updated to be compatible with hibernate4
minor
removing obsoltete classes
deprecating obsoltete classes
removing old lines of code
java doc
fixing bug in filterDistributions()
using uuid instead of id as key - fixes broken test
filtering of distributions for publication fixed ()
fixing stack overflow due to incorrect usage of freetext sessions
reducing batch size, reducing max memory consumption, batch processes now running with lower priority (=3)
always updating priorities in transmission engine (avoids errors due to missing priorities)
reverted batch size back to 100
removed unused imports
TransmissionEngineDistribution separating byArea and byRank aggregation - correcting progressmonitor work ticks
TransmissionEngineDistribution separating byArea and byRank aggregation
removing test code
lucene search: fixing grouping problem and basic indexing of term hierachies
reenabling some lines of code
first working implementation of the Occurrence freetext search with spatial search
INameService : added findByNameFuzzySearch method to search names by fuzzy matching NameServiceImpl : implemented findByNameFuzzySearch and helper methods LuceneSearch : added new simple (TopDocs based) executeSearch method ISearchResultBuilder : added createResultSet method for generating a result set for TopDocs...
Added Creation of dictionaries within the mass indexer
also preferring computed distributions in getOrderedDistributions()
remove imports
avoid duplicates in derived unit media list
change method name
added TaxonNameBase to the mass indexer list
fixing test problem and reenabling tests
marker.markerType always initialized and serialized
filtering descriptionElements by computed marker
@Override and comments
removing obsoltete methods and cleaning up
adding generics and fixing deprecation
removing profiling code
Solving all outOfHeap problems
Solving outOfHeap problem only without freetext indexing
missing @Overrides
solving minor merge problem
Improvements to TransmissionEngineDistribution, basic monitoring added and new service and dao methods for pageRankSpecificRootNodes()
adding missing @Override
renaming TransmissionEngineOccurrence to TransmissionEngineDistribution
reloading areas and some doc
hibernate4 update for ConversationHolder (maybe not yet fully ready)
upgrade some spring.hibernate3 dependencies to spring.hibernate4
add factory method for derivation event with type parameter
fix spring security version and some other minor dependency issues
add authentication to ICdmAppController
central configuration of admin login and default password in eu.etaxonomy.cdm.config.Configuration - (missing bit)
central configuration of admin login and default password in eu.etaxonomy.cdm.config.Configuration
switching transaction propagation strategy from Propagation.SUPPORTS to Propagation.REQUIRED, see http://dev.e-taxonomy.eu/trac/wiki/CdmTransactions
merge trunk and bugfix linkbackuri jaxb
some changes in the ABCD206 Import
explicitely ordering taxa for test ReferenceDaoHibernateImplTest.testListCoveredTaxa()
preliminar solution for handling and setting the lucene version
solving lucene index locked problem for tests
solving problem when seaching for uuids + restoring old TaxonServiceSearchTest.xml - all FreeTextSearch tests now SUCCESFUL
removing beginTransaction() for hibernate 4 migration testing
Fixes #3285
solving lazy loading exception
check if type of synonym relation is not null
added possibility to move accepted taxon (with homotypic synonyms) to a synonym
Hibernate 4 migration. All test running except for SDDImport (Out of memory)
paging mechanism of pageByAssociatedTaxon() fixed
Lists all Media found in an any TaxonDescription, NameDescription, SpecimenOrObservationBase, DnaSample Chromatograms, etc. associated with this taxon for #3305 (Collect images via taxon relations)
TaxonNodeServiceImpl : added clearing of relation sets TaxonDaoHibernateImpl : added 'isOrphaned' field to hql query for building UuidAndTitleCache objects
TransmissionEngineOccurrence now creates descriptions tagged with MarkerType: COMPUTED
update some further dependencies
solving application context problem
TransmissionEngineOccurrence done also with test + some improvements regarding test data generation
first implementation of TransmissionEngineOccurrence and basic test
CdmApplicationDefaultConfiguration bean explicite in app context config
calls to loadRankSpecificRootNodes() in tests and other classes adapted
loadRankSpecificRootNodes() documentation
service method to list Classifications for taxonBase
server side implementation for #3305 (Collect images via taxon relations)
fixing MediaAutoInitializer & fixing bug in AbstractBeanInitializer
implementing full stack from IEventBaseDao to EventBaseController
create derived unit by derivedUnittype
fixing NPE
fixing #3224 (specimens: Collect Specimens and Observations (+ Facts) via taxon relations.)
controller method for listByAssociatedTaxon(); default OrderHints; method harmonization in DAO classes - second part
controller method for listByAssociatedTaxon(); default OrderHints; method harmonization in DAO classes
renaming listByAllAssociations() to listByAssociatedTaxon()
service for #3234 (implement cdm service method to collect SpecimensAndObservations via taxon)
just added the files of my statistics1 branche manually because reintegration failed
checking for null state (happens when initializing new state for new categorical data) to avoid NPE (ticket 3184)
fixing #2830 (NPE in /description/{uuid}/DistributionTree) - missing bit
fixing #2830 (NPE in /description/{uuid}/DistributionTree)
attempt to fix #2830 (NPE in /description/{uuid}/DistributionTree)
add filter to StatisticsConfigurator
fixing problem with run-as authentication
fixing FirestDataInterter for non security contexts
using run-as authentication in firstDataInserter
modifying FirstDataInserter for existing tests