EDIT

ref #6484 Move enum AssignmentStatus to cdm-persistence

smaller changes in ForSubtreeConfigurator

smaller changes in ForSubtreeConfigurator

remove setSecundum in io package

ref #6730: fix delete of media

ref #6730: first quick fix, to avoid deleting media referenced somewhere else.

fix #6368 rename table and class TaxonNameBase

ref #6527: define default for media deletion

cleanup

use remotingProgressMonitor for setSecundumReferenceForSubtree

ref #6315: minor changes for the implementing setSecundum for subtree in editor

fix #3465 Progressmonitor API and better UpdateResult handling for setSecundumForSubtree

fix #3465 implement setSecundumForSubtree

ref #6190 removing svn property place holder in first line of code

Cleanup and new Rights Factory method

fix #6236 add alphabetic length ordering to name search

fix #6128 include authorship option in taxon and name search

ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship

ref #5974 Remove synonym relationship first compiling implementation in cdmlib

advanced MediaDeletionConfigurator

improve delete configurator for taxa and synonyms

minor

Adjust specimen delete configurator

• when isDeleteChildren is true then also molecular data will be deleted
• specimen descriptions will always be deleted

Add assignmentStatus as parameter to occurrence retrieval in service
method

organizing imports

Remove unused parameters

Extend service methods to retrieve specimens that are determiined as a
taxon name

Add javadoc

fixing cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/FeatureNodeDeletionConfigurator.java

fix #5341 and fixing deletion of specimen

new nodeDeletionConfiguator to fit for taxonnode and feature node deletion

fix #5179 and adapting the tests because the classification argument is needed now

#5012 Add service layer updates for remoting calls from the Bulk Editor

Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoting-4.0

Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NonViralName.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/INameService.java...

minor

Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoting-4.0

Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTermBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Reference.java...

• added option to retrieve indirectly associated specimen
  • added service method to retrieve the completete derivative hierarchy for a given specimen
  • added test

• added significantIdentifer as search parameter to occurrenceService.findByTitle()

• added findOccurrences() and countOccurrences() to service layer
  • added configurator for these methods
  • optimized retrieval with HQL query
  • made use of service method in DerivateSearchView

remove import

ConversationHolderMock : overriding all methods
DeleteConfiguratorBase : now implements serializable

created new service in classificationService

it is a first draft of the createHierarchyService
based on taxonNames and until genus level.

• added isDeleteMolecularData flag to configurator

• commented unused field from SpecimenDeleteConfigurator
  • added TODOs for deletion checking for specimens
  • added emtpy isDeletable() method

• added isDeleteFromIndividualsAssociation and isDeleteFromTypeDesignation to SpecimenDeleteConfigurator
  • implemented deletion for above mentioned flags
  • added more information to delete result when deleting specimens
  • added tests for above mentioned flags...

• added delete configurator to occurence service

adapted tcs rdf and xml import, using apache jena for rdf import
tcs import for caryophylales
minor

update listIncludedTaxa #4045

delete terms

fixing deleting a taxon referenced by any other object is not possible

service adaption for deletion of a selection of taxonnodes

documentation

merging delete functionality into trunk

deletionconfigurator tests and implementations

fixing delete functionality and adding tests

solving #2958 (rename and move TaxonServiceConfigurator)

fixing bug associated with getTaxaByCommonName(); benchmarking taxa by common name hql vs lucene

base class for delete configurator

rename DeletionResult -> DeleteResult & improve TermDeletionConfigurator

added deletion result class and term deletion configurator #2703 and others.

adapt the search to be able to find misapplied names: to include misapplied names use the new configurator attribute doIncludeMisappliedNames

added TaxonDeletionConfigurator and TaxonNodeDeletionConfigurator

improved "move synonym" (#2578), also adapted constructor of SynonymRelationship to adapt homotypic group of homotypic synonyms.

move NameDeletionConfigurator to config package and add DeleteExceptions

refine findBestMatchingTaxon

minor

Fixes #2372

Corrected the inheritance of service configurators

merge 3.0.2 to trunk

sdd import matches descriptions to existing taxa

merging /branches/cdmlib/SPRINT-Chichorieae1/ to trunk

Search in Taxonomic Editor runs in it's own thread now.

Added setter/getter for TaxonNamePropertyPath

Added setter/getter for TaxonNamePropertyPath

Preparatory work for ticket #1347.

Preparatory work for ticket #1347.

new service methods and some cleaning up in TaxonService

Added comments

additional service methods for new REST service

svn keyword property "Id" added

Merged branches/cdmlib/2.0 changes r5130:5370 into the trunk

Cleanup

Name search functionality for taxonomic editor