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b5eda83f
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Andreas Müller
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/**
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c31bb763
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Andreas Müller
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* Copyright (C) 2007 EDIT
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90046bc4
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Andreas Müller
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* European Distributed Institute of Taxonomy
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c31bb763
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Andreas Müller
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* http://www.e-taxonomy.eu
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90046bc4
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Andreas Müller
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*
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c31bb763
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Andreas Müller
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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90046bc4
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Andreas Müller
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b5eda83f
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Andreas Müller
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package eu.etaxonomy.cdm.model.taxon;
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1d36aa54
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Andreas Müller
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import static org.junit.Assert.assertEquals;
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import static org.junit.Assert.assertNotNull;
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import static org.junit.Assert.assertNull;
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import static org.junit.Assert.assertSame;
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b5b4a36c
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Andreas Müller
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import static org.junit.Assert.assertTrue;
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b5eda83f
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Andreas Müller
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import org.apache.log4j.Logger;
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import org.junit.After;
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import org.junit.Before;
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import org.junit.BeforeClass;
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import org.junit.Test;
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ee91bcd9
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ben.clark
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import eu.etaxonomy.cdm.model.common.DefaultTermInitializer;
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b18c6379
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Andreas Müller
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import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
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e6d7b501
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Andreas Müller
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import eu.etaxonomy.cdm.model.name.IBotanicalName;
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d7919b1c
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Andreas Müller
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import eu.etaxonomy.cdm.model.name.IZoologicalName;
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b5eda83f
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Andreas Müller
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import eu.etaxonomy.cdm.model.name.Rank;
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9dc896c9
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Andreas Müller
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import eu.etaxonomy.cdm.model.name.TaxonName;
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Andreas Müller
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import eu.etaxonomy.cdm.model.name.TaxonNameFactory;
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1d36aa54
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Andreas Müller
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import eu.etaxonomy.cdm.model.reference.Reference;
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45528416
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Katja Luther
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
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3fd06fea
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Andreas Müller
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import eu.etaxonomy.cdm.test.unit.EntityTestBase;
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Andreas Müller
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/**
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* @author a.mueller
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*
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*/
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3fd06fea
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Andreas Müller
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public class TaxonBaseTest extends EntityTestBase {
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e67d8e36
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Andreas Müller
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@SuppressWarnings("unused")
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b5eda83f
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Andreas Müller
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private static final Logger logger = Logger.getLogger(TaxonBaseTest.class);
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90046bc4
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Andreas Müller
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private Reference sec;
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d7919b1c
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Andreas Müller
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private IZoologicalName name1;
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e6d7b501
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Andreas Müller
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private IBotanicalName name2;
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b5eda83f
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Andreas Müller
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private Taxon rootT;
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private Taxon taxon1;
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608eada2
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Andreas Müller
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private Synonym synonym1;
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b5eda83f
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Andreas Müller
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private Taxon freeT;
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90046bc4
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Andreas Müller
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b5eda83f
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Andreas Müller
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@BeforeClass
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ee91bcd9
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ben.clark
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public static void setUpBeforeClass() {
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DefaultTermInitializer vocabularyStore = new DefaultTermInitializer();
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vocabularyStore.initialize();
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b5eda83f
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Andreas Müller
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}
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/**
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* @throws java.lang.Exception
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*/
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@Before
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public void setUp() throws Exception {
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e67d8e36
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Andreas Müller
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sec= ReferenceFactory.newBook();
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892efc69
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Andreas Kohlbecker
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sec.setTitleCache("Schoenes saftiges Allg�u", true);
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033fa0b2
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Andreas Müller
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name1 = TaxonNameFactory.NewZoologicalInstance(Rank.SPECIES(),"Panthera",null,"onca",null,null,null,"p.1467", null);
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b18c6379
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Andreas Müller
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HomotypicalGroup homotypicalGroup = HomotypicalGroup.NewInstance();
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fe34a9eb
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Andreas Müller
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name2 = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES(),"Abies",null,"alba",null,null,null,"p.317", homotypicalGroup);
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b5eda83f
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Andreas Müller
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// taxa
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b18c6379
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Andreas Müller
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taxon1 = Taxon.NewInstance(name1,sec);
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synonym1 = Synonym.NewInstance(name2,sec);
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b5eda83f
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Andreas Müller
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freeT = Taxon.NewInstance(null, null);
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}
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/**
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* @throws java.lang.Exception
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*/
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@After
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public void tearDown() throws Exception {
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}
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90046bc4
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Andreas Müller
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b5eda83f
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Andreas Müller
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/**************** TESTS **************************************/
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/**
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* Test method for {@link eu.etaxonomy.cdm.model.taxon.TaxonBase#getName()}.
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*/
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@Test
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public final void testGetName() {
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assertEquals(name1.getTitleCache(), taxon1.getName().getTitleCache());
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assertNull(freeT.getName());
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}
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6f7d91bd
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Andreas Müller
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//
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// /**
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9dc896c9
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Andreas Müller
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// * Test method for {@link eu.etaxonomy.cdm.model.taxon.TaxonBase#setName(eu.etaxonomy.cdm.model.name.TaxonName)}.
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Andreas Müller
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// */
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// @Test
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// public final void testSetName() {
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// assertNull(freeT.getName());
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// freeT.setName(name2);
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// assertNotNull(freeT.getName());
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// assertSame(freeT.getName(), name2);
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// assertTrue(name1.getTaxa().contains(taxon1));
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// assertTrue(name2.getSynonyms().contains(synonym1));
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// }
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b5eda83f
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Andreas Müller
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/**
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* Test method for {@link eu.etaxonomy.cdm.model.taxon.TaxonBase#isDoubtful()}.
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*/
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@Test
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public final void testIsDoubtful() {
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boolean oldValue;
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Andreas Müller
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oldValue = taxon1.isDoubtful();
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taxon1.setDoubtful(!oldValue);
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assertEquals(! oldValue, taxon1.isDoubtful());
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taxon1.setDoubtful(oldValue);
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assertEquals( oldValue, taxon1.isDoubtful());
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}
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/**
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* Test method for {@link eu.etaxonomy.cdm.model.taxon.TaxonBase#setDoubtful(boolean)}.
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*/
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@Test
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public final void testSetDoubtful() {
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//covered by testIsDoubtful
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}
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/**
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* Test method for {@link eu.etaxonomy.cdm.model.taxon.TaxonBase#getSec()}.
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*/
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@Test
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public final void testGetSec() {
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assertEquals(sec.getTitleCache(), taxon1.getSec().getTitleCache());
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assertNull(freeT.getSec());
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}
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/**
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1d36aa54
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Andreas Müller
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* Test method for {@link eu.etaxonomy.cdm.model.taxon.TaxonBase#setSec(eu.etaxonomy.cdm.model.reference.Reference)}.
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b5eda83f
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Andreas Müller
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*/
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@Test
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public final void testSetSec() {
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assertNull(freeT.getSec());
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freeT.setSec(sec);
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assertNotNull(freeT.getSec());
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assertSame(freeT.getSec(), sec);
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}
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90046bc4
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Andreas Müller
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58b9953c
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Katja Luther
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@Test
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90046bc4
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Andreas Müller
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58b9953c
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Katja Luther
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public final void testClone(){
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90046bc4
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Andreas Müller
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9dc896c9
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Andreas Müller
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TaxonName test = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES());
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58b9953c
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Katja Luther
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String genus = "test";
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String infraGenericEpithet = "test";
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test.setGenusOrUninomial(genus);
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test.setInfraGenericEpithet(infraGenericEpithet);
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90046bc4
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Andreas Müller
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Reference secRef = ReferenceFactory.newArticle();
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58b9953c
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Katja Luther
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secRef.setTitle("Test ...");
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freeT.setSec(secRef);
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freeT.setName(test);
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Taxon clone = (Taxon)freeT.clone();
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eefe8728
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Andreas Müller
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assertSame(freeT.getSec(), clone.getSec());
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58b9953c
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Katja Luther
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assertSame(freeT.getName(), clone.getName());
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}
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b5b4a36c
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Andreas Müller
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/*
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* Moved from IdentifiableEntityTest to here due to #922
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*/
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@Test
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public void testCompareTo() {
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db183545
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Andreas Müller
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TaxonName abies = TaxonNameFactory.NewNonViralInstance(Rank.GENUS(), null);
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Andreas Müller
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abies.setNameCache("Abies");
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abies.setTitleCache("Abies", true);
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Reference sec = ReferenceFactory.newArticle();
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sec.setTitle("Abies alba Ref");
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Taxon abiesTaxon = Taxon.NewInstance(abies, sec);
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9dc896c9
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Andreas Müller
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TaxonName abiesMill = TaxonNameFactory.NewNonViralInstance(Rank.GENUS(), null);
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b5b4a36c
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Andreas Müller
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abiesMill.setNameCache("Abies");
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abiesMill.setTitleCache("Abies Mill.", true);
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Taxon abiesMillTaxon = Taxon.NewInstance(abiesMill, sec);
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int result = 0;
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// "Abies" < "Abies Mill."
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result = abies.compareToName(abiesMill);
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assertTrue(result < 0);
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abiesTaxon = abies.getTaxa().iterator().next();
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assertTrue(abiesTaxon.compareToTaxon(abiesTaxon) == 0);
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assertTrue(abiesMillTaxon.compareToTaxon(abiesTaxon) > 0);
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assertTrue(abiesTaxon.compareToTaxon(abiesMillTaxon) < 0);
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}
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b5eda83f
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Andreas Müller
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}
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