/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.editor.name.operation;
-import junit.framework.Assert;
-
import org.apache.log4j.Logger;
import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
import org.junit.BeforeClass;
import org.junit.Test;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.Synonym;
-import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
+import eu.etaxonomy.cdm.model.taxon.SynonymType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
-import eu.etaxonomy.taxeditor.editor.name.operation.SwapSynonymAndAcceptedOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.store.operations.AbstractTaxeditorOperationTestBase;
/**
* @author n.hoffmann
* @created 02.04.2009
- * @version 1.0
*/
public class SwapSynonymAndAcceptedOperationTest extends AbstractTaxeditorOperationTestBase {
private static final Logger logger = Logger
.getLogger(SwapSynonymAndAcceptedOperationTest.class);
-
+
private static AbstractPostOperation operation;
private static Taxon taxon;
private static NonViralName<?> oldTaxonName;
-
+
/**
* @throws java.lang.Exception
*/
@BeforeClass
public static void setUpBeforeClass() throws Exception {
-
+
(new DefaultTermInitializer()).initialize();
-
+
// Create the original accepted taxon
oldTaxonName = NonViralName.NewInstance(null);
taxon = Taxon.NewInstance(oldTaxonName, null);
-
- // Create its parent taxon
- parentTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
- parentTaxon.addTaxonomicChild(taxon, null, null);
-
- // Give it a child taxon
- childTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
- childTaxon.setTaxonomicParent(taxon, null, null);
-
+
+// // Create its parent taxon
+// parentTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
+// parentTaxon.addTaxonomicChild(taxon, null, null);
+//
+// // Give it a child taxon
+// childTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
+// childTaxon.setTaxonomicParent(taxon, null, null);
+
// Create a homotypic synonym for the accepted taxon
- taxon.addHomotypicSynonymName(NonViralName.NewInstance(null), null, null);
+ taxon.addHomotypicSynonymName(NonViralName.NewInstance(null));
// homotypicSynonym = Synonym.NewInstance(NonViralName.NewInstance(null), null);
// HomotypicalGroup acceptedHomotypicalGroup = HomotypicalGroup.NewInstance();
// acceptedHomotypicalGroup.addTypifiedName(oldTaxon.getName());
// acceptedHomotypicalGroup.addTypifiedName(homotypicSynonym.getName());
-
+
// Create a heterotypic synonym that will be used to create the new accepted taxon
oldSynonymName = NonViralName.NewInstance(null);
oldHeterotypicSynonym = Synonym.NewInstance(oldSynonymName, null);
// oldTaxon.addS .addHeterotypicSynonym(oldHeterotypicSynonym, null, null);
heteroypicalGroup = HomotypicalGroup.NewInstance();
heteroypicalGroup.addTypifiedName(oldHeterotypicSynonym.getName());
- taxon.addSynonym(oldHeterotypicSynonym, SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF());
-
+ taxon.addSynonym(oldHeterotypicSynonym, SynonymType.HETEROTYPIC_SYNONYM_OF());
+
// Create a misapplication
misapplication = Taxon.NewInstance(NonViralName.NewInstance(null), null);
- taxon.addMisappliedName(misapplication, null, null);
-
+ taxon.addMisappliedName(misapplication, null, null);
+
// Create a concept relation
concept = Taxon.NewInstance(NonViralName.NewInstance(null), null);
conceptRelationshipType = TaxonRelationshipType.CONGRUENT_TO();
- concept.addTaxonRelation(taxon, conceptRelationshipType, null, null);
-
+ concept.addTaxonRelation(taxon, conceptRelationshipType, null, null);
+
// Create a description
description = TaxonDescription.NewInstance();
taxon.addDescription(description);
-
+
operation = new SwapSynonymAndAcceptedOperation
- (null, undoContext, taxon, oldHeterotypicSynonym, postOperation);
+ (null, undoContext, taxon, oldHeterotypicSynonym, postOperation, cdmEntitySessionEnabled);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testExecute() throws ExecutionException {
operation.execute(null, null);
-
- // New taxon has correct name?
+
+ // New taxon has correct name?
Assert.assertEquals(taxon.getName(), oldSynonymName);
-
- // New taxon has correct parent?
- Assert.assertEquals(taxon.getTaxonomicParent(), parentTaxon);
-
- // New taxon has correct child?
- Assert.assertTrue(taxon.getTaxonomicChildren().contains(childTaxon));
-
+
+// // New taxon has correct parent?
+// Assert.assertEquals(taxon.getTaxonomicParent(), parentTaxon);
+//
+// // New taxon has correct child?
+// Assert.assertTrue(taxon.getTaxonomicChildren().contains(childTaxon));
+
// New taxon has 2 synonyms?
Assert.assertEquals(taxon.getSynonyms().size(), 2);
-
+
// New taxon has a synonym with the name of the previous accepted taxon?
Assert.assertTrue(taxon.getSynonymNames().contains(oldTaxonName));
-
+
// New taxon has misapplication?
Assert.assertTrue(taxon.getMisappliedNames().contains(misapplication));
-
- // New taxon has 1 concept relation?
- int conceptRelCount = 0;
- for (TaxonRelationship relation : taxon.getTaxonRelations()) {
- if (relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR()) ||
- relation.getType().equals(TaxonRelationshipType.TAXONOMICALLY_INCLUDED_IN())) {
- continue;
- }
- conceptRelCount++;
- }
- Assert.assertEquals(conceptRelCount, 1);
-
+
+// // New taxon has 1 concept relation?
+// int conceptRelCount = 0;
+// for (TaxonRelationship relation : taxon.getTaxonRelations()) {
+// if (relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR()) ||
+// relation.getType().equals(TaxonRelationshipType.TAXONOMICALLY_INCLUDED_IN())) {
+// continue;
+// }
+// conceptRelCount++;
+// }
+// Assert.assertEquals(conceptRelCount, 1);
+
// New taxon has description?
taxon.getDescriptions().contains(description);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndo() throws ExecutionException {
operation.undo(null, null);
-
+
// Assert.assertEquals(oldHomotypicalGroup, synonym.getHomotypicGroup());
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedo() throws ExecutionException {
operation.redo(null, null);
-
+
// Assert.assertEquals(newHomotypicalGroup, synonym.getHomotypicGroup());
}
/**
- * Test method for {@link eu.etaxonomy.taxeditor.operation.AbstractPostOperation#postExecute(ICdmBase)}.
+ * Test method for {@link eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation#postExecute(ICdmBase)}.
*/
@Test
public void testPostExecute() {
BGBM BDI Projects / taxeditor.git / blobdiff