EDIT

<?php

// $Id$

/**

 * Copyright (C) 2007 EDIT

 * European Distributed Institute of Taxonomy

 * http://www.e-taxonomy.eu

 *

 * The contents of this file are subject to the Mozilla Public License Version 1.1

 * See http://www.mozilla.org/MPL/MPL-1.1.html for the full license terms.

 */

/**

 * default title for a taxon page

 *

 * @param NameTO $nameTO

 * @return the formatted taxon name

 */

function theme_cdm_taxon_page_title($taxon, $uuid){

	RenderHints::pushToRenderStack('taxon_page_title');

	if(isset($taxon->name->nomenclaturalReference)){

		$referenceUri = url(path_to_reference($taxon->name->nomenclaturalReference->uuid));

	}

	$out = theme('cdm_taxonName', $taxon->name, null, $referenceUri, false);

	RenderHints::popFromRenderStack();

	return '<span class="'.$taxon->class.'">'.$out.'</span>';

}

/**

 * Default title for a name page

 * @param $taxon_name The taxon name object

 * @return the formatted name title

 */

function theme_cdm_name_page_title($taxon_name){

	RenderHints::pushToRenderStack('taxon_page_title');

	if(isset($taxon_name->nomenclaturalReference)){

		$referenceUri = url(path_to_reference($taxon_name->nomenclaturalReference->uuid));

	}

	$out = '<span class="'.$taxon_name->class.'">'.theme('cdm_taxonName', $taxon_name, null, $referenceUri, false).'</span>';

	RenderHints::popFromRenderStack();

	return $out;

}

/**

 * A wrapper function that groups available information to show by default, when

 * a taxon page is requested by the browser.

 * Individual themeing has to decide what this page should include (see methods beneath)

 * and what information should go into tabs or should not be shown at all.

 *

 * It is headed by the name of the accepted taxon without author and reference.

 * @param $taxonTO the taxon object

 * @param $page_part name of the part to display,

 *         valid values are: 'description', 'images', 'synonymy', 'all'

 */

function theme_cdm_taxon_page_general($taxon, $page_part = 'description') {

	global $theme;

	$page_part = variable_get('cdm_dataportal_taxonpage_tabs', 1) ? $page_part : 'all';

	$hideTabs = array();

	// get images

	$prefMimeTypeRegex = 'image:.*';

	$prefMediaQuality = '*';

	//$media =  cdm_ws_get(CDM_WS_PORTAL_TAXONOMY_MEDIA, array(variable_get('cdm_taxonomictree_uuid', false),$taxon->uuid));

	$selectShowMedia = variable_get('cdm_dataportal_show_media', 0);

	if ($selectShowMedia == 0){

		$media = cdm_ws_get(CDM_WS_PORTAL_TAXON_MEDIA, array($taxon->uuid, $prefMimeTypeRegex, $prefMediaQuality));

	}else{

		$media = cdm_ws_get(CDM_WS_PORTAL_TAXON_SUBTREE_MEDIA, array($taxon->uuid, $prefMimeTypeRegex, $prefMediaQuality));

	}

	/*

	 if(!isset($mediaList[0])) {

	 $hideTabs[] = theme('cdm_taxonpage_tab', 'Images');

	 }

	 */

	if(!isset($media[0])) {

		$hideTabs[] = theme('cdm_taxonpage_tab', 'Images');

	}

	$specimensOrObersvations = cdm_ws_get(CDM_WS_TAXON, array($taxon->uuid, 'specimensOrObersvations') );

	$specimensOrObersvationsCount = is_array($specimensOrObersvations) ? count($specimensOrObersvations) : 0;

	if($specimensOrObersvationsCount == 0) {

		$hideTabs[] = theme('cdm_taxonpage_tab', 'Specimens');

	}

	// hideImage flag depending on administative preset

	$hideImages = false;

	if(variable_get('image_hide_rank', '0') != '0'){

		$rankCompare = rank_compare($taxon->name->rank->uuid, variable_get('image_hide_rank', '-99'));

		$hideImages =  ($rankCompare > -1);

	}

	// $hideTabs[] = theme('cdm_taxonpage_tab', 'General');

	// $hideTabs[] = theme('cdm_taxonpage_tab', 'Synonymy')

	// hide tabs

	$tabhide_js = '';

	foreach($hideTabs as $tabText) {

		$tabhide_js .= "$('.tabs.primary').children('li').children('a:contains(\"$tabText\")').hide();\n";

	}

	drupal_add_js("

  $(document).ready(function(){

  $tabhide_js

    });", 'inline');

  $out = '';

  $out .= theme('cdm_back_to_search_result_button');

  //var_dump(variable_get('cdm_dataportal_display_is_accepted_for', CDM_DATAPORTAL_DISPLAY_IS_ACCEPTED_FOR));

  if(variable_get('cdm_dataportal_display_is_accepted_for', CDM_DATAPORTAL_DISPLAY_IS_ACCEPTED_FOR)){

  	$out .= theme('cdm_acceptedFor', 'page_general');

  }

  // --- DESCRIPTION --- //

  if($page_part == 'description' || $page_part == 'all'){

  	$featureTree = cdm_ws_get(CDM_WS_FEATURETREE, variable_get(CDM_DATAPORTAL_DEFAULT_FEATURETREE_UUID, UUID_DEFAULT_FEATURETREE));

  	$taxonDescriptions = cdm_ws_get(CDM_WS_PORTAL_TAXON_DESCRIPTIONS, $taxon->uuid); //retrieve all description for the taxon

  	$nonStructuredDescriptions = array();

  	if($taxonDescriptions != null){

  		foreach ($taxonDescriptions as $taxonDescription) {

  			// check if structured description

  			$hasStructuredData = cdm_ws_get(CDM_WS_DESCRIPTION_HAS_STRUCTRURED_DATA, $taxonDescription->uuid);

  			$hasStructuredData = $hasStructuredData->Boolean == 'true';

  			if($hasStructuredData){

  				$structured_description_featuretree_uuid = variable_get(CDM_DATAPORTAL_STRUCTURED_DESCRIPTION_FEATURETREE_UUID, false);

  				$naturallanguage_textData = cdm_ws_get(CDM_WS_DESCRIPTION_NATURALLANGUAGE_DESCRIPTION, array($taxonDescription->uuid, $structured_description_featuretree_uuid));

  				if(!$naturallanguage_textData){

  					drupal_set_message('The \'FeatureTree\' for the generation of natural language representations is not configured correctly, please select a \'FeatureTree\' in the '.l('CDM Dataportal Settings', 'admin/settings/cdm_dataportal/layout/taxon'), 'warning');

  				}

  				$taxonDescription->elements = null;

  				$taxonDescription->elements = array($naturallanguage_textData);

  			}

  			$nonStructuredDescriptions[] = $taxonDescription;

  		}

  		$taxonDescriptions = null; // release memory

  	}

  	$mergedTrees = cdm_ws_descriptions_by_featuretree($featureTree, $nonStructuredDescriptions, variable_get('cdm_dataportal_descriptions_separated', FALSE));

  	$out .= '<div id="general">';

  	$out .= theme('cdm_taxon_page_description', $taxon, $mergedTrees, $media, $hideImages);

  	$out .= '</div>';

  }

  // --- IMAGES --- //

  if(!$hideImages && $page_part == 'images' || $page_part == 'all'){

  	$out .= '<div id="images">';

  	if($page_part == 'all'){

  		$out .= '<h2>'.t('Images').'</h2>';

  	}

  	// get the image gallery as configured by the admin

  	$taxon_image_gallery = call_user_func_array( 'taxon_image_gallery_' . variable_get('image_gallery_viewer', 'default'),

  	     array($taxon, $media));

  	$out .= $taxon_image_gallery;

  	$out .= '</div>';

  	if($theme == 'garland_cichorieae'){

  		$out .= theme('cdm_taxon_page_images_cichorieae_copyright');

  	}

  }

  // --- SYNONYMY --- //

  if($page_part == 'synonymy' || $page_part == 'all'){

  	$out .= '<div id="synonymy">';

  	if($page_part == 'all'){

  		$out .= '<h2>'.t('Synonymy').'</h2>';

  	}

  	$addAcceptedTaxon = variable_get('cdm_dataportal_nomref_in_title', CDM_DATAPORTAL_NOMREF_IN_TITLE);

  	$out .= theme('cdm_taxon_page_synonymy', $taxon, $addAcceptedTaxon);

  	$out .= '</div>';

  }

  // --- SPECIMENS --- //

  if($specimensOrObersvationsCount > 0 && ($page_part == 'specimens' || $page_part == 'all') ){

  	$out .= '<div id="specimens">';

  	if($page_part == 'all'){

  		$out .= '<h2>'.t('Specimens').'</h2>';

  	}

  	$out .= theme('cdm_taxon_page_specimens', $taxon);

  	$out .= '</div>';

  }

  return $out;

}

/**

 * Outputs all descriptive data and shows the preferred picture of the

 * accepted taxon.

 *

 */

function theme_cdm_taxon_page_description($taxon, $mergedTrees, $media = null, $hideImages = false){

	if( variable_get('cdm_dataportal_show_default_image', false) && !$hideImages){

		// preferred image

		// hardcoded for testing;

		$defaultRepresentationPart = false;

		$defaultRepresentationPart->width = 184;

		$defaultRepresentationPart->height = 144;

		$defaultRepresentationPart->uri = drupal_get_path('theme', 'palmweb_2').'/images/no_picture.png';

		// preferred image size 184px × 144

		$imageMaxExtend = 184;

		$out .= '<div class="preferredImage">'.$defaultRepresentationPart->uri.theme('cdm_preferredImage', $media, $defaultRepresentationPart, $imageMaxExtend).'</div>';

	}

	// description TOC

	$out .= theme('cdm_featureTreeTOCs', $mergedTrees);

	// description

	$out .= theme('cdm_featureTrees', $mergedTrees, $taxon);

	return $out;

}

function theme_cdm_taxon_page_specimens($taxon){

	RenderHints::pushToRenderStack('taxon_page_specimens');

	$specimensOrObersvations = cdm_ws_get(CDM_WS_TAXON, array($taxon->uuid, 'specimensOrObersvations') );

	//collect media (fieldObjectMedia, derivedUnitMedia) and add as fields

	 foreach($specimensOrObersvations as $specimensOrObersvation) {

			$specimensOrObersvation->_fieldObjectMedia = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array($specimensOrObersvation->uuid, 'fieldObjectMedia') );

			$specimensOrObersvation->_derivedUnitMedia = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array($specimensOrObersvation->uuid, 'derivedUnitMedia') );

			//	  	$derivedUnitFacde = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array($descriptionElement->associatedSpecimenOrObservation->uuid) );

			//	  	$descriptionElement->_titleCache = $derivedUnitFacde->titleCache;

	}

	if(variable_get('cdm_dataportal_map_openlayers', 1)){

		$occurrenceQuery = cdm_ws_get(CDM_WS_GEOSERVICE_OCCURRENCEMAP, $taxon->uuid);

		$occurrenceQuery = $occurrenceQuery->String;

		$out .= get_openlayers_map(variable_get('cdm_dataportal_geoservice_display_width', false), $occurrenceQuery);

	}

	if($specimensOrObersvations){

		$out_specimenList = '<table class="specimens">';

		$i = 1;

		foreach($specimensOrObersvations as $specimensOrObersvation) {

			$i++;

				$mediaList = array();

				if(is_array($specimensOrObersvation->_fieldObjectMedia)){

					$mediaList = array_merge($mediaList, $specimensOrObersvation->_fieldObjectMedia);

				}

				if(is_array($specimensOrObersvation->_derivedUnitMedia)){

					$mediaList = array_merge($mediaList, $specimensOrObersvation->_derivedUnitMedia);

				}

				// --- render the title cache

				$out_row = '<tr class="descriptionElement descriptionElement_IndividualsAssociation '.($i%2?'odd':'even').'">';

				if($specimensOrObersvation->class != 'FieldObservation'){

          $label_html = cdm_dynabox($specimensOrObersvation->titleCache,

            cdm_compose_url('portal/'.CDM_WS_DERIVEDUNIT_FACADE, array($specimensOrObersvation->uuid)),

            'cdm_derivedUnitFacade',

            'Click for details',

            array('div', 'div'));

				} else {

				  $label_html = $specimensOrObersvation->titleCache;

				}

				$out_row .= '<td>' . $label_html . '</td>';

				// --- render associated media

				if(count($mediaList) > 0){

					$gallery_settings = getGallerySettings(CDM_DATAPORTAL_SPECIMEN_GALLERY_NAME);

					$gallery_name =  $specimensOrObersvation->uuid;

					$captionElements = array('#uri'=>t('open media'));

					$gallery_html = theme(

	  			    'cdm_media_gallerie',

					$mediaList,

					$gallery_name ,

					$gallery_settings['cdm_dataportal_media_maxextend'],

					$gallery_settings['cdm_dataportal_media_cols'],

					$gallery_settings['cdm_dataportal_media_maxRows'],

					$captionElements, 'LIGHTBOX', null, null);

				} else {

					$gallery_html = '';

				}

				$out_row .= '<td>'.$gallery_html.'</td></tr>';

				$out_specimenList .= $out_row;

		}

		$out_specimenList .= '</table>';

	}

	$out .= $out_specimenList;

	RenderHints::popFromRenderStack();

	return $out;

}

function specimens_search_form() {

	//form select options

	$form['specimens_search_options'] = array(

    '#type' => 'value',

    '#value' => array(t('No sort'), t('Name'), t('CatalogNumber'), t('Gallery'))

	);

	//the form

	$form['specimens_search'] = array(

    '#title' => t('Speciments sort'),

	  '#type' => 'fieldset',

	  '#description' => t('Select your sort criteria.'),

	  '#collapsible' => TRUE,

    '#collapsed' => FALSE

	);

	//criteria

	$form['specimens_search']['first_criteria'] = array(

    '#title' => t('First criteria'),

    '#type' => 'select',

    '#options' => $form['specimens_search_options']['#value']

	);

	$form['specimens_search']['second_criteria'] = array(

    '#title' => t('Second criteria'),

    '#type' => 'select',

    '#options' => $form['specimens_search_options']['#value']

	);

	$form['specimens_search']['third_criteria'] = array(

    '#title' => t('Third criteria'),

    '#type' => 'select',

    '#options' => $form['specimens_search_options']['#value']

	);

	//submit button

	$form['specimens_search']['submit'] = array(

    '#type' => 'submit',

    '#value' => t('Sort')

	);

	/*

	//from properties

	$form['#method'] = 'post';

	$form['#action'] = 'http://example.com/?q=foo/bar';

	$form['#attributes'] = array(

    'enctype' => 'multipart/form-data',

    'target' => 'name_of_target_frame'

	);

	$form['#prefix'] = '<div class="my-form-class">';

	$form['#suffix'] = '</div>';

	*/

	//returning value

	return $form;

}

/**

 * Show whole synonymy for the accepted taxon. Synonymy list is headed by the complete scientific name

 * of the accepted taxon with nomenclatural reference.

 *

 */

function theme_cdm_taxon_page_synonymy($taxon, $addAcceptedTaxon){

	RenderHints::pushToRenderStack('taxon_page_synonymy');

	$synomymie = cdm_ws_get(CDM_WS_PORTAL_TAXON_SYNONYMY, $taxon->uuid);

	$skip = array(UUID_BASIONYM);

	//render full accepted taxon

	if($addAcceptedTaxon){

		if(isset($taxon->name->nomenclaturalReference)){

			$referenceUri = url(path_to_reference($taxon->name->nomenclaturalReference->uuid));

		}

		$accepted_name = theme('cdm_taxonName', $taxon->name, null, $referenceUri);

		$out .= '<span class="accepted-name">';

		$out .= $accepted_name;

        $out .= '</span>';

		$special_annotations_array = array();

		$special_annotations_array[] = $taxon->name;

		$special_annotations_array[] = $taxon;

		$out .= theme('cdm_annotations_as_footnotekeys',

					$special_annotations_array,

					RenderHints::getRenderPath() . '-annotations');

					RenderHints::setFootnoteListKey(RenderHints::getRenderPath() . '-annotations');

	}

	//render accepted taxon homotypic synonymy groups or type desygnations

	//if(!isset($synomymie->homotypicSynonymsByHomotypicGroup[0])){

		//if($addAcceptedTaxon && !isset($synomymie->homotypicSynonymsByHomotypicGroup[0])){

		// display the type information for the added taxon

    //}

    //render accepted taxon homotypic synonymy groups or type desygnations but

	//show only the typedesignations at the homotypic synonymy group

	if (!$synomymie->homotypicSynonymsByHomotypicGroup[0]->name->uuid){

		$typeDesignations = cdm_ws_get(CDM_WS_PORTAL_TAXON_NAMETYPEDESIGNATIONS, $taxon->uuid);

		if($typeDesignations){

			$out .= theme('cdm_typedesignations', $typeDesignations);

			$out .= '<ul class="homotypicSynonyms">' . '</ul>';

		}

	}

    // render the homotypicSynonymyGroup including the type information

	if($synomymie->homotypicSynonymsByHomotypicGroup){

        $out .= theme('cdm_homotypicSynonymyGroup', $synomymie->homotypicSynonymsByHomotypicGroup, $taxon->uuid);

	}

	/*

	else{

		$out .= '<ul class="homotypicSynonyms"></ul>';

	}

	*/

	//render accepted taxon heterotypic synonymy groups

	if($synomymie->heterotypicSynonymyGroups) {

		foreach($synomymie->heterotypicSynonymyGroups as $homotypicalGroup){

			$out .= theme('cdm_heterotypicSynonymyGroup', $homotypicalGroup);

		}

	}

	//render taxon relationships

	if(variable_get(CDM_DATAPORTAL_DISPLAY_TAXON_RELATIONSHIPS, CDM_DATAPORTAL_DISPLAY_TAXON_RELATIONSHIPS_DEFAULT)){

		$taxonRelationships = cdm_ws_get(CDM_WS_PORTAL_TAXON_RELATIONS, $taxon->uuid);

		$out .= theme('cdm_taxonRelationships', $taxonRelationships);

	}

	//render name relationships

	$name_rels_to_show = variable_get('name_relationships_to_show', null);

	$skip = array();

	if($name_rels_to_show){

		foreach ($name_rels_to_show as $key => $value){

			if ($value === 0){

				$skip[] = $key;

			}

		}

		if (sizeof($name_rels_to_show) != sizeof($skip)){

			$nameRelationships = cdm_ws_get(CDM_WS_PORTAL_TAXON_TO_NAMERELATIONS, $taxon->uuid);

			$out .= theme('cdm_nameRelationships', $nameRelationships, $skip);

		}

	}

	/*

	 if(variable_get(CDM_DATAPORTAL_DISPLAY_NAME_RELATIONSHIPS, CDM_DATAPORTAL_DISPLAY_NAME_RELATIONSHIPS_DEFAULT)){

	 $nameRelationships = cdm_ws_get(CDM_WS_PORTAL_TAXON_TO_NAMERELATIONS, $taxon->uuid);

	 // TODO is it correct to skip relationsFromThisName since all relationships are to be understood as 'is .... of'

	 if(variable_get('cdm_dataportal_name_relations_skiptype_basionym', 1)){

	 $skip = array(UUID_BASIONYM);

	 }

	 $out .= theme('cdm_nameRelationships', $nameRelationships, $skip);

	 }

	 */

	//render the annontations text for the accepted taxa

	if ($addAcceptedTaxon){

		$out .= theme('cdm_footnotes', RenderHints::getRenderPath() . '-annotations', 'li');

	}

	RenderHints::popFromRenderStack();

	return $out;

}

/**

 * TODO Implementation of Hook taxon_image_gallery()

 *

 * @param unknown_type $taxon

 * @param unknown_type $media

 * @return unknown_type

 */

function taxon_image_gallery_default($taxon, $media){

	$hasImages = isset($media[0]);

	if($hasImages){

		//

		$maxExtend = 150;

		$cols = 3;

		$maxRows = false;

		$alternativeMediaUri = null;

		$captionElements = array('title', 'rights', '#uri'=>t('open Image'));

		$gallery_name = $taxon->uuid;

		$mediaLinkType = 'LIGHTBOX';

		//$gallery_settings = getGallerySettings(CDM_DATAPORTAL_MEDIA_GALLERY_NAME);

		$gallery_settings = getGallerySettings(CDM_DATAPORTAL_TAXON_MEDIA_GALLERY_NAME_TAB);

		$out = '<div class="image-gallerie">';

		$out .= theme('cdm_media_gallerie', 

		  $media,

		  $gallery_name,

		  $gallery_settings['cdm_dataportal_media_maxextend'],

		  $gallery_settings['cdm_dataportal_media_cols'],

		  0, // ignore maxrows settings

		  $captionElements,

		  $mediaLinkType,

		  null,

		  null,

		  $gallery_settings['cdm_dataportal_show_thumbnail_captions']);

		  $out .= '</div>';

	}else{

		$out = 'No images available.';

	}

	return $out;

}

/**

 * TODO Implementation of Hook taxon_image_gallery()

 *

 * @param unknown_type $taxon

 * @param unknown_type $media

 * @return unknown_type

 */

function taxon_image_gallery_fsi($taxon, $media){

	$flashLink = isset($media[0]);

	if($flashLink){

		$taggedName = $taxon->name->taggedName;

		$nameArray = array();

		foreach($taggedName as $taggedText){

			if($taggedText->type == 'name'){

				$nameArray[] = $taggedText->text;

			}

		}

		$query = join("%5F", $nameArray) . '%20AND%20EditWP6%20AND%20jpg';

		$out = '

<script type="text/javascript" src="http://media.bgbm.org/erez/js/fsiwriter.js"></script>

<script type="text/javascript">

<!--

  writeFlashCode( "http://media.bgbm.org/erez/fsi/fsi.swf?&cfg=showcase_presets/showcase_info.fsi&effects=%26quality%3D95&showcase_query='.$query.'&skin=silver&showcase_labeltextheight=50&textbox_textfrom=IPTC_WP6&textbox_height=50&param_backgroundcolor=454343&publishwmode=opaque&showcase_hscroll=true&showcase_basecolor=454343&plugins=textbox,fullscreen",

    "http://media.bgbm.org/erez/erez?src=erez-private/flashrequired.svg&tmp=Large&quality=97&width=620&height=400",

    "width=620;height=400;bgcolor=454343;wmode=opaque");

// -->

</script>

<noscript>

  <object classid="clsid:D27CDB6E-AE6D-11cf-96B8-444553540000" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,65,0" width="470" height="400">

    <param name="movie" value="http://media.bgbm.org/erez/fsi/fsi.swf?&cfg=showcase_presets/showcase_info.fsi&effects=%26quality%3D95&showcase_query='.$query.'&skin=silver&showcase_labeltextheight=50&textbox_textfrom=IPTC_WP6&textbox_height=50&param_backgroundcolor=454343&publishwmode=opaque&showcase_hscroll=true&showcase_basecolor=454343plugins=textbox,fullscreen"/>

    <param name="bgcolor" value="454343" />

    <param name="wmode" value="opaque" />

    <param name="allowscriptaccess" value="always" />

    <param name="allowfullscreen" value="true" />

    <param name="quality" value="high" />

    <embed src="http://media.bgbm.org/erez/fsi/fsi.swf?&cfg=showcase_presets/showcase_info.fsi&effects=%26quality%3D95&showcase_query='.$query.'&skin=silver&showcase_labeltextheight=50&textbox_textfrom=IPTC_WP6&textbox_height=50&param_backgroundcolor=454343&publishwmode=opaque&showcase_hscroll=true&showcase_basecolor=454343plugins=PrintSave,textbox,fullscreen"

      width="620"

      height="400"

      bgcolor="454343"

      wmode="opaque"

      allowscriptaccess="always"

      allowfullscreen="true"

      quality="high"

      type="application/x-shockwave-flash"

      pluginspage="http://www.adobe.com/go/getflashplayer">

    </embed>

  </object>

</noscript>';

	}else{

		$out = 'No images available.';

	}

	return $out;

}

/**

 * Show a reference in it's atomized form

 */

function theme_cdm_reference_page($referenceTO){

	/*

	 if($referenceTO->titleCache) {

		drupal_set_title($referenceTO->titleCache);

		} else {

		drupal_set_title($referenceTO->fullCitation);

		}

		*/

	$field_order = array(

    "title",

	//"titleCache",

	//"citation",

    "authorTeam",

    "editor",

    "publisher",

    "placePublished",

    "datePublished",

    "year",

    "edition",      // class Book

    "volume",       // class Article

    "seriesPart",

    "inReference",

	//"inJournal",     // class Article

	//"inBook",        // class BookSection

    "nomRefBase",    // class BookSection, Book, Article

	//"inProceedings", // class InProceedings

    "pages",         // class Article

    "series",        // class Article, PrintSeries

    "school",        // class Thesis

    "institution",   // class Report

    "organization",  // class Proceedings

    "nextVersion",

    "previousVersion",

    "isbn",         // class Book

    "issn",         // class Journal

    "uri",

	);

	/*

	 $table_rows = array();

	 foreach($field_order as $fieldname){

		if(isset($referenceTO->$fieldname)){

		if($fieldname == "datePublished") {

		$partial = $referenceTO->$fieldname;

		$datePublished = '';

		if($partial->start){

		//var_dump ($partial->start);

		$datePublishedYear = substr($partial->start, 0, 4);

		$datePublishedMonth = substr($partial->start, 5, 2);

		if (!(preg_match('#[0-9]#',$datePublishedMonth))){

		$datePublishedMonth = '00';

		}

		$datePublishedDay = substr($partial->start, 7, 2);

		if (!(preg_match('#[0-9]#',$datePublishedDay))){

		$datePublishedDay = '00';

		}

		$datePublished = $datePublishedYear.'-'.$datePublishedMonth.'-'.$datePublishedDay;

		}

		if($partial->end){

		$datePublished = (strlen($datePublished) > 0 ? ' '.t('to').' ' : '').substr($partial->end, 0, 4).'-'.substr($partial->end, 4, 2).'-'.substr($partial->end, 6, 2);

		}

		$table_rows[] = array(t(ucfirst(strtolower($fieldname))), $datePublished);

		//$datePublished = array(t(ucfirst(strtolower($fieldname))), $datePublished);

		} else if(is_object($referenceTO->$fieldname)){

		if ($fieldname == "authorTeam"){

		$dump = $referenceTO->$fieldname;

		$teammembers = "teamMembers";

		$team = $dump->$teammembers;

		$nameArray = array();

		foreach($team as $member){

		if (strlen($member->lastname)> 0){

		$nname = $member->lastname;

		$name = $nname;

		if (strlen($member->firstname)> 0){

		$vname = $member->firstname;

		$name =$vname." ". $nname;

		}

		$nameArray[] =$name;

		}else{

		if (strlen($member->titleCache)> 0){

		$nameArray[] = $member->titleCache;

		}

		}

		}

		$names = join($nameArray, ", ");

		}else if ($fieldname == "inReference"){

		$type = $referenceTO ->$fieldname-> type;

		$names = $referenceTO-> $fieldname-> titleCache;

		switch ($type) {

		case "Book":

		$fieldname = "in book";

		break;

		case "Journal":

		$fieldname = "in journal";

		break;

		case "Proceedings":

		$fieldname = "in proceedings";

		break;

		}

		}else{

		$names = $referenceTO->$fieldname-> titleCache;

		}

		$table_rows[] = array(t(ucfirst(strtolower($fieldname))), $names);

		//$name = array(t(ucfirst(strtolower($fieldname))), $names);

		} else {

		$table_rows[] = array(t(ucfirst(strtolower($fieldname))), $referenceTO->$fieldname);

		//$name = array(t(ucfirst(strtolower($fieldname))), $referenceTO->$fieldname);

		}

		}

		}

		*/

	//select the type of the reference and find the in Reference attribute

	$referenceData = array(

    "title" => NULL,

	//"titleCache",

	//"citation",

    "authorTeam" => NULL,

    "editor" => NULL,

    "publisher" => NULL,

    "placePublished" => NULL,

    "datePublished" => NULL,

    "year" => NULL,

    "edition" => NULL,      // class Book

    "volume" => NULL,       // class Article

    "seriesPart" => NULL,

    "inReference" => NULL,

	//"inJournal",     // class Article

	//"inBook",        // class BookSection

    "nomRefBase" => NULL,    // class BookSection, Book, Article

	//"inProceedings", // class InProceedings

    "pages" => NULL,         // class Article

    "series" => NULL,        // class Article, PrintSeries

    "school" => NULL,        // class Thesis

    "institution" => NULL,   // class Report

    "organization" => NULL,  // class Proceedings

    "nextVersion" => NULL,

    "previousVersion" => NULL,

    "isbn" => NULL,         // class Book

    "issn" => NULL,         // class Journal

    "uri" => NULL,

	);

	foreach($field_order as $fieldname){

		if(isset($referenceTO->$fieldname)){

			switch($fieldname){

				case "datePublished":

					$partial = $referenceTO->$fieldname;

					$datePublished = '';

					if($partial->start){

						$datePublishedYear = substr($partial->start, 0, 4);

						$datePublishedMonth = substr($partial->start, 5, 2);

						if (!(preg_match('#[0-9]#',$datePublishedMonth))){

							$datePublishedMonth = '00';

						}

						$datePublishedDay = substr($partial->start, 7, 2);

						if (!(preg_match('#[0-9]#',$datePublishedDay))){

							$datePublishedDay = '00';

						}

						$datePublished = $datePublishedYear.'-'.$datePublishedMonth.'-'.$datePublishedDay;

					}

					if($partial->end){

						$datePublished = (strlen($datePublished) > 0 ? ' '.t('to').' ' : '').substr($partial->end, 0, 4).'-'.substr($partial->end, 4, 2).'-'.substr($partial->end, 6, 2);

					}

					$referenceData[$fieldname] = $datePublishedYear;

					break;

				default:

					if(is_object($referenceTO->$fieldname)){

						if ($fieldname == "authorTeam"){

							$dump = $referenceTO->$fieldname;

							$teammembers = "teamMembers";

							$team = $dump->$teammembers;

							$nameArray = array();

							foreach($team as $member){

								if (strlen($member->lastname)> 0){

									$nname = $member->lastname;

									$name = $nname;

									if (strlen($member->firstname)> 0){

										$vname = $member->firstname;

										$name =$vname." ". $nname;

									}

									$nameArray[] =$name;

								}else{

									if (strlen($member->titleCache)> 0){

										$nameArray[] = $member->titleCache;

									}

								}

							}

							$names = join($nameArray, ", ");

							$referenceData[$fieldname] = $names;

						}else if ($fieldname == "inReference"){

							$names = $referenceTO->$fieldname->titleCache;

							$referenceData[$fieldname] = $names;

						}else{

							$names = $referenceTO->$fieldname->titleCache;

							$referenceData[$fieldname] = $names;

						}

					}else{

						$referenceData[$fieldname] = $referenceTO->$fieldname;

					}

			}

		}

	}

	$author_team =  cdm_ws_get(CDM_WS_REFERENCE_AUTHORTEAM, $referenceTO->uuid);

	//return "" . ((strlen($referenceData["authorTeam"])>0) ? ($referenceData["authorTeam"] . '. ') : '')

	return "" . ((strlen($author_team->titleCache)>0) ? ($author_team->titleCache . '. ') : '')

	. ((strlen($referenceData["datePublished"])>0) ? ($referenceData["datePublished"] . '. ') : '')

	. ((strlen($referenceData["title"])>0) ? ($referenceData["title"] . '. ') : "")

	. ((strlen($referenceData["placePublished"])>0) ? ($referenceData["placePublished"] . '. ') : '')

	. ((strlen($referenceData["editor"])>0) ? ($referenceData["editor"] . '. ') : '')

	. ((strlen($referenceData["publisher"])>0) ? ($referenceData["publisher"] . '. ') : '')

	. ((strlen($referenceData["inReference"])>0) ? ($referenceData["inReference"] . '. ') : '')

	. ((strlen($referenceData["series"])>0) ? ($referenceData["series"] . '. ') : '')

	. ((strlen($referenceData["volume"])>0) ? ($referenceData["volume"] . '. ') : '')

	. ((strlen($referenceData["pages"])>0) ? ($referenceData["pages"] . '. ') : '')

	. ((strlen($referenceData["isbn"])>0) ? ($referenceData["isbn"] . '. ') : '')

	. ((strlen($referenceData["issn"])>0) ? ($referenceData["issn"] . '. ') : '')

	. ((strlen($referenceData["uri"])>0) ? ($referenceData["uri"] . '. ') : '');

}

function theme_cdm_media_page($media, $mediarepresentation_uuid = false, $partId = false){

	$out = '';

	// determine which reprresentation and which part to show

	$representationIdx = 0;

	if($mediarepresentation_uuid){

		$i = 0;

		foreach($media->representations as $representation) {

			if($representation->uuid == $mediarepresentation_uuid){

				$representationIdx = $i;

			}

			$i++;

		}

	} else {

		$mediarepresentation_uuid = $media->representations[0]->uuid;

	}

	$partIdx  = 0;

	if(!is_numeric($partId)){

		// assuming it is an uuid

		$i = 0;

		foreach($media->representations[$representationIdx]->parts as $part) {

			if($part->uuid == $partId){

				$partIdx = $i;

			}

			$i++;

		}

	} else {

		// assuming it is an index

		$partIdx = $partId;

	}

	$media_metadata = cdm_read_media_metadata($media);

	//$title = $media->titleCache;

	$title = $media_metadata['title'];

	$imageMaxExtend = variable_get('image-page-maxextend', 400);

	if(!$title){

		$title = 'Media '.$media->uuid.'';

	}

	drupal_set_title($title);

	$out .= '<div class="media">';

	//$out .= '<div class="viewer">';

	$out .= theme(cdm_back_to_image_gallery_button);

	$out .= '<div class="viewer">';

	//$out .= theme('cdm_media_gallerie_image', $representation->parts[$partIdx], $imageMaxExtend);

	$out .= theme('cdm_openlayers_image', $media->representations[$representationIdx]->parts[$partIdx], $imageMaxExtend);

	$out .= '</div>';

	// general media metadata

	//$media_metadata = cdm_ws_get(CDM_WS_MEDIA_METADATA, array($media->uuid));

	//vardump("PRINTING MEDIA METADATA");

	//vardump($media_metadata);

	//vardump("PRINTING MEDIA");

	//vardump($media);

	$metadataToPrint = theme('cdm_media_caption', $media);

	$out .= $metadataToPrint;

	//tabs for the different representations

	//ul.secondary

	$out .= '<ul class="primary">';

	foreach($media->representations as $representation){

		$out .= '<li>'.l($media->representations[$representationIdx]->mimeType, path_to_media($media->uuid, $mediarepresentation_uuid, $partIdx)).'</li>';