EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy 

* http://www.e-taxonomy.eu

* 

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.model.common.init;

import java.io.InputStream;

import java.io.InputStreamReader;

import java.util.ArrayList;

import java.util.HashMap;

import java.util.List;

import java.util.Map;

import java.util.UUID;

import org.apache.log4j.Logger;

import org.springframework.stereotype.Component;

import au.com.bytecode.opencsv.CSVReader;

import eu.etaxonomy.cdm.common.CdmUtils;

import eu.etaxonomy.cdm.model.common.DefinedTermBase;

import eu.etaxonomy.cdm.model.common.IDefinedTerm;

import eu.etaxonomy.cdm.model.common.OrderedTermBase;

import eu.etaxonomy.cdm.model.common.OrderedTermVocabulary;

import eu.etaxonomy.cdm.model.common.TermVocabulary;

import eu.etaxonomy.cdm.model.location.NamedArea;

@Component

public class TermLoader implements ITermLoader {

	private static final Logger logger = Logger.getLogger(TermLoader.class);

	private Map<Class<? extends DefinedTermBase>,String> termFileNames = new HashMap<Class<? extends DefinedTermBase>,String>();

	public TermLoader() {

		this.termFileNames.put(NamedArea.class, "TdwgArea.csv");

	}

	public void setTermFileNames(Map<Class<? extends DefinedTermBase>,String> termFileNames) {

		this.termFileNames = termFileNames;

	}

	public <T extends DefinedTermBase> TermVocabulary<T> loadTerms(Class<T> termClass, Map<UUID,DefinedTermBase> terms) {

		String filename = termClass.getSimpleName()+".csv";

		/**

		 * Check to see if a non-standard filename should be used 

		 * ( The file should still reside in the same directory )

		 */ 

		if(termFileNames.containsKey(termClass)) {

			filename = termFileNames.get(termClass);

		}

		String strResourceFileName = "terms" + CdmUtils.getFolderSeperator() + filename;

		logger.debug("strResourceFileName is " + strResourceFileName);

		try {

			//Could we use resources?

			InputStream inputStream = CdmUtils.getReadableResourceStream("terms" + CdmUtils.getFolderSeperator() + filename);

			if (inputStream == null) {logger.info("inputStream is null");}

			CSVReader reader = new CSVReader(new InputStreamReader(inputStream));

			//vocabulary

			TermVocabulary<T> voc = null;

			String labelAbbrev = null;

			if (OrderedTermBase.class.isAssignableFrom(termClass)){

				voc = new OrderedTermVocabulary(termClass.getCanonicalName(), termClass.getSimpleName(), labelAbbrev, termClass.getCanonicalName());

			}else{

				voc = new TermVocabulary<T>(termClass.getCanonicalName(), termClass.getSimpleName(), labelAbbrev, termClass.getCanonicalName());

			}

			String [] nextLine = reader.readNext();

			if (nextLine != null){

				voc.readCsvLine(arrayedLine(nextLine));

			}

			// Ugly, I know, but I don't think we can use a static method here . . 

			T termInstance = termClass.newInstance(); 

			while ((nextLine = reader.readNext()) != null) {

				// nextLine[] is an array of values from the line

				if (nextLine.length == 0){

					continue;

				}

				T term = (T) termInstance.readCsvLine(termClass,arrayedLine(nextLine), terms);

				terms.put(term.getUuid(), term);

				voc.addTerm(term);

			}

			return voc;

		} catch (Exception e) {

			logger.error(e + " " + e.getCause() + " " + e.getMessage());

			for(StackTraceElement ste : e.getStackTrace()) {

				logger.error(ste);

			}

			throw new RuntimeException(e);

		}

	}

	private List<String> arrayedLine(String [] nextLine){

		ArrayList<String> csvTermAttributeList = new ArrayList<String>(10);

		for (String col : nextLine){

			csvTermAttributeList.add(col);

		}

		while (csvTermAttributeList.size()<10){

			csvTermAttributeList.add("");

		}

		return csvTermAttributeList;

	}

}