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Revision ab4cc1fb

Added by Andreas Müller about 14 years ago

some refactoring in the IO classes

View differences:

cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/erms/ErmsTransformer.java
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import eu.etaxonomy.cdm.common.CdmUtils;


  		




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import eu.etaxonomy.cdm.io.common.mapping.IDbImportTransformer;


  		




  
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import eu.etaxonomy.cdm.io.common.mapping.InputTransformerBase;


  		




  
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import eu.etaxonomy.cdm.io.common.mapping.UndefinedTransformerMethodException;


  		




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import eu.etaxonomy.cdm.model.common.Language;


  		




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import eu.etaxonomy.cdm.model.description.Feature;


  		




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import eu.etaxonomy.cdm.model.name.NameTypeDesignationStatus;


  		




  ......




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 * @created 01.03.2010


  		




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 * @version 1.0


  		




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 */


  		




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public final class ErmsTransformer implements IDbImportTransformer{


  		




  
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public final class ErmsTransformer extends InputTransformerBase implements IDbImportTransformer{


  		




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	private static final Logger logger = Logger.getLogger(ErmsTransformer.class);


  		




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	public static final int SOURCE_USE_ORIGINAL_DESCRIPTION = 1;


  		




  ......




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	public static final int SOURCE_USE_STATUS_SOURCE = 7;


  		




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	public static final int SOURCE_USE_EMENDATION = 8;


  		




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	//language uuids


  		




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	public static final UUID uuidEuropeanMarineWaters = UUID.fromString("47389e42-3b3c-4873-bded-ac030db86462");


  		




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	public static final UUID uuidMediterraneanSea = UUID.fromString("bde8a624-23c4-4ac3-b381-11287f5d656a");


  		




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	public static final UUID uuidWhiteSea = UUID.fromString("bf14bfb6-8925-4696-911c-56d3e90d4491");


  		




  ......




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	public static final UUID uuidTurkishExclusiveEconomicZone = UUID.fromString("3d552e73-2bf5-4f36-8a91-94fbead970e5");


  		




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	public static final UUID uuidDanishExclusiveEconomicZone = UUID.fromString("53d5a8bd-804b-4cbb-b5ad-f47ff6433db0");


  		




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	//feature uuids


  		




  
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	public static final UUID uuidRemark = UUID.fromString("648eab77-8469-4139-bbf4-3fb26ec15864");


  		




  
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	public static final UUID uuidAdditionalinformation = UUID.fromString("ef00c304-ce33-45ef-9543-0b9336a2b6eb");


  		




  
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	public static final UUID uuidSpelling = UUID.fromString("536594a1-21a5-4d99-aa46-132bc7b31316");


  		




  
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	public static final UUID uuidPublicationdate = UUID.fromString("b996b34f-1313-4575-bf46-732676674290");


  		




  
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	public static final UUID uuidSystematics = UUID.fromString("caac0f7f-f43e-4b7c-b296-ec2d930c4d05");


  		




  
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	public static final UUID uuidClassification = UUID.fromString("aa9bffd3-1fa8-4bd7-9e25-e2d162177b3d");


  		




  
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	public static final UUID uuidEnvironment = UUID.fromString("4f8ea10d-2242-443f-9d7d-4ecccdee4953");


  		




  
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	public static final UUID uuidHabitat = UUID.fromString("b7387877-51e3-4192-b9e4-025a359f4b59");


  		




  
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	public static final UUID uuidAuthority = UUID.fromString("9c7f8908-2530-4900-8da9-d328f7ac9031");


  		




  
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	public static final UUID uuidMorphology = UUID.fromString("5be1f948-d85f-497f-a0d5-4e5f3b227274");


  		




  
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	public static final UUID uuidTaxonomicRemarks = UUID.fromString("cc863aee-8da9-448b-82cd-47e3af942998");


  		




  
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	public static final UUID uuidNote = UUID.fromString("2c66d35f-c76e-40e0-951b-f2c340e5973f");


  		




  
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	public static final UUID uuidTaxonomy = UUID.fromString("d5734631-c86b-4212-9b8d-cb62f813e0a0");


  		




  
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	public static final UUID uuidTaxonomicstatus = UUID.fromString("ffbadab5-a8bc-4fb6-a6b3-d1f2593187ff");


  		




  
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	public static final UUID uuidStatus = UUID.fromString("fcc50853-bcff-4d0f-bc9a-123d7f175490");


  		




  
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	public static final UUID uuidRank = UUID.fromString("cabada57-a098-47fc-929f-31c8c910f6cf");


  		




  
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	public static final UUID uuidHomonymy = UUID.fromString("2791a14f-49b2-417f-a248-84c3d022d75f");


  		




  
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	public static final UUID uuidNomenclature = UUID.fromString("15fe184f-4aab-4076-8bbb-3415d6f1f27f");


  		




  
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	public static final UUID uuidTypespecies = UUID.fromString("cf674b0d-76e2-4628-952c-2cd06e209c6e");


  		




  
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	public static final UUID uuidTaxonomicRemark = UUID.fromString("044e7c4e-aab8-4f44-bfa5-0339e7576c74");


  		




  
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	public static final UUID uuidDateofPublication = UUID.fromString("2a416574-69db-4f80-b9a7-b912d5ed1816");


  		




  
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	public static final UUID uuidAcknowledgments = UUID.fromString("3b2fd495-3f9a-480e-986a-7643741177da");


  		




  
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	public static final UUID uuidOriginalpublication = UUID.fromString("ea9b7e53-0487-499f-a281-3d82d10e76dd");


  		




  
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	public static final UUID uuidTypelocality = UUID.fromString("7c1c5779-2b4b-467b-b2ca-5ca2e029e116");


  		




  
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	public static final UUID uuidValidity = UUID.fromString("bd066f25-935b-4b4e-a2eb-3fbfcd5e608f");


  		




  
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	public static final UUID uuidIdentification = UUID.fromString("dec3cd5b-0690-4035-825d-bda9aee96bc1");


  		




  
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	public static final UUID uuidSynonymy = UUID.fromString("f5c8be5f-8d33-47df-838e-55fc7999fc81");


  		




  
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	public static NomenclaturalCode kingdomId2NomCode(Integer kingdomId){


  		




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		switch (kingdomId){


  		




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		}


  		




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	}


  		




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	public static Language languageByErmsAbbrev(String ermsAbbrev) throws IllegalArgumentException {


  		




  
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	public Language getLanguageByKey(String ermsAbbrev) throws IllegalArgumentException {


  		




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		Set<String> unhandledLanguages = new HashSet<String>();


  		




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		if (CdmUtils.isEmpty(ermsAbbrev)){return null;


  		




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		}else if (ermsAbbrev.equals("af")){return Language.AFRIKAANS();


  		




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			throw new IllegalArgumentException("Unknown note type " + type);


  		




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		}


  		




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	}


  		




  
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	/* (non-Javadoc)


  		




  
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	 * @see eu.etaxonomy.cdm.io.common.mapping.InputTransformerBase#getFeatureByKey(java.lang.String)


  		




  
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	 */


  		




  
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	@Override


  		




  
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	public Feature getFeatureByKey(String key) throws UndefinedTransformerMethodException {


  		




  
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		if (CdmUtils.isEmpty(key)){return null;


  		




  
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		}else if (key.equalsIgnoreCase("Distribution")){return Feature.DISTRIBUTION();


  		




  
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		}else if (key.equalsIgnoreCase("Ecology")){return Feature.ECOLOGY();


  		




  
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		}else if (key.equalsIgnoreCase("Diagnosis")){return Feature.DIAGNOSIS();


  		




  
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		}else if (key.equalsIgnoreCase("Biology")){return Feature.BIOLOGY_ECOLOGY();


  		




  
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		}else if (key.equalsIgnoreCase("Host")){return Feature.HOSTPLANT();


  		




  
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		}else{


  		




  
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			return null;


  		




  
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		}


  		




  
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	}


  		




  
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	/* (non-Javadoc)


  		




  
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	 * @see eu.etaxonomy.cdm.io.common.mapping.InputTransformerBase#getFeatureUuid(java.lang.String)


  		




  
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	 */


  		




  
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	@Override


  		




  
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	public UUID getFeatureUuid(String key)


  		




  
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			throws UndefinedTransformerMethodException {


  		




  
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		if (CdmUtils.isEmpty(key)){return null;


  		




  
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		}else if (key.equalsIgnoreCase("Remark")){return uuidRemark;


  		




  
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		}else if (key.equalsIgnoreCase("Additional information")){return uuidAdditionalinformation;


  		




  
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		}else if (key.equalsIgnoreCase("Spelling")){return uuidSpelling;


  		




  
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		}else if (key.equalsIgnoreCase("Publication date")){return uuidPublicationdate;


  		




  
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		}else if (key.equalsIgnoreCase("Systematics")){return uuidSystematics;


  		




  
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		}else if (key.equalsIgnoreCase("Classification")){return uuidClassification;


  		




  
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		}else if (key.equalsIgnoreCase("Environment")){return uuidEnvironment;


  		




  
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		}else if (key.equalsIgnoreCase("Habitat")){return uuidHabitat;


  		




  
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		}else if (key.equalsIgnoreCase("Authority")){return uuidAuthority;


  		




  
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		}else if (key.equalsIgnoreCase("Morphology")){return uuidMorphology;


  		




  
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		}else if (key.equalsIgnoreCase("Taxonomic Remarks")){return uuidTaxonomicRemarks;


  		




  
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		}else if (key.equalsIgnoreCase("Note")){return uuidNote;


  		




  
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		}else if (key.equalsIgnoreCase("Taxonomy")){return uuidTaxonomy;


  		




  
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		}else if (key.equalsIgnoreCase("Taxonomic status")){return uuidTaxonomicstatus;


  		




  
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		}else if (key.equalsIgnoreCase("Status")){return uuidStatus;


  		




  
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		}else if (key.equalsIgnoreCase("Rank")){return uuidRank;


  		




  
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		}else if (key.equalsIgnoreCase("Homonymy")){return uuidHomonymy;


  		




  
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		}else if (key.equalsIgnoreCase("Nomenclature")){return uuidNomenclature;


  		




  
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		}else if (key.equalsIgnoreCase("Type species")){return uuidTypespecies;


  		




  
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		}else if (key.equalsIgnoreCase("Taxonomic Remark")){return uuidTaxonomicRemark;


  		




  
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		}else if (key.equalsIgnoreCase("Date of Publication")){return uuidDateofPublication;


  		




  
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		}else if (key.equalsIgnoreCase("Acknowledgments")){return uuidAcknowledgments;


  		




  
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		}else if (key.equalsIgnoreCase("Original publication")){return uuidOriginalpublication;


  		




  
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		}else if (key.equalsIgnoreCase("Type locality")){return uuidTypelocality;


  		




  
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		}else if (key.equalsIgnoreCase("Validity")){return uuidValidity;


  		




  
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		}else if (key.equalsIgnoreCase("Identification")){return uuidIdentification;


  		




  
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		}else if (key.equalsIgnoreCase("Synonymy")){return uuidSynonymy;


  		




  
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		}else{


  		




  
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			return null;


  		




  
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		}


  		




  
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	}


  		




  
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}


  		












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