| 1 |
f2e0fed4
|
Patrick Plitzner
|
/**
|
| 2 |
|
|
* Copyright (C) 2018 EDIT
|
| 3 |
|
|
* European Distributed Institute of Taxonomy
|
| 4 |
|
|
* http://www.e-taxonomy.eu
|
| 5 |
|
|
*
|
| 6 |
|
|
* The contents of this file are subject to the Mozilla Public License Version 1.1
|
| 7 |
|
|
* See LICENSE.TXT at the top of this package for the full license terms.
|
| 8 |
|
|
*/
|
| 9 |
|
|
package eu.etaxonomy.taxeditor.editor.descriptiveDataSet.matrix;
|
| 10 |
|
|
|
| 11 |
|
|
import java.util.Collection;
|
| 12 |
|
|
import java.util.List;
|
| 13 |
34c65e31
|
pplitzner
|
import java.util.Set;
|
| 14 |
1acb2d39
|
Patrick Plitzner
|
import java.util.UUID;
|
| 15 |
ddb0eef3
|
pplitzner
|
import java.util.stream.Collectors;
|
| 16 |
f2e0fed4
|
Patrick Plitzner
|
|
| 17 |
16bef6ee
|
Patrick Plitzner
|
import org.eclipse.core.runtime.ICoreRunnable;
|
| 18 |
|
|
import org.eclipse.core.runtime.IProgressMonitor;
|
| 19 |
|
|
import org.eclipse.core.runtime.SubMonitor;
|
| 20 |
|
|
import org.eclipse.core.runtime.jobs.IJobChangeEvent;
|
| 21 |
|
|
import org.eclipse.core.runtime.jobs.Job;
|
| 22 |
|
|
import org.eclipse.core.runtime.jobs.JobChangeAdapter;
|
| 23 |
f2e0fed4
|
Patrick Plitzner
|
import org.eclipse.jface.layout.GridDataFactory;
|
| 24 |
86bbdab9
|
Katja Luther
|
import org.eclipse.jface.viewers.IStructuredSelection;
|
| 25 |
f2e0fed4
|
Patrick Plitzner
|
import org.eclipse.jface.window.Window;
|
| 26 |
86bbdab9
|
Katja Luther
|
import org.eclipse.jface.wizard.WizardDialog;
|
| 27 |
f2e0fed4
|
Patrick Plitzner
|
import org.eclipse.swt.SWT;
|
| 28 |
|
|
import org.eclipse.swt.events.SelectionAdapter;
|
| 29 |
|
|
import org.eclipse.swt.events.SelectionEvent;
|
| 30 |
|
|
import org.eclipse.swt.layout.RowLayout;
|
| 31 |
|
|
import org.eclipse.swt.widgets.Button;
|
| 32 |
|
|
import org.eclipse.swt.widgets.Composite;
|
| 33 |
|
|
|
| 34 |
16bef6ee
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.api.application.CdmApplicationState;
|
| 35 |
34c65e31
|
pplitzner
|
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
|
| 36 |
1acb2d39
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.api.service.UpdateResult;
|
| 37 |
de4502ef
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.api.service.description.AggregationMode;
|
| 38 |
4eedd13b
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.api.service.description.StructuredDescriptionAggregationConfiguration;
|
| 39 |
16bef6ee
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.common.monitor.IRemotingProgressMonitor;
|
| 40 |
46ae6d5a
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.filter.TaxonNodeFilter;
|
| 41 |
93040e10
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.model.description.DescriptiveDataSet;
|
| 42 |
07b9b244
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.model.location.NamedArea;
|
| 43 |
34c65e31
|
pplitzner
|
import eu.etaxonomy.cdm.model.taxon.Taxon;
|
| 44 |
46ae6d5a
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
|
| 45 |
f2e0fed4
|
Patrick Plitzner
|
import eu.etaxonomy.cdm.persistence.dto.SpecimenNodeWrapper;
|
| 46 |
34c65e31
|
pplitzner
|
import eu.etaxonomy.cdm.persistence.dto.TaxonNodeDto;
|
| 47 |
2ac046d4
|
Patrick Plitzner
|
import eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin;
|
| 48 |
a8858124
|
Patrick Plitzner
|
import eu.etaxonomy.taxeditor.editor.l10n.Messages;
|
| 49 |
f2e0fed4
|
Patrick Plitzner
|
import eu.etaxonomy.taxeditor.model.MessagingUtils;
|
| 50 |
|
|
import eu.etaxonomy.taxeditor.store.CdmStore;
|
| 51 |
076adbba
|
Patrick Plitzner
|
import eu.etaxonomy.taxeditor.store.StoreUtil;
|
| 52 |
86bbdab9
|
Katja Luther
|
import eu.etaxonomy.taxeditor.ui.dialog.configurator.StructuredAggregationConfigurationWizard;
|
| 53 |
34c65e31
|
pplitzner
|
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonSelectionDialog;
|
| 54 |
f2e0fed4
|
Patrick Plitzner
|
|
| 55 |
|
|
/**
|
| 56 |
|
|
* @author pplitzner
|
| 57 |
|
|
* @since Jul 9, 2018
|
| 58 |
|
|
*/
|
| 59 |
|
|
public class CharacterMatrixBottomToolbar extends Composite{
|
| 60 |
|
|
|
| 61 |
|
|
private CharacterMatrix matrix;
|
| 62 |
|
|
|
| 63 |
|
|
public CharacterMatrixBottomToolbar(CharacterMatrix matrix, int style) {
|
| 64 |
|
|
super(matrix, style);
|
| 65 |
|
|
this.matrix = matrix;
|
| 66 |
|
|
|
| 67 |
|
|
init();
|
| 68 |
|
|
}
|
| 69 |
|
|
|
| 70 |
|
|
private void init() {
|
| 71 |
|
|
|
| 72 |
|
|
setLayout(new RowLayout());
|
| 73 |
|
|
GridDataFactory.fillDefaults().grab(true, false).applyTo(this);
|
| 74 |
|
|
|
| 75 |
f2ac0034
|
Katja Luther
|
// /**
|
| 76 |
|
|
// * Add description button
|
| 77 |
|
|
// */
|
| 78 |
|
|
// Button btnAddDescription = new Button(this, SWT.PUSH);
|
| 79 |
|
|
// btnAddDescription.setImage(ImageResources.getImage(ImageResources.ADD_ICON_GREEN));
|
| 80 |
|
|
// btnAddDescription.addSelectionListener(new SelectionAdapter() {
|
| 81 |
|
|
// @Override
|
| 82 |
|
|
// public void widgetSelected(SelectionEvent e) {
|
| 83 |
|
|
// if(StoreUtil.promptCheckIsDirty(matrix.getPart())){
|
| 84 |
|
|
// return;
|
| 85 |
|
|
// }
|
| 86 |
|
|
// SpecimenSelectionDialog dialog = new SpecimenSelectionDialog(matrix.getShell(), matrix, null);
|
| 87 |
|
|
// if(dialog.open()==Window.OK){
|
| 88 |
|
|
// Collection<SpecimenNodeWrapper> wrappers = dialog.getSpecimen();
|
| 89 |
|
|
// if(wrappers.stream().anyMatch(wrapper->wrapper.getTaxonDescriptionUuid()==null)
|
| 90 |
|
|
// && !MessagingUtils.confirmDialog(
|
| 91 |
|
|
// "Create Taxon Association",
|
| 92 |
|
|
// "Some specimens are not linked with taxon via IndividualsAssociation yet.\n"
|
| 93 |
|
|
// + "Do you want to create this association?")){
|
| 94 |
|
|
// return;
|
| 95 |
|
|
// }
|
| 96 |
|
|
// addRowsToMatrix(wrappers, matrix.getDescriptiveDataSet().getUuid());
|
| 97 |
|
|
// wrappers.forEach(wrapper->matrix.getSpecimenCache().remove(wrapper));
|
| 98 |
|
|
// }
|
| 99 |
|
|
// }
|
| 100 |
|
|
// });
|
| 101 |
f2e0fed4
|
Patrick Plitzner
|
/**
|
| 102 |
|
|
* Remove description button
|
| 103 |
|
|
*/
|
| 104 |
f2ac0034
|
Katja Luther
|
// Button btnRemoveDescription = new Button(this, SWT.PUSH);
|
| 105 |
|
|
// btnRemoveDescription.setImage(ImageResources.getImage(ImageResources.ACTIVE_DELETE_ICON));
|
| 106 |
|
|
// btnRemoveDescription.addSelectionListener(new SelectionAdapter() {
|
| 107 |
|
|
// @Override
|
| 108 |
|
|
// public void widgetSelected(SelectionEvent e) {
|
| 109 |
|
|
// if(StoreUtil.promptCheckIsDirty(matrix.getPart())){
|
| 110 |
|
|
// return;
|
| 111 |
|
|
// }
|
| 112 |
|
|
// if(!MessagingUtils.confirmDialog(Messages.CharacterMatrixBottomToolbar_CONFIRM_DELETE_TITLE, Messages.CharacterMatrixBottomToolbar_CONFIRM_DELETE_MESSAGE)){
|
| 113 |
|
|
// return;
|
| 114 |
|
|
// }
|
| 115 |
|
|
// int[] fullySelectedRowPositions = matrix.getBodyLayer().getSelectionLayer().getFullySelectedRowPositions();
|
| 116 |
|
|
// List<RowWrapperDTO> toRemove = new ArrayList<>();
|
| 117 |
|
|
// for (int i : fullySelectedRowPositions) {
|
| 118 |
|
|
// Object rowObject = matrix.getBodyDataProvider().getRowObject(i);
|
| 119 |
|
|
// if(rowObject instanceof RowWrapperDTO){
|
| 120 |
|
|
// toRemove.add((RowWrapperDTO) rowObject);
|
| 121 |
|
|
// }
|
| 122 |
|
|
// }
|
| 123 |
|
|
// toRemove.forEach(rowToRemove -> {
|
| 124 |
|
|
// matrix.putDescriptionToDelete(rowToRemove.getDescription().getUuid());
|
| 125 |
|
|
// matrix.getDescriptions().remove(rowToRemove);
|
| 126 |
|
|
// matrix.setDirty();
|
| 127 |
|
|
//// CdmStore.getService(IDescriptiveDataSetService.class).removeDescription(
|
| 128 |
|
|
//// rowToRemove.getDescription().getUuid(), matrix.getDescriptiveDataSet().getUuid());
|
| 129 |
|
|
// });
|
| 130 |
|
|
// }
|
| 131 |
|
|
// });
|
| 132 |
25bd222a
|
Patrick Plitzner
|
/**
|
| 133 |
|
|
* Aggregate button
|
| 134 |
|
|
*/
|
| 135 |
|
|
Button btnAggregate = new Button(this, SWT.PUSH);
|
| 136 |
a8858124
|
Patrick Plitzner
|
btnAggregate.setText(Messages.CharacterMatrixBottomToolbar_AGGREGATE);
|
| 137 |
25bd222a
|
Patrick Plitzner
|
btnAggregate.addSelectionListener(new SelectionAdapter() {
|
| 138 |
|
|
@Override
|
| 139 |
|
|
public void widgetSelected(SelectionEvent e) {
|
| 140 |
328bcdec
|
Patrick Plitzner
|
if(StoreUtil.promptCheckIsDirty(matrix.getPart())){
|
| 141 |
076adbba
|
Patrick Plitzner
|
return;
|
| 142 |
|
|
}
|
| 143 |
16bef6ee
|
Patrick Plitzner
|
aggregatDescriptiveDataSet(matrix.getDescriptiveDataSet().getUuid());
|
| 144 |
25bd222a
|
Patrick Plitzner
|
}
|
| 145 |
|
|
});
|
| 146 |
2c450f49
|
Patrick Plitzner
|
/**
|
| 147 |
|
|
* Key generation button
|
| 148 |
|
|
*/
|
| 149 |
|
|
Button btnGenerateKey = new Button(this, SWT.PUSH);
|
| 150 |
|
|
btnGenerateKey.setText("Generate Polytomous Key");
|
| 151 |
|
|
btnGenerateKey.addSelectionListener(new SelectionAdapter() {
|
| 152 |
|
|
@Override
|
| 153 |
|
|
public void widgetSelected(SelectionEvent e) {
|
| 154 |
|
|
if(StoreUtil.promptCheckIsDirty(matrix.getPart())){
|
| 155 |
|
|
return;
|
| 156 |
|
|
}
|
| 157 |
|
|
Set<TaxonNodeDto> nodeDtos = matrix.getDescriptiveDataSet().getTaxonSubtreeFilter().stream()
|
| 158 |
|
|
.map(node->new TaxonNodeDto(node))
|
| 159 |
|
|
.collect(Collectors.toSet());
|
| 160 |
|
|
TaxonNodeDto parentDto = CdmStore.getService(ITaxonNodeService.class).findCommonParentDto(nodeDtos);
|
| 161 |
|
|
UUID taxonUuid = parentDto.getTaxonUuid();
|
| 162 |
|
|
int response = MessagingUtils.confirmDialog(
|
| 163 |
|
|
"Choose taxonomic scope",
|
| 164 |
|
|
String.format("The common parent taxon of this data set is :\n%s\n\n"
|
| 165 |
|
|
+ "Do you want to use this as the taxonomic scope for the polytomous key?"
|
| 166 |
|
|
, parentDto.getTaxonTitleCache()), "Yes", "Choose different taxon", "Cancel");
|
| 167 |
|
|
if(response==2){
|
| 168 |
|
|
return;
|
| 169 |
|
|
}
|
| 170 |
|
|
else if(response==1){
|
| 171 |
|
|
Taxon taxon = TaxonSelectionDialog.selectTaxon(getShell(), null);
|
| 172 |
|
|
if(taxon==null){
|
| 173 |
34c65e31
|
pplitzner
|
return;
|
| 174 |
|
|
}
|
| 175 |
2c450f49
|
Patrick Plitzner
|
taxonUuid = taxon.getUuid();
|
| 176 |
93040e10
|
Patrick Plitzner
|
}
|
| 177 |
2c450f49
|
Patrick Plitzner
|
generateKey(matrix.getDescriptiveDataSet().getUuid(), taxonUuid);
|
| 178 |
|
|
}
|
| 179 |
8ab41788
|
Patrick Plitzner
|
|
| 180 |
2c450f49
|
Patrick Plitzner
|
});
|
| 181 |
f2e0fed4
|
Patrick Plitzner
|
}
|
| 182 |
bd5a558a
|
Patrick Plitzner
|
|
| 183 |
16bef6ee
|
Patrick Plitzner
|
private void aggregatDescriptiveDataSet(UUID descriptiveDataSetUuid){
|
| 184 |
f8c40685
|
Katja Luther
|
|
| 185 |
4eedd13b
|
Patrick Plitzner
|
StructuredDescriptionAggregationConfiguration config = StructuredDescriptionAggregationConfiguration.NewInstance(
|
| 186 |
|
|
null, null);
|
| 187 |
86bbdab9
|
Katja Luther
|
IStructuredSelection sel = matrix.getSelection();
|
| 188 |
|
|
Object o = sel.getFirstElement();
|
| 189 |
07b9b244
|
Patrick Plitzner
|
TaxonNodeFilter filter = TaxonNodeFilter.NewRankInstance(matrix.getDescriptiveDataSet().getMinRank(),
|
| 190 |
|
|
matrix.getDescriptiveDataSet().getMaxRank());
|
| 191 |
|
|
for (NamedArea namedArea : matrix.getDescriptiveDataSet().getGeoFilter()) {
|
| 192 |
|
|
filter = filter.orArea(namedArea.getUuid());
|
| 193 |
|
|
}
|
| 194 |
86bbdab9
|
Katja Luther
|
// for (TaxonNode taxonNode : matrix.getDescriptiveDataSet().getTaxonSubtreeFilter()) {
|
| 195 |
|
|
// filter = filter.orSubtree(taxonNode);
|
| 196 |
|
|
// }
|
| 197 |
|
|
|
| 198 |
|
|
if (o instanceof TaxonNodeDto){
|
| 199 |
|
|
filter = filter.orSubtree(CdmStore.getService(ITaxonNodeService.class).load(((TaxonNodeDto)o).getUuid()));
|
| 200 |
|
|
}else{
|
| 201 |
|
|
for (TaxonNode taxonNode : matrix.getDescriptiveDataSet().getTaxonSubtreeFilter()) {
|
| 202 |
|
|
filter = filter.orSubtree(taxonNode);
|
| 203 |
|
|
}
|
| 204 |
46ae6d5a
|
Patrick Plitzner
|
}
|
| 205 |
|
|
config.setTaxonNodeFilter(filter);
|
| 206 |
|
|
|
| 207 |
86bbdab9
|
Katja Luther
|
config.setDatasetUuid(matrix.getDescriptiveDataSet().getUuid());
|
| 208 |
|
|
config.setAggregateToHigherRanks(true);
|
| 209 |
|
|
config.setAggregationMode(AggregationMode.byAreasAndRanks());
|
| 210 |
|
|
config.setAdaptBatchSize(false);
|
| 211 |
f8c40685
|
Katja Luther
|
TaxonNodeDto node = null;
|
| 212 |
|
|
if (o instanceof TaxonNodeDto){
|
| 213 |
|
|
node =(TaxonNodeDto)o;
|
| 214 |
|
|
}
|
| 215 |
|
|
StructuredAggregationConfigurationWizard aggregationWizard = new StructuredAggregationConfigurationWizard(config, this.matrix.getDescriptiveDataSet(), null);
|
| 216 |
86bbdab9
|
Katja Luther
|
WizardDialog dialog = new WizardDialog(StoreUtil.getShell(),
|
| 217 |
|
|
aggregationWizard);
|
| 218 |
|
|
|
| 219 |
|
|
int open = dialog.open();
|
| 220 |
|
|
if (open != Window.OK){
|
| 221 |
|
|
return;
|
| 222 |
|
|
}
|
| 223 |
4eedd13b
|
Patrick Plitzner
|
UUID monitorUuid = CdmApplicationState.getLongRunningTasksService().invoke(config);
|
| 224 |
16bef6ee
|
Patrick Plitzner
|
|
| 225 |
|
|
String jobLabel = "Aggregate Descriptive Data Set";
|
| 226 |
|
|
Job job = Job.create(jobLabel, (ICoreRunnable) monitor -> {
|
| 227 |
|
|
SubMonitor subMonitor = SubMonitor.convert(monitor);
|
| 228 |
|
|
subMonitor.beginTask(jobLabel, IProgressMonitor.UNKNOWN);
|
| 229 |
|
|
IRemotingProgressMonitor remotingMonitor;
|
| 230 |
|
|
try {
|
| 231 |
|
|
remotingMonitor = CdmStore.getProgressMonitorClientManager()
|
| 232 |
|
|
.pollMonitor(jobLabel,
|
| 233 |
|
|
monitorUuid,
|
| 234 |
|
|
50,
|
| 235 |
|
|
null,
|
| 236 |
|
|
(List)null,
|
| 237 |
|
|
subMonitor);
|
| 238 |
528e8632
|
Patrick Plitzner
|
Object resultObject = remotingMonitor.getResult();
|
| 239 |
|
|
if(resultObject instanceof Exception){
|
| 240 |
|
|
MessagingUtils.errorDialog("Aggregation failed", this, "Aggregation was not successfull", TaxeditorEditorPlugin.PLUGIN_ID, (Exception)resultObject, true, true);
|
| 241 |
|
|
}
|
| 242 |
|
|
else if(resultObject instanceof UpdateResult){
|
| 243 |
40f360dd
|
pplitzner
|
DescriptiveDataSet dataSet = (DescriptiveDataSet) ((UpdateResult) resultObject).getCdmEntity();
|
| 244 |
|
|
dataSet = matrix.getCdmEntitiySession().load(dataSet, true);
|
| 245 |
|
|
// update local dataset
|
| 246 |
|
|
matrix.setDescriptiveDataSet(dataSet);
|
| 247 |
9370d21c
|
Katja Luther
|
matrix.loadDescriptions(false, false);
|
| 248 |
528e8632
|
Patrick Plitzner
|
}
|
| 249 |
ddb0eef3
|
pplitzner
|
} catch (InterruptedException e) {
|
| 250 |
|
|
return;
|
| 251 |
|
|
}
|
| 252 |
|
|
monitor.done();
|
| 253 |
|
|
});
|
| 254 |
|
|
job.addJobChangeListener(new JobChangeAdapter(){
|
| 255 |
|
|
@Override
|
| 256 |
|
|
public void done(IJobChangeEvent event) {
|
| 257 |
|
|
CharacterMatrixBottomToolbar.this.getDisplay().asyncExec(()->{
|
| 258 |
|
|
matrix.redraw();
|
| 259 |
|
|
});
|
| 260 |
|
|
}
|
| 261 |
|
|
});
|
| 262 |
|
|
job.schedule();
|
| 263 |
|
|
}
|
| 264 |
|
|
|
| 265 |
|
|
private void addRowsToMatrix(Collection<SpecimenNodeWrapper> wrappers, UUID descriptiveDataSetUuid){
|
| 266 |
|
|
UUID monitorUuid = CdmApplicationState.getLongRunningTasksService().addRowWrapperToDataset(wrappers, descriptiveDataSetUuid);
|
| 267 |
|
|
|
| 268 |
|
|
String jobLabel = "Add specimens to matrix";
|
| 269 |
|
|
Job job = Job.create(jobLabel, (ICoreRunnable) monitor -> {
|
| 270 |
|
|
SubMonitor subMonitor = SubMonitor.convert(monitor);
|
| 271 |
|
|
subMonitor.beginTask(jobLabel, IProgressMonitor.UNKNOWN);
|
| 272 |
|
|
IRemotingProgressMonitor remotingMonitor;
|
| 273 |
|
|
try {
|
| 274 |
|
|
remotingMonitor = CdmStore.getProgressMonitorClientManager()
|
| 275 |
|
|
.pollMonitor(jobLabel,
|
| 276 |
|
|
monitorUuid,
|
| 277 |
|
|
50,
|
| 278 |
|
|
null,
|
| 279 |
|
|
(List)null,
|
| 280 |
|
|
subMonitor);
|
| 281 |
|
|
Object resultObject = remotingMonitor.getResult();
|
| 282 |
|
|
if(resultObject instanceof Exception){
|
| 283 |
|
|
MessagingUtils.errorDialog("Adding specimens failed", this, "Adding specimens was not successfull", TaxeditorEditorPlugin.PLUGIN_ID, (Exception)resultObject, true, true);
|
| 284 |
|
|
}
|
| 285 |
|
|
else if(resultObject instanceof UpdateResult){
|
| 286 |
|
|
UpdateResult result = (UpdateResult)resultObject;
|
| 287 |
|
|
if(!result.getExceptions().isEmpty()){
|
| 288 |
|
|
MessagingUtils.warningDialog(Messages.CharacterMatrixBottomToolbar_ERROR_ROW_CREATION_TITLE, this,
|
| 289 |
|
|
String.format(Messages.CharacterMatrixBottomToolbar_ERROR_ROW_CREATION_MESSAGE, result.getExceptions()
|
| 290 |
|
|
.stream().map(ex->ex.toString())
|
| 291 |
|
|
.collect(Collectors.joining("\n"))));
|
| 292 |
|
|
}
|
| 293 |
40f360dd
|
pplitzner
|
DescriptiveDataSet dataSet = (DescriptiveDataSet) result.getCdmEntity();
|
| 294 |
|
|
dataSet = matrix.getCdmEntitiySession().load(dataSet, true);
|
| 295 |
c1bf973e
|
pplitzner
|
// update local dataset
|
| 296 |
40f360dd
|
pplitzner
|
matrix.setDescriptiveDataSet(dataSet);
|
| 297 |
9370d21c
|
Katja Luther
|
matrix.loadDescriptions(false, false);
|
| 298 |
ddb0eef3
|
pplitzner
|
}
|
| 299 |
16bef6ee
|
Patrick Plitzner
|
} catch (InterruptedException e) {
|
| 300 |
|
|
return;
|
| 301 |
|
|
}
|
| 302 |
|
|
monitor.done();
|
| 303 |
|
|
});
|
| 304 |
|
|
job.addJobChangeListener(new JobChangeAdapter(){
|
| 305 |
|
|
@Override
|
| 306 |
|
|
public void done(IJobChangeEvent event) {
|
| 307 |
|
|
CharacterMatrixBottomToolbar.this.getDisplay().asyncExec(()->{
|
| 308 |
|
|
matrix.redraw();
|
| 309 |
|
|
});
|
| 310 |
|
|
}
|
| 311 |
|
|
});
|
| 312 |
|
|
job.schedule();
|
| 313 |
|
|
}
|
| 314 |
|
|
|
| 315 |
8ab41788
|
Patrick Plitzner
|
private void generateKey(UUID datasetUuid, UUID taxonUuid) {
|
| 316 |
|
|
|
| 317 |
|
|
UUID monitorUuid = CdmApplicationState.getLongRunningTasksService().generatePolytomousKey(datasetUuid, taxonUuid);
|
| 318 |
|
|
|
| 319 |
|
|
String jobLabel = "Generate polytomous key";
|
| 320 |
|
|
Job job = Job.create(jobLabel, (ICoreRunnable) monitor -> {
|
| 321 |
|
|
SubMonitor subMonitor = SubMonitor.convert(monitor);
|
| 322 |
|
|
subMonitor.beginTask(jobLabel, IProgressMonitor.UNKNOWN);
|
| 323 |
|
|
IRemotingProgressMonitor remotingMonitor;
|
| 324 |
|
|
try {
|
| 325 |
|
|
remotingMonitor = CdmStore.getProgressMonitorClientManager()
|
| 326 |
|
|
.pollMonitor(jobLabel,
|
| 327 |
|
|
monitorUuid,
|
| 328 |
|
|
50,
|
| 329 |
|
|
null,
|
| 330 |
|
|
(List)null,
|
| 331 |
|
|
subMonitor);
|
| 332 |
|
|
Object resultObject = remotingMonitor.getResult();
|
| 333 |
|
|
if(resultObject instanceof Exception){
|
| 334 |
|
|
MessagingUtils.errorDialog("Key generation failed", this, "Generating the polytomous key was not successfull", TaxeditorEditorPlugin.PLUGIN_ID, (Exception)resultObject, true, true);
|
| 335 |
|
|
}
|
| 336 |
|
|
} catch (InterruptedException e) {
|
| 337 |
|
|
return;
|
| 338 |
|
|
}
|
| 339 |
|
|
monitor.done();
|
| 340 |
|
|
});
|
| 341 |
|
|
job.schedule();
|
| 342 |
|
|
|
| 343 |
|
|
}
|
| 344 |
|
|
|
| 345 |
f2e0fed4
|
Patrick Plitzner
|
}
|