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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.model.description;
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import java.util.HashSet;
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import java.util.Set;
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import java.util.UUID;
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import javax.persistence.Entity;
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import javax.persistence.OneToMany;
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import javax.xml.bind.annotation.XmlType;
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.model.common.DefinedTermBase;
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import eu.etaxonomy.cdm.model.common.TermVocabulary;
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/**
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* Individual property of observed phenomena able to be described or measured.
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* Experts do not use the word feature for the actual description but only for
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* the property itself. Naming this class FeatureType would create confusion.
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* NEEDS TO BE COMPLEMENTED SPM / TDWG http://rs.tdwg.
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* org/ontology/voc/SpeciesProfileModel
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*
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* @author m.doering
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* @version 1.0
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* @created 08-Nov-2007 13:06:24
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*/
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@XmlType(name="Feature", factoryMethod="NewInstance")
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@Entity
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public class Feature extends DefinedTermBase {
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static Logger logger = Logger.getLogger(Feature.class);
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private boolean supportsQuantitativeData;
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private boolean supportsTextData;
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private boolean supportsDistribution;
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private boolean supportsIndividualAssociation;
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private boolean supportsTaxonInteraction;
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private boolean supportsCommonTaxonName;
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private Set<TermVocabulary> recommendedModifierEnumeration = new HashSet<TermVocabulary>();
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private Set<StatisticalMeasure> recommendedStatisticalMeasures = new HashSet<StatisticalMeasure>();
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private Set<TermVocabulary> supportedCategoricalEnumerations = new HashSet<TermVocabulary>();
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/* ***************** CONSTRUCTOR AND FACTORY METHODS **********************************/
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public static Feature NewInstance() {
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return new Feature();
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}
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public static Feature NewInstance(String term, String label, String labelAbbrev){
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return new Feature(term, label, labelAbbrev);
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}
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/**
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* Default Constructor
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*/
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public Feature() {
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super();
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}
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protected Feature(String term, String label, String labelAbbrev) {
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super(term, label, labelAbbrev);
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}
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/* *************************************************************************************/
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public boolean isSupportsQuantitativeData() {
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return supportsQuantitativeData;
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}
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public void setSupportsQuantitativeData(boolean supportsQuantitativeData) {
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this.supportsQuantitativeData = supportsQuantitativeData;
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}
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public boolean isSupportsTextData() {
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return supportsTextData;
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}
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public void setSupportsTextData(boolean supportsTextData) {
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this.supportsTextData = supportsTextData;
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}
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public boolean isSupportsDistribution() {
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return supportsDistribution;
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}
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public void setSupportsDistribution(boolean supportsDistribution) {
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this.supportsDistribution = supportsDistribution;
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}
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public boolean isSupportsIndividualAssociation() {
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return supportsIndividualAssociation;
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}
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public void setSupportsIndividualAssociation(
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boolean supportsIndividualAssociation) {
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this.supportsIndividualAssociation = supportsIndividualAssociation;
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}
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public boolean isSupportsTaxonInteraction() {
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return supportsTaxonInteraction;
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}
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public void setSupportsTaxonInteraction(boolean supportsTaxonInteraction) {
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this.supportsTaxonInteraction = supportsTaxonInteraction;
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}
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public boolean isSupportsCommonTaxonName() {
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return supportsCommonTaxonName;
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}
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public void setSupportsCommonTaxonName(boolean supportsCommonTaxonName) {
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this.supportsCommonTaxonName = supportsCommonTaxonName;
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}
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@OneToMany
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public Set<TermVocabulary> getRecommendedModifierEnumeration() {
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return recommendedModifierEnumeration;
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}
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protected void setRecommendedModifierEnumeration(
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Set<TermVocabulary> recommendedModifierEnumeration) {
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this.recommendedModifierEnumeration = recommendedModifierEnumeration;
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}
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public void addRecommendedModifierEnumeration(
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TermVocabulary recommendedModifierEnumeration) {
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this.recommendedModifierEnumeration.add(recommendedModifierEnumeration);
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}
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public void removeRecommendedModifierEnumeration(
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TermVocabulary recommendedModifierEnumeration) {
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this.recommendedModifierEnumeration.remove(recommendedModifierEnumeration);
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}
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@OneToMany
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public Set<StatisticalMeasure> getRecommendedStatisticalMeasures() {
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return recommendedStatisticalMeasures;
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}
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protected void setRecommendedStatisticalMeasures(
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Set<StatisticalMeasure> recommendedStatisticalMeasures) {
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this.recommendedStatisticalMeasures = recommendedStatisticalMeasures;
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}
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public void addRecommendedStatisticalMeasure(
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StatisticalMeasure recommendedStatisticalMeasure) {
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this.recommendedStatisticalMeasures.add(recommendedStatisticalMeasure);
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}
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public void removeRecommendedStatisticalMeasure(
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StatisticalMeasure recommendedStatisticalMeasure) {
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this.recommendedStatisticalMeasures.remove(recommendedStatisticalMeasure);
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}
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@OneToMany
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public Set<TermVocabulary> getSupportedCategoricalEnumerations() {
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return supportedCategoricalEnumerations;
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}
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protected void setSupportedCategoricalEnumerations(
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Set<TermVocabulary> supportedCategoricalEnumerations) {
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this.supportedCategoricalEnumerations = supportedCategoricalEnumerations;
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}
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public void addSupportedCategoricalEnumeration(
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TermVocabulary supportedCategoricalEnumeration) {
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this.supportedCategoricalEnumerations.add(supportedCategoricalEnumeration);
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}
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public void removeSupportedCategoricalEnumeration(
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TermVocabulary supportedCategoricalEnumeration) {
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this.supportedCategoricalEnumerations.remove(supportedCategoricalEnumeration);
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}
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private static final UUID uuidUnknown = UUID.fromString("910307f1-dc3c-452c-a6dd-af5ac7cd365c");
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private static final UUID uuidDescription = UUID.fromString("9087cdcd-8b08-4082-a1de-34c9ba9fb493");
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private static final UUID uuidDistribution = UUID.fromString("9fc9d10c-ba50-49ee-b174-ce83fc3f80c6");
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private static final UUID uuidEcology = UUID.fromString("aa923827-d333-4cf5-9a5f-438ae0a4746b");
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private static final UUID uuidBiologyEcology = UUID.fromString("9832e24f-b670-43b4-ac7c-20a7261a1d8c");
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private static final UUID uuidKey = UUID.fromString("a677f827-22b9-4205-bb37-11cb48dd9106");
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private static final UUID uuidMaterialsExamined = UUID.fromString("7c0c7571-a864-47c1-891d-01f59000dae1");
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private static final UUID uuidMaterialsMethods = UUID.fromString("1e87d9c3-0844-4a03-9686-773e2ccb3ab6");
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private static final UUID uuidEtymology = UUID.fromString("dd653d48-355c-4aec-a4e7-724f6eb29f8d");
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private static final UUID uuidDiagnosis = UUID.fromString("d43d8501-ceab-4caa-9e51-e87138528fac");
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private static final UUID uuidProtolog = UUID.fromString("7f1fd111-fc52-49f0-9e75-d0097f576b2d");
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private static final UUID uuidCommonName = UUID.fromString("fc810911-51f0-4a46-ab97-6562fe263ae5");
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private static final UUID uuidPhenology = UUID.fromString("a7786d3e-7c58-4141-8416-346d4c80c4a2");
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private static final UUID uuidOccurrence = UUID.fromString("5deff505-1a32-4817-9a74-50e6936fd630");
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private static final UUID uuidCitation = UUID.fromString("99b2842f-9aa7-42fa-bd5f-7285311e0101");
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// private static final UUID uuidDistribution = UUID.fromString("");
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// private static final UUID uuidDistribution = UUID.fromString("");
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// private static final UUID uuidDistribution = UUID.fromString("");
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// "d3c4cbb6-0025-4322-886b-cd0156753a25",,"Discussion","Discussion"
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// "86bd920d-f8c5-48b9-af1d-03f63c31de5c",,"Abstract","Abstract"
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// "e75255ca-8ff4-4905-baad-f842927fe1d3",,"Introduction","Introduction"
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// "489bf358-b78a-45e2-a691-f9f3f10446ce",,"Synopsis","Synopsis"
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// "89d3b005-9876-4923-89d9-60eb75b9583b",,"Multiple","Multiple"
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// "555a46bc-211a-476f-a022-c472970d6f8b",,"Acknowledgments","Acknowledgments"
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public static final Feature getByUuid(UUID uuid){
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return (Feature)findByUuid(uuid);
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}
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public static final Feature UNKNOWN(){
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return getByUuid(uuidUnknown);
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}
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public static final Feature DESCRIPTION(){
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return getByUuid(uuidDescription);
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}
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public static final Feature DISTRIBUTION(){
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return getByUuid(uuidDistribution);
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}
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public static final Feature ECOLOGY(){
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return getByUuid(uuidEcology);
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}
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public static final Feature BIOLOGY_ECOLOGY(){
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return getByUuid(uuidBiologyEcology);
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}
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public static final Feature KEY(){
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return getByUuid(uuidKey);
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}
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public static final Feature MATERIALS_EXAMINED(){
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return getByUuid(uuidMaterialsExamined);
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}
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public static final Feature MATERIALS_METHODS(){
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return getByUuid(uuidMaterialsMethods);
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}
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public static final Feature ETYMOLOGY(){
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return getByUuid(uuidEtymology);
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}
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public static final Feature DIAGNOSIS(){
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return getByUuid(uuidDiagnosis);
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}
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public static final Feature PROTOLOG(){
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return getByUuid(uuidProtolog);
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}
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public static final Feature COMMON_NAME(){
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return getByUuid(uuidCommonName);
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}
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public static final Feature PHENOLOGY(){
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return getByUuid(uuidPhenology);
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}
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public static final Feature OCCURRENCE(){
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return getByUuid(uuidOccurrence);
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}
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public static final Feature CITATION(){
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return getByUuid(uuidCitation);
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}
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/**
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* special kind of OrganismInteraction
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*/
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public static final Feature HYBRID_PARENT(){
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//TODO
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logger.warn("HYBRID_PARENT not yet implemented");
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return null;
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}
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}
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