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/**
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* Copyright (C) 2009 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.api.facade;
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import java.io.FileNotFoundException;
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import org.apache.log4j.Logger;
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import org.junit.Assert;
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import org.junit.Before;
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import org.junit.Test;
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import eu.etaxonomy.cdm.model.agent.Person;
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import eu.etaxonomy.cdm.model.agent.Team;
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import eu.etaxonomy.cdm.model.common.DefinedTerm;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.LanguageString;
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import eu.etaxonomy.cdm.model.common.TimePeriod;
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import eu.etaxonomy.cdm.model.location.Country;
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import eu.etaxonomy.cdm.model.location.NamedArea;
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import eu.etaxonomy.cdm.model.location.Point;
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import eu.etaxonomy.cdm.model.location.ReferenceSystem;
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import eu.etaxonomy.cdm.model.media.Media;
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import eu.etaxonomy.cdm.model.name.Rank;
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import eu.etaxonomy.cdm.model.name.TaxonName;
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import eu.etaxonomy.cdm.model.name.TaxonNameFactory;
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import eu.etaxonomy.cdm.model.occurrence.Collection;
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import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
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import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;
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import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
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import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
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import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
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import eu.etaxonomy.cdm.model.occurrence.PreservationMethod;
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import eu.etaxonomy.cdm.strategy.parser.TimePeriodParser;
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import eu.etaxonomy.cdm.test.integration.CdmIntegrationTest;
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/**
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* @author a.mueller
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* @date 03.06.2010
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*
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*/
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public class DerivedUnitFacadeCacheStrategyTest extends CdmIntegrationTest {
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@SuppressWarnings("unused")
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private static final Logger logger = Logger.getLogger(DerivedUnitFacadeCacheStrategyTest.class);
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DerivedUnit specimen;
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DerivationEvent derivationEvent;
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FieldUnit fieldUnit;
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GatheringEvent gatheringEvent;
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Integer absoluteElevation = 40;
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Integer absoluteElevationError = 2;
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Team collector = Team.NewInstance();
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String collectingMethod = "Collection Method";
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Double distanceToGround = 22.0;
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Double distanceToSurface = 50.0;
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ReferenceSystem referenceSystem = ReferenceSystem.WGS84();
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Point exactLocation = Point.NewInstance(12.3, 10.567, referenceSystem, 22);
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String gatheringEventDescription = "A nice gathering description";
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TimePeriod gatheringPeriod = TimePeriodParser.parseString("03.05.2005");
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String ecology = "sand dunes";
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String plantDescription = "flowers blue";
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String fieldNumber = "5678";
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String fieldNotes = "such a beautiful specimen";
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Person primaryCollector;
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Integer individualCount = 1;
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DefinedTerm lifeStage = DefinedTerm.NewStageInstance("A wonderful stage", "stage", "st");
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DefinedTerm sex = DefinedTerm.NewSexInstance("FemaleMale", "FM", "FM");
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LanguageString locality = LanguageString.NewInstance("Berlin-Dahlem, E side of Englerallee", Language.DEFAULT());
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NamedArea country = Country.GERMANY();
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String exsiccatum = "Greuter, Pl. Dahlem. 456";
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String accessionNumber = "8909756";
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String catalogNumber = "UU879873590";
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String barcode = "B12345678";
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TaxonName taxonName = TaxonNameFactory.NewBotanicalInstance(Rank.GENUS(), "Abies", null, null, null, null, null, null, null);
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String collectorsNumber = "234589913A34";
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Collection collection = Collection.NewInstance();
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PreservationMethod preservationMethod = PreservationMethod.NewInstance(null, "my prservation");
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DerivedUnitFacade specimenFacade;
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DerivedUnit collectionSpecimen;
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GatheringEvent existingGatheringEvent;
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DerivationEvent firstDerivationEvent;
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FieldUnit firstFieldObject;
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Media media1 = Media.NewInstance();
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//****************************** SET UP *****************************************/
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// /**
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// * @throws java.lang.Exception
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// */
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// @BeforeClass
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// public static void setUpBeforeClass() throws Exception {
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// // FIXME maybe this will cause problems in other tests
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// // INDEED !!!! it causes problems thus this is replaced by making this test a CdmIntegrationTest !!!
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// new DefaultTermInitializer().initialize();
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// }
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@Before
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public void setUp() throws Exception {
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specimen = DerivedUnit.NewPreservedSpecimenInstance();
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derivationEvent = DerivationEvent.NewInstance(DerivationEventType.ACCESSIONING());
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specimen.setDerivedFrom(derivationEvent);
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fieldUnit = FieldUnit.NewInstance();
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fieldUnit.addDerivationEvent(derivationEvent);
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gatheringEvent = GatheringEvent.NewInstance();
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fieldUnit.setGatheringEvent(gatheringEvent);
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gatheringEvent.setAbsoluteElevation(absoluteElevation);
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// gatheringEvent.setAbsoluteElevationError(absoluteElevationError);
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gatheringEvent.setActor(collector);
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gatheringEvent.setCollectingMethod(collectingMethod);
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gatheringEvent.setDistanceToGround(distanceToGround);
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gatheringEvent.setDistanceToWaterSurface(distanceToSurface);
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gatheringEvent.setExactLocation(exactLocation);
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gatheringEvent.setDescription(gatheringEventDescription);
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gatheringEvent.setTimeperiod(gatheringPeriod);
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gatheringEvent.setLocality(locality);
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gatheringEvent.setCountry(country);
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fieldUnit.setFieldNumber(fieldNumber);
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fieldUnit.setFieldNotes(fieldNotes);
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fieldUnit.setIndividualCount(individualCount);
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fieldUnit.setSex(sex);
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fieldUnit.setLifeStage(lifeStage);
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primaryCollector = Person.NewTitledInstance("Kilian");
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collector.addTeamMember(primaryCollector);
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Person secondCollector = Person.NewInstance();
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secondCollector.setFirstname("Andreas");
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secondCollector.setLastname("Muller");
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collector.addTeamMember(secondCollector);
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Person thirdCollector = Person.NewTitledInstance("Kohlbecker");
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collector.addTeamMember(thirdCollector);
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fieldUnit.setPrimaryCollector(primaryCollector);
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specimen.setAccessionNumber(accessionNumber);
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specimen.setCatalogNumber(catalogNumber);
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specimen.setBarcode(barcode);
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specimen.setStoredUnder(taxonName);
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specimen.setCollection(collection);
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specimen.setPreservation(preservationMethod);
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specimen.setExsiccatum(exsiccatum);
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specimenFacade = DerivedUnitFacade.NewInstance(specimen);
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//existing specimen with 2 derivation events in line
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collectionSpecimen = DerivedUnit.NewPreservedSpecimenInstance();
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DerivedUnit middleSpecimen = DerivedUnit.NewPreservedSpecimenInstance();
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firstFieldObject = FieldUnit.NewInstance();
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//TODO maybe we should define concrete event types here
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DerivationEvent lastDerivationEvent = DerivationEvent.NewInstance(null);
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DerivationEvent middleDerivationEvent = DerivationEvent.NewInstance(null);
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firstDerivationEvent = DerivationEvent.NewInstance(null);
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collectionSpecimen.setDerivedFrom(lastDerivationEvent);
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lastDerivationEvent.addOriginal(middleSpecimen);
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middleSpecimen.setDerivedFrom(firstDerivationEvent);
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firstDerivationEvent.addOriginal(firstFieldObject);
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existingGatheringEvent = GatheringEvent.NewInstance();
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firstFieldObject.setGatheringEvent(existingGatheringEvent);
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}
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/**
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* Test method for {@link eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeCacheStrategy#getTitleCache(eu.etaxonomy.cdm.model.occurrence.Specimen)}.
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*/
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@Test
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public void testGetTitleCache() {
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String correctCache = "Germany, Berlin-Dahlem, E side of Englerallee, alt. 40 m, 10\u00B034'1.2\"N, 12\u00B018'E (WGS84), sand dunes, 3.5.2005, Kilian 5678, A. Muller & Kohlbecker; Greuter, Pl. Dahlem. 456 (B 8909756); flowers blue.";
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specimenFacade.setEcology(ecology);
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specimenFacade.setPlantDescription(plantDescription);
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collection.setCode("B");
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Assert.assertEquals(correctCache, specimenFacade.getTitleCache());
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}
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/**
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* Test method for {@link eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeCacheStrategy#getTitleCache(eu.etaxonomy.cdm.model.occurrence.Specimen)}.
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*/
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@Test
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public void testGetTitleCacheWithEtAl() {
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String correctCache = "Germany, Berlin-Dahlem, E side of Englerallee, alt. 40 m, 10\u00B034'1.2\"N, 12\u00B018'E (WGS84), sand dunes, 3.5.2005, Kilian 5678, A. Muller, Kohlbecker & al.; Greuter, Pl. Dahlem. 456 (B 8909756); flowers blue.";
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collector.setHasMoreMembers(true);
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specimenFacade.setEcology(ecology);
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specimenFacade.setPlantDescription(plantDescription);
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collection.setCode("B");
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Assert.assertEquals(correctCache, specimenFacade.getTitleCache());
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}
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//#6381
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@Test
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public void testGetTitleCacheAccessionBarcodeCatalogNumber() {
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//Note: Collection Code B might be deduplicated in future
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specimenFacade.setPlantDescription(plantDescription);
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collection.setCode("B");
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String correctCache = "Germany, Berlin-Dahlem, E side of Englerallee, alt. 40 m, 10\u00B034'1.2\"N, 12\u00B018'E (WGS84), 3.5.2005, Kilian 5678, A. Muller & Kohlbecker; Greuter, Pl. Dahlem. 456 (B 8909756); flowers blue.";
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Assert.assertEquals(correctCache, specimenFacade.getTitleCache());
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specimenFacade.setAccessionNumber(null);
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correctCache = "Germany, Berlin-Dahlem, E side of Englerallee, alt. 40 m, 10\u00B034'1.2\"N, 12\u00B018'E (WGS84), 3.5.2005, Kilian 5678, A. Muller & Kohlbecker; Greuter, Pl. Dahlem. 456 (B B12345678); flowers blue.";
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Assert.assertEquals(correctCache, specimenFacade.getTitleCache());
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specimenFacade.setBarcode(null);
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correctCache = "Germany, Berlin-Dahlem, E side of Englerallee, alt. 40 m, 10\u00B034'1.2\"N, 12\u00B018'E (WGS84), 3.5.2005, Kilian 5678, A. Muller & Kohlbecker; Greuter, Pl. Dahlem. 456 (B UU879873590); flowers blue.";
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Assert.assertEquals(correctCache, specimenFacade.getTitleCache());
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}
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@Override
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public void createTestDataSet() throws FileNotFoundException {}
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}
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