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38e84b8e
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Andreas Müller
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// $Id$
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/**
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* Copyright (C) 2009 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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5947a91a
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Andreas Müller
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package eu.etaxonomy.cdm.io.pesi.out.old;
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38e84b8e
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Andreas Müller
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import java.sql.Connection;
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import java.sql.PreparedStatement;
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import java.sql.SQLException;
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a58c5f5a
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Andreas Müller
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import java.util.Arrays;
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38e84b8e
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Andreas Müller
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import org.apache.log4j.Logger;
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import org.joda.time.DateTime;
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import org.springframework.stereotype.Component;
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import org.springframework.transaction.TransactionStatus;
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import eu.etaxonomy.cdm.io.common.DbExportStateBase;
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import eu.etaxonomy.cdm.io.common.Source;
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62256e41
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Andreas Müller
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import eu.etaxonomy.cdm.io.common.mapping.UndefinedTransformerMethodException;
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eaa62bc8
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Andreas Müller
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import eu.etaxonomy.cdm.io.common.mapping.out.IdMapper;
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import eu.etaxonomy.cdm.io.common.mapping.out.MethodMapper;
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Andreas Müller
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import eu.etaxonomy.cdm.io.pesi.out.PesiExportBase;
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import eu.etaxonomy.cdm.io.pesi.out.PesiExportConfigurator;
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import eu.etaxonomy.cdm.io.pesi.out.PesiExportMapping;
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import eu.etaxonomy.cdm.io.pesi.out.PesiExportState;
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import eu.etaxonomy.cdm.io.pesi.out.PesiTransformer;
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Andreas Müller
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.Extension;
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import eu.etaxonomy.cdm.model.common.ExtensionType;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.LanguageString;
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import eu.etaxonomy.cdm.model.description.CommonTaxonName;
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import eu.etaxonomy.cdm.model.description.DescriptionBase;
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import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
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import eu.etaxonomy.cdm.model.description.Distribution;
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import eu.etaxonomy.cdm.model.description.IndividualsAssociation;
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import eu.etaxonomy.cdm.model.description.TaxonDescription;
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import eu.etaxonomy.cdm.model.description.TaxonInteraction;
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import eu.etaxonomy.cdm.model.description.TextData;
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import eu.etaxonomy.cdm.model.location.NamedArea;
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import eu.etaxonomy.cdm.model.name.TaxonNameBase;
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import eu.etaxonomy.cdm.model.taxon.Taxon;
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import eu.etaxonomy.cdm.model.taxon.TaxonBase;
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Andreas Müller
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/**
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* The export class for {@link eu.etaxonomy.cdm.model.description.DescriptionElementBase DescriptionElements}.<p>
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* Inserts into DataWarehouse database table <code>Note</code>.<p>
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* It is divided into two phases:<ul>
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* <li>Phase 1: Export of DescriptionElements as Notes.
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* <li>Phase 2: Export of TaxonName extensions <code>taxComment</code>, <code>fauComment</code> and <code>fauExtraCodes</code> as Notes.</ul>
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* @author e.-m.lee
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* @date 23.02.2010
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*
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*/
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@Component
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public class PesiNoteExport extends PesiExportBase {
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private static final Logger logger = Logger.getLogger(PesiNoteExport.class);
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private static final Class<? extends CdmBase> standardMethodParameter = DescriptionElementBase.class;
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private static int modCount = 1000;
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private static final String dbTableName = "Note";
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private static final String pluralString = "Notes";
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private static final String parentPluralString = "Taxa";
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public PesiNoteExport() {
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super();
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.DbExportBase#getStandardMethodParameter()
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*/
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@Override
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public Class<? extends CdmBase> getStandardMethodParameter() {
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return standardMethodParameter;
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.CdmIoBase#doCheck(eu.etaxonomy.cdm.io.common.IoStateBase)
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*/
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@Override
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protected boolean doCheck(PesiExportState state) {
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boolean result = true;
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return result;
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.CdmIoBase#doInvoke(eu.etaxonomy.cdm.io.common.IoStateBase)
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*/
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@Override
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c59ecc4a
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Andreas Müller
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protected void doInvoke(PesiExportState state) {
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Andreas Müller
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try {
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Andreas Müller
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logger.info("*** Started Making " + pluralString + " ...");
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38e84b8e
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Andreas Müller
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// Get the limit for objects to save within a single transaction.
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int limit = state.getConfig().getLimitSave();
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0c392a47
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Andreas Müller
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Andreas Müller
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// Stores whether this invoke was successful or not.
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boolean success = true;
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// PESI: Clear the database table Note.
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doDelete(state);
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0c392a47
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Andreas Müller
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38e84b8e
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// Start transaction
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Andreas Müller
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success &= doPhase01(state);
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38e84b8e
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Andreas Müller
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0c392a47
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Andreas Müller
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logger.info("PHASE 2...");
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doPhase02(state, limit);
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logger.info("*** Finished Making " + pluralString + " ..." + getSuccessString(success));
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if (!success){
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state.setUnsuccessfull();
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}
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return;
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} catch (SQLException e) {
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e.printStackTrace();
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logger.error(e.getMessage());
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state.setUnsuccessfull();
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}
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}
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//PHASE 01: Description Elements
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private boolean doPhase01(PesiExportState state) throws SQLException {
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logger.info("PHASE 1...");
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int count = 0;
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int pastCount = 0;
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boolean success = true;
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// Calculate the pageNumber
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int pageNumber = 1;
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int pageSize = 1000;
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// Get specific mappings: (CDM) DescriptionElement -> (PESI) Note
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PesiExportMapping mapping = getMapping();
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// Initialize the db mapper
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mapping.initialize(state);
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List<DescriptionElementBase> list = null;
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TransactionStatus txStatus = startTransaction(true);
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logger.info("Started new transaction. Fetching some " + pluralString + " (max: " + pageSize + ") ...");
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List<String> propPath = Arrays.asList(new String[]{"inDescription.taxon"});
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while ((list = getDescriptionService().listDescriptionElements(null, null, null, pageSize, pageNumber, propPath)).size() > 0) {
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logger.info("Fetched " + list.size() + " " + pluralString + ". Exporting...");
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for (DescriptionElementBase descriptionElement : list) {
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if (getNoteCategoryFk(descriptionElement) != null) {
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doCount(count++, modCount, pluralString);
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success &= mapping.invoke(descriptionElement);
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}
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38e84b8e
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Andreas Müller
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}
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0c392a47
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Andreas Müller
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38e84b8e
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Andreas Müller
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// Commit transaction
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commitTransaction(txStatus);
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0c392a47
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Andreas Müller
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logger.debug("Committed transaction.");
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logger.info("Exported " + (count - pastCount) + " " + pluralString + ". Total: " + count);
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pastCount = count;
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38e84b8e
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Andreas Müller
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0c392a47
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Andreas Müller
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// Start transaction
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38e84b8e
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Andreas Müller
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txStatus = startTransaction(true);
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0c392a47
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Andreas Müller
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logger.info("Started new transaction. Fetching some " + pluralString + " (max: " + pageSize + ") ...");
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38e84b8e
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Andreas Müller
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0c392a47
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Andreas Müller
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// Increment pageNumber
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pageNumber++;
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}
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if (list.size() == 0) {
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logger.info("No " + pluralString + " left to fetch.");
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}
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// Commit transaction
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commitTransaction(txStatus);
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logger.info("Committed transaction.");
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return success;
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}
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5c294627
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Andreas Müller
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//PHASE 02: Taxa extensions
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0c392a47
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Andreas Müller
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private void doPhase02(PesiExportState state, int limit) {
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TransactionStatus txStatus;
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txStatus = startTransaction(true);
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ExtensionType taxCommentExtensionType = (ExtensionType)getTermService().find(PesiTransformer.taxCommentUuid);
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ExtensionType fauCommentExtensionType = (ExtensionType)getTermService().find(PesiTransformer.fauCommentUuid);
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ExtensionType fauExtraCodesExtensionType = (ExtensionType)getTermService().find(PesiTransformer.fauExtraCodesUuid);
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5c294627
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Andreas Müller
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List<TaxonBase> taxonBaseList = null;
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0c392a47
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Andreas Müller
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int count = 0;
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int pastCount = 0;
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Connection connection = state.getConfig().getDestination().getConnection();
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logger.info("Started new transaction. Fetching some " + parentPluralString + " first (max: " + limit + ") ...");
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5c294627
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Andreas Müller
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//logger.warn("TODO handle extensions on taxon level, not name level (");
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while ((taxonBaseList = getTaxonService().list(null, limit, count, null, null)).size() > 0) {
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0c392a47
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Andreas Müller
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5c294627
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Andreas Müller
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logger.info("Fetched " + taxonBaseList.size() + " names. Exporting...");
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for (TaxonBase<?> taxon : taxonBaseList) {
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Set<Extension> extensions = taxon.getExtensions();
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0c392a47
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Andreas Müller
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for (Extension extension : extensions) {
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if (extension.getType().equals(taxCommentExtensionType)) {
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String taxComment = extension.getValue();
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invokeNotes(taxComment,
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PesiTransformer.getNoteCategoryFk(PesiTransformer.taxCommentUuid),
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PesiTransformer.getNoteCategoryCache(PesiTransformer.taxCommentUuid),
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5c294627
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Andreas Müller
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null, null, getTaxonFk(taxon.getName(), state),connection);
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0c392a47
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Andreas Müller
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} else if (extension.getType().equals(fauCommentExtensionType)) {
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String fauComment = extension.getValue();
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invokeNotes(fauComment,
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PesiTransformer.getNoteCategoryFk(PesiTransformer.fauCommentUuid),
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PesiTransformer.getNoteCategoryCache(PesiTransformer.fauCommentUuid),
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5c294627
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Andreas Müller
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null, null, getTaxonFk(taxon.getName(), state),connection);
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0c392a47
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Andreas Müller
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} else if (extension.getType().equals(fauExtraCodesExtensionType)) {
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String fauExtraCodes = extension.getValue();
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invokeNotes(fauExtraCodes,
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PesiTransformer.getNoteCategoryFk(PesiTransformer.fauExtraCodesUuid),
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PesiTransformer.getNoteCategoryCache(PesiTransformer.fauExtraCodesUuid),
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5c294627
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Andreas Müller
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null, null, getTaxonFk(taxon.getName(), state),connection);
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38e84b8e
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}
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}
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0c392a47
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Andreas Müller
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doCount(count++, modCount, pluralString);
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38e84b8e
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}
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38e84b8e
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// Commit transaction
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commitTransaction(txStatus);
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0c392a47
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logger.debug("Committed transaction.");
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logger.info("Exported " + (count - pastCount) + " names. Total: " + count);
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pastCount = count;
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38e84b8e
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Andreas Müller
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0c392a47
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Andreas Müller
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// Start transaction
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txStatus = startTransaction(true);
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5c294627
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Andreas Müller
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logger.info("Started new transaction. Fetching some taxa first (max: " + limit + ") ...");
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0c392a47
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}
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5c294627
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Andreas Müller
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if (taxonBaseList.size() == 0) {
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logger.info("No taxa left to fetch.");
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38e84b8e
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}
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0c392a47
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Andreas Müller
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// Commit transaction
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commitTransaction(txStatus);
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logger.debug("Committed transaction.");
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| 248 |
38e84b8e
|
Andreas Müller
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}
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/**
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| 251 |
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* @param taxComment
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* @param noteCategoryFk
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* @param noteCategoryCache
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* @param object
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* @param object2
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| 256 |
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*/
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| 257 |
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private void invokeNotes(String note, Integer noteCategoryFk,
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String noteCategoryCache, Integer languageFk, String languageCache,
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Integer taxonFk, Connection connection) {
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String notesSql = "UPDATE Note SET Note_1 = ?, NoteCategoryFk = ?, NoteCategoryCache = ?, LanguageFk = ?, LanguageCache = ? WHERE TaxonFk = ?";
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try {
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PreparedStatement notesStmt = connection.prepareStatement(notesSql);
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if (note != null) {
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notesStmt.setString(1, note);
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} else {
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notesStmt.setObject(1, null);
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}
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if (noteCategoryFk != null) {
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| 271 |
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notesStmt.setInt(2, noteCategoryFk);
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} else {
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notesStmt.setObject(2, null);
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}
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if (noteCategoryCache != null) {
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notesStmt.setString(3, noteCategoryCache);
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} else {
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notesStmt.setObject(3, null);
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}
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if (languageFk != null) {
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notesStmt.setInt(4, languageFk);
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| 284 |
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} else {
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notesStmt.setObject(4, null);
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}
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if (languageCache != null) {
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notesStmt.setString(5, languageCache);
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} else {
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notesStmt.setObject(5, null);
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}
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| 293 |
|
|
|
| 294 |
|
|
if (taxonFk != null) {
|
| 295 |
|
|
notesStmt.setInt(6, taxonFk);
|
| 296 |
|
|
} else {
|
| 297 |
|
|
notesStmt.setObject(6, null);
|
| 298 |
|
|
}
|
| 299 |
|
|
|
| 300 |
|
|
notesStmt.executeUpdate();
|
| 301 |
|
|
} catch (SQLException e) {
|
| 302 |
|
|
logger.error("Note could not be created: " + note);
|
| 303 |
|
|
e.printStackTrace();
|
| 304 |
|
|
}
|
| 305 |
|
|
|
| 306 |
|
|
|
| 307 |
|
|
}
|
| 308 |
|
|
|
| 309 |
|
|
/**
|
| 310 |
|
|
* Deletes all entries of database tables related to <code>Note</code>.
|
| 311 |
|
|
* @param state The PesiExportState
|
| 312 |
|
|
* @return Whether the delete operation was successful or not.
|
| 313 |
|
|
*/
|
| 314 |
|
|
protected boolean doDelete(PesiExportState state) {
|
| 315 |
|
|
PesiExportConfigurator pesiConfig = (PesiExportConfigurator) state.getConfig();
|
| 316 |
|
|
|
| 317 |
|
|
String sql;
|
| 318 |
|
|
Source destination = pesiConfig.getDestination();
|
| 319 |
|
|
|
| 320 |
|
|
// Clear NoteSource
|
| 321 |
|
|
sql = "DELETE FROM NoteSource";
|
| 322 |
|
|
destination.setQuery(sql);
|
| 323 |
|
|
destination.update(sql);
|
| 324 |
|
|
|
| 325 |
|
|
// Clear Note
|
| 326 |
|
|
sql = "DELETE FROM " + dbTableName;
|
| 327 |
|
|
destination.setQuery(sql);
|
| 328 |
|
|
destination.update(sql);
|
| 329 |
|
|
return true;
|
| 330 |
|
|
}
|
| 331 |
|
|
|
| 332 |
|
|
/* (non-Javadoc)
|
| 333 |
|
|
* @see eu.etaxonomy.cdm.io.common.CdmIoBase#isIgnore(eu.etaxonomy.cdm.io.common.IoStateBase)
|
| 334 |
|
|
*/
|
| 335 |
|
|
@Override
|
| 336 |
|
|
protected boolean isIgnore(PesiExportState state) {
|
| 337 |
0c392a47
|
Andreas Müller
|
return ! state.getConfig().isDoNotes();
|
| 338 |
38e84b8e
|
Andreas Müller
|
}
|
| 339 |
|
|
|
| 340 |
|
|
/**
|
| 341 |
|
|
* Returns the <code>Note_1</code> attribute.
|
| 342 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 343 |
|
|
* @return The <code>Note_1</code> attribute.
|
| 344 |
|
|
* @see MethodMapper
|
| 345 |
|
|
*/
|
| 346 |
|
|
@SuppressWarnings("unused")
|
| 347 |
|
|
private static String getNote_1(DescriptionElementBase descriptionElement) {
|
| 348 |
|
|
String result = null;
|
| 349 |
|
|
|
| 350 |
|
|
if (descriptionElement.isInstanceOf(TextData.class)) {
|
| 351 |
|
|
TextData textData = CdmBase.deproxy(descriptionElement, TextData.class);
|
| 352 |
|
|
result = textData.getText(Language.DEFAULT());
|
| 353 |
|
|
}
|
| 354 |
|
|
|
| 355 |
|
|
return result;
|
| 356 |
|
|
}
|
| 357 |
|
|
|
| 358 |
|
|
/**
|
| 359 |
|
|
* Returns the <code>Note_2</code> attribute.
|
| 360 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 361 |
|
|
* @return The <code>Note_2</code> attribute.
|
| 362 |
|
|
* @see MethodMapper
|
| 363 |
|
|
*/
|
| 364 |
|
|
@SuppressWarnings("unused")
|
| 365 |
|
|
private static String getNote_2(DescriptionElementBase descriptionElement) {
|
| 366 |
ad522a92
|
Andreas Müller
|
logger.warn("Not yet implemented");
|
| 367 |
38e84b8e
|
Andreas Müller
|
return null;
|
| 368 |
|
|
}
|
| 369 |
|
|
|
| 370 |
|
|
/**
|
| 371 |
|
|
* Returns the <code>NoteCategoryFk</code> attribute.
|
| 372 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 373 |
|
|
* @return The <code>NoteCategoryFk</code> attribute.
|
| 374 |
|
|
* @see MethodMapper
|
| 375 |
|
|
*/
|
| 376 |
|
|
private static Integer getNoteCategoryFk(DescriptionElementBase descriptionElement) {
|
| 377 |
|
|
Integer result = null;
|
| 378 |
5312971d
|
Andreas Müller
|
result = PesiTransformer.feature2NoteCategoryFk(descriptionElement.getFeature());
|
| 379 |
38e84b8e
|
Andreas Müller
|
return result;
|
| 380 |
|
|
}
|
| 381 |
|
|
|
| 382 |
|
|
/**
|
| 383 |
|
|
* Returns the <code>NoteCategoryCache</code> attribute.
|
| 384 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 385 |
|
|
* @return The <code>NoteCategoryCache</code> attribute.
|
| 386 |
|
|
* @see MethodMapper
|
| 387 |
|
|
*/
|
| 388 |
|
|
@SuppressWarnings("unused")
|
| 389 |
5312971d
|
Andreas Müller
|
private static String getNoteCategoryCache(DescriptionElementBase descriptionElement, PesiExportState state) {
|
| 390 |
|
|
return state.getTransformer().getCacheByFeature(descriptionElement.getFeature());
|
| 391 |
38e84b8e
|
Andreas Müller
|
}
|
| 392 |
|
|
|
| 393 |
|
|
/**
|
| 394 |
|
|
* Returns the <code>LanguageFk</code> attribute.
|
| 395 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 396 |
|
|
* @return The <code>LanguageFk</code> attribute.
|
| 397 |
|
|
* @see MethodMapper
|
| 398 |
|
|
*/
|
| 399 |
|
|
@SuppressWarnings("unused")
|
| 400 |
|
|
private static Integer getLanguageFk(DescriptionElementBase descriptionElement) {
|
| 401 |
df8897c8
|
Andreas Müller
|
Language language = getLanguage(descriptionElement);
|
| 402 |
38e84b8e
|
Andreas Müller
|
|
| 403 |
|
|
return PesiTransformer.language2LanguageId(language);
|
| 404 |
|
|
}
|
| 405 |
|
|
|
| 406 |
|
|
/**
|
| 407 |
|
|
* Returns the <code>LanguageCache</code> attribute.
|
| 408 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 409 |
|
|
* @return The <code>LanguageCache</code> attribute.
|
| 410 |
4ce34990
|
Andreas Müller
|
* @throws UndefinedTransformerMethodException
|
| 411 |
38e84b8e
|
Andreas Müller
|
* @see MethodMapper
|
| 412 |
|
|
*/
|
| 413 |
|
|
@SuppressWarnings("unused")
|
| 414 |
4ce34990
|
Andreas Müller
|
private static String getLanguageCache(DescriptionElementBase descriptionElement, PesiExportState state) throws UndefinedTransformerMethodException {
|
| 415 |
df8897c8
|
Andreas Müller
|
Language language = getLanguage(descriptionElement);
|
| 416 |
4ce34990
|
Andreas Müller
|
return state.getTransformer().getCacheByLanguage(language);
|
| 417 |
df8897c8
|
Andreas Müller
|
}
|
| 418 |
|
|
|
| 419 |
|
|
private static Language getLanguage(DescriptionElementBase descriptionElement) {
|
| 420 |
38e84b8e
|
Andreas Müller
|
Language language = null;
|
| 421 |
|
|
|
| 422 |
|
|
Map<Language, LanguageString> multilanguageText = null;
|
| 423 |
|
|
if (descriptionElement.isInstanceOf(CommonTaxonName.class)) {
|
| 424 |
|
|
CommonTaxonName commonTaxonName = CdmBase.deproxy(descriptionElement, CommonTaxonName.class);
|
| 425 |
|
|
language = commonTaxonName.getLanguage();
|
| 426 |
|
|
} else if (descriptionElement.isInstanceOf(TextData.class)) {
|
| 427 |
|
|
TextData textData = CdmBase.deproxy(descriptionElement, TextData.class);
|
| 428 |
|
|
multilanguageText = textData.getMultilanguageText();
|
| 429 |
|
|
} else if (descriptionElement.isInstanceOf(IndividualsAssociation.class)) {
|
| 430 |
|
|
IndividualsAssociation individualsAssociation = CdmBase.deproxy(descriptionElement, IndividualsAssociation.class);
|
| 431 |
|
|
multilanguageText = individualsAssociation.getDescription();
|
| 432 |
|
|
} else if (descriptionElement.isInstanceOf(TaxonInteraction.class)) {
|
| 433 |
|
|
TaxonInteraction taxonInteraction = CdmBase.deproxy(descriptionElement, TaxonInteraction.class);
|
| 434 |
|
|
multilanguageText = taxonInteraction.getDescriptions();
|
| 435 |
|
|
} else {
|
| 436 |
df8897c8
|
Andreas Müller
|
logger.debug("Given descriptionElement does not support languages. Hence LanguageCache could not be determined: " + descriptionElement.getUuid());
|
| 437 |
38e84b8e
|
Andreas Müller
|
}
|
| 438 |
|
|
|
| 439 |
|
|
if (multilanguageText != null) {
|
| 440 |
|
|
Set<Language> languages = multilanguageText.keySet();
|
| 441 |
|
|
|
| 442 |
|
|
// TODO: Think of something more sophisticated than this
|
| 443 |
|
|
if (languages.size() > 0) {
|
| 444 |
|
|
language = languages.iterator().next();
|
| 445 |
|
|
}
|
| 446 |
df8897c8
|
Andreas Müller
|
if (languages.size() > 1){
|
| 447 |
|
|
logger.warn("There is more than 1 language for a given description (" + descriptionElement.getClass().getSimpleName() + "):" + descriptionElement.getUuid());
|
| 448 |
|
|
}
|
| 449 |
38e84b8e
|
Andreas Müller
|
}
|
| 450 |
df8897c8
|
Andreas Müller
|
return language;
|
| 451 |
38e84b8e
|
Andreas Müller
|
}
|
| 452 |
|
|
|
| 453 |
|
|
/**
|
| 454 |
|
|
* Returns the <code>Region</code> attribute.
|
| 455 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 456 |
|
|
* @return The <code>Region</code> attribute.
|
| 457 |
|
|
* @see MethodMapper
|
| 458 |
|
|
*/
|
| 459 |
|
|
@SuppressWarnings("unused")
|
| 460 |
|
|
private static String getRegion(DescriptionElementBase descriptionElement) {
|
| 461 |
|
|
String result = null;
|
| 462 |
df8897c8
|
Andreas Müller
|
DescriptionBase<?> inDescription = descriptionElement.getInDescription();
|
| 463 |
38e84b8e
|
Andreas Müller
|
|
| 464 |
62256e41
|
Andreas Müller
|
try {
|
| 465 |
|
|
// Area information are associated to TaxonDescriptions and Distributions.
|
| 466 |
|
|
if (descriptionElement.isInstanceOf(Distribution.class)) {
|
| 467 |
|
|
Distribution distribution = CdmBase.deproxy(descriptionElement, Distribution.class);
|
| 468 |
|
|
//TODO not working any more after transformer refactoring
|
| 469 |
|
|
result = new PesiTransformer(null).getCacheByNamedArea(distribution.getArea());
|
| 470 |
|
|
} else if (inDescription != null && inDescription.isInstanceOf(TaxonDescription.class)) {
|
| 471 |
|
|
TaxonDescription taxonDescription = CdmBase.deproxy(inDescription, TaxonDescription.class);
|
| 472 |
|
|
Set<NamedArea> namedAreas = taxonDescription.getGeoScopes();
|
| 473 |
|
|
if (namedAreas.size() == 1) {
|
| 474 |
|
|
result = new PesiTransformer(null).getCacheByNamedArea(namedAreas.iterator().next());
|
| 475 |
|
|
} else if (namedAreas.size() > 1) {
|
| 476 |
|
|
logger.warn("This TaxonDescription contains more than one NamedArea: " + taxonDescription.getTitleCache());
|
| 477 |
|
|
}
|
| 478 |
38e84b8e
|
Andreas Müller
|
}
|
| 479 |
62256e41
|
Andreas Müller
|
} catch (ClassCastException e) {
|
| 480 |
|
|
// TODO Auto-generated catch block
|
| 481 |
|
|
e.printStackTrace();
|
| 482 |
|
|
} catch (UndefinedTransformerMethodException e) {
|
| 483 |
|
|
// TODO Auto-generated catch block
|
| 484 |
|
|
e.printStackTrace();
|
| 485 |
38e84b8e
|
Andreas Müller
|
}
|
| 486 |
|
|
return result;
|
| 487 |
|
|
}
|
| 488 |
|
|
|
| 489 |
|
|
/**
|
| 490 |
|
|
* Returns the <code>TaxonFk</code> attribute.
|
| 491 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 492 |
|
|
* @param state The {@link PesiExportState PesiExportState}.
|
| 493 |
|
|
* @return The <code>TaxonFk</code> attribute.
|
| 494 |
|
|
* @see MethodMapper
|
| 495 |
|
|
*/
|
| 496 |
|
|
@SuppressWarnings("unused")
|
| 497 |
96533ef2
|
Andreas Müller
|
private static Integer getTaxonFk(DescriptionElementBase descriptionElement, DbExportStateBase<?, PesiTransformer> state) {
|
| 498 |
38e84b8e
|
Andreas Müller
|
Integer result = null;
|
| 499 |
df8897c8
|
Andreas Müller
|
DescriptionBase<?> inDescription = descriptionElement.getInDescription();
|
| 500 |
38e84b8e
|
Andreas Müller
|
if (inDescription != null && inDescription.isInstanceOf(TaxonDescription.class)) {
|
| 501 |
|
|
TaxonDescription taxonDescription = CdmBase.deproxy(inDescription, TaxonDescription.class);
|
| 502 |
|
|
Taxon taxon = taxonDescription.getTaxon();
|
| 503 |
|
|
result = state.getDbId(taxon.getName());
|
| 504 |
|
|
}
|
| 505 |
|
|
return result;
|
| 506 |
|
|
}
|
| 507 |
|
|
|
| 508 |
|
|
/**
|
| 509 |
|
|
* Returns the TaxonFk for a given TaxonName.
|
| 510 |
|
|
* @param taxonName The {@link TaxonNameBase TaxonName}.
|
| 511 |
|
|
* @param state The {@link DbExportStateBase DbExportState}.
|
| 512 |
|
|
* @return
|
| 513 |
|
|
*/
|
| 514 |
96533ef2
|
Andreas Müller
|
private static Integer getTaxonFk(TaxonNameBase<?,?> taxonName, DbExportStateBase<?, PesiTransformer> state) {
|
| 515 |
38e84b8e
|
Andreas Müller
|
return state.getDbId(taxonName);
|
| 516 |
|
|
}
|
| 517 |
|
|
|
| 518 |
|
|
/**
|
| 519 |
|
|
* Returns the <code>LastAction</code> attribute.
|
| 520 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 521 |
|
|
* @return The <code>LastAction</code> attribute.
|
| 522 |
|
|
* @see MethodMapper
|
| 523 |
|
|
*/
|
| 524 |
|
|
@SuppressWarnings("unused")
|
| 525 |
|
|
private static String getLastAction(DescriptionElementBase descriptionElement) {
|
| 526 |
|
|
// TODO
|
| 527 |
|
|
return null;
|
| 528 |
|
|
}
|
| 529 |
|
|
|
| 530 |
|
|
/**
|
| 531 |
|
|
* Returns the <code>LastActionDate</code> attribute.
|
| 532 |
|
|
* @param descriptionElement The {@link DescriptionElementBase DescriptionElement}.
|
| 533 |
|
|
* @return The <code>LastActionDate</code> attribute.
|
| 534 |
|
|
* @see MethodMapper
|
| 535 |
|
|
*/
|
| 536 |
|
|
@SuppressWarnings("unused")
|
| 537 |
|
|
private static DateTime getLastActionDate(DescriptionElementBase descriptionElement) {
|
| 538 |
|
|
DateTime result = null;
|
| 539 |
|
|
return result;
|
| 540 |
|
|
}
|
| 541 |
|
|
|
| 542 |
|
|
/**
|
| 543 |
|
|
* Returns the CDM to PESI specific export mappings.
|
| 544 |
|
|
* @return The {@link PesiExportMapping PesiExportMapping}.
|
| 545 |
|
|
*/
|
| 546 |
|
|
private PesiExportMapping getMapping() {
|
| 547 |
|
|
PesiExportMapping mapping = new PesiExportMapping(dbTableName);
|
| 548 |
|
|
|
| 549 |
|
|
mapping.addMapper(IdMapper.NewInstance("NoteId"));
|
| 550 |
|
|
mapping.addMapper(MethodMapper.NewInstance("Note_1", this));
|
| 551 |
|
|
mapping.addMapper(MethodMapper.NewInstance("Note_2", this));
|
| 552 |
|
|
mapping.addMapper(MethodMapper.NewInstance("NoteCategoryFk", this));
|
| 553 |
|
|
mapping.addMapper(MethodMapper.NewInstance("NoteCategoryCache", this));
|
| 554 |
|
|
mapping.addMapper(MethodMapper.NewInstance("LanguageFk", this));
|
| 555 |
|
|
mapping.addMapper(MethodMapper.NewInstance("LanguageCache", this));
|
| 556 |
|
|
mapping.addMapper(MethodMapper.NewInstance("Region", this));
|
| 557 |
|
|
mapping.addMapper(MethodMapper.NewInstance("TaxonFk", this.getClass(), "getTaxonFk", standardMethodParameter, DbExportStateBase.class));
|
| 558 |
|
|
mapping.addMapper(MethodMapper.NewInstance("LastAction", this));
|
| 559 |
|
|
mapping.addMapper(MethodMapper.NewInstance("LastActionDate", this));
|
| 560 |
|
|
|
| 561 |
|
|
return mapping;
|
| 562 |
|
|
}
|
| 563 |
|
|
|
| 564 |
|
|
}
|