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91138b6c
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Andreas Müller
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/**
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* Copyright (C) 2007 EDIT
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861ebadd
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p.kelbert
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* European Distributed Institute of Taxonomy
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91138b6c
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Andreas Müller
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* http://www.e-taxonomy.eu
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861ebadd
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p.kelbert
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*
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91138b6c
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Andreas Müller
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.app.abcdImport;
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861ebadd
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p.kelbert
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import java.io.File;
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import java.net.URI;
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import java.net.URISyntaxException;
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91138b6c
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Andreas Müller
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.app.common.CdmDestinations;
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import eu.etaxonomy.cdm.database.DbSchemaValidation;
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861ebadd
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p.kelbert
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import eu.etaxonomy.cdm.database.ICdmDataSource;
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import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
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import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
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import eu.etaxonomy.cdm.io.specimen.excel.in.SpecimenSynthesysExcelImportConfigurator;
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91138b6c
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Andreas Müller
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/**
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* @author PK
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* @created 19.09.2008
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* @version 1.0
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*/
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public class SynthesysCacheActivator {
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861ebadd
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p.kelbert
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@SuppressWarnings("unused")
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private static Logger logger = Logger.getLogger(SynthesysCacheActivator.class);
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//database validation status (create, update, validate ...)
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// final static String xmlSource = "/home/pkelbert/workspace/proibiosphere/cdmlib-io/target/test-classes/eu/etaxonomy/cdm/io/specimen/excel/in/ExcelImportConfiguratorTest-input.xls";
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final static String xmlSource = "/home/pkelbert/Documents/Proibiosphere/ChenopodiumQuentin/GBIF data etc.xls";
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// static final ICdmDataSource cdmDestination = CdmDestinations.mon_cdm();
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// static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;
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f3715fb4
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p.kelbert
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static final ICdmDataSource cdmDestination = CdmDestinations.proibiosphere_chenopodium_local();
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861ebadd
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p.kelbert
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static DbSchemaValidation hbm2dll = DbSchemaValidation.VALIDATE;
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static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
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/**
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* @param args
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*/
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public static void main(String[] args) {
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URI source;
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try {
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URI uri = new File(xmlSource).toURI();
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source = new URI(uri.toString());
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System.out.println(source.toString());
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System.out.println("Start import from Excel Specimen data("+ source.toString() + ") ...");
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ICdmDataSource destination = cdmDestination;
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SpecimenSynthesysExcelImportConfigurator specimenImportConfigurator = SpecimenSynthesysExcelImportConfigurator.NewInstance(source, destination);
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specimenImportConfigurator.setSourceSecId("specimen");
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specimenImportConfigurator.setCheck(check);
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specimenImportConfigurator.setDbSchemaValidation(hbm2dll);
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specimenImportConfigurator.setDoAutomaticParsing(true);
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specimenImportConfigurator.setReUseExistingMetadata(true);
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specimenImportConfigurator.setAskForDate(true);
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specimenImportConfigurator.setDefaultAuthor("L.");
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specimenImportConfigurator.setClassificationName("Chenopodium");
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specimenImportConfigurator.setReUseTaxon(true);
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specimenImportConfigurator.setSourceReference(null);
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specimenImportConfigurator.setTaxonReference(null);
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// invoke import
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CdmDefaultImport<SpecimenSynthesysExcelImportConfigurator> specimenImport = new CdmDefaultImport<SpecimenSynthesysExcelImportConfigurator>();
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//new Test().invoke(tcsImportConfigurator);
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specimenImport.invoke(specimenImportConfigurator);
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System.out.println("End import from SpecimenData ("+ source.toString() + ")...");
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} catch (URISyntaxException e) {
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e.printStackTrace();
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}
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}
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91138b6c
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Andreas Müller
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}
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