EDIT

/**

 * Copyright (C) 2007 EDIT

 * European Distributed Institute of Taxonomy

 * http://www.e-taxonomy.eu

 *

 * The contents of this file are subject to the Mozilla Public License Version 1.1

 * See LICENSE.TXT at the top of this package for the full license terms.

 */

package eu.etaxonomy.cdm.io.taxonx2013;

import eu.etaxonomy.cdm.common.URI;

import java.util.HashMap;

import java.util.Map;

import java.util.UUID;

import org.apache.log4j.Logger;

import eu.etaxonomy.cdm.database.ICdmDataSource;

import eu.etaxonomy.cdm.io.common.ImportConfiguratorBase;

import eu.etaxonomy.cdm.io.common.mapping.IInputTransformer;

import eu.etaxonomy.cdm.model.agent.Person;

import eu.etaxonomy.cdm.model.name.Rank;

import eu.etaxonomy.cdm.model.reference.Reference;

import eu.etaxonomy.cdm.model.reference.ReferenceFactory;

/**

 * @author p.kelber

 * @since 2012

 */

public class TaxonXImportConfigurator

    extends ImportConfiguratorBase<TaxonXImportState, URI>{

    private static final long serialVersionUID = -7607808010688414010L;

    @SuppressWarnings("unused")

    private static final Logger logger = Logger.getLogger(TaxonXImportConfigurator.class);

    private String defaultImportClassification = null;

    //if true the information in the mods part (taxonxHeader)

    private boolean doMods = true;

    private boolean doFacts = true;

    private boolean doTypes = true;

    private boolean alwaysUseDefaultClassification = false;

    //TODO

    private static IInputTransformer defaultTransformer = null;

    //the original TaxonXImport extracted Synonyms by creating acc Taxa with partial names

    //I (AM) do not understand this but don't want to destroy code which maybe works in some cases) there

    //I created this switch for old

    //for Spiders the new version is preferred

    private boolean isUseOldUnparsedSynonymExtraction = true;

    //if false references in this rdf file are not published in the bibliography list

    private boolean isPublishReferences = true;

    private String originalSourceTaxonNamespace = "TaxonConcept";

    private String originalSourceId;

    private Map<String, Person> titleCachePerson;

    private Map<String,UUID> namedAreaDecisions = new HashMap<String,UUID>();

    private static Reference sourceRef = null;

    private Reference secundum;

    private boolean keepOriginalSecundum;

    private Rank maxRank;

    private boolean askedForHRank =false;

    private Reference sourceURL;

    private boolean lastImport=false;

    @SuppressWarnings("unchecked")

    @Override

    protected void makeIoClassList(){

        ioClassList = new Class[]{

                TaxonXImport.class,

        };

    }

    /**

     * @param uri

     * @param destination

     * @return

     */

    public static TaxonXImportConfigurator NewInstance(URI uri, ICdmDataSource destination){

        return new TaxonXImportConfigurator(uri, destination);

    }

    /**

     * @param url

     * @param destination

     */

    private TaxonXImportConfigurator(URI uri, ICdmDataSource destination) {

        super(defaultTransformer);

        setSource(uri);

        setDestination(destination);

    }

    /**

     * @param url

     * @param destination

     */

    private TaxonXImportConfigurator(ICdmDataSource destination) {

        super(defaultTransformer);

        setDestination(destination);

    }

    @SuppressWarnings("unchecked")

    @Override

    public TaxonXImportState getNewState() {

        return new TaxonXImportState(this);

    }

    @Override

    public Reference getSourceReference() {

        if (sourceReference == null){

            sourceReference =  ReferenceFactory.newGeneric();

            if (getSourceRefUuid() != null){

                sourceReference.setUuid(getSourceRefUuid());

            }

            if (sourceRef != null){

                sourceReference.setTitleCache(sourceRef.getTitleCache(), true);

            }

        }

        return sourceReference;

    }

    @Override

    public String getSourceNameString() {

        if (this.getSource() == null){

            return null;

        }else{

            return this.getSource().toString();

        }

    }

    public String getOriginalSourceTaxonNamespace() {

        return originalSourceTaxonNamespace;

    }

    public void setOriginalSourceTaxonNamespace(String originalSourceTaxonNamespace) {

        this.originalSourceTaxonNamespace = originalSourceTaxonNamespace;

    }

    public String getOriginalSourceId() {

        return originalSourceId;

    }

    public void setOriginalSourceId(String originalSourceId) {

        this.originalSourceId = originalSourceId;

    }

    /**

     * @return the doMods

     */

    public boolean isDoMods() {

        return doMods;

    }

    /**

     * @param doMods the doMods to set

     */

    public void setDoMods(boolean doMods) {

        this.doMods = doMods;

    }

    public boolean isDoFacts() {

        return doFacts;

    }

    public void setDoFacts(boolean doFacts) {

        this.doFacts = doFacts;

    }

    public boolean isDoTypes() {

        return doTypes;

    }

    public void setDoTypes(boolean doTypes) {

        this.doTypes = doTypes;

    }

    /**

     * @return the isPublishReferences

     */

    public boolean isPublishReferences() {

        return isPublishReferences;

    }

    /**

     * @param isPublishReferences the isPublishReferences to set

     */

    public void setPublishReferences(boolean isPublishReferences) {

        this.isPublishReferences = isPublishReferences;

    }

    /**

     * @param b

     */

    public void setDoAutomaticParsing(boolean b) {

    }

    /**

     * @param destination

     * @return

     */

    public static TaxonXImportConfigurator NewInstance(ICdmDataSource destination) {

        return new TaxonXImportConfigurator(destination);

    }

    /**

     * @param reference

     */

    public static void setSourceRef(Reference reference) {

        sourceRef = reference;

    }

    public Map<String, Person> getPersons() {

        return titleCachePerson;

    }

    public void setPersons(Map<String, Person> titleCachePerson) {

        this.titleCachePerson=titleCachePerson;

        //System.out.println(titleCachePerson);

    }

    public Map<String,UUID> getNamedAreaDecisions() {

        return namedAreaDecisions;

    }

    public void setNamedAreaDecisions(Map<String,UUID> namedAreaDecisions) {

        this.namedAreaDecisions = namedAreaDecisions;

    }

    public void putNamedAreaDecision(String areaStr,UUID uuid){

        this.namedAreaDecisions.put(areaStr,uuid);

    }

    public UUID getNamedAreaDecision(String areaStr){

        return namedAreaDecisions.get(areaStr);

    }

    /**

     * @return

     */

    public boolean doKeepOriginalSecundum() {

        return keepOriginalSecundum;

    }

    public void setKeepOriginalSecundum(boolean reuseSecundum) {

        this.keepOriginalSecundum = reuseSecundum;

    }

    /**

     * @return

     */

    public Reference getSecundum() {

        if(secundum == null){

            secundum = ReferenceFactory.newGeneric();

            secundum.setTitle("default secundum");

        }

        return secundum;

    }

    public void setSecundum(Reference reference){

        this.secundum=reference;

    }

    public Rank getMaxRank() {

        return maxRank;

    }

    public void setMaxRank(Rank maxRank) {

        this.maxRank = maxRank;

    }

    public boolean hasAskedForHigherRank(){

        return askedForHRank;

    }

    public void setHasAskedForHigherRank(boolean asked){

        askedForHRank=asked;

    }

    /**

     * @return

     */

    public String getImportClassificationName() {

       return defaultImportClassification;

    }

    public void setImportClassificationName(String className){

        defaultImportClassification=className;

    }

    /**

     * @param referenceUrl

     */

    public void addOriginalSource(Reference referenceUrl) {

       this.sourceURL = referenceUrl;

    }

    /**

     * @return the sourceURL

     */

    public Reference getOriginalSourceURL() {

        return sourceURL;

    }

    /**

     * @param b

     */

    public void setLastImport(boolean b) {

        lastImport=b;

    }

    public boolean getLastImport(){

        return  lastImport;

    }

	public boolean isAlwaysUseDefaultClassification() {

		return alwaysUseDefaultClassification;

	}

	public void setAlwaysUseDefaultClassification(

			boolean alwaysUseDefaultClassification) {

		this.alwaysUseDefaultClassification = alwaysUseDefaultClassification;

	}

	public boolean isUseOldUnparsedSynonymExtraction() {

		return isUseOldUnparsedSynonymExtraction;

	}

	public void setUseOldUnparsedSynonymExtraction(boolean isUseOldUnparsedSynonymExtraction) {

		this.isUseOldUnparsedSynonymExtraction = isUseOldUnparsedSynonymExtraction;

	}

}