check for empty excludeUuid list
Minor
Handle AuditEvent hibernate sequence update in CdmUpdater correctly #4716
Adapt log4j.properties to hibernate deprecated logging problem
Change logging error to info
Update to lucene 5.4 and some minor dependency updates
Update dependencies to the latest versions (except for lucene) #4716
fixing problems regarding lucene search after merge - one test still failing
resolving conflicts after merge of ticket_4716 into develop
Add PostGreSQL to Source class and clean up PostgreSQL DatabaseType
Cleanup description generics (related to #5357)
revert the commit of the renamed deletelistener
add null check for delete and minor
minor for #5391
organizing imports
#4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663
Generalize term service method listByTermType()
changes for #4960 and #4959
#4716 IndexDocValue relates issues solved, indexing now without exceptions, most tests in TaxonServiceSearchTest successful
disabling unnecesary component scan
add LIKE to MatchMode #5391
Fix upgrade issues after rebase #4716
Fix issues after rebase #4716
migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716
Adapt cdmlib-persistence to new testing architecture #5370
Upgrade to hibernate 5 with persistence tests running #4716
Fix all compile errors from services to remote (some only preliminary) #4716
Further adapt to new jackson and new lucene version #4716
Fix bug for embeddable classes in AdvancedBeanInitializer #5383
#4313 implementing full stack of methods to expose TaxonNodeAgentRelations via remote controllers
Upgrade to spring 4.2.2, spring-security 4.0.2 and latest hibernate validator #4716 and #4702
#4962 commenting performance measure print-out via System.err
#4962 avoiding bean initialization in getChildNodesAtRank() as much as possible - performance improvement
revert chamges in MatchMode
Fix typo
#4313 relationship type as additinal filter option for TaxonNodeAgentRelation services
Add new service method listDerminationEvents to occurrence service which lists all determination events that contain the given specimen
Check for names and synonymy when checking specimen determinations
Add java doc
Clean up BeanInitNode embeddable issues #5383
#4313 implementing full stack of methods to expose TaxonNodeAgentRelations throught the AgentController with filter options
fixing #4878
Fix associated specimen retrieval for name determination
Extend service methods to retrieve specimens that are determiined as a taxon name
When retrieving associated specimens retrieve all IndividualsAssocations, TypeDesignation, Determinations
added DAO for SingleReads #5200
Return type designations with associated taxa
Fix return type
Revert throwing of exception for invalid property path #5077
Add test to ensure bean initialization works on hibernate proxies #5077
Revert "minor"
This reverts commit 64367d007ba404e037ccc2b6794b46c4f1f321bc.
minor
Fix AdvancedBeanInitializer for envers collections/maps #5077
Throw exceptions in AdvancedBeanInitializer instead of logging only #5077
#5066 Remove unnecessary merge listener
Revert handling treeindex in PreInsert listener #5066.
Treeindex creation works fine until now so we keep it where it is.
Rename CdmPreDataChangeObservableListener to CdmPreDataChangeListener
cleanup
fixing getUUIDAndTitleCache for Classification and excluding taxa
Fully remove old vocabulary.byClass methods #3843
Remove listEmpty method from TermVocabularyDao #3843
Add vocabulary list method by term types #3843
Merge branch 'ticket-5066' into develop
Conflicts: cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBase.java cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/PostMergeEntityListener.java
minor clean ups
Adapt listeners and tests to new pre-insert strategy #5066
Add new merge method for root entitites which returns the newly created MergeResult object
Merge branch 'develop' into ticket-5066
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/Language.java cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/CdmListenerIntegrator.java
Add commented code for copying properties
Set transient id for root merge object
resolving conficts in project versions after hotfixrelease
#5288 - avoiding unncessary entitiy loading, using uuid instead in dao methods
Revert "#5288 - avoiding unncessary entitiy loading, using uuid instead in dao methods" since this commit needs to be in a hotfix release.
This reverts commit 2693f7105470815383cdf485355e7fc5ad81ed68.
Add a new merge method in the service base class which allows the option to return the transient object
Allow retrieving objects via ICommonService and UUID (#5160)
#5229 avoiding LIE by autoinitializing the taggedTitle for TaxonBase
Update test database schema to allow null for consensus sequence
Make default constructor public for bean loading
fixing broken pager mechanism for listRankSpecificRootNodes() and improving test coverage
changes for tcs import, fixing taxonnodecomparator, polytomouskey deletion and converting from person to team and team to person
Increase reference titlecache in test DBs
whitespace
Fix UniqueKey issue for sequence ciations
#5067 Updates for remoting derivate hierachy views
Update service layer calls to use uuids, Add property paths to find call for performance tuning
Add to clear DB script
#5066 Replace cdmlib persistence hibernate events listener with pre-[insert/update] for updatedby / createdby updates
Stash updated for bkp
#5056 Refactored 'save' call to return saved entity
Add find- and countByTitle() methods to primer and amplification service
Fix updateSortindex test for TaxonNode javassist objects
#5031 Corrected common service / dao collection methods to use uuid + fieldName
Fix classloading priority of patched hibernate class