EDIT

moving preferences into new package and some minor changes

minor

merge trunk into v3.3 branch

some more changes to CdmPreferences including key size

exchange comments on treeNodes for issues related to OrderColumn (#3722)

javadoc for amplification

some bugfixes for TaxonNode sorting #3508

minor

minor

partial implementation of CDM preferences (dao, service and enums): #3555

rename ISectionBase -> ISection

implement Section as ReferenceType #2853

Javadoc for DnaMarker

Javadoc for molecular classes

rename materialMethodTerm -> definedMaterialOrMethod

final implementation of MaterialOrMethodEvent, Cloning, PreservationMethod, ... #3360

add serId

update script for vocabulary representations #3708 and some bugfixes on vocabularies and code

minor

add new derivation events #3714

minor

fix #3550 (duplicated reading of TermVocabulary representations during term loading)

Change WaterbodyOrCountry name to Country #3700

move static waterbody methods to NamedArea

update waterbody uuids in class, csv and TermsDataSet

move code

update some vocabulary labels and descriptions

Change WaterbodyOrCountry representation

remove dummy terms with update script #3706

add hierarchical information to DnaMarker vocabularies #3591

update NomenclaturalCode.csv to use ICNAFP

allow DefinedTerms to be partOf

split Waterbody and Country vocabulary and make waterbody an ordinary NamedArea #3700

Chloroplast DNA Markers and some more Eukaryotes #3591

bugfix for DOI handling

implement DOI class and use in Reference #3572

implement DOI class and use in Reference #3572

rename getRankByAbbrev methods to getRankByIdInVoc #3479

conservative language handling for nomenclatural status type #3545

fix duplicate idInVocabulary in term loading and schema updater #3479

persist Sequence direction via enum key #3686

adding FactoryMethods and Constructor to DNA classes and uuid/key for SequenceDirection

Change CdmMetaData term version

some javadoc and factory methods

minor changes, remove private methods

change table name Rights->RightsInfo #2945

update Collection class

fix all compilation errors for app-import 3.3

merge trunk into cdm3.3 branch

update pom vesion 3.2.3 -> 3.2.4

remove descriptionSeparated from FeatureTree #3678

serialUUID for DerivedUnit

javadoc

add kindOfUnit vocabularies to CDM and tests (update script still missing) #3568

add kindOfUnit termType #3568

replace specification by specialization

remove imports

remove commented elevation error

remove commented annotations

remove getCitation and IReferencedEntity from TaxonNameBase

some documentation

fix failing tests for linkbackUri (#3345 and #3374)

final adaptations for Annotation.linkbackUri #3374 and #3345

minor

base implementation for integration of original spelling in name cache strategy #2874

bugfix for failing TaxonNodeService test

bugfix for failing TaxonNodeService test

bugfix for preserved specimen

log text for enum exceptions

update SpecimenOrObservationTypes

some fixes for modell change branche

TitleCacheLength updater #1592

fix null rank bug

Bugfix for article cache strategy

some bugfixes and persistence implementation for abbrev title in reference

first version of abbreviated title cache generation for references : #1551

implement tree index update

minor cleanup

minor

cleanup blank abbrevLabels

latest changes to Schema updater and handling of blank abbrevLabels

Update script for termtype and some other, remove InstitutionType and COntinent, update idInVocabulary, ...

validate termType not null and some minor changes

set termType when loading terms

readCsv Class changed

fix NameFeatures csv

update update script such that no validation errors exist anymore

change some names in molecular and update the update script

merge trunk to cdm-3.3 branch

set max length for idInVocabulary

use strings for recordBasis (#2615 und #3544)

use strings for rankClass (#2615 und #3544)

use strings for sourcetypes (#2615 und #3544)

use strings for termtypes (#2615 und #3544)

VocabularyServiceImpl.java, TermVocabularyDaoImpl.java, IVocabularyService.java, ITermVocabularyDao.java : added method (findByTermType) to find all vocabularies related to a particular term type.
TermType.java : Added method (getEmptyDefinedTermBase) to return DefinedTermBase object corresponding to the (this) TermType....

implement some more term hierarchies and isKindOf and getGeneralizationOf(recursive) for IDefinedTerm #3611

added isKindOf and getGeneralisationOf(recursive) to IEnumTerm #3611

implemented IEnumTerm and its hierarchies #3611, #3618

Separate interface for DefinedTermBase and enumerations #3618

fix test after removing media from specimenOrObservation #3597