eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/TissueSampleGeneralDetailElement.java

   1 /**
   2 * Copyright (C) 2013 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9 package eu.etaxonomy.taxeditor.ui.section.occurrence.dna;
  10
  11 import org.apache.logging.log4j.LogManager;
  12 import org.apache.logging.log4j.Logger;
  13
  14 import eu.etaxonomy.cdm.api.service.IVocabularyService;
  15 import eu.etaxonomy.cdm.facade.DerivedUnitFacade;
  16 import eu.etaxonomy.cdm.model.agent.AgentBase;
  17 import eu.etaxonomy.cdm.model.agent.Institution;
  18 import eu.etaxonomy.cdm.model.common.TimePeriod;
  19 import eu.etaxonomy.cdm.model.occurrence.Collection;
  20 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  21 import eu.etaxonomy.cdm.model.occurrence.PreservationMethod;
  22 import eu.etaxonomy.cdm.model.term.DefinedTerm;
  23 import eu.etaxonomy.cdm.model.term.TermType;
  24 import eu.etaxonomy.cdm.model.term.TermVocabulary;
  25 import eu.etaxonomy.cdm.model.term.VocabularyEnum;
  26 import eu.etaxonomy.taxeditor.store.CdmStore;
  27 import eu.etaxonomy.taxeditor.ui.combo.term.TermComboElement;
  28 import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
  29 import eu.etaxonomy.taxeditor.ui.element.CheckboxElement;
  30 import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
  31 import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
  32 import eu.etaxonomy.taxeditor.ui.element.TimePeriodElement;
  33 import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
  34 import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
  35
  36 /**
  37  * @author pplitzner
  38  * @date 16.12.2013
  39  */
  40 public class TissueSampleGeneralDetailElement extends AbstractCdmDetailElement<DerivedUnitFacade> {
  41
  42     @SuppressWarnings("unused")
  43     static private final Logger logger = LogManager.getLogger(TissueSampleGeneralDetailElement.class);
  44
  45     private final TermVocabulary<?> plantKindOfUnitVocabulary = CdmStore.getService(IVocabularyService.class).find(VocabularyEnum.PlantKindOfUnit.getUuid());
  46
  47     private TermComboElement<DefinedTerm> comboKindOfTissue;
  48     private EntitySelectionElement<Institution> selectionInstitution;
  49     private EntitySelectionElement<AgentBase> selectionStaff;
  50     private TimePeriodElement datePreparation;
  51     private TermComboElement<DefinedTerm> comboPreservationMedium;
  52     private EntitySelectionElement<Collection> selectionCollection;
  53     private TextWithLabelElement textAccessionNumber;
  54     private TextWithLabelElement textBarcode;
  55     private CheckboxElement checkIsPublish;
  56
  57     public TissueSampleGeneralDetailElement(CdmFormFactory formFactory, ICdmFormElement formElement) {
  58         super(formFactory, formElement);
  59     }
  60
  61     @Override
  62     protected void createControls(ICdmFormElement formElement, DerivedUnitFacade facade, int style) {
  63         DerivedUnit entity = getEntity().innerDerivedUnit();
  64
  65         comboKindOfTissue = formFactory.createDefinedTermComboElement(plantKindOfUnitVocabulary, formElement, "Kind Of Tissue", entity.getKindOfUnit(), style);
  66         TimePeriod preparationDate = null;
  67         DefinedTerm preservationMedium = null;
  68         AgentBase<?> staff = null;
  69         Institution institution = null;
  70         if(entity.getDerivedFrom()!=null){
  71             staff = entity.getDerivedFrom().getActor();
  72             preparationDate = entity.getDerivedFrom().getTimeperiod();
  73             institution = entity.getDerivedFrom().getInstitution();
  74         }
  75         if(entity.getPreservation()!=null){
  76             preservationMedium = entity.getPreservation().getMedium();
  77         }
  78         selectionInstitution = formFactory.createSelectionElement(Institution.class,
  79                 formElement, "Institution", institution, EntitySelectionElement.ALL, style);
  80         selectionStaff = formFactory.createSelectionElement(AgentBase.class,
  81                 formElement, "Staff", staff, EntitySelectionElement.ALL,style);
  82         datePreparation = formFactory.createTimePeriodElement(formElement, "Preparation date", preparationDate, style);
  83         comboPreservationMedium = formFactory.createDefinedTermComboElement(TermType.MaterialOrMethod, formElement, "Preservation medium", preservationMedium, style);
  84         selectionCollection = formFactory.createSelectionElement(Collection.class,
  85                 formElement, "Collection", entity.getCollection(), EntitySelectionElement.ALL, style);
  86         textAccessionNumber = formFactory.createTextWithLabelElement(formElement, "Accession Number", entity.getAccessionNumber(), style);
  87         textBarcode = formFactory.createTextWithLabelElement(formElement, "Barcode", entity.getBarcode(), style);
  88         checkIsPublish = formFactory.createCheckbox(formElement, "Publish", entity.isPublish(), style);
  89     }
  90
  91     @Override
  92     public void handleEvent(Object eventSource) {
  93         DerivedUnit entity = getEntity().innerDerivedUnit();
  94         if(eventSource==comboKindOfTissue) {
  95             entity.setKindOfUnit(comboKindOfTissue.getSelection());
  96         }
  97         else if(eventSource==comboPreservationMedium) {
  98             addPreservationMethod().setMedium(comboPreservationMedium.getSelection());
  99         }
 100         else if(eventSource==selectionCollection){
 101             getEntity().setCollection(selectionCollection.getSelection());
 102         }
 103         else if(eventSource==textAccessionNumber){
 104             getEntity().setAccessionNumber(textAccessionNumber.getText());
 105         }
 106         else if(eventSource==textBarcode){
 107             getEntity().setBarcode(textBarcode.getText());
 108         }
 109         else if(eventSource==datePreparation){
 110             if(entity.getDerivedFrom()!=null){
 111                 entity.getDerivedFrom().setTimeperiod(datePreparation.getTimePeriod());
 112             }
 113         }
 114         else if(eventSource==selectionInstitution){
 115             if(entity.getDerivedFrom()!=null){
 116                 entity.getDerivedFrom().setInstitution(selectionInstitution.getSelection());
 117             }
 118         }
 119         else if(eventSource==selectionStaff){
 120             if(entity.getDerivedFrom()!=null){
 121                 entity.getDerivedFrom().setActor(selectionStaff.getSelection());
 122             }
 123         }
 124         else if(eventSource==checkIsPublish){
 125             entity.setPublish(checkIsPublish.getSelection());
 126         }
 127     }
 128
 129     private PreservationMethod addPreservationMethod(){
 130         DerivedUnit entity = getEntity().innerDerivedUnit();
 131         PreservationMethod preservationMethod = null;
 132         preservationMethod = entity.getPreservation();
 133         if(entity.getPreservation()==null){
 134             preservationMethod = PreservationMethod.NewInstance();
 135             entity.setPreservation(preservationMethod);
 136         }
 137         return preservationMethod;
 138     }
 139
 140     @Override
 141     public void fillFields() {
 142
 143         //TODO: implement
 144 //      comboKindOfTissue;
 145 //        selectionInstitution;
 146 //        selectionStaff;
 147 //        datePreparation;
 148 //        comboPreservationMedium;
 149 //        selectionCollection;
 150 //        textAccessionNumber;
 151 //        textBarcode;
 152 //        checkIsPublish;
 153
 154     }
 155 }