3 * Copyright (C) 2013 EDIT
4 * European Distributed Institute of Taxonomy
5 * http://www.e-taxonomy.eu
7 * The contents of this file are subject to the Mozilla Public License Version 1.1
8 * See LICENSE.TXT at the top of this package for the full license terms.
10 package eu
.etaxonomy
.taxeditor
.dataimport
.transientServices
;
12 import java
.io
.IOException
;
13 import java
.util
.ArrayList
;
14 import java
.util
.Collection
;
15 import java
.util
.List
;
18 import java
.util
.UUID
;
20 import org
.apache
.lucene
.index
.CorruptIndexException
;
21 import org
.apache
.lucene
.queryParser
.ParseException
;
22 import org
.hibernate
.LockMode
;
23 import org
.hibernate
.Session
;
24 import org
.hibernate
.criterion
.Criterion
;
25 import org
.hibernate
.envers
.query
.criteria
.AuditCriterion
;
26 import org
.hibernate
.search
.spatial
.impl
.Rectangle
;
28 import eu
.etaxonomy
.cdm
.api
.facade
.DerivedUnitFacade
;
29 import eu
.etaxonomy
.cdm
.api
.facade
.DerivedUnitFacadeNotSupportedException
;
30 import eu
.etaxonomy
.cdm
.api
.service
.IOccurrenceService
;
31 import eu
.etaxonomy
.cdm
.api
.service
.config
.IIdentifiableEntityServiceConfigurator
;
32 import eu
.etaxonomy
.cdm
.api
.service
.exception
.ReferencedObjectUndeletableException
;
33 import eu
.etaxonomy
.cdm
.api
.service
.pager
.Pager
;
34 import eu
.etaxonomy
.cdm
.api
.service
.search
.SearchResult
;
35 import eu
.etaxonomy
.cdm
.api
.service
.util
.TaxonRelationshipEdge
;
36 import eu
.etaxonomy
.cdm
.common
.monitor
.IProgressMonitor
;
37 import eu
.etaxonomy
.cdm
.model
.common
.Annotation
;
38 import eu
.etaxonomy
.cdm
.model
.common
.ISourceable
;
39 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableSource
;
40 import eu
.etaxonomy
.cdm
.model
.common
.LSID
;
41 import eu
.etaxonomy
.cdm
.model
.common
.Language
;
42 import eu
.etaxonomy
.cdm
.model
.common
.Marker
;
43 import eu
.etaxonomy
.cdm
.model
.common
.MarkerType
;
44 import eu
.etaxonomy
.cdm
.model
.common
.UuidAndTitleCache
;
45 import eu
.etaxonomy
.cdm
.model
.description
.DescriptionBase
;
46 import eu
.etaxonomy
.cdm
.model
.location
.Country
;
47 import eu
.etaxonomy
.cdm
.model
.media
.Media
;
48 import eu
.etaxonomy
.cdm
.model
.media
.Rights
;
49 import eu
.etaxonomy
.cdm
.model
.occurrence
.DerivationEvent
;
50 import eu
.etaxonomy
.cdm
.model
.occurrence
.DerivedUnit
;
51 import eu
.etaxonomy
.cdm
.model
.occurrence
.DeterminationEvent
;
52 import eu
.etaxonomy
.cdm
.model
.occurrence
.FieldUnit
;
53 import eu
.etaxonomy
.cdm
.model
.occurrence
.SpecimenOrObservationBase
;
54 import eu
.etaxonomy
.cdm
.model
.taxon
.Taxon
;
55 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonBase
;
56 import eu
.etaxonomy
.cdm
.model
.view
.AuditEvent
;
57 import eu
.etaxonomy
.cdm
.model
.view
.AuditEventRecord
;
58 import eu
.etaxonomy
.cdm
.persistence
.dao
.common
.AuditEventSort
;
59 import eu
.etaxonomy
.cdm
.persistence
.query
.Grouping
;
60 import eu
.etaxonomy
.cdm
.persistence
.query
.MatchMode
;
61 import eu
.etaxonomy
.cdm
.persistence
.query
.OrderHint
;
62 import eu
.etaxonomy
.cdm
.strategy
.cache
.common
.IIdentifiableEntityCacheStrategy
;
63 import eu
.etaxonomy
.cdm
.strategy
.match
.IMatchStrategy
;
64 import eu
.etaxonomy
.cdm
.strategy
.merge
.IMergeStrategy
;
71 public class TransientOccurenceService
implements IOccurrenceService
{
73 private IOccurrenceService defaultService
;
74 private List
<SpecimenOrObservationBase
> units
;
77 * @param defaultService
79 public TransientOccurenceService(IOccurrenceService defaultService
) {
80 this.defaultService
= defaultService
;
81 this.units
= new ArrayList
<SpecimenOrObservationBase
>();
89 * @param propertyPaths
91 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(eu.etaxonomy.cdm.model.common.VersionableEntity, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
94 public Pager
<AuditEventRecord
<SpecimenOrObservationBase
>> pageAuditEvents(SpecimenOrObservationBase t
, Integer pageSize
, Integer pageNumber
, AuditEventSort sort
, List
<String
> propertyPaths
) {
95 return defaultService
.pageAuditEvents(t
, pageSize
, pageNumber
, sort
, propertyPaths
);
104 * @param propertyPaths
106 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getAnnotations(eu.etaxonomy.cdm.model.common.AnnotatableEntity, eu.etaxonomy.cdm.model.common.MarkerType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
109 public Pager
<Annotation
> getAnnotations(SpecimenOrObservationBase annotatedObj
, MarkerType status
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
110 return defaultService
.getAnnotations(annotatedObj
, status
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
115 * @see eu.etaxonomy.cdm.api.service.IService#clear()
118 public void clear() {
119 defaultService
.clear();
125 * @see eu.etaxonomy.cdm.api.service.IService#lock(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode)
128 public void lock(SpecimenOrObservationBase t
, LockMode lockMode
) {
129 defaultService
.lock(t
, lockMode
);
135 * @param propertyPaths
136 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode, java.util.List)
139 public void refresh(SpecimenOrObservationBase t
, LockMode lockMode
, List
<String
> propertyPaths
) {
140 defaultService
.refresh(t
, lockMode
, propertyPaths
);
145 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache()
148 public void updateTitleCache() {
149 defaultService
.updateTitleCache();
155 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getNextAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
158 public AuditEventRecord
<SpecimenOrObservationBase
> getNextAuditEvent(SpecimenOrObservationBase t
) {
159 return defaultService
.getNextAuditEvent(t
);
163 * @param annotatableEntity
168 * @param propertyPaths
170 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getMarkers(eu.etaxonomy.cdm.model.common.AnnotatableEntity, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
173 public Pager
<Marker
> getMarkers(SpecimenOrObservationBase annotatableEntity
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
174 return defaultService
.getMarkers(annotatableEntity
, technical
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
180 * @param cacheStrategy
182 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Class, java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy, eu.etaxonomy.cdm.common.monitor.IProgressMonitor)
185 public void updateTitleCache(Class
<?
extends SpecimenOrObservationBase
> clazz
, Integer stepSize
, IIdentifiableEntityCacheStrategy
<SpecimenOrObservationBase
> cacheStrategy
, IProgressMonitor monitor
) {
186 defaultService
.updateTitleCache(clazz
, stepSize
, cacheStrategy
, monitor
);
192 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getPreviousAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
195 public AuditEventRecord
<SpecimenOrObservationBase
> getPreviousAuditEvent(SpecimenOrObservationBase t
) {
196 return defaultService
.getPreviousAuditEvent(t
);
202 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getCountryByIso(java.lang.String)
205 public Country
getCountryByIso(String iso639
) {
206 return defaultService
.getCountryByIso(iso639
);
212 * @see eu.etaxonomy.cdm.api.service.IService#count(java.lang.Class)
215 public int count(Class
<?
extends SpecimenOrObservationBase
> clazz
) {
216 return defaultService
.count(clazz
);
222 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getCountryByName(java.lang.String)
225 public List
<Country
> getCountryByName(String name
) {
226 return defaultService
.getCountryByName(name
);
231 * @param determinedAs
235 * @param propertyPaths
237 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#list(java.lang.Class, eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
240 public Pager
<SpecimenOrObservationBase
> list(Class
<?
extends SpecimenOrObservationBase
> type
, TaxonBase determinedAs
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
241 return defaultService
.list(type
, determinedAs
, limit
, start
, orderHints
, propertyPaths
);
252 * @param propertyPaths
254 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(java.lang.Class, eu.etaxonomy.cdm.model.view.AuditEvent, eu.etaxonomy.cdm.model.view.AuditEvent, java.util.List, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
257 public Pager
<AuditEventRecord
<SpecimenOrObservationBase
>> pageAuditEvents(Class
<?
extends SpecimenOrObservationBase
> clazz
, AuditEvent from
, AuditEvent to
, List
<AuditCriterion
> criteria
, Integer pageSize
, Integer pageValue
, AuditEventSort sort
, List
<String
> propertyPaths
) {
258 return defaultService
.pageAuditEvents(clazz
, from
, to
, criteria
, pageSize
, pageValue
, sort
, propertyPaths
);
264 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#find(eu.etaxonomy.cdm.model.common.LSID)
267 public SpecimenOrObservationBase
find(LSID lsid
) {
268 return defaultService
.find(lsid
);
272 * @param persistentObject
274 * @see eu.etaxonomy.cdm.api.service.IService#delete(eu.etaxonomy.cdm.model.common.ICdmBase)
277 public UUID
delete(SpecimenOrObservationBase persistentObject
) throws ReferencedObjectUndeletableException
{
278 return defaultService
.delete(persistentObject
);
286 * @param propertyPaths
288 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#groupMarkers(java.lang.Class, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List)
291 public List
<Object
[]> groupMarkers(Class
<?
extends SpecimenOrObservationBase
> clazz
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
292 return defaultService
.groupMarkers(clazz
, technical
, pageSize
, pageNumber
, propertyPaths
);
298 * @see eu.etaxonomy.cdm.api.service.IService#exists(java.util.UUID)
301 public boolean exists(UUID uuid
) {
302 return defaultService
.exists(uuid
);
309 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#replace(eu.etaxonomy.cdm.model.common.IdentifiableEntity, eu.etaxonomy.cdm.model.common.IdentifiableEntity)
312 public SpecimenOrObservationBase
replace(SpecimenOrObservationBase x
, SpecimenOrObservationBase y
) {
313 return defaultService
.replace(x
, y
);
319 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.Set)
322 public List
<SpecimenOrObservationBase
> find(Set
<UUID
> uuidSet
) {
323 return defaultService
.find(uuidSet
);
330 * @param propertyPaths
332 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSources(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
335 public Pager
<IdentifiableSource
> getSources(SpecimenOrObservationBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
336 return defaultService
.getSources(t
, pageSize
, pageNumber
, propertyPaths
);
342 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.UUID)
345 public SpecimenOrObservationBase
find(UUID uuid
) {
346 return defaultService
.find(uuid
);
352 * @see eu.etaxonomy.cdm.api.service.IService#find(int)
355 public SpecimenOrObservationBase
find(int id
) {
356 return defaultService
.find(id
);
363 * @param propertyPaths
365 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getRights(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
368 public Pager
<Rights
> getRights(SpecimenOrObservationBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
369 return defaultService
.getRights(t
, pageSize
, pageNumber
, propertyPaths
);
376 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#countMarkers(java.lang.Class, java.lang.Boolean)
379 public int countMarkers(Class
<?
extends SpecimenOrObservationBase
> clazz
, Boolean technical
) {
380 return defaultService
.countMarkers(clazz
, technical
);
387 * @param propertyPaths
389 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getMedia(eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase, java.lang.Integer, java.lang.Integer, java.util.List)
392 public Pager
<Media
> getMedia(SpecimenOrObservationBase occurence
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
393 return defaultService
.getMedia(occurence
, pageSize
, pageNumber
, propertyPaths
);
399 * @see eu.etaxonomy.cdm.api.service.IService#findById(java.util.Set)
402 public List
<SpecimenOrObservationBase
> findById(Set
<Integer
> idSet
) {
403 return defaultService
.findById(idSet
);
411 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSourcedObjectByIdInSource(java.lang.Class, java.lang.String, java.lang.String)
414 public ISourceable
getSourcedObjectByIdInSource(Class clazz
, String idInSource
, String idNamespace
) {
415 return defaultService
.getSourcedObjectByIdInSource(clazz
, idInSource
, idNamespace
);
420 * @see eu.etaxonomy.cdm.api.service.IService#getSession()
423 public Session
getSession() {
424 return defaultService
.getSession();
429 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getUuidAndTitleCache()
432 public List
<UuidAndTitleCache
<SpecimenOrObservationBase
>> getUuidAndTitleCache() {
433 return defaultService
.getUuidAndTitleCache();
441 * @param propertyPaths
443 * @see eu.etaxonomy.cdm.api.service.IService#group(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
446 public List
<Object
[]> group(Class
<?
extends SpecimenOrObservationBase
> clazz
, Integer limit
, Integer start
, List
<Grouping
> groups
, List
<String
> propertyPaths
) {
447 return defaultService
.group(clazz
, limit
, start
, groups
, propertyPaths
);
455 * @param propertyPaths
457 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDeterminations(eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase, eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List)
460 public Pager
<DeterminationEvent
> getDeterminations(SpecimenOrObservationBase occurence
, TaxonBase taxonBase
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
461 return defaultService
.getDeterminations(occurence
, taxonBase
, pageSize
, pageNumber
, propertyPaths
);
472 * @param propertyPaths
474 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
477 public Pager
<SpecimenOrObservationBase
> findByTitle(Class
<?
extends SpecimenOrObservationBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
478 return defaultService
.findByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
485 * @param propertyPaths
487 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDerivationEvents(eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase, java.lang.Integer, java.lang.Integer, java.util.List)
490 public Pager
<DerivationEvent
> getDerivationEvents(SpecimenOrObservationBase occurence
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
491 return defaultService
.getDerivationEvents(occurence
, pageSize
, pageNumber
, propertyPaths
);
499 * @param propertyPaths
501 * @see eu.etaxonomy.cdm.api.service.IService#list(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
504 public List
<SpecimenOrObservationBase
> list(Class
<?
extends SpecimenOrObservationBase
> type
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
505 return defaultService
.list(type
, limit
, start
, orderHints
, propertyPaths
);
514 * @param propertyPaths
516 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#search(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
519 public Pager
<SpecimenOrObservationBase
> search(Class
<?
extends SpecimenOrObservationBase
> clazz
, String query
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
520 return defaultService
.search(clazz
, query
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
524 * @param configurator
526 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
529 public Pager
<SpecimenOrObservationBase
> findByTitle(IIdentifiableEntityServiceConfigurator
<SpecimenOrObservationBase
> configurator
) {
530 return defaultService
.findByTitle(configurator
);
539 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List)
542 public Integer
countByTitle(Class
<?
extends SpecimenOrObservationBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
) {
543 return defaultService
.countByTitle(clazz
, queryString
, matchmode
, criteria
);
549 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID)
552 public SpecimenOrObservationBase
load(UUID uuid
) {
553 return defaultService
.load(uuid
);
558 * @param propertyPaths
560 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID, java.util.List)
563 public SpecimenOrObservationBase
load(UUID uuid
, List
<String
> propertyPaths
) {
564 return defaultService
.load(uuid
, propertyPaths
);
568 * @param configurator
570 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
573 public Integer
countByTitle(IIdentifiableEntityServiceConfigurator
<SpecimenOrObservationBase
> configurator
) {
574 return defaultService
.countByTitle(configurator
);
579 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getFieldUnitUuidAndTitleCache()
582 public List
<UuidAndTitleCache
<FieldUnit
>> getFieldUnitUuidAndTitleCache() {
583 return defaultService
.getFieldUnitUuidAndTitleCache();
588 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDerivedUnitUuidAndTitleCache()
591 public List
<UuidAndTitleCache
<DerivedUnit
>> getDerivedUnitUuidAndTitleCache() {
592 return defaultService
.getDerivedUnitUuidAndTitleCache();
596 * @param transientObject
598 * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase)
601 public SpecimenOrObservationBase
merge(SpecimenOrObservationBase transientObject
) {
602 return defaultService
.merge(transientObject
);
607 * @param propertyPaths
609 * @throws DerivedUnitFacadeNotSupportedException
610 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDerivedUnitFacade(eu.etaxonomy.cdm.model.occurrence.DerivedUnit, java.util.List)
613 public DerivedUnitFacade
getDerivedUnitFacade(DerivedUnit derivedUnit
, List
<String
> propertyPaths
) throws DerivedUnitFacadeNotSupportedException
{
614 return defaultService
.getDerivedUnitFacade(derivedUnit
, propertyPaths
);
625 * @param propertyPaths
627 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
630 public List
<SpecimenOrObservationBase
> listByTitle(Class
<?
extends SpecimenOrObservationBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
631 return defaultService
.listByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
636 * @param propertyPaths
638 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#listDerivedUnitFacades(eu.etaxonomy.cdm.model.description.DescriptionBase, java.util.List)
641 public List
<DerivedUnitFacade
> listDerivedUnitFacades(DescriptionBase description
, List
<String
> propertyPaths
) {
642 return defaultService
.listDerivedUnitFacades(description
, propertyPaths
);
650 * @param propertyPaths
652 * @see eu.etaxonomy.cdm.api.service.IService#page(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
655 public Pager
<SpecimenOrObservationBase
> page(Class
<?
extends SpecimenOrObservationBase
> type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
656 return defaultService
.page(type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
661 * @param includeRelationships
662 * @param associatedTaxon
667 * @param propertyPaths
669 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#listByAssociatedTaxon(java.lang.Class, java.util.Set, eu.etaxonomy.cdm.model.taxon.Taxon, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
672 public <T
extends SpecimenOrObservationBase
> List
<T
> listByAssociatedTaxon(Class
<T
> type
, Set
<TaxonRelationshipEdge
> includeRelationships
, Taxon associatedTaxon
, Integer maxDepth
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
673 return defaultService
.listByAssociatedTaxon(type
, includeRelationships
, associatedTaxon
, maxDepth
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
677 * @param persistentObject
679 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase)
682 public UUID
refresh(SpecimenOrObservationBase persistentObject
) {
683 return defaultService
.refresh(persistentObject
);
694 * @param propertyPaths
696 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByReferenceTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
699 public List
<SpecimenOrObservationBase
> listByReferenceTitle(Class
<?
extends SpecimenOrObservationBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
700 return defaultService
.listByReferenceTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
708 * @see eu.etaxonomy.cdm.api.service.IService#rows(java.lang.String, int, int)
711 public List
<SpecimenOrObservationBase
> rows(String tableName
, int limit
, int start
) {
712 return defaultService
.rows(tableName
, limit
, start
);
716 * @param newInstances
718 * @see eu.etaxonomy.cdm.api.service.IService#save(java.util.Collection)
721 public Map
<UUID
, SpecimenOrObservationBase
> save(Collection
<SpecimenOrObservationBase
> newInstances
) {
722 for(SpecimenOrObservationBase unit
:newInstances
){
730 * @param includeRelationships
731 * @param associatedTaxon
736 * @param propertyPaths
738 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#pageByAssociatedTaxon(java.lang.Class, java.util.Set, eu.etaxonomy.cdm.model.taxon.Taxon, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
741 public <T
extends SpecimenOrObservationBase
> Pager
<T
> pageByAssociatedTaxon(Class
<T
> type
, Set
<TaxonRelationshipEdge
> includeRelationships
, Taxon associatedTaxon
, Integer maxDepth
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
742 return defaultService
.pageByAssociatedTaxon(type
, includeRelationships
, associatedTaxon
, maxDepth
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
748 * @see eu.etaxonomy.cdm.api.service.IService#save(eu.etaxonomy.cdm.model.common.ICdmBase)
751 public UUID
save(SpecimenOrObservationBase newInstance
) {
752 units
.add(newInstance
);
757 * @param transientObject
759 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(eu.etaxonomy.cdm.model.common.ICdmBase)
762 public UUID
saveOrUpdate(SpecimenOrObservationBase transientObject
) {
763 units
.add(transientObject
);
768 * @param transientObjects
770 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(java.util.Collection)
773 public Map
<UUID
, SpecimenOrObservationBase
> saveOrUpdate(Collection
<SpecimenOrObservationBase
> transientObjects
) {
774 for(SpecimenOrObservationBase unit
:transientObjects
){
785 * @param highlightFragments
789 * @param propertyPaths
791 * @throws CorruptIndexException
792 * @throws IOException
793 * @throws ParseException
794 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#findByFullText(java.lang.Class, java.lang.String, org.hibernate.search.spatial.impl.Rectangle, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
797 public Pager
<SearchResult
<SpecimenOrObservationBase
>> findByFullText(Class
<?
extends SpecimenOrObservationBase
> clazz
, String queryString
, Rectangle boundingBox
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
798 return defaultService
.findByFullText(clazz
, queryString
, boundingBox
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
802 * @param transientObject
804 * @see eu.etaxonomy.cdm.api.service.IService#update(eu.etaxonomy.cdm.model.common.ICdmBase)
807 public UUID
update(SpecimenOrObservationBase transientObject
) {
808 return defaultService
.update(transientObject
);
813 * @param includeProperties
817 * @param propertyPaths
819 * @see eu.etaxonomy.cdm.api.service.IService#list(eu.etaxonomy.cdm.model.common.ICdmBase, java.util.Set, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
822 public List
<SpecimenOrObservationBase
> list(SpecimenOrObservationBase example
, Set
<String
> includeProperties
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
823 return defaultService
.list(example
, includeProperties
, limit
, start
, orderHints
, propertyPaths
);
828 * @param matchStrategy
829 * @param mergeStrategy
831 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#deduplicate(java.lang.Class, eu.etaxonomy.cdm.strategy.match.IMatchStrategy, eu.etaxonomy.cdm.strategy.merge.IMergeStrategy)
834 public int deduplicate(Class
<?
extends SpecimenOrObservationBase
> clazz
, IMatchStrategy matchStrategy
, IMergeStrategy mergeStrategy
) {
835 return defaultService
.deduplicate(clazz
, matchStrategy
, mergeStrategy
);
846 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findTitleCache(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, eu.etaxonomy.cdm.persistence.query.MatchMode)
849 public Pager
<SpecimenOrObservationBase
> findTitleCache(Class
<?
extends SpecimenOrObservationBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, MatchMode matchMode
) {
850 return defaultService
.findTitleCache(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, matchMode
);
856 public List
<SpecimenOrObservationBase
> getUnits() {
861 * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getFieldUnits(java.util.UUID)
864 public Collection
<FieldUnit
> getFieldUnits(UUID derivedUnitUuid
) {
865 return defaultService
.getFieldUnits(derivedUnitUuid
);