Revision f476ff86
Added by Andreas Müller over 7 years ago
| cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pilotOutputHtml/PilotOutputDescriptionExporter.java | ||
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/** |
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* Copyright (C) 2007 EDIT |
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* European Distributed Institute of Taxonomy
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* European Distributed Institute of Taxonomy |
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* http://www.e-taxonomy.eu |
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*
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* |
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* The contents of this file are subject to the Mozilla Public License Version 1.1 |
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* See LICENSE.TXT at the top of this package for the full license terms. |
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*/ |
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import java.io.FileOutputStream; |
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import java.io.OutputStreamWriter; |
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import java.io.PrintWriter; |
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import java.util.HashSet; |
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import java.util.List; |
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import java.util.Set; |
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import org.apache.log4j.Logger; |
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import org.springframework.stereotype.Component; |
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import eu.etaxonomy.cdm.io.sdd.out.SDDDataSet; |
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import eu.etaxonomy.cdm.model.agent.AgentBase; |
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import eu.etaxonomy.cdm.model.common.DefinedTermBase; |
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import eu.etaxonomy.cdm.model.common.RelationshipBase; |
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import eu.etaxonomy.cdm.model.name.TaxonNameBase; |
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import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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private String ioName = null; |
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/** |
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*
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* |
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*/ |
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public PilotOutputDescriptionExporter() {
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super(); |
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/** Retrieves data from a CDM DB and serializes them CDM to XML. |
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* Starts with root taxa and traverses the classification to retrieve children taxa, synonyms and relationships. |
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* Taxa that are not part of theclassification are not found. |
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*
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* |
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* @param exImpConfig |
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* @param dbname |
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* @param filename |
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protected void doInvoke(PilotOutputExportState state){
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// protected boolean doInvoke(IExportConfigurator config, |
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// Map<String, MapWrapper<? extends CdmBase>> stores) {
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PilotOutputExportConfigurator sddExpConfig = state.getConfig(); |
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String dbname = sddExpConfig.getSource().getName(); |
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String fileName = sddExpConfig.getDestinationNameString(); |
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} catch (Exception e) {
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logger.error("Marshalling error");
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e.printStackTrace(); |
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}
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} |
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commitTransaction(txStatus); |
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return; |
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} |
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PilotOutputExportConfigurator sddExpConfig = (PilotOutputExportConfigurator)config; |
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final int MAX_ROWS = 50000; |
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int numberOfRows = sddExpConfig.getMaxRows(); |
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// TODO:
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// TODO: |
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//CdmApplicationController appCtr = config.getCdmAppController(false, true); |
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int agentRows = numberOfRows; |
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} |
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} |
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// TODO:
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// TODO: |
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// retrieve taxa and synonyms separately |
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// need correct count for taxa and synonyms |
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// if (taxonBaseRows == 0) { taxonBaseRows = getTaxonService().count(TaxonBase.class); }
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// logger.info("# Synonym: " + taxonBaseRows);
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// dataSet.setSynonyms(new ArrayList<Synonym>()); |
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// dataSet.setSynonyms(getTaxonService().getAllSynonyms(taxonBaseRows, 0)); |
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if (sddExpConfig.isDoRelTaxa() == true) {
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if (relationshipRows == 0) { relationshipRows = MAX_ROWS; }
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logger.info("# Relationships");
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List<RelationshipBase> relationList = getTaxonService().getAllRelationships(relationshipRows, 0); |
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Set<RelationshipBase> relationSet = new HashSet<RelationshipBase>(relationList); |
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sddDataSet.setRelationships(relationSet); |
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} |
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// |
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// if (sddExpConfig.isDoRelTaxa() == true) {
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// if (relationshipRows == 0) { relationshipRows = MAX_ROWS; }
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// logger.info("# Relationships");
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// List<RelationshipBase> relationList = getTaxonService().getAllRelationships(relationshipRows, 0);
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// Set<RelationshipBase> relationSet = new HashSet<RelationshipBase>(relationList);
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// sddDataSet.setRelationships(relationSet);
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// }
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if (sddExpConfig.isDoReferencedEntities() == true) {
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logger.info("# Referenced Entities");
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protected boolean isIgnore(PilotOutputExportState state) {
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return false; |
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} |
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} |
Also available in: Unified diff
ref #5974 Remove synonym relationship first compiling implementation in cdmlib