving synonym to an already open taxon
- 02:15 PM Revision 495cf16b (cdmlib): ref #9907: fix missing treeIndex in taxonNodeDto - continue
- 01:49 PM bug #9907 (Resolved): NPE when trying to create polytomous key
- This should be fixed.
- 01:44 PM bug #9907: NPE when trying to create polytomous key
- This exception is caused by the missing treeIndex in nodeDto.
- 01:44 PM bug #9907 (Closed): NPE when trying to create polytomous key
- mail Murat Erdem Guzel:
We tried to "generate polytomous key" for our group. However, we got the following error m... - 01:48 PM bug #9900 (Resolved): Null values in agent search dialog
- This should be fixed.
- 01:47 PM feature request #9908 (Closed): Add timeperiod to credits
- for further explanation see #9906#note-1
- 01:45 PM Revision 523bd6bc (cdmlib): ref #9907: fix missing treeIndex in taxonNodeDto
- 12:21 PM Revision 1cc04f46 (taxeditor): change product version
- 11:07 AM Revision 4716220c (taxeditor): minor
- 10:22 AM Revision ac1d2808 (taxeditor): minor
- 09:52 AM feature request #9906: Implement credits in dataportal
- ERS:
eine Frage zur Portal-Gestaltung: im Cichorieae-Portal gibt es auf einzelnen Taxon-Seiten die Kategorie “Cred... - 09:49 AM feature request #9906 (New): Implement credits in dataportal
- Credits are editable in TaxEditor but currently not yet visible in the CDM dataportals. However, in future they will ...
01/03/2022
- 10:08 PM bug #9905 (In Progress): Parser is slow for names with authorteams
- 09:58 PM bug #9905 (Closed): Parser is slow for names with authorteams
- Probably the reason is that potential deduplication candidates are not found correctly and the list of candidates is ...
- 04:48 PM Revision 6c29ac64 (taxeditor): minor
- 04:48 PM Revision 0489e98a (taxeditor): ref #9359 update iiif-apis and javassist version in taxeditor (cont.)
- 03:31 PM Revision bbab5719 (taxeditor): minor
- 03:13 PM Revision 3b421286 (taxeditor): revert removing commons.httpclient in rcp.target
- 03:04 PM Revision c6e3c294 (cdmlib): ref #9359 update ant version in cdmlib
- 03:01 PM Revision bfa2a878 (taxeditor): ref #9359 update iiif-apis and javassist version in taxeditor
- 02:53 PM Revision 98b42ca6 (cdmlib): minor
- 02:52 PM Revision 3837f479 (cdmlib): ref #9359 update doxia, objenesis, iiif-apis, xom, Saxon-HE and javassist version in cdmlib
- 02:47 PM Revision c311c134 (taxeditor): minor
- 02:47 PM Revision 1fbecc37 (taxeditor): ref #9359 fix junit version in taxeditor.test build.properties
- 02:46 PM Revision 53aa6cb3 (taxeditor): ref #9359 revert httpclient.version to httpcomponents.version in taxeditor
- 02:40 PM Revision 39287958 (cdmlib): ref #9359 update httpcore version in cdmlib
- 02:23 PM Revision f2e2fe71 (taxeditor): ref #9359 fix artifactID for httpcore in taxeditor
- 02:12 PM Revision 797afa38 (taxeditor): ref #9359 update httpclient, httpclient-cache and httpcore version in taxeditor
- 01:54 PM Revision 284634e7 (taxeditor): adapt feature to new version of apache httpcomponents - continue
- 01:12 PM Revision 92d78f9c (taxeditor): adapt rcp.target to new version of apache httpcomponents
- 12:55 PM Revision 68c6de2c (taxeditor): adapt feature to new version of apache httpcomponents
- 12:11 PM Revision 0f130bb7 (taxeditor): revert rename of jre product definition
- 11:38 AM Revision 1680ec19 (taxeditor): minor, only test update handler
12/23/2021
- 10:52 AM bug #9904 (Closed): NullPointerException (NPE) in ListView with filter name="Stephano"
- fixed!
Now the validation errors are visible gain:
 - 10:51 AM bug #9904 (Resolved): NullPointerException (NPE) in ListView with filter name="Stephano"
- Applied in changeset commit:cdmlib|00e4c79fbb7ae6fa6a5c911072ab1b6e0d8ccd7a.
- 10:46 AM bug #9904: NullPointerException (NPE) in ListView with filter name="Stephano"
- and is caused by a validation error ("Inconsistent type designations") in which case the `summaryText` in `Registrat...
- 10:39 AM bug #9904: NullPointerException (NPE) in ListView with filter name="Stephano"
- this happens for the registration http://phycobank.org/4680
- 10:34 AM bug #9904 (Closed): NullPointerException (NPE) in ListView with filter name="Stephano"
~~~
[phycobank] 10:31:11,561 DEBUG [qtp1161667116-25][eu.et.cd.va.pe.AccessRestrictedViewControlBean] - allowing...- 10:51 AM Revision 00e4c79f (cdmlib): fix #9904 avoiding null value for RegistrationDT0.summaryTaggedText
- 10:04 AM Revision 54d7e850 (cdm-vaadin): proper logging instead of system.out
- 10:03 AM Revision d6a88817 (cdm-vaadin): cleaning up obsolete class
12/22/2021
- 12:08 AM Revision 8def85fa (taxeditor): update spring version in MANIFEST.MF and build.properties
- 12:01 AM Revision 2b7f1be4 (taxeditor): ref #9359 updating jackson and fop to latest version in taxeditor
12/21/2021
- 11:56 PM Revision 8f7ca08d (taxeditor): ref #9359 updating junit and joda-time to latest version in taxeditor (cont.)
- 11:50 PM Revision c31fcd9c (taxeditor): ref #9359 updating commons-lang3 to latest version in taxeditor (cont.)
- 11:23 PM Revision 594bfa10 (taxeditor): remove dozer from gitattributes
- 11:23 PM Revision 9884d3db (taxeditor): ref #9359 updating junit and joda-time to latest version in taxeditor
- 11:22 PM Revision fd27a29d (cdmlib): ref #9359 updating junit and joda-time to latest version in cdmlib
- 11:08 PM Revision 92605e20 (taxeditor): ref #9359 updating commons-lang3 to latest version in taxeditor
- 11:07 PM Revision e2a36780 (cdmlib): ref #9359 updating commons-lang3 to latest version in cdmlib
- 11:03 PM Revision 6b7f04a6 (taxeditor): ref #9359 updating jackson and fop to latest version in taxeditor
- 11:01 PM Revision 2425ff4f (cdmlib): ref #9359 updating jackson, dozer, fop and guava to latest version in cdmlib
- 10:30 PM Revision 5ba4170a (taxeditor): cleanup pom developer data and ci URL to https
- 10:24 PM Revision 886a4b2e (cdmlib): ref #9359 update spring security OAuth2 to 2.5.1 in cdmlib
- 10:23 PM Revision a623e437 (cdmlib): update organizationURL
- 09:56 PM Revision c6e48a0a (taxeditor): ref #9359 update spring to 4.3.30 in taxeditor and use mvn properties for spring version
- 09:50 PM Revision 46ddc021 (cdmlib): ref #9359 update spring to 4.3.30 in cdmlib
- 09:37 PM Revision 3267b6d8 (taxeditor): cleanup
- 06:36 PM feature request #9903 (Closed): disable common name search in defaults
- 06:28 PM feature request #9903 (Resolved): disable common name search in defaults
- Applied in changeset commit:cdm-dataportal|868cf790da78a99a626c7544a5ef512cdd28e002.
- 06:26 PM feature request #9903 (Closed): disable common name search in defaults
- Common Name Suche sollte m.E. auf jeden Fall ausgeschaltet sein per Default.
- 06:28 PM Revision 868cf790 (cdm-dataportal): fix #9903 common name search disabled by default
- 06:13 PM Revision 058c75f7 (taxeditor): ref #9359 httpcomponents to 4.5.13 and spring-security to 4.2.20 in taxeditor
- 06:12 PM Revision 58cfb4c1 (cdmlib): cleanup
- 06:11 PM Revision 5bda5597 (cdmlib): ref #9359 httpcomponents to 4.5.13 and spring-security to 4.2.20 in cdmlib
- 05:57 PM Revision 9c73e70f (cdmlib): ref #9359 update commons-compress to 1.21
- 05:54 PM Revision 624722d8 (cdm-server): cleanup
- 02:03 PM feature request #9902 (New): Add possibility to clear area filter in advanced search
- Request from Davie Merrick: "The place filter works well. Can I suggest there be an option to clear the filter. "
- 09:00 AM Revision eee93087 (taxeditor): ref #9900: fix consistent use of abbrev title for authors of nomenclatural reference - continue
12/20/2021
12/19/2021
- 01:02 AM Revision 847b908a (cdm-server): remove some more PermSize and MaxPermSize
- 12:54 AM Revision b396b65c (cdm-server): Replace deprecated GnuParser by DefaultParser
- 12:53 AM Revision d8a13c97 (cdm-server): cleanup
12/17/2021
- 11:54 PM Revision 3baaf1b2 (cdmlib): ref #9607 remove redundant method in IMediaInfoFactory
- 11:54 PM Revision f37ad6bb (cdmlib): cleanup
- 02:59 PM bug #9901 (In Progress): Remove unique key Media_RightsInfo.rights_id
- 02:59 PM bug #9901 (Closed): Remove unique key Media_RightsInfo.rights_id
- Some DBs still have this key but as rights are reusable now this is not correct.
~~~
ALTER TABLE `Media_RightsInf... - 01:36 PM Revision d82999cd (taxeditor): ref #9900: fix consistent use of abbrev title for authors of nomenclatural reference
- 11:42 AM bug #9900 (Closed): Null values in agent search dialog
- mail AM:
schon seit längerem ist mir aufgefallen, dass bei der Anzeige von Personen im Dialog etwas nicht stimmt. ...
12/16/2021
- 04:28 PM Revision a9ee539b (cdm-dataportal): Merge tag '5.28.1' into develop
- tagging 5.28.1
- 04:28 PM Revision 5726a297 (cdm-dataportal): Merge branch 'hotfix/5.28.1'
- 04:28 PM Revision 4f63f56d (cdm-dataportal): diabling WoRMS due to unresolved potential copyright issues
- 04:26 PM Revision 936c6844 (cdm-dataportal): diabling WoRMS due to unresolved potential copyright issues
- 01:52 PM Revision 22845878 (cdmlib): fix exception in delete of specimen
- 01:17 PM Revision 95fa5b49 (utis-core): updating log4j configuration
- 01:05 PM Revision a2f52132 (utis-core): replacing all system.err/out to proper logging
- 11:57 AM Revision a9d074d6 (utis-webapp): ref #9899 updating log4j to latest version >=2.16.0
- 11:56 AM Revision 02d98cb4 (utis-core): ref #9899 updating log4j to latest version >=2.16.0
- 11:55 AM Revision bc1fb5b4 (utis-core): gitignore
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