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From 01/31/2024 to 02/29/2024

02/28/2024

03:15 PM EDIT Revision 2d98b615 (cdm-dataportal): ref #10322: code cleaning
Katja Luther
03:02 PM EDIT Revision f802103b (cdmlib): ref #10322: add countMethod to polytomouskey controller
Katja Luther
02:59 PM EDIT Revision 0f8b9e89 (cdm-dataportal): ref #10322: code cleaning
Katja Luther
02:38 PM EDIT Revision f3314f13 (cdm-dataportal): ref #10322: revert changes for polytomous key count
Katja Luther
02:29 PM EDIT Revision c9e5a19d (cdm-dataportal): ref #10322: fill parameters for tab selection
Katja Luther
12:32 PM EDIT Revision afc74006 (cdmlib): ref #10322 fix data loading for test
Andreas Müller
11:51 AM EDIT Revision 98445899 (cdmlib): ref #10322 add first test for PortalDtoLoader
Andreas Müller
11:34 AM EDIT Revision d2d5350c (cdmlib): ref #10322, #10474 add OccurrenceInfoDto
Andreas Müller
11:29 AM EDIT Revision fd482b8e (cdmlib): ref #10322 implement withXXX in PortalDtoLoader
Andreas Müller
10:47 AM EDIT Revision 4cb4f5d6 (cdm-dataportal): ref #10472: adapt misapplied name handling to dto
Katja Luther
10:33 AM EDIT Revision ba35c97b (cdm-dataportal): ref #10322: avoid attempt modify property exception - continue
Katja Luther
10:03 AM EDIT bug #10471: Cloning typedesignation does not work
I did split the code so it becomes clear if baseDesignation is null or typeSpecimen is null. Andreas Müller
09:57 AM EDIT bug #10471: Cloning typedesignation does not work
This problem occurred again for MM:
I received thie error when I added duplicated type information for Orobanche a...
Andreas Müller
10:00 AM EDIT Revision 47579a24 (cdmlib): ref #10471 split code for better debugging of NPE
Andreas Müller
09:59 AM EDIT Revision 7cea292e (cdmlib): fix NPE in association check
Katja Luther
09:42 AM EDIT Revision 09b98a26 (cdmlib): cleanup
Andreas Müller
09:09 AM EDIT Revision ff87b7d3 (cdmlib): fix potential NPE in TaxonNodeDto
Andreas Müller

02/27/2024

05:25 PM EDIT Revision 0c9194fd (cdm-dataportal): ref #10322: avoid attempt modify property exception
Katja Luther
05:10 PM EDIT Revision 1596a705 (cdm-dataportal): ref #10322: uri handling
Katja Luther
05:06 PM EDIT Revision 85842358 (cdm-dataportal): ref #10322: fix getting uuid for registrations ws
Katja Luther
04:51 PM EDIT Revision d9cf8f3d (cdm-dataportal): differ between uri implementations
Katja Luther
04:50 PM EDIT Revision afedd287 (cdm-dataportal): ref #10472: use same taxon_dto when switching tabs
Katja Luther
03:26 PM EDIT Revision 77fa7432 (cdm-dataportal): ref #10472: fix undefined properties exceptions - continue
Katja Luther
03:04 PM EDIT Revision 086370a0 (cdm-dataportal): ref #10472: fix undefined properties exceptions - continue
Katja Luther
02:46 PM EDIT Revision 52e246e1 (cdm-dataportal): ref #10472: fix undefined properties exceptions
Katja Luther
02:24 PM EDIT Revision 2dcf7e46 (cdm-dataportal): ref #10472: fix nom ref display in search result
Katja Luther
12:26 PM EDIT bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
Andreas Müller wrote in #note-30:
> Katja Luther wrote in #note-28:
> > Andreas Müller wrote in #note-27:
> > > Ka...
Katja Luther
12:03 PM EDIT bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
Katja Luther wrote in #note-28:
> Andreas Müller wrote in #note-27:
> > Katja Luther wrote in #note-26:
> > > We a...
Andreas Müller
11:57 AM EDIT bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
Andreas Müller wrote in #note-27:
> Katja Luther wrote in #note-26:
> > We also need the taggedFullTitleCache for t...
Katja Luther
11:52 AM EDIT bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
Katja Luther wrote in #note-26:
> We also need the taggedFullTitleCache for the name because for example in euro+med...
Andreas Müller
10:55 AM EDIT bug #7045 (Feedback): portal/classification/{uuid}/childNodesOf/{uuid} service slow
We also need the taggedFullTitleCache for the name because for example in euro+med the search results also contain th... Katja Luther
11:52 AM EDIT Revision f626374e (cdm-dataportal): ref #10472: fix taxon lists in other places
Katja Luther
11:15 AM EDIT Revision ca8cfdf0 (cdm-dataportal): ref #10472: fix media in search result - continue
Katja Luther
11:11 AM EDIT Revision 62776087 (cdm-dataportal): ref #10472: fix media in search result - continue
Katja Luther
10:58 AM EDIT bug #6195: Suppress footnotes in search results page
Can you have a view and review this ticket? Katja Luther
10:57 AM EDIT bug #6195: Suppress footnotes in search results page
Andreas Müller wrote in #note-6:
> I guess we can close this ticket either as duplicate or as (implemented) subticke...
Katja Luther
10:51 AM EDIT Revision a6cff41d (cdm-dataportal): ref #10472: fix media in search result
Katja Luther
10:12 AM EDIT Revision fbba3422 (cdm-dataportal): ref #10472: adapt search result handling - continue
Katja Luther
10:12 AM EDIT Revision 26c97958 (cdm-dataportal): ref #10472: adapt search result handling - continue
Katja Luther
09:37 AM EDIT Revision e05d21c9 (cdmlib): cleanup
Andreas Müller

02/26/2024

05:21 PM EDIT bug #6195 (Resolved): Suppress footnotes in search results page
I guess we can close this ticket either as duplicate or as (implemented) subticket of #10472 ? Andreas Müller
05:19 PM EDIT bug #10472 (In Progress): Improve simple search performance in dataportal
Andreas Müller
02:57 PM EDIT bug #10472: Improve simple search performance in dataportal
Most critical in the remaining is the usage of "search by common name". In larger databases like E+M this search take... Andreas Müller
05:15 PM EDIT bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
Can you please review if it all works and if all fields potentially needed are available? Afterwards please pass the ... Andreas Müller
05:13 PM EDIT bug #4962: improve portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} web service
Andreas Müller wrote in #note-11:
> See also #7045 which indicates that the problem is not fully solved yet.
Not ...
Andreas Müller
04:47 PM EDIT Revision 43deafa1 (cdm-dataportal): cleanup
Andreas Müller
04:23 PM EDIT Revision 5ac46ae7 (cdm-dataportal): ref #10472: adapt search result handling
Katja Luther
04:00 PM EDIT Revision cc12587f (cdm-dataportal): minor
Katja Luther
03:37 PM EDIT Revision 82cad137 (cdmlib): Check dao null exception
Belen Escobari
03:04 PM EDIT Revision 7eaa6eea (cdm-dataportal): minor
Katja Luther
02:49 PM EDIT Revision 32f8320c (cdm-dataportal): revert smaller changes
Katja Luther
12:24 PM EDIT Revision af533c6c (taxeditor): cleanup
Andreas Müller
11:04 AM EDIT Revision 657d1365 (cdmlib): ref #10472 fix remote findDto method
Andreas Müller
09:35 AM EDIT Revision b6210b51 (cdmlib): ref #10472 add taxonFindDto search
Andreas Müller

02/23/2024

06:34 PM EDIT Revision 0241f126 (cdmlib): ref #461, ref #9940, ref #9941 allow preceding type status label (and set as default)
Andreas Müller
05:06 PM EDIT Revision 4ea18bec (cdmlib): revert model changes
Katja Luther
04:54 PM EDIT Revision f266ad42 (cdmlib): replace by DASH_W (cont.)
Andreas Müller
04:52 PM EDIT Revision 341b20c2 (cdmlib): replace by DASH_W
Andreas Müller
04:51 PM EDIT Revision 8477a650 (cdmlib): ref #461, ref #9940, ref #9941 add precedingMainType and accessionNoType params to type designation formatter
Andreas Müller
04:44 PM EDIT feature request #7696: use compact type representations in the synonymy as provided by the typedesignations/byTaxon/{taxon_uuid} service
Andreas Müller wrote in #note-35:
> This will be automatically fixed with the new taxon pages (#10322). Therefore mo...
Andreas Müller
04:37 PM EDIT Revision a0d0da89 (cdmlib): cleanup
Andreas Müller
02:14 PM EDIT Revision 31f930ce (cdmlib): ref #7045 fix test/incorrect object loading introduced for readonly test
Andreas Müller
01:54 PM EDIT Revision 9fa31862 (cdm-dataportal): check if it is string for link->uri
Katja Luther
01:37 PM EDIT bug #7045 (Resolved): portal/classification/{uuid}/childNodesOf/{uuid} service slow
still need to test and cleanup (e.g. use map instead of result class) Andreas Müller
01:18 PM EDIT Revision 7ec75e09 (cdmlib): ref #7045 use real DTOs for loading childNodesOf
Andreas Müller
01:18 PM EDIT Revision 44f34ca7 (cdmlib): cleanup
Andreas Müller
01:18 PM EDIT Revision 06fa9d4e (cdmlib): used defined uuid1
Andreas Müller
01:18 PM EDIT Revision 4c525123 (cdmlib): remove unused property path
Andreas Müller
01:18 PM EDIT Revision 09cb2994 (cdmlib): #7045 move createNodeDtos to result class
Andreas Müller
01:01 PM EDIT bug #10472: Improve simple search performance in dataportal
Andreas Müller wrote in #note-10:
> Katja Luther wrote in #note-8:
> > Do we need registration informations in sear...
Katja Luther
12:47 PM EDIT bug #10472: Improve simple search performance in dataportal
Katja Luther wrote in #note-8:
> Do we need registration informations in search result?
I don't think. Definetely...
Andreas Müller
12:30 PM EDIT bug #10472: Improve simple search performance in dataportal
Andreas Müller wrote in #note-5:
> For each synonym there is 1 call to catch the accepted taxon. If this is necessar...
Katja Luther
12:26 PM EDIT bug #10472: Improve simple search performance in dataportal
Do we need registration informations in search result? Katja Luther
12:33 PM EDIT Revision f4d569c4 (cdm-dataportal): ref #10472: avoid aditional ws calls for search result
Katja Luther
12:23 PM EDIT Revision fb6b61b2 (cdm-dataportal): ws call to get taxon not necessary
Katja Luther
11:58 AM EDIT Revision b0af1546 (cdmlib): ref #10472: add Methods to get accTaxonUuid and nom citation
Katja Luther

02/22/2024

01:19 PM EDIT bug #10472: Improve simple search performance in dataportal
Andreas Müller wrote in #note-5:
> For each synonym there is 1 call to catch the accepted taxon. If this is necessar...
Katja Luther

02/21/2024

10:55 AM EDIT Revision fac3e768 (cdmlib): ref #10322, ref #10474 order derivates on short label
Andreas Müller
09:33 AM EDIT Revision e55927c5 (cdm-dataportal): fix handling for PointDto
Katja Luther
09:05 AM EDIT Revision 13844a20 (cdm-dataportal): fix tests
Katja Luther
08:54 AM EDIT Revision d8a751ff (cdmlib): extract SpecimenOrObservationBaseComparator
Andreas Müller
08:49 AM EDIT Revision d3daf0d6 (cdm-dataportal): fix tests
Katja Luther
08:48 AM EDIT Revision f6fb10d0 (cdmlib): update javadoc for SpecimenTypeDesignationStatus
Andreas Müller
08:37 AM EDIT Revision aaab437f (cdmlib): ref #10322, ref #10474 make SpecimenOrObservationBaseDTO.derivatives ordered
Andreas Müller
08:29 AM EDIT Revision 86968337 (cdmlib): cleanup
Andreas Müller

02/20/2024

11:01 PM EDIT task #10239 (Closed): Caucasus databases and portals available
Andreas Müller
10:58 PM EDIT task #10239: Caucasus databases and portals available
AM:
Die Frage nach der Anpassung der UUIDs ist vermutlich schwer zu final zu beantworten. Zumindest für Taxa würd...
Andreas Müller
10:54 PM EDIT task #10239: Caucasus databases and portals available
AM:
derzeit werden ja noch die von E+M genommen. Ist das so gewollt oder soll das mal angepasst werden. Derzeit werd...
Andreas Müller
03:13 PM EDIT feature request #10474: Improve occurrence loading for taxon page
Test page is: https://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/d245083e-3bda-435f-9bb3... Andreas Müller
02:03 PM EDIT Revision 106db4cb (cdm-dataportal): test
Katja Luther
02:00 PM EDIT Revision eae30255 (cdm-dataportal): test
Katja Luther
01:10 PM EDIT Revision 04d55bcb (cdm-dataportal): remove not used variables
Katja Luther
01:02 PM EDIT Revision 6d38a54d (cdm-dataportal): remove renderpath
Katja Luther
12:52 PM EDIT bug #10476: Sources with name in source are not correctly deduplicated in footnotes
I already removed it in 10634f7c6b2e5c64b97ef6d6e324924a43fa8c70, but added it again. Have to check why. Katja Luther
12:38 PM EDIT bug #10476 (New): Sources with name in source are not correctly deduplicated in footnotes
mail NaK:
Und manchmal wird die selbe Referenz zweimal in der Bibliographie angezeigt, hier z.B. https://caryophyl...
Katja Luther
11:29 AM EDIT Revision 3a8afaea (cdm-dataportal): adapt test to date format in table view
Katja Luther
11:15 AM EDIT feature request #10178: Implement fuzzy name matching
Find matching names using a list of names as input: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471... Belen Escobari
11:14 AM EDIT Revision f13cdf40 (cdm-dataportal): adapt test to order in table view - continue
Katja Luther
11:11 AM EDIT Revision df57cc59 (cdm-dataportal): adapt test to order in table view - continue
Katja Luther
11:06 AM EDIT Revision 6f9e58f9 (cdm-dataportal): adapt test to order in table view
Katja Luther
11:00 AM EDIT Revision f0fcd6ba (cdm-dataportal): adapt test to new date format
Katja Luther
10:57 AM EDIT Revision 34319239 (cdm-dataportal): fix isset_not_empty for numericals
Katja Luther
09:43 AM EDIT Revision 7ee39514 (cdm-dataportal): adapt test for tree view for new order - continue
Katja Luther

02/19/2024

02:50 PM EDIT Revision b079122d (cdm-dataportal): adapt test for tree view for new order
Katja Luther
02:49 PM EDIT bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
The relevant service is ClassificationService.listChildNodeDtosOfTaxon() Andreas Müller
02:41 PM EDIT bug #10472 (Discussed): Improve simple search performance in dataportal
Before removing DTOs we should first remove the unnecessary calls and, if needed, adapt the property paths. This shou... Andreas Müller
02:41 PM EDIT Revision 8677482f (cdm-dataportal): adapt portal specimen page (tree view) to changes in dto - continue
Katja Luther
02:21 PM EDIT Revision e29d0d7d (cdm-dataportal): adapt portal specimen page (tree view) to changes in dto - continue
Katja Luther
01:54 PM EDIT Revision 7d5f46ec (cdm-dataportal): adapt portal specimen page to changes in dto - continue
Katja Luther
01:35 PM EDIT Revision 89b0e2e4 (cdmlib): remove unused getTaxaByName method from taxonDao
Andreas Müller
01:34 PM EDIT Revision 803339c3 (cdmlib): some javadoc
Andreas Müller
01:33 PM EDIT Revision 6018dbcf (cdmlib): ref #10322, ref #10474 remove not fully implemented specimen implementation from DTO for now
Andreas Müller
01:00 PM EDIT Revision 1ccdc34f (cdm-dataportal): adapt portal specimen page to changes in dto
Katja Luther
11:53 AM EDIT Revision 731e7eef (cdm-dataportal): adapt portal specimen page to changes in dto
Katja Luther
11:34 AM EDIT Revision eb1a17cd (cdm-dataportal): adapt portal specimen page to changes in dto
Katja Luther

02/18/2024

01:05 AM EDIT bug #10472: Improve simple search performance in dataportal
For each synonym there is 1 call to catch the accepted taxon. If this is necessary at all it should be done in the "f... Andreas Müller

02/17/2024

03:09 PM EDIT bug #10475: Removing names from homotypic group does not always work
The "homotypic synonym group" may also go togehter with the idea of a syn. sec. that is attached to a HG rathre then ... Andreas Müller
03:07 PM EDIT bug #10475: Removing names from homotypic group does not always work
In generally it needs to be discussed if the concept of a HG which is only referenced by name records and where 1 nam... Andreas Müller
02:52 PM EDIT bug #10475: Removing names from homotypic group does not always work
Further issues you have to have in mind is HG handling during reuse of names: this is usually an intended situation, ... Andreas Müller
02:16 PM EDIT bug #10475: Removing names from homotypic group does not always work
AM:
I did some further research on this issue and found some issues.
Generally the problem arises when the hand...
Andreas Müller
01:33 PM EDIT bug #10475: Removing names from homotypic group does not always work
In Casearia at least in 1 (first) case the name that was not used in a synonym was originally in a synonym that was 1... Andreas Müller
01:28 PM EDIT bug #10475: Removing names from homotypic group does not always work
It stil needs to be decided if this is primarily a cdmlib or a TaxEditor ticket. Andreas Müller
01:19 PM EDIT bug #10475 (New): Removing names from homotypic group does not always work
This has been observed in Casearia where some names showed more types then expected. Research showed that these types... Andreas Müller
10:07 AM EDIT Revision 1153770b (cdmlib): ref #10322, ref #10474 use timePeriod instead of gatheringStartDate in all occurrence context
Andreas Müller
08:34 AM EDIT Revision c0cc1fca (cdmlib): ref #10322, ref #10474 fix recordBase handling (cont.)
Andreas Müller
07:57 AM EDIT Revision b176eec8 (cdmlib): ref #10322, ref #10474 fix recordBase handling
Andreas Müller
01:27 AM EDIT Revision 49c827a1 (cdmlib): ref #10322, ref #10474 handle contigFile
Andreas Müller
12:45 AM EDIT Revision 4a56085a (cdmlib): ref #10322, ref #10474 add DnaQualityDTO
Andreas Müller

02/16/2024

11:45 PM EDIT Revision d02a98ec (cdmlib): ref #10322, ref #10474 add addAmplificationResultDTO, SingleReadDTO and PrimerDTO
Andreas Müller
10:10 PM EDIT Revision f38dafb0 (taxeditor): ref #10322, ref #10474 adapt TaxEditor to gatheringStartDate
Andreas Müller
09:37 PM EDIT Revision 5bbb8fa9 (cdmlib): ref #10322, ref #10474 cleanup fieldunit and improve data handling and comparison (cont.)
Andreas Müller
09:18 PM EDIT Revision 442de1ca (cdmlib): ref #10322, ref #10474 cleanup fieldunit and improve data handling and comparison
Andreas Müller
08:32 PM EDIT Revision 92555b77 (cdmlib): cleanup
Andreas Müller
06:46 PM EDIT Revision 2e032176 (cdmlib): ref #10322, ref #10472 further remove model objects, use DerivationEvent and some cleanup
Andreas Müller
05:02 PM EDIT Revision 9c26ef8c (cdmlib): ref #10322, ref #10472 remove defiend terms and OccurrenceType from SpecimenOrObservationBaseDTO
Andreas Müller
04:40 PM EDIT Revision 5a55a49b (cdmlib): ref #10322, ref #10472 remove model objects from specimenDTOs
Andreas Müller
04:39 PM EDIT Revision 289e0c07 (cdmlib): ref #10322 clean specimenDTOs and TaggedEntityReference factory method
Andreas Müller
03:29 PM EDIT bug #10472 (In Progress): Improve simple search performance in dataportal
Which parts of the taxon object are needed? Is it enough to provide a taggedText? What information is needed.
Which ...
Andreas Müller
02:06 PM EDIT bug #10472: Improve simple search performance in dataportal
In editor the search response contains only UuidAndTitleCache objects, the search in dataportal returns complete taxo... Katja Luther
02:18 PM EDIT Revision 7ff28d5b (cdm-vaadin): ref #10322 split TypedEntityReference in data holder and factory class in vaadin
Andreas Müller
02:02 PM EDIT bug #6195: Suppress footnotes in search results page
This is still an issue because the search works with complete taxon objects and the rendering is the same as for the ... Katja Luther
01:57 PM EDIT bug #10473 (Resolved): Problems in facts view for names
This should be fixed, please review. Katja Luther
08:20 AM EDIT bug #10473 (Resolved): Problems in facts view for names
Hallo,
wenn ich das Name Fact Fenster neu aufmache und das Kontext Menu wähle, dann bekomme ich unter New die ganze ...
Katja Luther
01:56 PM EDIT Revision 2dc5281d (taxeditor): ref #10473: fix problems in factual data view for names
Katja
01:40 PM EDIT Revision 87d237c1 (cdmlib): ref #10322 split TypedEntityReference in data holder and factory class and remove deprecated constructor (cont. ||)
Andreas Müller
01:31 PM EDIT Revision a41577c8 (cdmlib): ref #10322 split TypedEntityReference in data holder and factory class and remove deprecated constructor (cont.)
Andreas Müller
01:30 PM EDIT Revision cbfbc584 (cdmlib): ref #10322 split TypedEntityReference in data holder and factory class and remove deprecated constructor
Andreas Müller
12:37 PM EDIT feature request #10474: Improve occurrence loading for taxon page
Joda time does not work with jackson yet:
~~~
Caused by: com.fasterxml.jackson.databind.exc.InvalidDefinitionExce...
Andreas Müller
09:56 AM EDIT feature request #10474 (New): Improve occurrence loading for taxon page
This is strongly related to #10322. There we already split SpecimenOrObservationBaseDTO and subtype DTOs into relativ... Andreas Müller
11:25 AM EDIT Revision 17a1ef03 (cdmlib): cleanup
Andreas Müller
11:24 AM EDIT Revision 6e0f499e (cdmlib): ref #10322 fix missing label for CollectionDTO
Andreas Müller
09:37 AM EDIT Revision c91c553e (cdmlib): ref #10322 cleanup specimen DTOs
Andreas Müller
12:26 AM EDIT Revision 8c138d94 (cdmlib): ref #10322 try to fix derivatives handling
Andreas Müller

02/15/2024

11:12 PM EDIT Revision 24b237a6 (cdmlib): Correct typo in ORCID IdentifierType description
Andreas Müller
11:04 PM EDIT Revision 005d298f (cdmlib): ref #10273 add WfoContentExport classes (still dummy, copied from backbone export)
Andreas Müller
11:02 PM EDIT Revision afbf0990 (cdmlib): cleanup
Andreas Müller
09:41 PM EDIT Revision 7d5fbd5e (cdmlib): reduce logging in CdmModelCacher
Andreas Müller
07:51 PM EDIT task #10236 (Rejected): Import data from caucasus DB to E+M
As it is very unlikely that we will run this import in future and use the data from the database I close this ticket ... Andreas Müller
05:35 PM EDIT Revision 03104578 (cdmlib): ref #9610: adapted io
Katja Luther
04:25 PM EDIT Revision ee8782a5 (cdmlib): ref #9610: adapted tests
Katja Luther
02:42 PM EDIT bug #9610 (In Progress): MediaMetadataFileReader (formerly in CdmImageInfo) loads same image file multiple times
I adapted the MediaInfoFileReader in a way that the imageInfo and the metadata using the same inputStream.
So curr...
Katja Luther
10:01 AM EDIT bug #9610: MediaMetadataFileReader (formerly in CdmImageInfo) loads same image file multiple times
In dataportal getInputStream() is only called twice
But for the editor getInputStream() is called 4 times!!!
The fir...
Katja Luther
02:37 PM EDIT Revision c67c9637 (taxeditor): ref #9610: adapt editor to changes in MediaInfoFileReader
Katja
02:34 PM EDIT Revision 76d156c3 (cdmlib): ref #9610: MediaInfoFileReader should create inputStream only once
Katja Luther
12:13 PM EDIT task #9161 (Rejected): E+M shapefile with Kaukasus regions
The shapefiles are not needed anymore as the areas will not be used in future E+M or Caucasus DBs. See also #9197#not... Andreas Müller
12:09 PM EDIT feature request #9197 (Rejected): Handle caucasus conspectus data in E+M and caucasus portal
As we decided not to handle Conspectus data in E+M in the above described way anymore this ticket can be closed as Re... Andreas Müller
12:00 PM EDIT Revision 262ee0f0 (cdmlib): ref #10271 remove replacing of "wfo-" in WFO Identifiers (according to documentation change)
Andreas Müller
10:35 AM EDIT Revision e1c3d837 (cdmlib): ref #10322 add javadoc for RegistrationDTO and RegistrationWrapperDTO
Andreas Müller
10:35 AM EDIT Revision dce1e156 (cdmlib): Cleanup
Andreas Müller
10:29 AM EDIT bug #10168 (Closed): Name Type designation with restricted select list
Duplicate of #10434 Wolf-Henning Kusber
09:52 AM EDIT bug #10365 (Closed): Selecting NamedArea tree in distribution preference does not work for distribution editor
Adapted the return values, so we can close this ticket. Katja Luther
09:51 AM EDIT Revision d39fc66b (cdmlib): ref #10365: code cleaning
Katja Luther
12:18 AM EDIT bug #10472 (In Progress): Improve simple search performance in dataportal
In the TaxEditor it is much faster. Need to check:
* ~~if the same method is used~~ => no, different method, TaxEd...
Andreas Müller
12:13 AM EDIT feature request #4403: Handle meta data loading/validating of Media in separate thread
Is this still an open issue for TaxEditor Andreas Müller
12:05 AM EDIT bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
Not sure yet if also relevant for portal performance. Andreas Müller

02/14/2024

11:54 PM EDIT feature request #8144: Check if modifiers and modifyingText is handled correctly for description elements in data portals
Remaining issue from last milestone. Andreas Müller
11:26 PM EDIT feature request #10156: Show field unit media in taxon image galleries
As this is related to specimen and media gathering I move it to current milestone. Andreas Müller
11:19 PM EDIT task #10249: Mapping for metadata labels of images in portal
Is this still an open issue or is it fixed with #10440. If not can you leave a message what is still open? Andreas Müller
11:15 PM EDIT feature request #10289: Allow editing urlPattern in IdentifierType in TaxEditor
This should be very fast to implement therefore move it to current milestone. Andreas Müller
11:01 PM EDIT feature request #461: Improve / compact display of types
This is closely related or a duplicate for #9940 and maybe also #7696. Therefore move it to current milestone. Andreas Müller
11:00 PM EDIT task #9940: Handle type category formatting in compact typification strings
This is closely related to switching to the new taxon pages. Therefore move it to current milestone. Andreas Müller
10:58 PM EDIT feature request #7696: use compact type representations in the synonymy as provided by the typedesignations/byTaxon/{taxon_uuid} service
This will be automatically fixed with the new taxon pages (#10322). Therefore move to current milestone. Andreas Müller
10:56 PM EDIT feature request #1872: CICHORIEAE additional text to descriptive data
As KL recently also worked on this issue I move it to the current milestone so we can maybe close it soon. Andreas Müller
10:54 PM EDIT task #4911: improve performance of distributionInfoFor service
The remaining issues here are probably mostly duplicating #9524. Andreas Müller
10:43 PM EDIT bug #7045 (In Progress): portal/classification/{uuid}/childNodesOf/{uuid} service slow
Andreas Müller
10:41 PM EDIT bug #9015: Comparator for Character Matrix creates strange result
Needs to be reviewed and moved to its old milestone. Andreas Müller
10:14 PM EDIT task #10239 (In Progress): Caucasus databases and portals available
Andreas Müller
10:05 PM EDIT bug #9608: UriUtils to use HTTP HEAD requests where possible
As this is related to #9610 can you have a look if this is still open? Andreas Müller
10:04 PM EDIT bug #9610 (Feedback): MediaMetadataFileReader (formerly in CdmImageInfo) loads same image file multiple times
As far as I remember we have worked on this some time ago. Can you please check if you think that this still happens? Andreas Müller
09:58 PM EDIT bug #10223: References for lectotypes should have short references, not full authorship
This might be automatically fixed by implementing #10322 Andreas Müller
09:57 PM EDIT task #10236: Import data from caucasus DB to E+M
Asked ERS+NaK if we can close this ticket as Rejected Andreas Müller
09:48 PM EDIT bug #10365: Selecting NamedArea tree in distribution preference does not work for distribution editor
Can you check the above mail so we can close this ticket soon (also move to according milestone, then) Andreas Müller
09:28 PM EDIT feature request #10351: Geosearch with full taxon tree result, eventually printer friendly
Remove target version as this is a duplicate. Andreas Müller
09:27 PM EDIT feature request #10367: Add citationMicroReference to description of sources in ReferencingObjectsView
This has been fixed in July 23 already so I change target version. Andreas Müller
08:36 PM EDIT Revision 054d0e55 (taxeditor): ref #10322 adapt taxeditor to DTO changes (cont. II)
Andreas Müller
06:24 PM EDIT Revision e0bcc4e4 (taxeditor): ref #10322 adapt taxeditor to DTO changes (cont.)
Andreas Müller
06:15 PM EDIT Revision e70815ab (taxeditor): ref #10322 adapt taxeditor to DTO changes
Andreas Müller
05:58 PM EDIT Revision 98838e7c (cdm-vaadin): ref #10322 adapt vaadin to RegistrationDTO changes
Andreas Müller
05:18 PM EDIT Revision 2607342d (cdmlib): cleanup
Andreas Müller
05:17 PM EDIT Revision 7e42adef (cdmlib): Remove old FeatureDto_.java
Andreas Müller
05:17 PM EDIT Revision 80d1906f (cdmlib): ref #10322 split service DTOs to api DTOs and Loaders for specimen related DTOs; use SpecimenDTO in TaxonPortalDto
Andreas Müller
03:58 PM EDIT Revision 0bcabde1 (cdm-dataportal): ref #10322: avoid error messages - continue
Katja Luther
03:44 PM EDIT Revision 21c726e4 (cdm-dataportal): ref #10322: avoid error messages - continue
Katja Luther
02:48 PM EDIT bug #10471: Cloning typedesignation does not work
This problem appeared after Maryam created a new Typedesignation and a second one using the clone functionality. Afte... Katja Luther
02:29 PM EDIT Revision afbfad1b (cdm-dataportal): ref #10322: avoid error messages - continue
Katja Luther
01:20 PM EDIT bug #10355 (Closed): Caryophyllales Mexico and Caryophyllales Caryophyllales not usable with clean urls
This is fixed by adding it to .htaccess Katja Luther
11:13 AM EDIT Revision 98f10999 (cdm-dataportal): ref #10322: avoid error messages
Katja Luther
09:33 AM EDIT Revision 0ac5bb2d (cdm-dataportal): ref #10322: avoid undefined properties or variables
Katja Luther

02/13/2024

02:42 PM EDIT Revision 7fcd1fe3 (cdm-dataportal): ref #10322: handle description facts
Katja Luther
02:42 PM EDIT Revision 27faaab1 (cdm-dataportal): show messages from dto
Katja Luther
02:42 PM EDIT Revision 0925e765 (cdm-dataportal): fix secundum reference with footnote in dto page
Katja Luther
01:50 PM EDIT Revision ce907050 (cdmlib): ref #10271 handle CURI identifiers separately
Andreas Müller
01:33 PM EDIT Revision def9a5be (cdmlib): add EntityReference for secundum
Katja Luther
10:37 AM EDIT feature request #9982 (Duplicate): Show links for sec references
This seems to be a duplicate for #10127 Katja Luther

02/12/2024

11:38 PM EDIT Revision 404beffb (cdmlib): ref #10271 handle ipni, tropicos and index fungorum identifiers
Andreas Müller
04:18 PM EDIT feature request #10322: Use DTOs for portal taxon page (cont.)
For the error handling I would add a drupal message with the type which comes with the messages of the portal-dto:
!...
Katja Luther
03:08 PM EDIT feature request #10322: Use DTOs for portal taxon page (cont.)
checked whether tabbed page is available for new taxon page -> yes
checked for typedesignations:
created two dummy ...
Katja Luther
02:45 PM EDIT Revision bcf1578a (cdmlib): do not use feature if not contained in feature map
Katja Luther
02:20 PM EDIT Revision 0c7110dd (taxeditor): in bulkeditor remove label title cache in search
Katja Luther

02/07/2024

12:16 PM EDIT Revision 4d1aeb6c (taxeditor): ref #6554: add old dto combo method to formFactory
Katja
11:55 AM EDIT Revision 66b8cde4 (taxeditor): ref #6554: add dto comparator
Katja
11:55 AM EDIT Revision 0db555e2 (taxeditor): ref #6554: avoid ws for rank combo
Katja
09:45 AM EDIT feature request #6554: The details views are newly created with every change of the focus
Patrick Plitzner wrote in #note-4:
> The performance loss is separated in two areas:
>
> 1. SWT/UI rendering
> ...
Katja Luther

02/06/2024

11:36 AM EDIT bug #10471 (New): Cloning typedesignation does not work
mail MM:
I want to duplicate the type information for Limonium ×interjectum in Caryophyllales database.
I added ...
Katja Luther

02/05/2024

08:04 AM EDIT feature request #9500 (Feedback): Allow removing certain distribution status from distribution publication
Currently there is no test with a status tree != null, we should add a test for the status tree. But the code looks g... Katja Luther

02/02/2024

04:34 PM EDIT feature request #8144: Check if modifiers and modifyingText is handled correctly for description elements in data portals
move it to 5.43 for a final check whether everything is covered, if this is the case move it back to 5.42 Katja Luther
04:33 PM EDIT bug #10456 (Closed): Specimen Table view does not show all typedesignations
Type specimen are shown for accepted and all synonyms, so we can close the ticket. Katja Luther
04:27 PM EDIT bug #10440 (Closed): Still some problems with metadata of images in portal
created a follow up ticket and close this ticket Katja Luther
04:26 PM EDIT bug #10470 (New): Improve media metadata preference page
see https://dev.e-taxonomy.eu/redmine/issues/10440#note-42
and the handling if copyright information comes from me...
Katja Luther
04:25 PM EDIT feature request #10448 (Closed): Implement WFO Backbone export in TaxEditor
Katja Luther
04:24 PM EDIT bug #10469 (New): Remember the sourceLinkBaseUrl
see https://dev.e-taxonomy.eu/redmine/issues/10448#note-27
Katja Luther
12:10 PM EDIT bug #10466: Open issues in logfiles
Please check in log files if the error is still in log files. Andreas Müller
10:29 AM EDIT bug #10466 (Resolved): Open issues in logfiles
This should be fixed. Andreas Müller
10:23 AM EDIT Revision a604d4c8 (cdmlib): ref #10424 make getDefaultDescription transient
Andreas Müller
08:30 AM EDIT Revision ba915f71 (taxeditor): adapt master to develop
Katja Luther
01:35 AM EDIT Revision 2624e03d (cdm-server): Merge branch 'release/5.42.0' into develop
jenkins
01:35 AM EDIT Revision eac3830e (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
01:34 AM EDIT Revision 21273cce (cdm-server): updating poms for branch'release/5.42.0' with non-snapshot versions
jenkins
01:34 AM EDIT Revision 978d9659 (cdm-webapp): Merge branch 'release/5.42.0' into develop
jenkins
01:34 AM EDIT Revision 7505e8f4 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
01:34 AM EDIT Revision bec62358 (cdm-webapp): updating poms for branch'release/5.42.0' with non-snapshot versions
jenkins
01:33 AM EDIT Revision fcf16708 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.42.0
jenkins
01:30 AM EDIT Revision 8c9e1d3c (cdm-vaadin): Merge branch 'release/5.42.0' into develop
jenkins
01:30 AM EDIT Revision 95f2b5d6 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
01:30 AM EDIT Revision 37ba28f9 (taxeditor): Merge branch 'release/5.42.0' into develop
jenkins
01:30 AM EDIT Revision ab08477f (taxeditor): Merge branch 'release/5.42.0'
jenkins
01:27 AM EDIT Revision 00dc2caf (cdm-dataportal): Merge branch 'release/5.42.0' into develop
jenkins
01:27 AM EDIT Revision f76ef079 (cdm-vaadin): updating poms for branch'release/5.42.0' with non-snapshot versions
jenkins
01:27 AM EDIT Revision eef7c1af (cdm-dataportal): updating poms for branch'release/5.42.0' with non-snapshot versions
jenkins
01:27 AM EDIT Revision 7cd31ea2 (cdm-vaadin): jenkins bumping cdmlib.version to 5.42.0
jenkins
01:27 AM EDIT Revision bddcc18d (cdm-dataportal): release-preparation: production level css
jenkins
01:26 AM EDIT Revision 59c76d0a (cdmlib): Updating develop poms back to pre merge state
jenkins
01:26 AM EDIT Revision 8e02587a (cdmlib): Merge branch 'master' into develop
jenkins
01:26 AM EDIT Revision 3e5a874d (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
01:26 AM EDIT Revision c0d2b0c9 (cdmlib): Merge branch 'release/5.42.0'
jenkins
01:13 AM EDIT Revision b673dec1 (cdmlib): updating poms for branch'release/5.42.0' with non-snapshot versions
jenkins
12:27 AM EDIT Revision a2380631 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.42.0-SNAPSHOT
jenkins
12:27 AM EDIT Revision b9a49222 (cdm-webapp): updating poms for 5.43.0-SNAPSHOT development
jenkins
12:27 AM EDIT Revision e92684f6 (cdm-webapp): updating poms for 5.42.0 branch with snapshot versions
jenkins
12:26 AM EDIT Revision 3a5944f5 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.43.0-SNAPSHOT
jenkins
12:26 AM EDIT Revision b7726f9c (taxeditor): Updated version in pom / project files to taxeditor version : 5.43.0-SNAPSHOT and cdmlib version : 5.43.0-SNAPSHOT
jenkins
12:26 AM EDIT Revision a31431c6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.42.0 and cdmlib version : 5.42.0
jenkins
12:24 AM EDIT Revision eca7ab70 (cdm-vaadin): jenkins bumping cdmlib.version to 5.42.0-SNAPSHOT
jenkins
12:24 AM EDIT Revision 825ba6b6 (cdm-vaadin): updating poms for 5.43.0-SNAPSHOT development
jenkins
12:24 AM EDIT Revision 133d0dec (cdm-vaadin): updating poms for 5.42.0 branch with snapshot versions
jenkins
12:24 AM EDIT Revision 2e48cdd5 (cdm-vaadin): jenkins bumping cdmlib.version to 5.43.0-SNAPSHOT
jenkins
12:24 AM EDIT Revision cf874b96 (cdm-dataportal): updating poms for 5.43.0-SNAPSHOT development
jenkins
12:24 AM EDIT Revision 4f138c3a (cdm-server): updating poms for 5.43.0-SNAPSHOT development
jenkins
12:20 AM EDIT Revision 098cfa85 (cdmlib): updating poms for 5.43.0-SNAPSHOT development
jenkins
12:18 AM EDIT Revision 896bf130 (taxeditor): cleanu and add _WFO_ to WFO Content export file name
Andreas Müller

02/01/2024

11:40 PM EDIT Revision 9e5f18f8 (taxeditor): cleanup
Andreas Müller
11:12 PM EDIT Revision 89a9b872 (cdmlib): ref #10271 add IPNI normalizeAuthor to ColDP export
Andreas Müller
11:11 PM EDIT Revision 82a98476 (cdmlib): ref #10271 fix protectd titleCache handling in ColDP Export
Andreas Müller
10:50 PM EDIT Revision fda35d40 (cdmlib): ref#10446 normalize to IPNI standard
Andreas Müller
09:27 PM EDIT Revision 23302694 (cdmlib): ref#10446 fix original spelling handling and add test
Andreas Müller
06:15 PM EDIT feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
Katja Luther wrote in #note-30:
> Andreas Müller wrote in #note-29:
> > Deselecting the zip option has no effect.
>
...
Andreas Müller
12:07 PM EDIT feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
Andreas Müller wrote in #note-29:
> Deselecting the zip option has no effect.
Now deselect zip works and if zip is s...
Katja Luther
10:02 AM EDIT feature request #10448: Implement WFO Backbone export in TaxEditor
Deselecting the zip option has no effect. Andreas Müller
01:37 AM EDIT feature request #10448 (Feedback): Implement WFO Backbone export in TaxEditor
Andreas Müller
01:37 AM EDIT feature request #10448: Implement WFO Backbone export in TaxEditor
Can we make the field larger as URLs are usually a bit longer.
This generally works. However, we could try to save...
Andreas Müller
05:50 PM EDIT bug #10440: Still some problems with metadata of images in portal
There is a scrollbar for the table now which is activated after adding a new term, which is good.
But when reducing ...
Andreas Müller
05:44 PM EDIT bug #10440 (Feedback): Still some problems with metadata of images in portal
Is there a reason why there is so much empty space above the add/remove buttons?
![](clipboard-202402011744-hsnvv....
Andreas Müller
01:08 PM EDIT bug #10440 (Closed): Still some problems with metadata of images in portal
Tested again and for cichorieae and cyprus it works as expected. Katja Luther
05:30 PM EDIT Revision ab840749 (cdmlib): ref#10446 fix compile error and orth. var. selection
Andreas Müller
05:12 PM EDIT bug #10468: Image reference want to display a non-existing media specimen in PhycoBank user portal
The output in the portal was correct until now. It seems that the database expect a media item, if the type is a publ... Wolf-Henning Kusber
05:09 PM EDIT bug #10468: Image reference want to display a non-existing media specimen in PhycoBank user portal
We still need to check if this is a formatting (cdmlib) issue or a dataportal issue. But probably it is cdmlib. Andreas Müller
04:23 PM EDIT bug #10468 (New): Image reference want to display a non-existing media specimen in PhycoBank user portal
Display in Vaadin is correct:
Lectotype for: Chlorosphaera antarctica Fritsch (http://phycobank.org/104339)
Souther...
Wolf-Henning Kusber
05:06 PM EDIT Revision 93381f97 (cdmlib): ref#10446 add warning for missing wfo-id for orth.var. etc.
Andreas Müller
03:07 PM EDIT feature request #10446 (Resolved): WFO Backbone export
The base import is implemented. However, we will need a follow up ticket for open issues. Andreas Müller
03:03 PM EDIT feature request #10459 (Closed): Add taxon-specimen association filter for taxon pages
Andreas Müller
11:18 AM EDIT feature request #10459 (Resolved): Add taxon-specimen association filter for taxon pages
Sorry, hopefully everything is correct now. Katja Luther
10:42 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
In "If nothing is selected all related specimen are displayed" please use correct plural for specimen **s** . Andreas Müller
10:39 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Taxon Fact has a dot at the end. Others don't please do consistent. I think in this case it is better without dot. Andreas Müller
10:39 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Katja Luther wrote in #note-15:
> Andreas Müller wrote in #note-6:
> > If possible it should be either CDET or DET,...
Andreas Müller
10:18 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Andreas Müller wrote in #note-7:
> The documentation should use the same labels as in the selection, not as used as ...
Katja Luther
10:18 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Andreas Müller wrote in #note-5:
> The title of the configuration should end with ":" not "."
This is fixed.
Katja Luther
10:17 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Andreas Müller wrote in #note-6:
> If possible it should be either CDET or DET, not both. So selecting 1 should dese...
Katja Luther
09:37 AM EDIT feature request #10459 (Feedback): Add taxon-specimen association filter for taxon pages
The labels are adapted but there are some more open issues starting at #note-5. Can you please implement or leave a m... Andreas Müller
09:23 AM EDIT feature request #10459 (Resolved): Add taxon-specimen association filter for taxon pages
The settings are adapted. Please have a last short look and then we can close this ticket Katja Luther
02:16 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
"If nothing is selected all related specimen are displayed" => it might be discussed if this is really an intuitive b... Andreas Müller
02:15 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Functionality works as expected, so ticket can be closed once the minor above issues are fixed. Andreas Müller
01:55 AM EDIT feature request #10459 (Feedback): Add taxon-specimen association filter for taxon pages
Please use either plural or singular. Currently it is a mix. Andreas Müller
01:54 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
We may think about renaming Ind. Ass. Should we better use "Taxon Fact"? As this is where it is stored. Users using "... Andreas Müller
01:53 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
The documentation should use the same labels as in the selection, not as used as inner variables (this is also an iss... Andreas Müller
01:51 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
If possible it should be either CDET or DET, not both. So selecting 1 should deselect the other one. But only if this... Andreas Müller
01:48 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
The title of the configuration should end with ":" not "." Andreas Müller
01:47 AM EDIT feature request #10459: Add taxon-specimen association filter for taxon pages
Please always provide links to examples to make reviewing easier.
https://test.e-taxonomy.eu/dataportal/preview/cich...
Andreas Müller
02:54 PM EDIT Revision f0b9227b (cdmlib): ref#10446 adapt base url handling in tests (cont.)
Andreas Müller
02:49 PM EDIT Revision d918dea8 (cdmlib): ref #10440: revert add copyright and copyrightNotice to default values
Katja Luther
02:49 PM EDIT Revision 5317996e (cdmlib): ref #10440: handle copyright same as other metadata
Katja Luther
02:15 PM EDIT Revision 41cfa80b (cdmlib): ref#10446 adapt base url handling in tests
Andreas Müller
01:06 PM EDIT Revision e46be992 (cdmlib): ref #10440: add CopyrightNotice to the default values for metadata
Katja Luther
12:05 PM EDIT Revision c14e4ef0 (taxeditor): ref #10448: fix zip handling and better naming for wfo backbone export
Katja
11:34 AM EDIT Revision d69862e3 (cdmlib): ref#10446 add names only handling
Andreas Müller
11:15 AM EDIT Revision c68d93cb (cdm-dataportal): ref #10459: adapt settings text -continue
Katja Luther
11:10 AM EDIT Revision 20d6488a (cdm-dataportal): ref #10459: adapt settings text -continue
Katja Luther
11:09 AM EDIT Revision b02daac5 (cdmlib): ref#10446 warning for missing base url
Andreas Müller
10:55 AM EDIT feature request #9500: Allow removing certain distribution status from distribution publication
I moved open issues to #10467. Can you do a final review and close if appropriate. Andreas Müller
12:17 AM EDIT feature request #9500: Allow removing certain distribution status from distribution publication
Andreas Müller wrote in #note-32:
> The same still needs to be implemented for print publication (CdmLight, CsvNameE...
Andreas Müller
10:51 AM EDIT feature request #10467 (New): Distribution status filter for exports
Copied from #9500
This needs to be implemented in the configurators, export routines and the TaxEditor assistent.
...
Andreas Müller
10:17 AM EDIT Revision c2dba8bd (cdmlib): ref#10446 adapt ref uri handling
Andreas Müller
10:15 AM EDIT Revision 72a5e871 (cdm-dataportal): ref #10459: adapt settings text -continue
Katja Luther
10:03 AM EDIT Revision 56d8697c (cdm-dataportal): ref #10459: adapt settings text -continue
Katja Luther
10:02 AM EDIT bug #10463 (Closed): Disallow changing DB when switching user in TaxEditor
I think we can close it. Katja Luther
09:52 AM EDIT Revision 3036572e (cdmlib): ref#10446 adapt no-wfoid message
Andreas Müller
09:40 AM EDIT bug #10397: Moving a specimen imported via ABCD to a new taxon does not show the specimen on the new taxon page but on the old one
Katja Luther wrote in #note-18:
> Andreas Müller wrote in #note-15:
> > This seems to be mostly implemented as 3 of...
Andreas Müller
09:34 AM EDIT bug #10397 (Closed): Moving a specimen imported via ABCD to a new taxon does not show the specimen on the new taxon page but on the old one
Andreas Müller wrote in #note-15:
> This seems to be mostly implemented as 3 of 4 solutions are implemented. The ope...
Katja Luther
01:15 AM EDIT bug #10397 (Feedback): Moving a specimen imported via ABCD to a new taxon does not show the specimen on the new taxon page but on the old one
This seems to be mostly implemented as 3 of 4 solutions are implemented. The open solutions is maybe not so important... Andreas Müller
09:28 AM EDIT bug #8591 (Closed): Multiple representations problem on setting synonym as basionym
I tried all issues mentioned above but could not reproduce any of them, so I think we can close this ticket. Katja Luther
01:07 AM EDIT bug #8591 (Feedback): Multiple representations problem on setting synonym as basionym
Can you please check how far this is solved. There is the "sync cache before saving" commit which may have solved the... Andreas Müller
09:22 AM EDIT Revision c53f44c0 (cdm-dataportal): ref #10459: adapt settings text
Katja Luther
08:40 AM EDIT Revision 4cbde9ef (cdmlib): ref#10446 fix remarks test for taxon notes feature
Andreas Müller
08:21 AM EDIT Revision 639ba316 (cdmlib): ref#10446 add remarks handling and remove synonyms without wfoId
Andreas Müller
01:27 AM EDIT feature request #8930 (Closed): Publishable objects should show icon if they are unpublished
For now it looks ok and we can close the ticket. Andreas Müller
01:20 AM EDIT bug #10441 (Closed): LIE in logfiles for DefinedTermBase.includes
I copied the open issue to a new ticket: #10466 Andreas Müller
01:19 AM EDIT bug #10466 (Resolved): Open issues in logfiles
copied from #10441
~~~
Caused by: org.hibernate.LazyInitializationException: failed to lazily initialize a colle...
Andreas Müller
01:11 AM EDIT feature request #8144 (In Progress): Check if modifiers and modifyingText is handled correctly for description elements in data portals
This seems to be at least in progress. Andreas Müller
01:09 AM EDIT bug #10456 (Feedback): Specimen Table view does not show all typedesignations
Is this still partly open? If yes, please add an open issues list. Andreas Müller
01:08 AM EDIT bug #10225: MultipleRepresentationException when moving synonym in homotypic group
The reason why this is maybe fixe could be the "sync cache before saving" commit for #8591 Andreas Müller

01/31/2024

11:54 PM EDIT feature request #10330 (Closed): Handle term tree distribution status for distributionInfo in dataportal
So I guess we can close this ticket. Andreas Müller
11:53 PM EDIT feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
This should be fixed now. See #9500#note-34.
The above example works now with removing status "native"
![](cli...
Andreas Müller
02:29 PM EDIT feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
I could now reproduce by using the above (note-17) Abies alba link and removing "native" from the status tree. Again ... Andreas Müller
02:16 PM EDIT feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
Andreas Müller wrote in #note-24:
> Andreas Müller wrote in #note-23:
> > For some reason the maps are not shown if...
Andreas Müller
02:12 PM EDIT feature request #10330: Handle term tree distribution status for distributionInfo in dataportal
Can you add information which taxon you checked and which status you removed? Andreas Müller
11:03 PM EDIT Revision 12ebfd05 (cdmlib): ref #9500, ref #10330 add term tree based test but still use partOf version to be tested as long as it still exists
Andreas Müller
11:02 PM EDIT Revision 8d731303 (cdmlib): javadoc and deprecation
Andreas Müller
10:38 PM EDIT Revision b6889ed7 (cdmlib): ref #9500, ref #10330 add test and handle null parent better
Andreas Müller
09:55 PM EDIT Revision d5d1935e (cdmlib): ref #9500, ref #10330 apply subarea preference rule to all ancestors, not only direct parents
Andreas Müller
09:51 PM EDIT feature request #9500: Allow removing certain distribution status from distribution publication
It did not fully work yet for maps due to issues discussed in #10330.
The reason for this was that the subareaPrefer...
Andreas Müller
09:45 PM EDIT Revision ae92b36b (cdmlib): cleanup
Andreas Müller
06:11 PM EDIT Revision 768bef8f (cdmlib): cleanup
Andreas Müller
02:48 PM EDIT bug #10454 (Closed): Original spelling should not be shown in taxon title
The result looks as expected. So I guess we can close the issue. Andreas Müller
02:16 PM EDIT bug #10454 (Resolved): Original spelling should not be shown in taxon title
This is implemented, please review. I added an original spelling to Abies alba Mill. in EuroMed on test. Katja Luther
02:13 PM EDIT Revision 6a478377 (cdm-dataportal): ref #10454: check for nameInSource tag during title creation
Katja Luther
01:52 PM EDIT feature request #10448 (Resolved): Implement WFO Backbone export in TaxEditor
This is implemented, please review. Katja Luther
11:46 AM EDIT feature request #10448: Implement WFO Backbone export in TaxEditor
We still need 1 more field which is now available in the configurator: sourceLinkBaseUrl Andreas Müller
01:38 PM EDIT Revision c970f339 (cdmlib): avoid LIE
Katja Luther
01:25 PM EDIT Revision 2e4849f9 (taxeditor): ref #10448: add base url text field
Katja
12:56 PM EDIT Revision dc7a637b (taxeditor): ref #10431: revert to restrictive deactivation
Katja
11:16 AM EDIT Revision 35e72e2c (cdmlib): ref #10446 fix fullSampleDataTest
Andreas Müller
10:49 AM EDIT Revision 71831080 (cdmlib): ref #10446 improve logging for missing wfo-ids and others
Andreas Müller
10:20 AM EDIT Revision c2206052 (cdmlib): ref #10446 remove duplicated missing wfo-id warning
Andreas Müller
10:18 AM EDIT Revision 98d189b2 (cdmlib): ref #10446 improve report formatting
Andreas Müller
02:14 AM EDIT Revision 2f98a4aa (cdmlib): ref #10446 fix statusNote i18n handling
Andreas Müller
01:40 AM EDIT Revision bea3a114 (cdmlib): ref #10446 cleanup doc
Andreas Müller
01:37 AM EDIT Revision 3e989f7d (cdmlib): ref #10446 handle excluded for WFO export and others
Andreas Müller
 

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