3 * Copyright (C) 2014 EDIT
4 * European Distributed Institute of Taxonomy
5 * http://www.e-taxonomy.eu
7 * The contents of this file are subject to the Mozilla Public License Version 1.1
8 * See LICENSE.TXT at the top of this package for the full license terms.
10 package eu
.etaxonomy
.taxeditor
.editor
.view
.dataimport
;
12 import java
.io
.IOException
;
13 import java
.io
.InputStream
;
15 import java
.util
.ArrayList
;
16 import java
.util
.Collection
;
18 import org
.apache
.http
.client
.ClientProtocolException
;
20 import eu
.etaxonomy
.cdm
.ext
.occurrence
.bioCase
.BioCaseQueryServiceWrapper
;
21 import eu
.etaxonomy
.cdm
.io
.common
.CdmDefaultImport
;
22 import eu
.etaxonomy
.cdm
.io
.specimen
.abcd206
.in
.Abcd206ImportConfigurator
;
23 import eu
.etaxonomy
.cdm
.model
.occurrence
.SpecimenOrObservationBase
;
24 import eu
.etaxonomy
.taxeditor
.editor
.view
.dataimport
.transientServices
.TransientCdmRepository
;
25 import eu
.etaxonomy
.taxeditor
.store
.CdmStore
;
32 public class SpecimenImportView
extends DataImportView
<SpecimenOrObservationBase
<?
>> {
34 public static final String ID
= "eu.etaxonomy.taxeditor.editor.view.dataimport.SpecimenImportView"; //$NON-NLS-1$
38 public SpecimenImportView() {
44 public void setEndpoint(URI endPoint
) {
45 this.endPoint
= endPoint
;
49 * @see eu.etaxonomy.taxeditor.editor.view.dataimport.DataImportView#getTextForTableItem(java.lang.Object)
52 protected String
getTextForTableItem(SpecimenOrObservationBase
<?
> item
) {
53 return item
.getTitleCache();
57 * @see eu.etaxonomy.taxeditor.editor.view.dataimport.DataImportView#query()
61 String errorMessage
= "Could not execute query " + query
;
63 Collection
<SpecimenOrObservationBase
<?
>> results
= new ArrayList
<SpecimenOrObservationBase
<?
>>();
65 //FIXME move ABCD import to cdmlib -> this will also get rid of the transient services
66 InputStream resultStream
;
67 resultStream
= new BioCaseQueryServiceWrapper().query(query
, endPoint
);
68 Abcd206ImportConfigurator configurator
= Abcd206ImportConfigurator
.NewInstance(resultStream
, null, false);
69 TransientCdmRepository repo
=
70 new TransientCdmRepository(CdmStore
.getCurrentApplicationConfiguration());
71 configurator
.setCdmAppController(repo
);
72 configurator
.setAddMediaAsMediaSpecimen(true);
74 CdmDefaultImport
<Abcd206ImportConfigurator
> importer
= new CdmDefaultImport
<Abcd206ImportConfigurator
>();
75 importer
.invoke(configurator
);
76 results
= repo
.getUnits();
78 } catch (ClientProtocolException e
) {
79 logger
.error(errorMessage
, e
);
80 } catch (IOException e
) {
81 logger
.error(errorMessage
, e
);