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From 07/20/2016 to 08/18/2016

08/18/2016

03:11 PM Revision 1b6fc97e (taxeditor): fix #5988 Add Checklist Editor to generic "Open in..." menu
Patrick Plitzner
03:11 PM Revision 28861 (edit-svn): fix #5988 Add Checklist Editor to generic "Open in..." menu
Patrick Plitzner
02:30 PM bug #6040 (Duplicate): Move "Open in Checklist editor" to generic "Open in..." menu
Patrick Plitzner
02:07 PM Revision a56c8dc5 (taxeditor): Set focus to search field for specimen editor
Patrick Plitzner
02:07 PM Revision 28860 (edit-svn): Set focus to search field for specimen editor
Patrick Plitzner
02:07 PM Revision adab7c46 (taxeditor): Fix potential NPE
Patrick Plitzner
02:07 PM Revision 28859 (edit-svn): Fix potential NPE
Patrick Plitzner
02:00 PM Revision 88bb0ffb (taxeditor): fix #5796 Set focus to search field in bulk editor
Patrick Plitzner
02:00 PM Revision 28858 (edit-svn): fix #5796 Set focus to search field in bulk editor
Patrick Plitzner
12:16 PM Revision b1653604 (taxeditor): Fix multiple key exception for sequence->contigFile and
singleRead->pherogram Patrick Plitzner
12:16 PM Revision 28857 (edit-svn): Fix multiple key exception for sequence->contigFile and
singleRead->pherogram Patrick Plitzner
12:06 PM Revision 61151d12 (taxeditor): minor refactoring
Patrick Plitzner
12:06 PM Revision 28856 (edit-svn): minor refactoring
Patrick Plitzner
12:06 PM Revision f8c5be88 (taxeditor): Fix potential "Widget is disposed" exception
Patrick Plitzner
12:06 PM Revision 28855 (edit-svn): Fix potential "Widget is disposed" exception
Patrick Plitzner

08/16/2016

11:56 AM Revision d783abbf (taxeditor): Fix endless loop in entity cache when opening "Inspect Active Session"
Patrick Plitzner
11:56 AM Revision 28854 (edit-svn): Fix endless loop in entity cache when opening "Inspect Active Session"
Patrick Plitzner
09:39 AM Revision c59462b2 (cdmlib): Remove @Ignore from test
Patrick Plitzner
09:39 AM Revision 28853 (edit-svn): Remove @Ignore from test
Patrick Plitzner

08/15/2016

03:51 PM Revision 777a1b03 (cdmlib): Fix merge problems
Patrick Plitzner
03:51 PM Revision 28852 (edit-svn): Fix merge problems
Patrick Plitzner
03:05 PM Revision 1bf155ea (cdmlib): fix #6001 Clean up multiple sourceNotLinked() methods
Patrick Plitzner
03:05 PM Revision 28851 (edit-svn): fix #6001 Clean up multiple sourceNotLinked() methods
Patrick Plitzner
10:38 AM Revision e1207484 (cdmlib): Fix titlecache issues for specimen table in data portal
- Use Link class for every link
- Open all links in new window
Patrick Plitzner
10:38 AM Revision 28850 (edit-svn): - Use Link class for every link
- Open all links in new window Patrick Plitzner
10:38 AM Revision 28849 (edit-svn): Fix titlecache issues for specimen table in data portal
- Use Link class for every link
- Open all links in new window
Patrick Plitzner
08:47 AM Revision 65a4de51 (cdm-dataportal): - Use Link class for every link
- Open all links in new window Patrick Plitzner

08/12/2016

12:10 PM Revision 22244d5f (taxeditor): fix failing test
Katja Luther
12:10 PM Revision 28848 (edit-svn): fix failing test
Katja Luther
10:26 AM Revision 0a50c93b (cdmlib): smaller changes
Katja Luther
10:26 AM Revision 28847 (edit-svn): smaller changes
Katja Luther
10:16 AM Revision 0d19c47e (taxeditor): changes for gbif/abcd import from webservice
Katja Luther
10:16 AM Revision 28846 (edit-svn): changes for gbif/abcd import from webservice
Katja Luther
10:07 AM Revision 7681fbb3 (taxeditor): line endings again...
Katja Luther
10:07 AM Revision 28845 (edit-svn): line endings again...
Katja Luther
09:49 AM Revision 253ccd8a (cdmlib): specimen import changes
Katja Luther
09:49 AM Revision 28844 (edit-svn): specimen import changes
Katja Luther

08/11/2016

03:30 PM bug #6040 (Duplicate): Move "Open in Checklist editor" to generic "Open in..." menu
Note: You have to enable the checklist editor in the preferences Patrick Plitzner
03:26 PM Revision 5c228c71 (taxeditor): Fix specimen editor label provider for still images
Patrick Plitzner
03:26 PM Revision 28843 (edit-svn): Fix specimen editor label provider for still images
Patrick Plitzner
03:20 PM Revision 66b0c98f (taxeditor): Import specimen scans with StillImage type
Patrick Plitzner
03:20 PM Revision 28842 (edit-svn): Import specimen scans with StillImage type
Patrick Plitzner
03:20 PM Revision 85396070 (cdmlib): Import specimen scans with StillImage type
Patrick Plitzner
03:20 PM Revision 28841 (edit-svn): Import specimen scans with StillImage type
Patrick Plitzner
03:19 PM Revision c7699d82 (cdmlib): Remove unneccesary casts
Patrick Plitzner
03:19 PM Revision 28840 (edit-svn): Remove unneccesary casts
Patrick Plitzner
02:35 PM Revision 97278383 (taxeditor): ref #5305 Refactored combo elements
Patrick Plitzner
02:35 PM Revision 28839 (edit-svn): ref #5305 Refactored combo elements
Patrick Plitzner
11:38 AM feature request #6039 (New): [DISCUSS] Order of specimen details view sections
We should discuss where the sections "Taxon Associations", "Determinations" and "TypeDesignation" should be shown and... Patrick Plitzner
10:15 AM bug #6038 (Rejected): [Redmine] NoScript detects CrossSiteScritping for Redmine
I experienced this warning directly after logging in and when using one of my bookmarks which shows all my open issue... Patrick Plitzner

08/10/2016

05:50 PM Revision 224b66a3 (taxeditor): fix #5305 Set max width of combo elements to 50px
Patrick Plitzner
05:50 PM Revision 28838 (edit-svn): fix #5305 Set max width of combo elements to 50px
Patrick Plitzner
03:15 PM Revision a83b0d46 (taxeditor): ref #5348 Wrap text of taxon associations
Patrick Plitzner
03:15 PM Revision 28837 (edit-svn): ref #5348 Wrap text of taxon associations
Patrick Plitzner
01:08 PM Revision ed04d0e4 (taxeditor): fix #5348 Add "copy" context menu to taxon association details view
Patrick Plitzner
01:08 PM Revision 28836 (edit-svn): fix #5348 Add "copy" context menu to taxon association details view
Patrick Plitzner
10:14 AM Revision 90c63a60 (cdmlib): ref #5448 Change abbreviation for unranked infraspecific rank
Patrick Plitzner
10:14 AM Revision 28835 (edit-svn): ref #5448 Change abbreviation for unranked infraspecific rank
Patrick Plitzner
10:10 AM Revision 66a8c419 (taxeditor): simplify taxon association section code
Patrick Plitzner
10:10 AM Revision 28834 (edit-svn): simplify taxon association section code
Patrick Plitzner

08/09/2016

01:35 PM Revision 1977e94a (taxeditor): Disable default handler for opening referencing objects view to avoid
that menu item showing up in every context Patrick Plitzner
01:35 PM Revision 28833 (edit-svn): Disable default handler for opening referencing objects view to avoid
that menu item showing up in every context Patrick Plitzner
11:28 AM Revision ef9f1df0 (taxeditor): ref #5348 Reduce space of taxon associations
- Use generic open framework for double-click on list item Patrick Plitzner
11:28 AM Revision 28832 (edit-svn): ref #5348 Reduce space of taxon associations
- Use generic open framework for double-click on list item Patrick Plitzner

08/08/2016

05:03 PM feature request #5616 (Feedback): Add the"Open in..." menu to taxon search
Patrick Plitzner
04:58 PM Revision 1d81ea4a (taxeditor): ref #5616 Add alternative to double click execution in search view
- Opens either in name or bulk editor Patrick Plitzner
04:58 PM Revision 28831 (edit-svn): ref #5616 Add alternative to double click execution in search view
- Opens either in name or bulk editor Patrick Plitzner
04:35 PM Revision 222d6e76 (taxeditor): ref #5616 Fix possible NPE for BulkEditor inputs
Patrick Plitzner
04:35 PM Revision 28830 (edit-svn): ref #5616 Fix possible NPE for BulkEditor inputs
Patrick Plitzner
04:25 PM Revision 12a605bc (taxeditor): ref #5616 "Open in bulke editor" for taxa in taxon search view
Patrick Plitzner
04:25 PM Revision 28829 (edit-svn): ref #5616 "Open in bulke editor" for taxa in taxon search view
Patrick Plitzner

08/04/2016

10:16 PM Revision 565df21b (cdmlib-apps): ref #6026 first basic import of types
Andreas Kohlbecker
10:16 PM Revision 28828 (edit-svn): ref #6026 first basic import of types
Andreas Kohlbecker
02:31 PM feature request #6037: Allow intermediate commits in Excel import
Hi Andreas,
can you please verify my implementation?
Andreas
Andreas Kohlbecker
02:30 PM feature request #6037 (Resolved): Allow intermediate commits in Excel import
Applied in changeset edit-svn|r28827. Andreas Kohlbecker
02:28 PM feature request #6037 (Rejected): Allow intermediate commits in Excel import
For developing purposes it is better to allow the Excel imports to commit after a batch of lines have been imported.
...
Andreas Kohlbecker
02:30 PM Revision 53067226 (cdmlib): fix #6037 per batch transction commit implemented for excel imports
Andreas Kohlbecker
02:30 PM Revision 28827 (edit-svn): fix #6037 per batch transction commit implemented for excel imports
Andreas Kohlbecker
12:17 PM bug #6036 (Closed): Problems with deleting type names
Split of #5490
mail of Walter:
Eine Art wurde sowohl als Typus einer Gattung als auch anschließend neu als Taxon ...
Patrick Plitzner
10:58 AM Revision 956da1e4 (taxeditor): fix #5953 Save open/close states of detail view sections for specific
data types Patrick Plitzner
10:58 AM Revision 28826 (edit-svn): fix #5953 Save open/close states of detail view sections for specific
data types Patrick Plitzner

08/03/2016

06:39 PM Revision ae5816a7 (taxeditor): Avoid double rendering of concept view
Patrick Plitzner
06:39 PM Revision 28825 (edit-svn): fix #5801 Make concept relations view work with taxon bulk editor
Patrick Plitzner
06:39 PM Revision 28824 (edit-svn): Avoid double rendering of concept view
Patrick Plitzner
05:15 PM Revision 2d7d6704 (taxeditor): fix #5801 Make concept relations view work with taxon bulk editor
Patrick Plitzner
04:09 PM Revision 1a924f2f (cdmlib-apps): ref #6026 multiple improvements
- better ranks for incertis sedis and old Classes
- Caveats as annotations
Andreas Kohlbecker
04:09 PM Revision 28823 (edit-svn): ref #6026 multiple improvements
- better ranks for incertis sedis and old Classes
- Caveats as annotations
Andreas Kohlbecker
03:31 PM Revision ae2183bb (taxeditor): fix #5853 Support relationships in referencing objects view
Patrick Plitzner
03:31 PM Revision 28822 (edit-svn): fix #5853 Support relationships in referencing objects view
Patrick Plitzner
03:18 PM Revision 799bc964 (cdmlib-apps): #5448 Fix import of hybrid formula
Patrick Plitzner
03:18 PM Revision 28821 (edit-svn): #5448 Fix import of hybrid formula
Patrick Plitzner
02:20 PM Revision 4a61004b (cdmlib-apps): ref #5448 code cleanup
Patrick Plitzner
02:20 PM Revision 28820 (edit-svn): ref #5448 code cleanup
Patrick Plitzner
02:20 PM Revision 16c76ded (cdmlib-apps): #5448 Refactor hybrid name import/check
Patrick Plitzner
02:20 PM Revision 28819 (edit-svn): #5448 Refactor hybrid name import/check
Patrick Plitzner
10:38 AM Revision d2a9d564 (cdmlib-apps): #5448 Use SEQNUM as id column
- enhance hybrid name check Patrick Plitzner
10:38 AM Revision 28818 (edit-svn): #5448 Use SEQNUM as id column
- enhance hybrid name check Patrick Plitzner
07:52 AM Revision e7ed2bb6 (cdmlib-apps): ref #6026 multiple improvements
- importing notes as annotations
- improved rank guessing
- solving performance problems related to classification ...
Andreas Kohlbecker
07:52 AM Revision 28817 (edit-svn): ref #6026 multiple improvements
- importing notes as annotations
- improved rank guessing
- solving performance problems related to classification ...
Andreas Kohlbecker

08/02/2016

04:14 PM bug #6032 (Rejected): Name parser support for hybrid ranks
The rank should be considered when parsing hybrid names like "Berberis aggregata aggregata × Berberis wilsoniae aggre... Patrick Plitzner
03:37 PM bug #6031 (New): Name parser support for multiple hybrids
Name parser should be able to parse names like "Betula humilis × pendula × pubescens" Patrick Plitzner
03:35 PM bug #6030 (Closed): Name parser support for genus hybrids
Currently the name parser is not able to parse names like "Orchis × Platanthera" Patrick Plitzner
11:45 AM Revision e8f97f69 (cdmlib-apps): #5448 Import genus hybrid formulas
Patrick Plitzner
11:45 AM Revision 28816 (edit-svn): #5448 Import genus hybrid formulas
Patrick Plitzner
10:21 AM Revision 28815 (edit-svn): ref #6026 multiple improvements
- better handling of fossil taxa
- Authors spelling as misspellings
- fix related to publication year
- "Author...
Andreas Kohlbecker
10:21 AM Revision f261b330 (cdmlib-apps): ref #6026 multiple improvements
- better handling of fossil taxa
- Authors spelling as misspellings
- fix related to publication year
- "Author...
Andreas Kohlbecker
08:26 AM task #6029 (Closed): trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
The resolution is migrated correctly to the redmine custom field `Resolution` but the `Status` always is closed, see ... Andreas Kohlbecker
08:25 AM task #6028 (Closed): Post-migration (trac->redmine) fixes
After the final migration from trac to redmine problems have been discovered which should have been solved during the... Andreas Kohlbecker
08:05 AM task #6005: Create subprojects of EDIT platform components
supproject created for cdmlib-app, for now only with one issue.
We should check the 'components' given to the cdmlib...
Andreas Kohlbecker

08/01/2016

08:56 PM Revision 3cbc3bec (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (IX)
Andreas Müller
08:56 PM Revision 28814 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (IX)
Andreas Müller
08:52 PM Revision 411d6090 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (VIII)
Andreas Müller
08:52 PM Revision 28813 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (VIII)
Andreas Müller
08:26 PM Revision 81c49785 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (VII)
Andreas Müller
08:26 PM Revision 28812 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (VII)
Andreas Müller
07:17 PM Revision ecdf2b45 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (VI)
Andreas Müller
07:17 PM Revision 28811 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (VI)
Andreas Müller
07:10 PM Revision 32c7e878 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (V)
Andreas Müller
07:10 PM Revision 28810 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (V)
Andreas Müller
07:01 PM Revision 38556693 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (IV)
Andreas Müller
07:01 PM Revision 28809 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (IV)
Andreas Müller
06:27 PM Revision 7de68329 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (III)
Andreas Müller
06:27 PM Revision 28808 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (III)
Andreas Müller
06:23 PM Revision dbd1c8d4 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (II)
Andreas Müller
06:23 PM Revision 28807 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp (II)
Andreas Müller
04:48 PM Revision 11cf8ce2 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp
Andreas Müller
04:48 PM Revision 28806 (edit-svn): #5751 Try to fix dependency copy in taxeditor.wepapp
Andreas Müller
04:30 PM Revision 28805 (edit-svn): Remove duplicate dependency to cdmlib-model in taxeditor.cdmlib
Andreas Müller
04:30 PM Revision 28804 (edit-svn): #6026 import of taxa and names working
Andreas Kohlbecker
04:30 PM Revision 4cebdf13 (cdmlib-apps): #6026 import of taxa and names working
Andreas Kohlbecker
04:24 PM Revision efc0b0fa (taxeditor): Remove duplicate dependency to cdmlib-model in taxeditor.cdmlib
Andreas Müller
04:13 PM Revision bff672e1 (cdmlib): #5751 remove version numbers from cdmlib-db and some cleanup
Andreas Müller
04:13 PM Revision 28803 (edit-svn): #5751 remove version numbers from cdmlib-db and some cleanup
Andreas Müller
03:20 PM Revision 13a5f154 (cdmlib): #5751 finish redo r28780
* use cdmlib-test in persistence for 2 antrun plugin and hibernate3 plugin Andreas Müller
03:20 PM Revision 28802 (edit-svn): #5751 finish redo r28780
* use cdmlib-test in persistence for 2 antrun plugin and hibernate3 plugin Andreas Müller
03:15 PM Revision 40d434ac (cdmlib): #5751 Partly redo r28780,
* remove com.mchange from cdmlib-remote-webapp test scope
* use cdmlib-db in persistence for 2 further plugins
Andreas Müller
03:15 PM Revision 28801 (edit-svn): #5751 Partly redo r28780,
* remove com.mchange from cdmlib-remote-webapp test scope
* use cdmlib-db in persistence for 2 further plugins
Andreas Müller
02:51 PM Revision 28800 (edit-svn): #5448 Support corner cases
- SPI and KMB as ranks
- nomenclatural status type
- HYB name checking
Patrick Plitzner
02:51 PM Revision 28799 (edit-svn): #5448 Handle rank "SPI"
Patrick Plitzner
02:51 PM Revision 28798 (edit-svn): #5448 Import non-CDM ranks
Patrick Plitzner
02:51 PM Revision 28797 (edit-svn): #5448 Remove non-exisiting hybrid category
Patrick Plitzner
02:51 PM Revision 28796 (edit-svn): #5448 Import HYB 'nf'
Patrick Plitzner
02:51 PM Revision 28795 (edit-svn): #5448 Import rank "SAM"
Patrick Plitzner
02:51 PM Revision 16152631 (cdmlib-apps): #5448 Support corner cases
- SPI and KMB as ranks
- nomenclatural status type
- HYB name checking
Patrick Plitzner
02:51 PM Revision 602d7086 (cdmlib-apps): #5448 Handle rank "SPI"
Patrick Plitzner
02:51 PM Revision 3d438891 (cdmlib-apps): #5448 Import non-CDM ranks
Patrick Plitzner
02:51 PM Revision f91b0ef9 (cdmlib-apps): #5448 Remove non-exisiting hybrid category
Patrick Plitzner
02:51 PM Revision b939e4ff (cdmlib-apps): #5448 Import HYB 'nf'
Patrick Plitzner
02:51 PM Revision eac0d277 (cdmlib-apps): #5448 Import rank "SAM"
Patrick Plitzner
02:04 PM Revision b69a714e (cdmlib): #5751 further redo r28776, handle c3p0 via cdmlib-db in persistence
Andreas Müller
02:04 PM Revision 28794 (edit-svn): #5751 further redo r28776, handle c3p0 via cdmlib-db in persistence
Andreas Müller
01:54 PM bug #6025 (New): Remaining open issues for cdmlib-db
In #5751 a new cdmlib module cdmlib-db has been created.
In this ticket you find the remaining issues that still n...
Andreas Müller
01:51 PM Revision 2b813c8a (cdmlib): #5751 further redo r28776, add cdmlib-db to persistence and remote-webapp
Andreas Müller
01:51 PM Revision 28793 (edit-svn): #5751 further redo r28776, add cdmlib-db to persistence and remote-webapp
Andreas Müller
01:20 PM Revision c2566123 (cdmlib): #5751 Partly redo r28776, add c3p0 and mchange to cdmlib-db
* r28776 had been reverted due to problems, try to redo those parts that
do not create problems
Andreas Müller
01:20 PM Revision 28792 (edit-svn): #5751 Partly redo r28776, add c3p0 and mchange to cdmlib-db
* r28776 had been reverted due to problems, try to redo those parts that
do not create problems
Andreas Müller

07/29/2016

08:01 PM feature request #5088 (Feedback): Redirect automatically to according page when search result has exactly one matching item
As this is now required also by others (e.g. Cuba) we should start implementing as configurable feature Andreas Müller
03:41 PM bug #6023: configuration problems with maven-antrun-plugin
see branch **jdk18-compatibility** Andreas Kohlbecker
02:49 PM bug #6023: configuration problems with maven-antrun-plugin
This problem is related to
[using iajc with java 1.8 JDK — Comparator cannot be resolved to a type](http://stacko...
Andreas Kohlbecker
10:46 AM bug #6023 (Closed): configuration problems with maven-antrun-plugin
## Problems
### 1.
Running `mvn clean install` with java 1.8 (oracle) on cdmlib fails in cdmlib-model with
...
Andreas Kohlbecker
03:41 PM Revision c637ed1c (cdmlib): #5751 changing scope of cdmlib-db to compile for testing - this is maybe not really needed
Andreas Kohlbecker
03:41 PM Revision 28791 (edit-svn): #5751 changing scope of cdmlib-db to compile for testing - this is maybe not really needed
Andreas Kohlbecker
03:38 PM Revision 796730a2 (cdmlib): #6023 trying to replace the maven-antrun plugin my the maven-aspectj plugin - does not work:
- compilation fails due to problems with generics Andreas Kohlbecker
03:38 PM Revision 28790 (edit-svn): #6023 trying to replace the maven-antrun plugin my the maven-aspectj plugin - does not work:
- compilation fails due to problems with generics Andreas Kohlbecker
03:36 PM Revision 2c4ee628 (cdmlib): #6023 adding missing dependency spring-context-support for antrun aspectj
Andreas Kohlbecker
03:36 PM Revision 28789 (edit-svn): #6023 adding missing dependency spring-context-support for antrun aspectj
Andreas Kohlbecker
03:32 PM Revision 71890f03 (cdmlib): #6023 fixing broken file location of spring-aspects for aspectj
Andreas Kohlbecker
03:32 PM Revision 28788 (edit-svn): #6023 fixing broken file location of spring-aspects for aspectj
Andreas Kohlbecker
03:26 PM Revision b6196547 (cdmlib): # #5751 mchange-commons-java needs to match the version as defined in the c3p0/pom.xml
- unsure if this is really needed but readded to better conform to pervious setup Andreas Kohlbecker
03:26 PM Revision 28787 (edit-svn): # #5751 mchange-commons-java needs to match the version as defined in the c3p0/pom.xml
- unsure if this is really needed but readded to better conform to pervious setup Andreas Kohlbecker
03:09 PM Revision 83d01838 (cdmlib): Upgrading maven-jetty-plugin to a version compatible to jdk 1.8
Andreas Kohlbecker
03:09 PM Revision 4a551354 (cdmlib): #5751 Further cleanup for cdmlib-db and poms
Andreas Müller
03:09 PM Revision 28786 (edit-svn): Upgrading maven-jetty-plugin to a version compatible to jdk 1.8
Andreas Kohlbecker
03:09 PM Revision 28785 (edit-svn): #5751 Further cleanup for cdmlib-db and poms
Andreas Müller
03:06 PM Revision d2968d5d (cdmlib): #3868 Add nothovar. test
Andreas Müller
03:06 PM Revision 28784 (edit-svn): #3868 Add nothovar. test
Andreas Müller
02:51 PM feature request #5999 (Duplicate): Go directly to taxon page if only 1 result is returned for search
Andreas Müller
01:55 PM Revision 28783 (edit-svn): Upgrading maven-jetty-plugin to a version compatible to jdk 1.8
Andreas Kohlbecker
01:49 PM bug #6024 (Closed): Fix blocking name relationships for replacement names
Andreas Müller
01:04 PM bug #6024: Fix blocking name relationships for replacement names
Use tmp table
~~~ sql
INSERT INTO _tmpBlockName (relId, rsID, bnID, rnID)
SELECT bnrel.id bnrelid, rs.id rsid,...
Andreas Müller
12:17 PM bug #6024: Fix blocking name relationships for replacement names
~~~ sql
SELECT tnb.id rnid, tnb.uuid, tnb.titleCache as replacementName, bn.titleCache as blockingName, rs.titleCach...
Andreas Müller
11:22 AM bug #6024 (Closed): Fix blocking name relationships for replacement names
Find replacement names that do not have a blocking name relationship
~~~ sql
SELECT tnb.id, tnb.uuid, tnb.titleCa...
Andreas Müller

07/28/2016

10:32 PM Revision ccc14670 (taxeditor): #5751 Remove c3p0 dependency
Andreas Müller
10:32 PM Revision 28782 (edit-svn): #5751 Remove c3p0 dependency
Andreas Müller
04:14 PM Revision 28781 (edit-svn): #5751 Remove explicit dependencies to DB drivers by cdmlib-db in poms
Andreas Müller
04:14 PM Revision 28780 (edit-svn): #5751 Further cleanup for cdmlib-db and poms
Andreas Müller
04:04 PM Revision 28779 (edit-svn): #3868 Add nothovar. test
Andreas Müller
04:02 PM Revision 0515d9fc (cdmlib): #5751 Adaptions to cdmlib poms to replace explicit drivers by cdmlib-db
... Replace explicit DB drivers versioning from cdmlib-parent pom
Forgot to add in previous merge
Andreas Müller
04:02 PM Revision 28778 (edit-svn): #5751 Adaptions to cdmlib poms to replace explicit drivers by cdmlib-db
... Replace explicit DB drivers versioning from cdmlib-parent pom
Forgot to add in previous merge
Andreas Müller
03:50 PM Revision 1c56dd72 (taxeditor): #5751 Remove explicit dependencies to DB drivers by cdmlib-db in poms
Andreas Müller
03:33 PM Revision 9824b51b (cdm-server): #5751 Remove explicit dependencies to DB drivers by cdmlib-db in CDM
Server Andreas Müller
03:33 PM Revision 28777 (edit-svn): #5751 Remove explicit dependencies to DB drivers by cdmlib-db in CDM
Server Andreas Müller
03:23 PM Revision 6b693bbc (cdmlib): #5751 Adaptions to cdmlib poms to replace explicit drivers by cdmlib-db
* Add c3po and mchange-commons-java to cdmlib-db
* Replace explicit DB drivers from cdmlib-persistence.pom by cdmlib...
Andreas Müller
03:23 PM Revision 28776 (edit-svn): #5751 Adaptions to cdmlib poms to replace explicit drivers by cdmlib-db
* Add c3po and mchange-commons-java to cdmlib-db
* Replace explicit DB drivers from cdmlib-persistence.pom by cdmlib...
Andreas Müller
12:55 PM Revision 7247a62e (cdmlib-apps): #6000 Use new CASUAL Method instead of deprecated INTRODUCED_ADVENTITIOUS
Andreas Müller
12:55 PM Revision 28775 (edit-svn): #6000 Use new CASUAL Method instead of deprecated INTRODUCED_ADVENTITIOUS
Andreas Müller
12:40 PM Revision 68c7d536 (cdmlib): #6000 fix missing default color
Andreas Müller
12:40 PM Revision 28774 (edit-svn): #6000 fix missing default color
Andreas Müller
10:34 AM feature request #5999 (Rejected): Go directly to taxon page if only 1 result is returned for search
This suggestion has already been discusses in the past, see #5088 and was rejected Andreas Kohlbecker

07/27/2016

05:46 PM Revision 145fc7c6 (cdmlib): #6000 Add static methods and uuids for new PAT terms
Andreas Müller
05:46 PM Revision 28773 (edit-svn): #6000 Add static methods and uuids for new PAT terms
Andreas Müller
05:27 PM Revision 92ef0c45 (cdmlib-apps): Fixing strange dependency problem related to spring-orm version
Andreas Kohlbecker
05:27 PM Revision 28772 (edit-svn): #6000 Add some new PresenceAbsenceTerms from Cyprus and Cuba
* Invasive changed to naturalized invasive (Cyprus, according to Pysek)
* naturalized invasive: presence questionab...
Andreas Müller
05:27 PM Revision 28771 (edit-svn): #6000 Use new CASUAL Method instead of derpeacted INTRODUCED_ADVENTITIOUS
Andreas Müller
05:27 PM Revision 28770 (edit-svn): Fixing strange dependency problem related to spring-orm version
Andreas Kohlbecker
05:13 PM Revision 5044803f (cdmlib): #6000 Add some new PresenceAbsenceTerms from Cyprus and Cuba
* Invasive changed to naturalized invasive (Cyprus, according to Pysek)
* naturalized invasive: presence questionab...
Andreas Müller
05:13 PM Revision 8bec79dd (cdmlib-apps): Initial set of classes for the IAPT import
Andreas Kohlbecker
05:13 PM Revision 28769 (edit-svn): Initial set of classes for the IAPT import
Andreas Kohlbecker
05:09 PM Revision fd5fd2c8 (cdmlib): #6000 Use new CASUAL Method instead of derpeacted INTRODUCED_ADVENTITIOUS
Andreas Müller
01:38 PM Revision cb67ca59 (cdmlib): #6000 Unify some PresenceAbsenceTerms (merge naturalized, rename adventitious -> casual, etc)
Andreas Müller
01:38 PM Revision 28768 (edit-svn): removing build.xml
Andreas Kohlbecker
01:38 PM Revision 28767 (edit-svn): gitignore
Andreas Kohlbecker
01:38 PM Revision 28766 (edit-svn): Fixing repository settings and project group id
Andreas Kohlbecker
01:38 PM Revision 28765 (edit-svn): #6000 Unify some PresenceAbsenceTerms (merge naturalized, rename adventitious -> casual, etc)
Andreas Müller
12:03 PM task #6021: Add 'mention' functionality
Personally I am not so sure if we really need this. Andreas Müller
10:50 AM Revision 90ec6419 (cdmlib-apps): removing build.xml
Andreas Kohlbecker
10:50 AM Revision 2b46bf5b (cdmlib-apps): gitignore
Andreas Kohlbecker
10:50 AM Revision 28764 (edit-svn): removing build.xml
Andreas Kohlbecker
10:50 AM Revision 28763 (edit-svn): gitignore
Andreas Kohlbecker
09:19 AM Revision 1e60fc7c (cdmlib-apps): #5448 Add "distinct" to SQL query as family table contains duplicate
rows Patrick Plitzner
09:19 AM Revision 28762 (edit-svn): #5448 Add "distinct" to SQL query as family table contains duplicate
rows Patrick Plitzner

07/26/2016

05:13 PM Revision 35b4c4a3 (cdmlib-apps): removing build.xml
Andreas Kohlbecker
05:12 PM Revision 8c25844f (cdmlib-apps): gitignore
Andreas Kohlbecker
05:09 PM Revision 19369d9b (cdmlib-apps): Fixing repository settings and project group id
Andreas Kohlbecker
05:09 PM Revision 28761 (edit-svn): Fixing repository settings and project group id
Andreas Kohlbecker
05:09 PM Revision 6ab8444c (cdmlib-apps): Fixing repository settings and project group id
Andreas Kohlbecker
03:53 PM Revision e38554be (taxeditor): line endings
Patrick Plitzner
03:53 PM Revision 28760 (edit-svn): line endings
Patrick Plitzner
03:30 PM Revision 310262a2 (cdmlib-apps): #5488 Improve import of family taxa
- Load families in related object methods Patrick Plitzner
03:30 PM Revision 28759 (edit-svn): #5488 Improve import of family taxa
- Load families in related object methods Patrick Plitzner
12:01 PM task #6022 (New): Target Version select list hardly usable
We have a lot of Versions (formerly Milstoneds on trac), The select list in the issue editor is too long to easily fi... Andreas Kohlbecker
11:57 AM task #6021 (Rejected): Add 'mention' functionality
see
* **https://www.redmine.org/plugins/rm_user_mentions**
* http://www.redmine.org/issues/13919
* http://www.r...
Andreas Kohlbecker
11:45 AM task #6020 (Closed): Consider replacing custom field 'keywords' by redmine_tags
custom issue fields cannot be edited via the bulk edit function.
Maybe the [redmine_tags plugin](https://github.com/...
Andreas Kohlbecker
11:10 AM Revision e1d0ff38 (cdmlib-apps): #5448 Fix hybrid import where specific epithets are not from same genus
Patrick Plitzner
11:10 AM Revision 28758 (edit-svn): #5448 Fix hybrid import where specific epithets are not from same genus
Patrick Plitzner
11:09 AM Revision 04d95229 (cdmlib-apps): #5448 Add family rank
Patrick Plitzner
11:09 AM Revision 28757 (edit-svn): #5448 Add family rank
Patrick Plitzner
11:08 AM task #6004 (Resolved): Fix wiki page Roadmap
I found a solution by making use of the [redmine_wiki_lists plugin](https://www.redmine.org/plugins/redmine_wiki_lis... Andreas Kohlbecker
09:09 AM Revision a02150f9 (cdmlib-apps): #5448 Fix hybrid import where specific epithets are not from same genus
Patrick Plitzner
09:09 AM Revision 28756 (edit-svn): #5448 Fix hybrid import where specific epithets are not from same genus
Patrick Plitzner
09:01 AM Revision cc9d28ec (cdmlib-apps): #5448 Pass rank and nomenclatural code to name parser creation
Patrick Plitzner
09:01 AM Revision 28755 (edit-svn): #5448 Pass rank and nomenclatural code to name parser creation
Patrick Plitzner
08:22 AM task #6006: setup automatic refresh of repositories in Redmine
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> >
> > done for:
> >
> > * edit svn with `/var/svn/edit/hoo...
Andreas Kohlbecker
08:11 AM Revision d4f17a57 (cdmlib-apps): #5448 Import hybrid with more than 2 parents with protected titlecache
Patrick Plitzner
08:11 AM Revision 28754 (edit-svn): #5448 Import hybrid with more than 2 parents with protected titlecache
Patrick Plitzner
08:07 AM Revision 70f3e481 (cdmlib-apps): #5448 Add missing ranks to transformer
Patrick Plitzner
08:07 AM Revision 28753 (edit-svn): #5448 Add missing ranks to transformer
Patrick Plitzner
08:06 AM Revision 28752 (edit-svn): whitespace
Andreas Kohlbecker
08:03 AM Revision 28751 (edit-svn): whitespace
Andreas Kohlbecker
08:01 AM Revision 28750 (edit-svn): whitespace
Andreas Kohlbecker
07:58 AM Revision 28749 (edit-svn): whitespace
Andreas Kohlbecker
07:57 AM Revision 28748 (edit-svn): whitespace
Andreas Kohlbecker

07/25/2016

06:02 PM bug #6019 (Closed): Link to changeset does not work yet
See http://dev.e-taxonomy.eu/redmine/issues/5420 which links to changeset r26712 in the comment from Cherian Andreas Müller
05:03 PM task #6003: Cleanup redmine users
Andreas Kohlbecker wrote:
> > * Maybe we should set Email notification for all locked users to "No events". I have d...
Andreas Kohlbecker
04:56 PM task #6003: Cleanup redmine users
Andreas Müller wrote:
> Open issues:
>
> * Are the following users required?
> * trac (id = 10; author of 114 w...
Andreas Kohlbecker
04:28 PM task #6003 (Resolved): Cleanup redmine users
Open issues:
* Are the following users required?
* trac (id = 10; author of 114 wiki_contents and wiki_content_v...
Andreas Müller
04:15 PM task #6003: Cleanup redmine users
I tested and updated all existing users with the following queries. Delete duplicates and set inactive users to locke... Andreas Müller
09:51 AM task #6003 (Closed): Cleanup redmine users
1. find users which are associated with tickets as *onwer*, *assignee*, etc
`select distinct u.* from issues i jo...
Andreas Kohlbecker
04:57 PM task #6006: setup automatic refresh of repositories in Redmine
Andreas Kohlbecker wrote:
>
> done for:
>
> * edit svn with `/var/svn/edit/hooks/user-post-commit`
Seems lik...
Andreas Müller
10:34 AM task #6006 (Closed): setup automatic refresh of repositories in Redmine
This needs to be done for all repos in redmine:
http://www.redmine.org/projects/redmine/wiki/HowTo_setup_automat...
Andreas Kohlbecker
04:43 PM Revision 9e2583cf (cdmlib-apps): #5448 Enhance taxon name check
Patrick Plitzner
04:43 PM Revision 28747 (edit-svn): #5448 Enhance taxon name check
Patrick Plitzner
04:42 PM Revision e3cf774c (cdmlib-apps): #5448 Fix import of families
Patrick Plitzner
04:42 PM Revision 28746 (edit-svn): #5448 Fix import of families
Patrick Plitzner
03:17 PM feature request #6016 (Rejected): ICN rules in cdm validation framework implemented
ICN rules specially relevant the for algae names are to be collected in ticket #6015
The resulting list of rule ar...
Andreas Kohlbecker
03:16 PM Revision 212e328c (taxeditor): missed to commit changes in search manager
Katja Luther
03:16 PM Revision 28745 (edit-svn): missed to commit changes in search manager
Katja Luther
01:36 PM bug #6007: Redmine: Wiki tables are not correctly mapped to new syntax
Andreas Kohlbecker wrote:
> tables seem not (yet) to be supported [https://redmine.org/projects/redmine/wiki/Redmin...
Andreas Kohlbecker
01:33 PM bug #6007: Redmine: Wiki tables are not correctly mapped to new syntax
tables seem not (yet) to be supported [https://redmine.org/projects/redmine/wiki/RedmineTextFormattingMarkdown#Table... Andreas Kohlbecker
01:21 PM bug #6007 (Worksforme): Redmine: Wiki tables are not correctly mapped to new syntax
As an example see http://dev.e-taxonomy.eu/redmine/projects/edit/wiki/TCS Andreas Müller
01:26 PM task #6008 (New): Fix broken UTF-8 characters
Write a rake script to fix broken characters:
â€
pages with broken broken characters:
* http://dev.e-ta...
Andreas Kohlbecker
10:14 AM task #6005 (Rejected): Create subprojects of EDIT platform components
The issues related to platform components which have their own git repository should be managed in a separate subproj... Andreas Kohlbecker
10:05 AM Revision 2f9b50b4 (cdmlib): Improve import report
Patrick Plitzner
10:05 AM Revision 28744 (edit-svn): #5448 change DB table name
Patrick Plitzner
10:05 AM Revision 28743 (edit-svn): #5448 Fix import of hybrids due to merge conflicts
Patrick Plitzner
10:05 AM Revision 28742 (edit-svn): #5448 Fix potential NPEs
Patrick Plitzner
10:05 AM Revision 28741 (edit-svn): Improve import report
Patrick Plitzner
09:54 AM task #6004 (Closed): Fix wiki page Roadmap
The trac query macros which have been used in trac need to be replaced by equivalent functionality in redemine:
Qu...
Andreas Kohlbecker
09:02 AM Revision 51188df7 (taxeditor): add session to bulk editor
Katja Luther
09:02 AM Revision 28740 (edit-svn): add session to bulk editor
Katja Luther
07:31 AM Revision a8474132 (taxeditor): fix check active session
Katja Luther
07:31 AM Revision 28739 (edit-svn): fix check active session
Katja Luther

07/21/2016

09:14 PM Revision 3fac85e9 (cdmlib): #5251 Fix Incorrect taxon source attachments
Patrick Plitzner
09:14 PM Revision 28738 (edit-svn): #5251 Fix Incorrect taxon source attachments
Patrick Plitzner
02:31 PM feature request #5999 (Duplicate): Go directly to taxon page if only 1 result is returned for search
WG: Kann man die (in diem Kontext) unnütze Zwischenseite überspringen, wenn nur ein Treffer da ist?
For lucene s...
Andreas Müller

07/20/2016

10:17 PM bug #5676: Sensu does not show up if no author exists for secundum reference
Another example is "Elephantopus scaber" sensu FC-S & A&S which shows only "A&S" : http://portal.cybertaxonomy.org/f... Andreas Müller
 

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