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Revision e3b843e7

Added by Patricia Kelbert over 15 years ago

ABCD import & SYNTHESYS

View differences:

cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/abcd206/AbcdIO.java
665 665 
				try{
666 666 
					names = config.getCdmAppController().getTaxonService().searchTaxaByName(scientificName, sec);
667 667 
					taxon = (Taxon)names.get(0);
668 
					}
668 
				}
669 669 
				catch(Exception e){taxon=null;}
670 670 
			}
671 671 
//			taxonName = NonViralName.NewInstance(null);
......
699 699 
			taxonName = (ZoologicalName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICZN(),null);
700 700 
			if (taxonName.hasProblem())
701 701 
				problem=true;
702 
			}
702 
		}
703 703 
		if (this.nomenclatureCode.toString().equals("Botanical")){
704 704 
			taxonName  = (BotanicalName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICBN(),null);
705 705 
			if (taxonName.hasProblem())
......
715 715 
				problem=true;;
716 716 
		}
717 717 
//		if (this.nomenclatureCode.toString().equals("Viral")){
718 
//			ViralName taxonName = (ViralName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICVCN(), null);
719 
//			if (taxonName.hasProblem())
720 
//				System.out.println("pb ICVCN");
718 
//		ViralName taxonName = (ViralName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICVCN(), null);
719 
//		if (taxonName.hasProblem())
720 
//		System.out.println("pb ICVCN");
721 721 
//		}
722 722 
		//TODO: parsing of ViralNames?
723 723 
		if(problem){
......
725 725 
			taxonName.setTitleCache(scientificName);
726 726 
		}
727 727 
		return taxonName;
728
728 

  		




  729
  729
  
    
	}


  		




  730
  730
  
    

  		




  731
  731
  
    
	@SuppressWarnings("unchecked")


  		




  ......




  830
  830
  
    
			else return taxonName;


  		




  831
  831
  
    
		}


  		




  832
  832
  
    
//		if (this.nomenclatureCode.equals("Viral")){


  		




  833
  
  
    
//			ViralName taxonName = ViralName.NewInstance(null);


  		




  834
  
  
    
//			taxonName.setFullTitleCache(fullName, true);


  		




  835
  
  
    
//			taxonName.setAcronym(getFromMap(atomisedMap,"Acronym"));


  		




  836
  
  
    
//			if (taxonName.hasProblem())


  		




  837
  
  
    
//				System.out.println("pb ICVCN");


  		




  838
  
  
    
//			else return taxonName;


  		




  
  833
  
    
//		ViralName taxonName = ViralName.NewInstance(null);


  		




  
  834
  
    
//		taxonName.setFullTitleCache(fullName, true);


  		




  
  835
  
    
//		taxonName.setAcronym(getFromMap(atomisedMap,"Acronym"));


  		




  
  836
  
    
//		if (taxonName.hasProblem())


  		




  
  837
  
    
//		System.out.println("pb ICVCN");


  		




  
  838
  
    
//		else return taxonName;


  		




  839
  839
  
    
//		}


  		




  840
  840
  
    
		//TODO ViralName


  		




  841
  841
  
    
		NonViralName<?>taxonName = NonViralName.NewInstance(null);


  		




  ......




  881
  881
  
    
		try {


  		




  882
  882
  
    
//			ReferenceBase sec = Database.NewInstance();


  		




  883
  883
  
    
//			sec.setTitleCache("XML DATA");


  		




  884
  
  
    
			ReferenceBase sec = config.getSourceReference();


  		




  
  884
  
    
			ReferenceBase sec = config.getTaxonReference();


  		




  885
  885
  
    

  		




  886
  886
  
    
			/**


  		




  887
  887
  
    
			 * SPECIMEN OR OBSERVATION OR LIVING


  		




  ......




  967
  967
  
    
						imd = new ImageMetaData();


  		




  968
  968
  
    
						url = new URL(this.multimediaObjects.get(i));


  		




  969
  969
  
    
						imd = mmd.readImageMetaData(url, imd);


  		




  970
  
  
    
						representation = MediaRepresentation.NewInstance();


  		




  971
  
  
    
						imf = ImageFile.NewInstance(this.multimediaObjects.get(i), null, imd);


  		




  972
  
  
    
						representation.addRepresentationPart(imf);


  		




  973
  
  
    
						media = Media.NewInstance();


  		




  974
  
  
    
						media.addRepresentation(representation);


  		




  975
  
  
    
						fieldObservation.addMedia(media);


  		




  
  970
  
    
						if (imd != null){


  		




  
  971
  
    
							System.out.println("image not null");


  		




  
  972
  
    
							representation = MediaRepresentation.NewInstance();


  		




  
  973
  
    
							imf = ImageFile.NewInstance(this.multimediaObjects.get(i), null, imd);


  		




  
  974
  
    
							representation.addRepresentationPart(imf);


  		




  
  975
  
    
							media = Media.NewInstance();


  		




  
  976
  
    
							media.addRepresentation(representation);


  		




  
  977
  
    
							fieldObservation.addMedia(media);


  		




  
  978
  
    
						}


  		




  976
  979
  
    
					}


  		




  977
  980
  
    
				}


  		




  978
  981
  
    
			}


  		












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