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From 09/26/2023 to 10/25/2023

10/25/2023

08:32 PM bug #10402 (Closed): The header of character matrix shows titlecache instead of the label
Andreas Müller
11:34 AM bug #10402 (Resolved): The header of character matrix shows titlecache instead of the label
The header label is now the l10n label of the term for the term language. Please review. Katja Luther
08:16 PM feature request #10364: Implement state modifiers for matrix
Katja Luther wrote in #note-23:
> This is possible but the drop down does not open, so you still have to enter anoth...
Andreas Müller
08:12 PM feature request #10364: Implement state modifiers for matrix
Katja Luther wrote in #note-23:
> Andreas Müller wrote in #note-21:
> > Is there a possibility that if I enter e.g....
Andreas Müller
08:07 PM feature request #10362 (Feedback): Implement noDataStatus in matrix and details view
In details view the no data combo is not yet ordered. Ticket can be closed again when this is fixed. Andreas Müller
08:03 PM feature request #10362 (Closed): Implement noDataStatus in matrix and details view
Works as expected. Andreas Müller
07:53 PM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
We could also offer to show the "New (Fact)" menu immediately now if no dataset exists yet. Selecting it and a featur... Andreas Müller
07:39 PM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
I wonder if using "*" as an indicator was such a good idea. It looks like "unsaved". Maybe we should use another sign... Andreas Müller
07:34 PM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
Andreas Müller wrote in #note-13:
> When moving single facts a new description is created but without checking if it...
Andreas Müller
07:32 PM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
When moving single facts a new description is created but without checking if it should be a default description. Andreas Müller
07:15 PM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
Andreas Müller wrote in #note-11:
> when trying to add a new first description to a taxon I got:
>
> ~~~
> last ...
Andreas Müller
07:07 PM feature request #5973 (Feedback): Implement DescriptionBase.isDefault in TaxEditor
when trying to add a new first description to a taxon I got:
~~~
last remote service : http://localhost:55734/rem...
Andreas Müller
02:51 PM feature request #5973 (Resolved): Implement DescriptionBase.isDefault in TaxEditor
Adapted move operations in a way that moved descriptions never be default descriptions. I think now everything should... Katja Luther
11:38 AM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
Andreas Müller wrote in #note-8:
> >adding isDefault to the first description created
>
> This should be changed ...
Katja Luther
06:55 PM bug #10410 (Closed): Newly created distributions are added to computed description
Works as expected. We can implement some of the other 3 options later in case there is a request for it. Andreas Müller
06:51 PM Revision b64f825a (taxeditor): cleanup
Andreas Müller
06:51 PM Revision 0237b2e7 (taxeditor): fix typo
Andreas Müller
06:34 PM bug #10411 (Feedback): Show subareas of area trees in area selection dialogue for distribution editor
In most cases it works as expected. But loading the subareas does not work correctl. If I seclect e.g. Georgia and a ... Andreas Müller
10:46 AM bug #10411 (Resolved): Show subareas of area trees in area selection dialogue for distribution editor
This is implemented. If a term is checked, which is also available in a tree, this node is checked as well and the ot... Katja Luther
03:33 PM bug #10423: Distribution Editor: Make it possible to remember name in source
mail KL:
Meine erste Idee, wäre es ähnlich wie bei der Quelle zu machen, allerdings würde ich eine Art Warnung (entw...
Katja Luther
01:44 PM bug #10423 (New): Distribution Editor: Make it possible to remember name in source
Mail ERS:
ich habe gerade den Fall, dass ich für ein Taxon einen name in source angeben muss, der von dem akzeptie...
Katja Luther
02:49 PM Revision c0031f82 (cdmlib): ref #5973: handle default descriptions when moving
Katja Luther
11:35 AM feature request #10398 (Resolved): Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
Katja Luther
11:33 AM Revision 62309dc5 (taxeditor): ref #10402: labels in header with l10n
Katja Luther
11:27 AM feature request #10422 (New): Allow different base layers for distribution and occurrence maps
This is overlapping with #10343 (having separate maps for speparate features).
We could e.g. define a list of map ...
Andreas Müller
10:44 AM Revision b386e9de (taxeditor): ref #10411: check for term/node correlation
Katja Luther

10/24/2023

03:24 PM bug #10393: ABCD Import of specimen added to a taxon included in second classification is not the one of the chosen classification
Andreas Müller wrote in #note-10:
> Andreas Müller wrote in #note-8:
> > As KK already reviewed functionality I onl...
Katja Luther
03:07 PM bug #10393: ABCD Import of specimen added to a taxon included in second classification is not the one of the chosen classification
Andreas Müller wrote in #note-8:
> As KK already reviewed functionality I only reviewed code. It looks ok, but is th...
Andreas Müller
02:01 PM bug #10393 (Closed): ABCD Import of specimen added to a taxon included in second classification is not the one of the chosen classification
I don't know anymore why one collection is a set and one is a list. Katja Luther
03:24 PM Revision 9e2520e7 (cdmlib): ref #10393: code cleaning
Katja Luther
02:48 PM Revision b4e190bf (taxeditor): remove doFactualData from second page - continue
Katja Luther
02:36 PM bug #10419 (Closed): Collector title not handled correctly if collector titleCache is protected
This works as expected. Katja Luther
02:30 PM feature request #10420 (Closed): Order exact values in QuantitativeDataFormatter
Works as expected. Katja Luther
02:07 PM feature request #10362 (Resolved): Implement noDataStatus in matrix and details view
if noDataStatus is selected, the status fields are not visible anymore and the noData Status are sorted now. Katja Luther
02:03 PM Revision 394ed648 (taxeditor): fix if classification from abcd config does not exist
Katja Luther
01:59 PM Revision 6b1d642f (taxeditor): remove doFactualData from second page of Cdm-L export wizard
Katja Luther
01:20 PM Revision 8feecded (cdm-dataportal): show statistical values with modifiers
Katja Luther
11:53 AM feature request #10421 (New): Make it impossible to store objects with obligatory fields not set in TaxEditor (or general)
As an example we found StatisticalMeasumentValue without type set, but there are many others.
We need to
* set ...
Andreas Müller
11:49 AM feature request #10364: Implement state modifiers for matrix
I implemented all issues except the open drop down when the dialog opens up, we have to decide whether this is ok for... Katja Luther
11:36 AM feature request #10398 (In Progress): Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
Katja Luther
11:30 AM feature request #10398 (Resolved): Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
Andreas Müller wrote in #note-7:
> Is there a reason why the selection drop box is now beside the label "Link to Tax...
Katja Luther
11:25 AM Revision 07145de7 (taxeditor): ref #10398: layout
Katja Luther
11:12 AM Revision 2698fe00 (taxeditor): ref #10398: layout and labeling - continue
Katja Luther
11:07 AM Revision 2fc2e877 (taxeditor): ref #10398: layout and labeling
Katja Luther
10:51 AM bug #10410 (Resolved): Newly created distributions are added to computed description
Please review. Katja Luther
10:44 AM bug #10415 (Closed): WS to get polytomous keys and specimen called independend of portal configuration
Yes, you are right. The reported WS calls are for mediakey and multi access key. But I would close this ticket becaus... Katja Luther

10/23/2023

03:50 PM Revision 4fbc03f6 (cdmlib): minor
Katja Luther
03:09 PM Revision b9f64884 (cdmlib): ref #10411: add method to get node for term
Katja Luther
02:48 PM Revision 2857f72b (taxeditor): ref #10411: add new composite for area trees
Katja Luther
02:46 PM Revision 1a11364d (cdmlib): add comparator for determinations
Katja Luther
02:07 PM feature request #10364: Implement state modifiers for matrix
Andreas Müller wrote in #note-22:
> Can we enlarge the dialogue such that the English title is always completely vis...
Katja Luther
01:58 PM Revision f1c54035 (taxeditor): ref #10411: terms checked in tree be checked in voc and other way round
Katja Luther
01:12 PM Revision 46c5bb8d (cdmlib): fix that term node d&d
Katja Luther
12:43 PM Revision e66b8855 (cdm-dataportal): adapt test
Katja Luther
12:26 PM Revision 3760fcc8 (cdm-dataportal): fix derivation label and adapt test
Katja Luther
11:38 AM Revision f404ee45 (cdm-dataportal): adapt test to reenabled specimen -continue
Katja Luther
11:05 AM Revision 87bca936 (cdm-dataportal): adapt test to reenabled specimen -continue
Katja Luther
11:01 AM Revision 7240e6c6 (cdm-dataportal): adapt test to collector handling in fieldunit formatter - continue
Katja Luther
10:59 AM Revision 9ff1b091 (cdm-dataportal): adapt test to reenabled specimen
Katja Luther
10:33 AM Revision d513cca4 (cdm-dataportal): adapt test to collector handling in fieldunit formatter
Katja Luther

10/21/2023

12:39 PM Revision 864e7761 (cdm-dataportal): cleanup
Andreas Müller
12:39 PM Revision f8930811 (cdm-dataportal): ref #10419 adapt portal tests to new collector handling in field unit formatter
Andreas Müller
12:32 PM Revision 58f35d36 (cdmlib): ref #10419 adapt DerivedUnitFacadeFieldUnitCacheStrategy collector formatting to FieldUnitDefaultCacheStrategy
Andreas Müller

10/20/2023

04:18 PM task #10414 (Closed): Remove Georgian subdivisions from Euro+Med
Data for Georgian subdivision have been removed. Map issues (remove borders from map) will be handled in #9367 Andreas Müller
02:59 PM feature request #10420: Order exact values in QuantitativeDataFormatter
Should be fixed. Please review. Andreas Müller
02:58 PM feature request #10420 (Resolved): Order exact values in QuantitativeDataFormatter
Applied in changeset commit:cdmlib|a31d48f6f795b96c38e8c233016cf6040199a127. Andreas Müller
02:51 PM feature request #10420 (Closed): Order exact values in QuantitativeDataFormatter
AM:
... auch im Facts View sollte die Reihenfolge angepasst werden.

![](clipboard-202310201450-ncv5y.png)
Andreas Müller
02:58 PM Revision 374285ad (cdmlib): cleanup
Andreas Müller
02:58 PM Revision a31d48f6 (cdmlib): fix #10420 order exact values in QuantitativeDataFormatter
Andreas Müller
02:23 PM Revision ffd0f988 (taxeditor): ref #10364: increase size and other layout issues - continue
Katja Luther
02:19 PM Revision e32a3655 (taxeditor): ref #10364: increase size and other layout issues
Katja Luther
01:43 PM feature request #10364: Implement state modifiers for matrix
Andreas Müller wrote in #note-21:
> Is there a possibility that if I enter e.g. a "b" in the matrix field (which ope...
Katja Luther
12:51 PM bug #10419: Collector title not handled correctly if collector titleCache is protected
This should be fixed. Please review. Andreas Müller
12:48 PM bug #10419 (Resolved): Collector title not handled correctly if collector titleCache is protected
Applied in changeset commit:cdmlib|e00d6685461dce078048b0817c17fb6d955e4f55. Andreas Müller
12:44 PM bug #10419 (Closed): Collector title not handled correctly if collector titleCache is protected
AM:
Grundsätzlich stimmt diese Implementierung nämlich nicht. Wenn wie hier auch der collector title offensichtlic...
Andreas Müller
12:47 PM Revision e00d6685 (cdmlib): fix #10419 fix collector title handling for protected titleCache collectors
Andreas Müller
11:58 AM Revision d8d184a9 (taxeditor): ref #10362: order items in drop down
Katja Luther
11:39 AM Revision cfee2e0f (cdm-dataportal): code cleaning
Katja Luther
11:31 AM bug #10418 (Closed): Thumbnail loading takes very long in taxon search
AM:
ich bin gerade zufällig über folgendes gestolpert:
Wenn ich bei Cichorieae nach Crepis bungei suche, egal o...
Andreas Müller
11:19 AM Revision 5dbe62c5 (cdmlib): cleanup
Andreas Müller
10:34 AM Revision 1d8a2b4d (cdmlib): code cleaning and add test for nomenclatural code
Katja Luther
10:02 AM Revision 406f4866 (cdmlib): cleanup
Andreas Müller

10/19/2023

05:47 PM feature request #10362: Implement noDataStatus in matrix and details view
The list in "No data available" should be ordered alphabetically. Andreas Müller
05:06 PM feature request #10362 (Feedback): Implement noDataStatus in matrix and details view
If I open a field which has already "not applicable" selected, the status is not disabled:
![](clipboard-202310191...
Andreas Müller
02:05 PM feature request #10362 (Resolved): Implement noDataStatus in matrix and details view
The last two topics are implemented, so I think we can set it to resolved. Please review. Katja Luther
02:04 PM feature request #10362: Implement noDataStatus in matrix and details view
Andreas Müller wrote in #note-20:
> When a no-data-available value is selected, the Status label and the delete butt...
Katja Luther
02:01 PM feature request #10362: Implement noDataStatus in matrix and details view
This is implemented
Andreas Müller wrote in #note-21:
> "No Data available" => either do Data->data or available...
Katja Luther
05:45 PM feature request #10398: Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
Is there a reason why the selection drop box is now beside the label "Link to Taxon"? As the label is bold it seems t... Andreas Müller
05:35 PM feature request #10398 (Feedback): Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
I don't kow if all users know what an individuals association is.
Maybe we better use "As Taxon Fact", "As Specimen ...
Andreas Müller
05:20 PM feature request #10364: Implement state modifiers for matrix
Can we enlarge the dialogue such that the English title is always completely visible:
![](clipboard-202310191720-e...
Andreas Müller
05:00 PM feature request #10364: Implement state modifiers for matrix
Is there a possibility that if I enter e.g. a "b" in the matrix field (which opens the dialogue) this b is also enter... Andreas Müller
04:57 PM feature request #10364 (Feedback): Implement state modifiers for matrix
"Modifier and Status" is incorrect -> "Modifier and State".
Also I wonder if we can't put the labels on top of eac...
Andreas Müller
02:06 PM feature request #10364 (Resolved): Implement state modifiers for matrix
The last not working thing is the open drop down when the dialog opens, maybe we should create a new ticket for this ... Katja Luther
05:17 PM bug #10409 (Closed): Default application language should be English
I moved the open issue to #10417. Andreas Müller
01:05 PM bug #10409 (Resolved): Default application language should be English
I set this ticket to resolved because there is no quick solution for the problem of removed config.ini. Therefore we ... Katja Luther
05:16 PM bug #10417: Remember selected application language after TaxEditor update
Maybe this is easier after upgrading TaxEditor to java 11+ (#10046) Andreas Müller
05:14 PM bug #10417 (New): Remember selected application language after TaxEditor update
for details see #10409 Andreas Müller
04:44 PM bug #10394 (Closed): Details page for derived unit only shows categorical data
I tested again with the above link (and adapted data). Works as expected and we can close this ticket. Andreas Müller
03:20 PM bug #10394: Details page for derived unit only shows categorical data
Andreas Müller wrote in #note-17:
> Is the above test publicly available with a link?
This is my local installati...
Katja Luther
03:16 PM bug #10394 (Resolved): Details page for derived unit only shows categorical data
This looks fine now. I added sorting to the list of values. Katja Luther
03:01 PM bug #10394: Details page for derived unit only shows categorical data
Is the above test publicly available with a link? Andreas Müller
03:00 PM bug #10394: Details page for derived unit only shows categorical data
By the way, is there a reason, why the values are not ordered? I would expect it to be wanted behaviour to order them. Andreas Müller
02:59 PM bug #10394: Details page for derived unit only shows categorical data
Should be fixed. Can you test again? Andreas Müller
02:36 PM bug #10394: Details page for derived unit only shows categorical data
I think this does not work as it should:
![](Screenshot 2023-10-19 143531.png)
The prior implementation was:
![](S...
Katja Luther
02:14 PM bug #10394: Details page for derived unit only shows categorical data
Done. Please review code adaptation. If correct we can close the ticket as functionality works as expected. Andreas Müller
02:07 PM bug #10394: Details page for derived unit only shows categorical data
I will adapt the code Andreas Müller
01:24 PM bug #10394: Details page for derived unit only shows categorical data
Also the parameter naming is strange. The List<BigDecimal> is called "float values". Maybe we can correct this, too. Andreas Müller
01:22 PM bug #10394: Details page for derived unit only shows categorical data
OK, for the above link it seems to work as there are also int values. However, to me it is unclear if the if statemen... Andreas Müller
01:19 PM bug #10394: Details page for derived unit only shows categorical data
... or add a test showing that the result is correct for integer values. Andreas Müller
01:16 PM bug #10394 (Feedback): Details page for derived unit only shows categorical data
Andreas Müller
01:15 PM bug #10394: Details page for derived unit only shows categorical data
There is an *explicit* unlikely argument warning in the code:
![](clipboard-202310191315-haqx8.png)
Can you ple...
Andreas Müller
01:12 PM bug #10394: Details page for derived unit only shows categorical data
A null check is not needed if calling HibernateProxyHelper.deproxy(). I removed it in code. Andreas Müller
03:49 PM bug #10393 (Feedback): ABCD Import of specimen added to a taxon included in second classification is not the one of the chosen classification
As KK already reviewed functionality I only reviewed code. It looks ok, but is there a reason why there is still comm... Andreas Müller
03:49 PM Revision 69a964a3 (cdmlib): minor
Andreas Müller
03:45 PM Revision 49922fca (cdmlib): ref #10393 code cleanup
Andreas Müller
03:32 PM Revision afbdbb45 (cdmlib): cleanup
Andreas Müller
03:22 PM Revision 50614802 (cdmlib): cleanup indentation
Andreas Müller
03:22 PM Revision 001b9d78 (cdmlib): cleanup
Andreas Müller
03:15 PM Revision e4b9fbcd (cdmlib): ref #10394: order the quantitative data
Katja Luther
02:58 PM Revision f1753aed (cdmlib): ref #10394 cleanup code after fix (cont.)
Andreas Müller
02:13 PM Revision bac6de6e (cdmlib): cleanup
Andreas Müller
02:13 PM Revision 93ff1cd3 (cdmlib): ref #10394 cleanup code after fix
Andreas Müller
01:16 PM bug #10410: Newly created distributions are added to computed description
New descriptions are set to default if no default description exists and if distribution editor creates new descripti... Katja Luther
01:11 PM Revision d5cf212e (cdmlib): ref #10394 remove null check for HibernateProxyHelper.deproxy
Andreas Müller
01:01 PM bug #10415: WS to get polytomous keys and specimen called independend of portal configuration
Apart from the above issue the implementation seems to be correct and the 2 WS calls for keys and specimen are remove... Andreas Müller
12:36 PM bug #10415: WS to get polytomous keys and specimen called independend of portal configuration
I could not find any /mediaKey or /multiAccessKey entry in the edit-production todays apache logfiles. So I do not kn... Andreas Müller
12:02 PM bug #10415 (Feedback): WS to get polytomous keys and specimen called independend of portal configuration
The original trigger for this ticket was flora of mexico reporting many many calls of /cdmserver/cdm_flora_mexico/med... Andreas Müller
08:43 AM feature request #10387 (Closed): Show transliteration of common name in dataportal
This works now as expected. Andreas Müller

10/18/2023

10:44 PM feature request #10387: Show transliteration of common name in dataportal
NaK:
was haltet Ihr davon:
Αλλο όνομα [Allo ónoma], Greek
Мя́тлик одноле́тний [Myátlik odnolétniy], Russia...
Andreas Müller
03:59 PM feature request #10387: Show transliteration of common name in dataportal
Andreas Müller wrote in #note-4:
> It does not yet work for E+M which uses CommonNameDto. I added transliteration to...
Andreas Müller
03:38 PM feature request #10387: Show transliteration of common name in dataportal
AM:
... Eine erste Implementierung haben wir gerade gemacht, z.B. https://test.e-taxonomy.eu/dataportal/preview/cy...
Andreas Müller
03:31 PM feature request #10387: Show transliteration of common name in dataportal
Example for non-dto: https://test.e-taxonomy.eu/dataportal/preview/cyprus/cdm_dataportal/taxon/336a8807-05e1-4922-b5c... Andreas Müller
03:19 PM feature request #10387: Show transliteration of common name in dataportal
It does not yet work for E+M which uses CommonNameDto. I added transliteration to the DTO and the loader. Waiting for... Andreas Müller
10:42 PM Revision 4677e296 (cdm-dataportal): ref #10387 adapt formatting for transliteration to user comments
Andreas Müller
03:55 PM bug #10416 (Closed): In dto taxon page title for autonyms missing subsp. part
Works as expected. Tested on new taxon with https://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/taxo... Andreas Müller
03:17 PM Revision 9d37d3f4 (cdmlib): ref #10385, ref #10387 add transliteration to CommonNameDto
Andreas Müller
01:45 PM bug #10394 (Resolved): Details page for derived unit only shows categorical data
I adapted the QuantitativeDataDescriptionBuilder, an example for review can be find here:
https://test.e-taxonomy.eu...
Katja Luther
01:17 PM task #10414: Remove Georgian subdivisions from Euro+Med
More general deduplication: (also exchange "IS NULL" by " = "
~~~
SELECT dist_id, nameCache, source_id1, source...
Andreas Müller
11:48 AM Revision a5177b9f (cdmlib): ref #10394: fix QuantitativeDataDescriptionBuilder
Katja Luther
10:22 AM bug #10415: WS to get polytomous keys and specimen called independend of portal configuration
Katja Luther wrote in #note-1:
> This is implemented for specimen and polytomous keys, maybe there are other WS, but ...
Andreas Müller
09:06 AM bug #10415 (Resolved): WS to get polytomous keys and specimen called independend of portal configuration
This is implemented for specimen and polytomous keys, maybe there are other WS, but in the course of the new dto impl... Katja Luther
08:46 AM Revision 30dbf308 (cdm-dataportal): fix non-object exception
Katja Luther
08:43 AM Revision 913a4b80 (cdm-dataportal): fix non-object exception
Katja Luther

10/17/2023

06:34 PM Revision 52cf965e (cdmlib): ref #10410: adapt test
Katja Luther
06:06 PM task #10414 (Resolved): Remove Georgian subdivisions from Euro+Med
The automated part of this ticket should be fixed. The remaining issues with multiple distributions with differing st... Andreas Müller
04:59 PM task #10414: Remove Georgian subdivisions from Euro+Med
Deduplicating Euro+Med Import sources:
~~~sql
-- source_id, dist_id, dist_id2 , --, nameCache, taxon, st
-- d...
Andreas Müller
03:07 PM bug #10416 (Resolved): In dto taxon page title for autonyms missing subsp. part
This should be fixed, please review. Katja Luther
03:06 PM bug #10416 (Closed): In dto taxon page title for autonyms missing subsp. part
Katja Luther
03:03 PM Revision e5ec62f0 (taxeditor): ref #10410: add preference and adapt checklist editor
Katja Luther
03:01 PM Revision f1be303f (cdmlib): ref #10410: adapt dto creation
Katja Luther
12:56 PM Revision ca929e29 (taxeditor): ref #5973: newly created desc are default if no other default exists
Katja Luther
12:25 PM Revision 305ec296 (cdmlib): ref #10397: check also for typespecimen
Katja Luther
11:28 AM Revision 8c18567f (cdm-dataportal): ref #10415: do not call PK WS everytime
Katja Luther
10:53 AM bug #10415 (Closed): WS to get polytomous keys and specimen called independend of portal configuration
To know whether the polytomous key tab should be shown, the WS to get the polytomous keys is called and if no PK are ... Katja Luther

10/16/2023

04:21 PM feature request #10398 (Resolved): Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
please review Katja Luther
03:15 PM bug #10409: Default application language should be English
Andreas Müller wrote in #note-9:
> There is still commented code in PreferenceUtil in checkDefaultLanguage() and get...
Katja Luther
03:11 PM feature request #10387 (Resolved): Show transliteration of common name in dataportal
There is a first implementation with {common name}/{transliteration available}. Please review. Katja Luther
03:09 PM Revision caf5c45a (cdm-dataportal): ref #10387: add transliteration to common name in data portal
Katja Luther
12:59 PM Revision 19c32a0c (cdmlib): ref #10397: add check for IndividualsAssociation
Katja Luther
12:48 PM Revision 99373e2e (cdm-dataportal): fix display of autonyms
Katja Luther

10/13/2023

10:51 PM task #10414: Remove Georgian subdivisions from Euro+Med
Excel update statement
~~~
="UPDATE OriginalSourceBase SET sourcedElement_id = " & distId2 & " WHERE id = " & sou...
Andreas Müller
09:53 PM task #10414: Remove Georgian subdivisions from Euro+Med
exact duplicate sources
~~~sql
SELECT source_id FROM (
SELECT osb.id source_id, deb.id dist_id, n.nameCache, de...
Andreas Müller
12:29 PM feature request #10364: Implement state modifiers for matrix
Andreas Müller wrote in #note-15:
> Ahh, ok, so the modifiers work now (and hiding them if not available is also a g...
Katja Luther
12:04 PM Revision 8eca5e6a (taxeditor): ref #10364: set focus to newly created status dropdown
Katja Luther
11:27 AM Revision b2aac79d (taxeditor): ref #10364: label of noData and handling of empty modifier selection
Katja Luther
10:22 AM Revision af62e445 (taxeditor): ref #10364: move add button to the right and refresh after remove line
Katja Luther
09:18 AM Revision ba233e15 (taxeditor): code cleanup
Katja Luther
08:09 AM bug #10409: Default application language should be English
Andreas Müller wrote in #note-10:
> It generally works. After restart the language stays as selected before. After ne...
Katja Luther
07:53 AM Revision 4a2d61fe (cdmlib): ref #10397: revert continue
Katja Luther
07:53 AM Revision 5b289f85 (cdmlib): ref #10397: revert last changes - continue
Katja Luther

10/12/2023

06:14 PM bug #10409: Default application language should be English
It generally works. After restart the language stays as selected before. After new installation the language is Engli... Andreas Müller
06:10 PM bug #10409 (Feedback): Default application language should be English
There is still commented code in PreferenceUtil in checkDefaultLanguage() and getPreferredDefaultLanguage(). Is this ... Andreas Müller
05:56 PM feature request #10364: Implement state modifiers for matrix
Andreas Müller wrote in #note-16:
> >Generally I guess as we need the possibility for multiple lines and for 2 field...
Katja Luther
01:53 PM feature request #10364: Implement state modifiers for matrix
>Generally I guess as we need the possibility for multiple lines and for 2 fields it might be better to put the label... Andreas Müller
01:45 PM feature request #10364: Implement state modifiers for matrix
Ahh, ok, so the modifiers work now (and hiding them if not available is also a good idea).
So it is no regression,...
Andreas Müller
12:42 PM feature request #10364: Implement state modifiers for matrix
Andreas Müller wrote in #note-12:
> I don't understand how to enter a second status with this implementation. As this...
Katja Luther
12:34 PM feature request #10364: Implement state modifiers for matrix
Minor issue: label of the dialogue should be "Enter new value(s)" Andreas Müller
12:32 PM feature request #10364: Implement state modifiers for matrix
I don't understand how to enter a second status with this implementation. As this is a regression compared to the cur... Andreas Müller
05:53 PM Revision 7919b6d3 (taxeditor): ref #10364: add + button to add more than one status
Katja Luther
05:21 PM task #10414: Remove Georgian subdivisions from Euro+Med
Differing status
~~~sql
SELECT deb.id, n.nameCache, deb.area_id, t.titleCache, st.titleCache
FROM DescriptionEle...
Andreas Müller
12:12 PM task #10414 (In Progress): Remove Georgian subdivisions from Euro+Med
Andreas Müller
04:26 PM Revision 29c0da4b (taxeditor): ref #10364: set status row invisible if data unavailable status is
chosen Katja Luther
03:53 PM Revision e53dd7fa (taxeditor): ref #10364: change order of modifier and status in dialogue
Katja Luther
03:48 PM Revision 17447324 (taxeditor): ref #10364: move the label above status and modifier combos
Katja Luther
03:11 PM Revision b7d17f42 (taxeditor): remove termDtocombo from formFactory
Katja Luther
02:57 PM Revision ad9bd5eb (taxeditor): using kindOf for checking of subtype
Katja Luther
02:30 PM Revision fc6f5583 (taxeditor): allow also term vocs of modifier hierarchy
Katja Luther
12:49 PM Revision fec775ec (taxeditor): avoid NPE
Katja Luther
12:29 PM feature request #10362: Implement noDataStatus in matrix and details view
"No Data available" => either do Data->data or available->Available, depending what is more consistent with TaxEditor... Andreas Müller
12:22 PM feature request #10362 (Feedback): Implement noDataStatus in matrix and details view
When a no-data-available value is selected, the Status label and the delete button (and all other components like mod... Andreas Müller
12:24 PM Revision 68af0673 (cdmlib): ref #2975 for label for not interpretable
Andreas Müller
10:39 AM Revision a5431e1c (cdmlib): ref #10397: revert last changes
Katja Luther
08:48 AM Revision 30dc81c7 (cdmlib): ref #10398: adapt test to new configurator attribute
Katja Luther

10/11/2023

04:08 PM task #10414: Remove Georgian subdivisions from Euro+Med
Finding distributions for descriptions/taxa that do have only Georgia (core) data.
~~~sql
SELECT deb.id, t.titleCach...
Andreas Müller
04:06 PM task #10414 (Closed): Remove Georgian subdivisions from Euro+Med
There is no real reason for having Georgia devided into Abkhazia, Adjaria and Georgia(core). So we want to merge thes... Andreas Müller
02:39 PM feature request #10398 (In Progress): Make it configurable in ABCD import if identifications should be imported as determinations or individualAssociations or both
This is implemented now, the default is that only the individual association is created.
The import dialog shows a d...
Katja Luther
02:37 PM Revision 8db46556 (cdmlib): ref #10398: importing specimen/taxon rel depending on configurator
Katja Luther
02:37 PM Revision 274c99ef (taxeditor): ref #10398: make it configurable how the specimen/taxon rel should be
imported Katja Luther
01:52 PM Revision 29b9c348 (taxeditor): ref #10398:adapt to changed configurator attribute name - continue
Katja Luther
01:11 PM Revision 4846088b (taxeditor): ref #10398:adapt to changed configurator attribute name
Katja Luther
01:11 PM Revision 373d931c (cdmlib): ref #10398: smaller changes in SpecimenImportConfigurator
Katja Luther
12:57 PM bug #10411 (In Progress): Show subareas of area trees in area selection dialogue for distribution editor
I think this is already in progress. Andreas Müller
09:52 AM Revision 91ac7897 (taxeditor): ref #10410: adaptions in PreferencesUtil
Katja Luther
09:23 AM Revision be5bb5fd (taxeditor): ref #10410: newly created descriptions set as default for chosen
preference Katja Luther
09:21 AM Revision 6bd16ce6 (taxeditor): ref #10410: adapt TaxEditor to changed preference predicate name
Katja Luther
09:12 AM Revision 6a1ebabc (cdmlib): ref #10397: check for taxon associations
Katja Luther

10/10/2023

03:10 PM Revision 2be734d6 (cdmlib): ref #5973: add new preference predicate for description handling in
distr editor Katja Luther
11:40 AM Revision a0e0acff (cdmlib): fix potential NPE in DistributionAggregation
Andreas Müller
11:40 AM Revision 59bea635 (cdmlib): cleanup
Andreas Müller
10:24 AM bug #10409: Default application language should be English
Andreas Müller wrote in #note-7:
> Andreas Müller wrote in #note-5:
> > Is the associated revision the only one rel...
Katja Luther
09:36 AM bug #10413 (New): In distribution editor it should be possible to add an additional distribution
Currently in distribution editor it is only possible to create one distribution per area and taxon, but sometimes it ... Katja Luther
09:34 AM bug #10412 (New): Better handling of areas with more than one distribution in distribution editor
If there is more than one distribution for an area and a given taxon data are currently not editable in distribution ... Katja Luther

10/09/2023

10:48 PM bug #10409: Default application language should be English
Andreas Müller wrote in #note-5:
> Is the associated revision the only one related to this ticket? I ask because I c...
Andreas Müller
10:45 PM bug #10410 (Feedback): Newly created distributions are added to computed description
This generally works, but if a new description needs to be created this description does not yet get flagged as "defa... Andreas Müller
10:44 PM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
>adding isDefault to the first description created
This should be changed to:
Adding isDefault to a newly created d...
Andreas Müller
05:04 PM Revision e2fac394 (cdmlib-apps): latest changes to Greece image activator
Andreas Müller
03:28 PM feature request #7922: Add other possibilities to save distributions created with the distribution editor
AM: ... hier wurden 3 Lösungen angedacht:
1. ~~Verwendung des default Flags: dieses wurde mit #5875 im CDM implement...
Andreas Müller
11:22 AM feature request #7922: Add other possibilities to save distributions created with the distribution editor
Using the default description for new created distribtion data is implemented now. Also showing all distribution data... Katja Luther
02:22 PM feature request #10364 (Feedback): Implement state modifiers for matrix
Andreas Müller
12:24 PM Revision 9bca8097 (taxeditor): ref #7922: better label for > 1 distribution, adapt to default desc
Katja Luther
11:24 AM Revision 9e90879e (cdmlib): ref #7922: collect all descriptions containing distributions except
computed ones Katja Luther

10/06/2023

01:30 PM bug #10410: Newly created distributions are added to computed description
mail ERS:
Hallo zusammen,
ich versuche mich in diese Argumentation hineinzudenken und bin mir nicht ganz sicher...
Katja Luther
11:43 AM feature request #5973 (In Progress): Implement DescriptionBase.isDefault in TaxEditor
Katja Luther
11:17 AM feature request #5973: Implement DescriptionBase.isDefault in TaxEditor
First implementation available:
* ~~moving the default description always to top (if exists)~~
* ~~adding isDefaul...
Katja Luther
11:12 AM Revision 7fa90a24 (taxeditor): ref #5973: set first description as default
Katja Luther
10:38 AM Revision 0682d2cc (taxeditor): ref #5973: add menu item to set default description, adapt labelprovider
Katja Luther
10:37 AM Revision fad84c5b (cdmlib): ref #5973: use default description for distribution editor
Katja Luther

10/05/2023

06:10 PM bug #10411: Show subareas of area trees in area selection dialogue for distribution editor
Please also check if the tree order is taken from the term tree in case of selecting areas from the tree and having "... Andreas Müller
05:37 PM bug #10411 (Closed): Show subareas of area trees in area selection dialogue for distribution editor
For area trees the subareas are not shown. This was observed in Flora of Georgia:
![](clipboard-202310051737-7sz52...
Andreas Müller
12:40 PM bug #10363 (Feedback): Find a solution for importing all shared preferences in a new eclipse installation
I tested with the latest eclipse version 2023-09-R and importing team preferences from the update site http://netcete... Andreas Müller
12:15 PM bug #10363: Find a solution for importing all shared preferences in a new eclipse installation
The instructions for remote workspace preferences can be found here: https://dev.e-taxonomy.eu/redmine/projects/edit/... Andreas Müller
11:41 AM Revision a1e9f9e7 (taxeditor): ref #5973: revert changes in details
Katja Luther
11:38 AM bug #10410 (Resolved): Newly created distributions are added to computed description
AM:
es ist zwar nicht falsch und auch gut, die computed descriptions auszuschließen, aber das wird im gegebenen Fall...
Andreas Müller
09:39 AM bug #10410: Newly created distributions are added to computed description
This should be fixed. Please review. Katja Luther
08:44 AM bug #10410 (Closed): Newly created distributions are added to computed description
Descriptions created in distribution editor sometimes added to computed description. This should not be possible.
...
Katja Luther
11:33 AM Revision 84e6e6ee (taxeditor): ref #5973: add default checkbox to description details
Katja Luther
11:31 AM bug #10402 (In Progress): The header of character matrix shows titlecache instead of the label
The titlecache should be adapted to changes in representation label but in some cases this might not happen.
For e...
Katja Luther
11:07 AM bug #10394: Details page for derived unit only shows categorical data
Andreas Müller wrote in #note-1:
> Is this a dataportal issue?
Maybe more a cdmlib issue because the data collect...
Katja Luther
11:05 AM feature request #10362 (Resolved): Implement noDataStatus in matrix and details view
The noDataStatus drop down is added to the matrix and the details view.
When a noDataStatus is selected, the value ...
Katja Luther
11:00 AM Revision cf501600 (taxeditor): ref #10362: add NoDataStatus to details view
Katja Luther
10:24 AM feature request #7922: Add other possibilities to save distributions created with the distribution editor
Additional possibility:
* (default) description for all distributions: there is one description flagged as distribut...
Andreas Müller
10:04 AM feature request #10364: Implement state modifiers for matrix
A first implementation for categorical data is available, please have a look whether this is ok.
There is a filter...
Katja Luther
09:39 AM Revision 3314b941 (cdmlib): ref #10410: ignore computed descriptions for distribution editor
Katja Luther

10/04/2023

02:41 PM Revision 0005cc02 (taxeditor): ref #10364: adapt editor to possibility to add language parameter -
continue Katja Luther
02:19 PM Revision 1332db49 (taxeditor): ref #10364: adapt editor to possibility to add language parameter
Katja Luther
02:16 PM Revision f46aed37 (cdmlib): fix error in language handling in termDto
Katja Luther
02:15 PM Revision e8d3d00b (cdmlib): ref #10364: add language parameter for rowWrapper creation
Katja Luther
12:37 PM Revision 79768b91 (cdmlib): ref #10178 add configurator and matching result to name matching
Andreas Müller
12:34 PM Revision 05135c9d (cdmlib): cleanup
Andreas Müller
10:38 AM Revision 780fb316 (taxeditor): adapted manifest
Katja Luther
10:10 AM Revision 52bc8059 (taxeditor): ref #10362: add NoData Enum
Katja Luther
10:08 AM Revision ba3378f6 (taxeditor): ref #10364: continue adding modifiers and noData to matrix
Katja Luther
10:01 AM Revision 231f3745 (taxeditor): adapt imports to moved dtos
Katja Luther
09:42 AM Revision e8be3e00 (cdmlib): adapt to moved dtos
Katja Luther
09:30 AM Revision 5eed3133 (cdmlib): ref #10364: adapt dtos and dto handling to using modifiers
Katja Luther
09:15 AM Revision 31de7e35 (taxeditor): ref #10362: add noDataStatus and modifier drop down to dialog
Katja Luther

10/03/2023

01:58 PM Revision 0e73be42 (cdmlib): clean up
Belen Escobari

09/29/2023

09:35 PM Revision 148a27ca (cdm-server): add ATTR_FORCE_SYSTEM_CONSOLE_ENCODING to war.launch
Andreas Müller
09:35 PM Revision 7183e283 (cdm-server): reformat cdm-webapp.launch
Andreas Müller
09:30 PM Revision a7d1d29b (cdm-server): format cdm-server help.launch, profile.launch, debug.launch and war.launch and adapt log4j->log4j2
Andreas Müller
08:56 PM Revision 507ab6ff (cdmlib): add distributionStatusColors computation as commented code
Andreas Müller
08:55 PM Revision 79230c86 (cdmlib): cleanup
Andreas Müller

09/28/2023

09:18 PM Revision 9c7d1e85 (cdmlib): cleanup
Andreas Müller
09:06 PM Revision 97dbc20a (cdmlib-apps): minor changes to CaseariaIdentifierActivator
Andreas Müller
09:06 PM Revision 2b345f92 (cdmlib-apps): ref #10133, ref #9771 adapt OntologyExportActivator to update configuration
Andreas Müller
09:06 PM Revision 7731f1ed (cdmlib-apps): ref #10324 add synonym filter and other changes for final Georgia import
Andreas Müller
08:35 PM bug #10409: Default application language should be English
Is the associated revision the only one related to this ticket? I ask because I can see there are a couple of more co... Andreas Müller
03:07 PM bug #10409 (Resolved): Default application language should be English
During the start the application gets the preference from config.ini, in product configuration properties can be adde... Katja Luther
11:12 AM bug #10409 (Closed): Default application language should be English
mail ERS:
this brings me to the point that in many cases, the TaxEditor opens in German language (also on my lapto...
Katja Luther
08:26 PM Revision 66840e4b (cdmlib-apps): cleanup
Andreas Müller
08:26 PM Revision 0061aa45 (cdmlib-apps): ref #10378 add Koperski import and export
Andreas Müller
06:38 PM Revision 979845a3 (cdmlib): truncate nameCache if necessary
Andreas Müller
03:10 PM Revision 4984536d (taxeditor): revert changes
Katja Luther
02:57 PM Revision 3065ecf2 (taxeditor): get language preference from config.ini
Katja Luther
02:04 PM Revision bba26b36 (taxeditor): add osgi.nl to config file
Katja Luther
01:14 PM Revision 716501ce (taxeditor): reenable saving of editor laguage in config.ini
Katja Luther
12:46 PM Revision bc82da26 (cdmlib): cleanup
Andreas Müller
12:27 PM feature request #10364: Implement state modifiers for matrix
Please be also aware that modifiers and states should support i18n Andreas Müller
11:30 AM bug #10228: Fields for elevation and date should always be expanded
For protologues it does not work. The small arrow indicates that the part is "open", but the element is not shown. Katja Luther
11:08 AM Revision ce23dc02 (taxeditor): fix default language handling
Katja Luther
10:31 AM Revision 8fcfeb7f (taxeditor): remove storage of default language in config.ini
Katja Luther

09/27/2023

05:31 PM discussion #10408: Workflow support for print publication references
This has been discussed e.g. during the Achyranthoids manuscript creation. Andreas Müller
05:30 PM discussion #10408 (New): Workflow support for print publication references
For print publication we usually need reference lists. These maybe can be created during CDM light export. We need to... Andreas Müller
10:24 AM task #6208 (In Progress): Implement synonymy service responding with DTO
This is more or less implemented by #10222/ #10322 I guess. Andreas Müller
10:09 AM feature request #10406 (New): Feedback button for taxon pages
ERS:
Wir haben die User gefragt, weshalb wir extrem wenig Feedback bekommen, und die Antwort war ziemlich eindeuti...
Andreas Müller

09/26/2023

01:00 PM bug #10214 (Closed): Cache configuration for term cache not correctly initialized in taxeditor
I tested it with an idle editor and after this time terms will be reloaded, terms already reloaded are not loaded aga... Katja Luther
12:18 PM Revision eb5df7ad (taxeditor): fix language handling
Katja Luther
11:22 AM Revision d0806f49 (cdmlib-apps): add CaseariaIdentifierActivator
Andreas Müller
11:13 AM Revision 8283f4ba (cdmlib-apps): cleanup
Andreas Müller
10:05 AM Revision 69b1471b (taxeditor): open protologue as default
Katja Luther
 

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