Revision e106b9a0
Added by Katja Luther over 14 years ago
| cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/JaxbImport.java | ||
|---|---|---|
| 32 | 32 |
import eu.etaxonomy.cdm.model.common.LanguageStringBase; |
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import eu.etaxonomy.cdm.model.common.ReferencedEntityBase; |
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import eu.etaxonomy.cdm.model.common.TermVocabulary; |
| 35 |
import eu.etaxonomy.cdm.model.common.User; |
|
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import eu.etaxonomy.cdm.model.common.VersionableEntity; |
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import eu.etaxonomy.cdm.model.description.DescriptionBase; |
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import eu.etaxonomy.cdm.model.description.FeatureTree; |
| ... | ... | |
| 114 | 115 |
Collection<TaxonBase> taxonBases; |
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List<? extends AgentBase> agents; |
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List<DefinedTermBase> terms; |
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List<User> users; |
|
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List<ReferenceBase> references; |
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List<TaxonNameBase> taxonomicNames; |
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List<DescriptionBase> descriptions; |
| ... | ... | |
| 141 | 143 |
|
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if ((jaxbImpConfig.isDoTermVocabularies() == true) |
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&& (termVocabularies = dataSet.getTermVocabularies()).size() > 0) {
|
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txStatus = startTransaction(); |
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//txStatus = startTransaction();
|
|
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ret &= saveTermVocabularies(termVocabularies); |
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commitTransaction(txStatus); |
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|
|
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} |
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|
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if ((jaxbImpConfig.isDoTerms() == true) |
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&& (terms = dataSet.getTerms()).size() > 0) {
|
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//txStatus = startTransaction(); |
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ret &= saveTerms(terms); |
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|
|
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//commitTransaction(txStatus); |
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} |
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|
| ... | ... | |
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// ret = false; |
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// } |
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// commitTransaction(txStatus); |
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|
|
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try {
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if (jaxbImpConfig.isDoUser() == true) {
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if ((users = dataSet.getUsers()).size() > 0) {
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logger.error("Agents: " + users.size());
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getUserService().saveAll(users); |
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} |
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} |
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} catch (Exception ex) {
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logger.error("Error saving agents");
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ret = false; |
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} |
|
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|
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//txStatus = startTransaction(); |
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try {
|
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if (jaxbImpConfig.isDoAuthors() == true) {
|
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if ((agents = dataSet.getAgents()).size() > 0) {
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logger.info("Agents: " + agents.size());
|
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logger.error("Agents: " + agents.size());
|
|
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getAgentService().saveAgentAll(agents); |
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|
|
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} |
| 180 | 195 |
} |
| 181 | 196 |
} catch (Exception ex) {
|
| ... | ... | |
| 185 | 200 |
//commitTransaction(txStatus); |
| 186 | 201 |
|
| 187 | 202 |
|
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//txStatus = startTransaction();
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txStatus = startTransaction(); |
|
| 189 | 204 |
try {
|
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if (jaxbImpConfig.getDoReferences() != IImportConfigurator.DO_REFERENCES.NONE) {
|
| 191 | 206 |
if ((references = dataSet.getReferences()).size() > 0) {
|
| 192 | 207 |
logger.info("References: " + references.size());
|
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getReferenceService().saveReferenceAll(references); |
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|
|
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} |
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} |
| 196 | 212 |
} catch (Exception ex) {
|
| ... | ... | |
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if ((taxonomicNames = dataSet.getTaxonomicNames()).size() > 0) {
|
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logger.info("Taxonomic names: " + taxonomicNames.size());
|
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getNameService().saveTaxonNameAll(taxonomicNames); |
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|
|
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} |
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} |
| 211 | 228 |
} catch (Exception ex) {
|
| ... | ... | |
| 221 | 238 |
if ((homotypicalGroups = dataSet.getHomotypicalGroups()).size() > 0) {
|
| 222 | 239 |
logger.info("Homotypical groups: " + homotypicalGroups.size());
|
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getNameService().saveAllHomotypicalGroups(homotypicalGroups); |
| 241 |
|
|
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} |
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} |
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} catch (Exception ex) {
|
| ... | ... | |
| 235 | 253 |
try {
|
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if (jaxbImpConfig.isDoTaxa() == true) {
|
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if ((taxonBases = dataSet.getTaxonBases()).size() > 0) {
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logger.info("Taxon bases: " + taxonBases.size());
|
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logger.error("Taxon bases: " + taxonBases.size());
|
|
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Iterator <TaxonBase> taxBases = taxonBases.iterator(); |
| 240 | 258 |
while (taxBases.hasNext()){
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getTaxonService().save(taxBases.next()); |
|
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getTaxonService().save( taxBases.next());
|
|
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} |
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|
|
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//getTaxonService().saveTaxonAll(taxonBases); |
| 244 | 263 |
} |
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} |
| ... | ... | |
| 255 | 274 |
try {
|
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if (jaxbImpConfig.isDoTypeDesignations() == true) {
|
| 257 | 276 |
if ((typeDesignations = dataSet.getTypeDesignations()).size() > 0) {
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logger.info("Type Designations: " + typeDesignations.size());
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logger.error("Type Designations: " + typeDesignations.size());
|
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getNameService().saveTypeDesignationAll(typeDesignations); |
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|
|
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} |
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} |
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} catch (Exception ex) {
|
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