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9479da48
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Andreas Müller
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/* Package Annotations*/
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ee91bcd9
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ben.clark
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@javax.xml.bind.annotation.XmlSchema(namespace = "http://etaxonomy.eu/cdm/model/common/1.0", elementFormDefault = javax.xml.bind.annotation.XmlNsForm.QUALIFIED)
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a784f00f
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Katja Luther
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@com.sun.xml.bind.XmlAccessorFactory(eu.etaxonomy.cdm.jaxb.CdmAccessorFactoryImpl.class)
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8b4b44e9
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n.hoffmann
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@org.hibernate.annotations.GenericGenerators(
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{
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12ec48f6
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n.hoffmann
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/* @see {@link eu.etaxonomy.cdm.persistence.hibernate.TableGenerator} */
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@GenericGenerator(
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5d73efbd
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Andreas Kohlbecker
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name="custom-enhanced-table",
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12ec48f6
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n.hoffmann
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strategy = "eu.etaxonomy.cdm.persistence.hibernate.TableGenerator",
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parameters = {
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@Parameter(name="optimizer", value = "pooled"),
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/* initial_value = increment_size as proposed to fix an issue with pooled optimizer
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* http://opensource.atlassian.com/projects/hibernate/browse/HHH-3608?focusedCommentId=37112&page=com.atlassian.jira.plugin.system.issuetabpanels%3Acomment-tabpanel#action_37112
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*/
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@Parameter(name="initial_value", value= "10"),
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@Parameter(name="increment_size", value = "10"),
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/* we want to have a sequence per table */
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@Parameter(name="prefer_entity_table_as_segment_value", value="true")
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}
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),
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a8826ea6
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n.hoffmann
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/* Steve Ebersole of Hibernate highly recommends the use of the two new generators
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* http://relation.to/2082.lace
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* Also see: http://docs.jboss.org/hibernate/core/3.3/reference/en/html/mapping.html#mapping-declaration-id-enhanced
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*/
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/* new table generator
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* always stores sequences in a table. May be configured to return a sequence on a per table basis
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5d73efbd
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Andreas Kohlbecker
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* RECOMMENDED WHEN RUNNING A CDM DATASOURCE IN A MULTI CLIENT ENVIRONMENT
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a8826ea6
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n.hoffmann
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*/
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@GenericGenerator(
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5d73efbd
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Andreas Kohlbecker
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name="enhanced-table",
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a8826ea6
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n.hoffmann
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strategy = "org.hibernate.id.enhanced.TableGenerator",
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parameters = {
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@Parameter(name="optimizer", value = "pooled"),
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/* initial_value = increment_size as proposed to fix an issue with pooled optimizer
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* http://opensource.atlassian.com/projects/hibernate/browse/HHH-3608?focusedCommentId=37112&page=com.atlassian.jira.plugin.system.issuetabpanels%3Acomment-tabpanel#action_37112
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*/
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@Parameter(name="initial_value", value= "10"),
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@Parameter(name="increment_size", value = "10"),
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/* we want to have a sequence per table */
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@Parameter(name="prefer_entity_table_as_segment_value", value="true")
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}
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),
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/* new sequence generator
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* Using sequence when the dialect supports it, otherwise it will emulate a sequence using a table in the db
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* This method will result in database wide unique id's */
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@GenericGenerator(
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5d73efbd
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Andreas Kohlbecker
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name="enhanced-sequence",
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a8826ea6
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n.hoffmann
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strategy = "org.hibernate.id.enhanced.SequenceStyleGenerator",
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parameters = {
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@Parameter(name="optimizer", value = "pooled"),
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/* initial_value = increment_size as proposed to fix an issue with pooled optimizer
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* http://opensource.atlassian.com/projects/hibernate/browse/HHH-3608?focusedCommentId=37112&page=com.atlassian.jira.plugin.system.issuetabpanels%3Acomment-tabpanel#action_37112
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*/
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@Parameter(name="initial_value", value= "10"),
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@Parameter(name="increment_size", value = "10")
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}
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),
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/* A couple of old style generators */
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5d73efbd
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Andreas Kohlbecker
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/* generates identifiers of type long, short or int that are unique only when no other process
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* is inserting data into the same table.
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a8826ea6
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n.hoffmann
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* DO NOT USE IN A CLUSTER OR MULTIPLE CLIENT ENVIRONMENT */
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5d73efbd
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Andreas Kohlbecker
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@GenericGenerator(
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name="system-increment",
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8b4b44e9
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n.hoffmann
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strategy = "increment"
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),
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5d73efbd
|
Andreas Kohlbecker
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/* supports identity columns in DB2, MySQL, MS SQL Server, Sybase and HypersonicSQL.
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8b4b44e9
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n.hoffmann
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* The returned identifier is of type long, short or int. */
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@GenericGenerator(
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5d73efbd
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Andreas Kohlbecker
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name="system-identity",
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8b4b44e9
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n.hoffmann
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strategy = "identity"
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| 72 |
5d73efbd
|
Andreas Kohlbecker
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| 73 |
8b4b44e9
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n.hoffmann
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),
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| 74 |
5d73efbd
|
Andreas Kohlbecker
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/* uses a hi/lo algorithm to efficiently generate identifiers of type long, short or int,
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* given a table and column (by default hibernate_unique_key and next_hi respectively) as
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* a source of hi values. The hi/lo algorithm generates identifiers that are unique only
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8b4b44e9
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n.hoffmann
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* for a particular database. */
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@GenericGenerator(
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| 79 |
5d73efbd
|
Andreas Kohlbecker
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name="system-hilo",
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8b4b44e9
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n.hoffmann
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strategy = "hilo"
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),
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| 82 |
5d73efbd
|
Andreas Kohlbecker
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/* uses a sequence in DB2, PostgreSQL, Oracle, SAP DB, McKoi or a generator in Interbase.
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| 83 |
8b4b44e9
|
n.hoffmann
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* The returned identifier is of type long, short or int */
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@GenericGenerator(
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| 85 |
5d73efbd
|
Andreas Kohlbecker
|
name="system-sequence",
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| 86 |
8b4b44e9
|
n.hoffmann
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strategy = "sequence"
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),
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/* selects identity, sequence or hilo depending upon the capabilities of the underlying database. */
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@GenericGenerator(
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| 90 |
5d73efbd
|
Andreas Kohlbecker
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name="system-native",
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| 91 |
8b4b44e9
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n.hoffmann
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strategy = "native"
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)
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}
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744c877b
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n.hoffmann
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)
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| 98 |
5d73efbd
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Andreas Kohlbecker
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@org.hibernate.annotations.TypeDefs( {
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| 99 |
a13c5f66
|
Andreas Müller
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//TODO needed ??
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| 100 |
5d73efbd
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Andreas Kohlbecker
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@org.hibernate.annotations.TypeDef(name="persistentDuration", typeClass=org.jadira.usertype.dateandtime.joda.PersistentDurationAsString.class),
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| 101 |
a13c5f66
|
Andreas Müller
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@org.hibernate.annotations.TypeDef(name="dateTimeUserType", typeClass=org.jadira.usertype.dateandtime.joda.PersistentDateTime.class),
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| 102 |
1d36aa54
|
Andreas Müller
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@org.hibernate.annotations.TypeDef(name="partialUserType", typeClass=eu.etaxonomy.cdm.hibernate.PartialUserType.class),
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@org.hibernate.annotations.TypeDef(name="uuidUserType", typeClass=eu.etaxonomy.cdm.hibernate.UUIDUserType.class),
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| 104 |
5f9ffdeb
|
Andreas Müller
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@org.hibernate.annotations.TypeDef(name="uriUserType", typeClass=eu.etaxonomy.cdm.hibernate.URIUserType.class),
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| 105 |
87e91505
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Andreas Müller
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@org.hibernate.annotations.TypeDef(name="enumUserType", typeClass=eu.etaxonomy.cdm.hibernate.EnumUserType.class),
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@org.hibernate.annotations.TypeDef(name="doiUserType", typeClass=eu.etaxonomy.cdm.hibernate.DOIUserType.class)
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| 107 |
cfbd62fa
|
Andreas Müller
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})
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| 108 |
1a35ee20
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ben.clark
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@org.hibernate.annotations.AnyMetaDef(name = "CdmBase" ,
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| 109 |
5d73efbd
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Andreas Kohlbecker
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metaType="string",
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ec73a350
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ben.clark
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idType="integer",
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metaValues={
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ee91bcd9
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ben.clark
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@MetaValue(value = "eu.etaxonomy.cdm.model.agent.Institution", targetEntity = Institution.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.agent.Person", targetEntity = Person.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.agent.Team", targetEntity = Team.class),
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| 115 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.common.Annotation", targetEntity = Annotation.class),
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| 116 |
17f0cc4b
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h.fradin
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.MediaKey", targetEntity = MediaKey.class),
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| 117 |
ee91bcd9
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ben.clark
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.TaxonDescription", targetEntity = TaxonDescription.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.SpecimenDescription", targetEntity = SpecimenDescription.class),
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5d49833e
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ben.clark
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.TaxonNameDescription", targetEntity = TaxonNameDescription.class),
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| 120 |
51db8d4a
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ben.clark
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.CategoricalData", targetEntity = CategoricalData.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.CommonTaxonName", targetEntity = CommonTaxonName.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.Distribution", targetEntity = Distribution.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.IndividualsAssociation", targetEntity = IndividualsAssociation.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.QuantitativeData", targetEntity = QuantitativeData.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.TaxonInteraction", targetEntity = TaxonInteraction.class),
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| 126 |
5d49833e
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ben.clark
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@MetaValue(value = "eu.etaxonomy.cdm.model.media.Media", targetEntity = Media.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.molecular.Sequence", targetEntity = Sequence.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.name.BacterialName", targetEntity = BacterialName.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.name.BotanicalName", targetEntity = BotanicalName.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.name.CultivarPlantName", targetEntity = CultivarPlantName.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.name.ViralName", targetEntity = ViralName.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.name.ZoologicalName", targetEntity = ZoologicalName.class),
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| 133 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.occurrence.Collection", targetEntity = Collection.class),
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| 134 |
c150ee7f
|
Andreas Müller
|
@MetaValue(value = "eu.etaxonomy.cdm.model.occurrence.FieldUnit", targetEntity = FieldUnit.class),
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| 135 |
483579cd
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Andreas Müller
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@MetaValue(value = "eu.etaxonomy.cdm.model.occurrence.DerivedUnit", targetEntity = DerivedUnit.class),
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| 136 |
1d36aa54
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Andreas Müller
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Reference", targetEntity = Reference.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Journal", targetEntity = Reference.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Article", targetEntity = Reference.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Book", targetEntity = Reference.class),
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Generic", targetEntity = Reference.class),
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| 141 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Database", targetEntity = Reference.class),
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| 142 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.BookSection", targetEntity = Reference.class),
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| 143 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Reference", targetEntity = Reference.class),
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| 144 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.PrintSeries", targetEntity = Reference.class),
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| 145 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Proceedings", targetEntity = Reference.class),
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| 146 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.Thesis", targetEntity = Reference.class),
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| 147 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.reference.WebPage", targetEntity = Reference.class),
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| 148 |
ee91bcd9
|
ben.clark
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@MetaValue(value = "eu.etaxonomy.cdm.model.taxon.Synonym", targetEntity = Synonym.class),
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| 149 |
b5513990
|
Katja Luther
|
@MetaValue(value = "eu.etaxonomy.cdm.model.taxon.Taxon", targetEntity = Taxon.class),
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| 150 |
1d36aa54
|
Andreas Müller
|
@MetaValue(value = "eu.etaxonomy.cdm.model.taxon.Classification", targetEntity = Classification.class),
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| 151 |
5453a1c9
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Katja Luther
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@MetaValue(value = "eu.etaxonomy.cdm.model.description.TextData", targetEntity = TextData.class),
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| 152 |
4eef75ef
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Katja Luther
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@MetaValue(value = "eu.etaxonomy.cdm.model.agent.TeamOrPersonBase", targetEntity = TeamOrPersonBase.class),
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| 153 |
3a45cdbe
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Cherian Mathew
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@MetaValue(value = "eu.etaxonomy.cdm.model.common.User", targetEntity = User.class),
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| 154 |
fe8256b3
|
Cherian Mathew
|
@MetaValue(value = "eu.etaxonomy.cdm.model.description.PolytomousKey", targetEntity = PolytomousKey.class),
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| 155 |
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@MetaValue(value = "eu.etaxonomy.cdm.model.name.NomenclaturalStatus", targetEntity = NomenclaturalStatus.class)
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| 156 |
b5513990
|
Katja Luther
|
})
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| 157 |
9479da48
|
Andreas Müller
|
package eu.etaxonomy.cdm.model.common;
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| 158 |
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| 159 |
ec73a350
|
ben.clark
|
import org.hibernate.annotations.GenericGenerator;
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| 160 |
5d49833e
|
ben.clark
|
import org.hibernate.annotations.MetaValue;
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| 161 |
8b4b44e9
|
n.hoffmann
|
import org.hibernate.annotations.Parameter;
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| 162 |
5d49833e
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ben.clark
|
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| 163 |
ec73a350
|
ben.clark
|
import eu.etaxonomy.cdm.model.agent.Institution;
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| 164 |
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import eu.etaxonomy.cdm.model.agent.Person;
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| 165 |
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import eu.etaxonomy.cdm.model.agent.Team;
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| 166 |
5453a1c9
|
Katja Luther
|
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
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| 167 |
51db8d4a
|
ben.clark
|
import eu.etaxonomy.cdm.model.description.CategoricalData;
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| 168 |
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import eu.etaxonomy.cdm.model.description.CommonTaxonName;
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| 169 |
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import eu.etaxonomy.cdm.model.description.Distribution;
|
| 170 |
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import eu.etaxonomy.cdm.model.description.IndividualsAssociation;
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| 171 |
17f0cc4b
|
h.fradin
|
import eu.etaxonomy.cdm.model.description.MediaKey;
|
| 172 |
5d73efbd
|
Andreas Kohlbecker
|
import eu.etaxonomy.cdm.model.description.PolytomousKey;
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| 173 |
51db8d4a
|
ben.clark
|
import eu.etaxonomy.cdm.model.description.QuantitativeData;
|
| 174 |
ec73a350
|
ben.clark
|
import eu.etaxonomy.cdm.model.description.SpecimenDescription;
|
| 175 |
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import eu.etaxonomy.cdm.model.description.TaxonDescription;
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| 176 |
51db8d4a
|
ben.clark
|
import eu.etaxonomy.cdm.model.description.TaxonInteraction;
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| 177 |
5d49833e
|
ben.clark
|
import eu.etaxonomy.cdm.model.description.TaxonNameDescription;
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| 178 |
b5513990
|
Katja Luther
|
import eu.etaxonomy.cdm.model.description.TextData;
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| 179 |
5d49833e
|
ben.clark
|
import eu.etaxonomy.cdm.model.media.Media;
|
| 180 |
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import eu.etaxonomy.cdm.model.molecular.Sequence;
|
| 181 |
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import eu.etaxonomy.cdm.model.name.BacterialName;
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| 182 |
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import eu.etaxonomy.cdm.model.name.BotanicalName;
|
| 183 |
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import eu.etaxonomy.cdm.model.name.CultivarPlantName;
|
| 184 |
fe8256b3
|
Cherian Mathew
|
import eu.etaxonomy.cdm.model.name.NomenclaturalStatus;
|
| 185 |
5d49833e
|
ben.clark
|
import eu.etaxonomy.cdm.model.name.ViralName;
|
| 186 |
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import eu.etaxonomy.cdm.model.name.ZoologicalName;
|
| 187 |
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import eu.etaxonomy.cdm.model.occurrence.Collection;
|
| 188 |
c150ee7f
|
Andreas Müller
|
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
|
| 189 |
483579cd
|
Andreas Müller
|
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
|
| 190 |
1d36aa54
|
Andreas Müller
|
import eu.etaxonomy.cdm.model.reference.Reference;
|
| 191 |
5d73efbd
|
Andreas Kohlbecker
|
import eu.etaxonomy.cdm.model.taxon.Classification;
|
| 192 |
ec73a350
|
ben.clark
|
import eu.etaxonomy.cdm.model.taxon.Synonym;
|
| 193 |
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import eu.etaxonomy.cdm.model.taxon.Taxon;
|
| 194 |
5d73efbd
|
Andreas Kohlbecker
|
|