EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.model.common;

import java.util.HashMap;

import java.util.Map;

import java.util.UUID;

import javax.persistence.Entity;

import javax.xml.bind.annotation.XmlAccessType;

import javax.xml.bind.annotation.XmlAccessorType;

import javax.xml.bind.annotation.XmlRootElement;

import javax.xml.bind.annotation.XmlType;

import org.hibernate.envers.Audited;

import org.hibernate.search.annotations.Indexed;

/**

 * @author a.mueller

 * @created 2013-06-19

 *

 */

@XmlAccessorType(XmlAccessType.FIELD)

@XmlType(name = "DefinedTerm")

@XmlRootElement(name = "DefinedTerm")

@Entity

@Indexed(index = "eu.etaxonomy.cdm.model.common.DefinedTermBase")

@Audited

public class DefinedTerm extends DefinedTermBase<DefinedTerm> implements Comparable<DefinedTerm> {

	private static final long serialVersionUID = -6965540410672076893L;

	//Determination modifier

	public static final UUID uuidConfer = UUID.fromString("20db670a-2db2-49cc-bbdd-eace33694b7f");

	public static final UUID uuidAffinis = UUID.fromString("128f0b54-73e2-4efb-bfda-a6243185a562");

	//Sex

	private static final UUID uuidMale = UUID.fromString("600a5212-cc02-431d-8a80-2bf595bd1eab");

	private static final UUID uuidFemale = UUID.fromString("b4cfe0cb-b35c-4f97-9b6b-2b3c096ea2c0");

	private static final UUID uuidHermaphrodite = UUID.fromString("0deddc65-2505-4c77-91a7-17d0de24afcc");

	private static final UUID uuidUnknown = UUID.fromString("4f5e4c51-a664-48ad-8238-2e9f49eaf8dd");

	//Marker

	private static final UUID uuidIts1 = UUID.fromString("3f2de4f6-d1a2-4c3a-be70-3c997ef92543");

	//kindOfUnit

	public static final UUID uuidSpecimenScan = UUID.fromString("acda15be-c0e2-4ea8-8783-b9b0c4ad7f03");

	public static final UUID uuidDetailImage = UUID.fromString("31eb8d02-bf5d-437c-bcc6-87a626445f34");

	//...

	protected static Map<UUID, DefinedTerm> termMap = null;

	protected static DefinedTerm getTermByUuid(UUID uuid){

		if (termMap == null){

			return null;

		}else{

			return termMap.get(uuid);

		}

	}

	public static DefinedTerm NewInstance(TermType termType, String description, String label, String labelAbbrev){

		return new DefinedTerm(termType, description, label, labelAbbrev);

	}

	public static DefinedTerm NewModifierInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.Modifier, description, label, labelAbbrev);

	}

	public static DefinedTerm NewInstitutionTypeInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.InstitutionType, description, label, labelAbbrev);

	}

	public static DefinedTerm NewStageInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.Stage, description, label, labelAbbrev);

	}

	public static DefinedTerm NewSexInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.Sex, description, label, labelAbbrev);

	}

	public static DefinedTerm NewScopeInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.Scope, description, label, labelAbbrev);

	}

	public static DefinedTerm NewDnaMarkerInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.DnaMarker, description, label, labelAbbrev);

	}

	public static DefinedTerm NewKindOfUnitInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.KindOfUnit, description, label, labelAbbrev);

	}

	public static DefinedTerm NewIdentifierTypeInstance(String description, String label, String labelAbbrev){

		return new DefinedTerm(TermType.IdentifierType, description, label, labelAbbrev);

	}

//******************* CONSTRUCTOR ***********************************/

	//for hibernate/javassist use only

	@Deprecated

	protected DefinedTerm(){super(TermType.Unknown);}

	public DefinedTerm(TermType type, String description, String label, String labelAbbrev) {

		super(type, description, label, labelAbbrev);

	}

//*************************** TERM MAP *********************/

	public static final DefinedTerm DETERMINATION_MODIFIER_AFFINIS(){

		return getTermByUuid(uuidAffinis);

	}

	public static final DefinedTerm DETERMINATION_MODIFIER_CONFER(){

		return getTermByUuid(uuidConfer);

	}

	public static DefinedTerm SEX_MALE(){

		return getTermByUuid(uuidMale);

	}

	public static DefinedTerm SEX_FEMALE(){

		return getTermByUuid(uuidFemale);

	}

	public static DefinedTerm SEX_HERMAPHRODITE(){

		return getTermByUuid(uuidHermaphrodite);

	}

	public static DefinedTerm SEX_UNKNOWN(){

		return getTermByUuid(uuidUnknown);

	}

	public static DefinedTerm ITS1_MARKER(){

		return getTermByUuid(uuidIts1);

	}

	@Override

	public void resetTerms() {

		termMap = null;

	}

	@Override

	protected void setDefaultTerms(TermVocabulary<DefinedTerm> termVocabulary) {

		if (termMap == null){

			termMap = new HashMap<UUID, DefinedTerm>();

		}

		for (DefinedTerm term : termVocabulary.getTerms()){

			termMap.put(term.getUuid(), term);

		}

	}

	@Override

	protected int partOfCsvLineIndex(){

		return 5;

	}

//	@Override

//	void readIsPartOf(DefinedTerm newInstance, List<String> csvLine, Map<UUID, DefinedTermBase> terms) {

//        int index = 7;

//		String partOfString = csvLine.get(index);

//

//        if(StringUtils.isNotBlank(partOfString)) {

//            UUID partOfUuid = UUID.fromString(partOfString);

//            DefinedTerm partOf = (DefinedTerm)terms.get(partOfUuid);

//            partOf.addIncludes(newInstance);

//        }

//

//	}

}