eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/derivateSearch/DerivateLabelProvider.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2013 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.taxeditor.view.derivateSearch;
  11
  12 import java.util.List;
  13 import java.util.Set;
  14 import java.util.UUID;
  15
  16 import org.eclipse.jface.viewers.ColumnLabelProvider;
  17 import org.eclipse.jface.viewers.TreeNode;
  18 import org.eclipse.swt.graphics.Image;
  19
  20 import eu.etaxonomy.cdm.model.common.DefinedTerm;
  21 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  22 import eu.etaxonomy.cdm.model.molecular.Sequence;
  23 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  24 import eu.etaxonomy.cdm.model.occurrence.Collection;
  25 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  26 import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
  27 import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
  28 import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
  29 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  30 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
  31 import eu.etaxonomy.taxeditor.model.ImageResources;
  32 import eu.etaxonomy.taxeditor.store.CdmStore;
  33
  34 /**
  35  * Label provider for the views to show {@link SpecimenOrObservationBase}s.
  36  */
  37 public class DerivateLabelProvider extends ColumnLabelProvider {
  38
  39     private Set<SingleRead> multiLinkSingleReads;
  40
  41     private static DefinedTerm photoTerm = null;
  42     private static DefinedTerm drawingTerm = null;
  43     private static DefinedTerm specimenScanTerm = null;
  44
  45     private static void initializeTerms() {
  46         List<DefinedTerm> preferredTerms = CdmStore.getTermManager().getPreferredTerms(DefinedTerm.class);
  47         for (DefinedTerm definedTerm : preferredTerms) {
  48             if(definedTerm.getUuid().equals(UUID.fromString("04673952-dab1-42ff-b47a-5e847c350eaf"))){//photo
  49                 photoTerm = definedTerm;
  50             }
  51             else if(definedTerm.getUuid().equals(UUID.fromString("76204a15-098f-4afe-9e8f-fa344ee3fdbb"))){//drawing
  52                 drawingTerm = definedTerm;
  53             }
  54             else if(definedTerm.getUuid().equals(UUID.fromString("c0b127d6-c849-48f9-bbc3-29e3337c1d03"))){//cover TODO temporary until new term is created
  55                 specimenScanTerm = definedTerm;
  56             }
  57         }
  58     }
  59
  60     public static DefinedTerm getLivingPlantPhotoTerm(){
  61         if(photoTerm==null){
  62             initializeTerms();
  63         }
  64         return photoTerm;
  65     }
  66
  67     public static DefinedTerm getArtworkTerm(){
  68         if(drawingTerm==null){
  69             initializeTerms();
  70         }
  71         return drawingTerm;
  72     }
  73
  74     public static DefinedTerm getSpecimenScanTerm(){
  75         if(specimenScanTerm==null){
  76             initializeTerms();
  77         }
  78         return specimenScanTerm;
  79     }
  80
  81
  82     /** {@inheritDoc} */
  83     @Override
  84     public String getText(Object element) {
  85         return getDerivateText(element);
  86     }
  87
  88     /** {@inheritDoc} */
  89     @Override
  90     public String getToolTipText(Object element) {
  91         return getDerivateText(element);
  92     }
  93
  94     /**
  95      *
  96      * @param element
  97      * @return
  98      */
  99     public static String getDerivateText(Object element){
 100         TreeNode parentNode = null;
 101         if(element instanceof TreeNode){
 102             parentNode = ((TreeNode) element).getParent();
 103             //unwrap specimen from TreeNode
 104             element = ((TreeNode) element).getValue();
 105         }
 106
 107         String label = "";
 108         if(element instanceof FieldUnit){
 109             FieldUnit fieldUnit = (FieldUnit)element;
 110             GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
 111             if(gatheringEvent!=null){
 112                 label += gatheringEvent.getCountry()!=null?gatheringEvent.getCountry().getLabel()+", ":"";
 113                 label += gatheringEvent.getLocality()!=null?gatheringEvent.getLocality().getText()+", ":"";
 114 //                label += gatheringEvent.getGatheringDate()!=null?gatheringEvent.getGatheringDate()+", ":"";
 115                 label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+", ":"";
 116             }
 117             label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber():"";
 118         }
 119         else if(element instanceof DerivedUnit){
 120             DerivedUnit derivedUnit = (DerivedUnit)element;
 121             if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
 122                 if(parentNode!=null && parentNode.getValue() instanceof FieldUnit){
 123                     FieldUnit fieldUnit = (FieldUnit) parentNode.getValue();
 124                     GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
 125                     if(gatheringEvent!=null){
 126                         label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+", ":"";
 127                     }
 128                     label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+", ":"";
 129                 }
 130                 Collection collection = derivedUnit.getCollection();
 131                 if(collection!=null){
 132                     label += collection.getName()!=null?collection.getName()+" ":"";
 133                     label += collection.getCode()!=null?"("+collection.getCode()+"), ":"";
 134                 }
 135                 label += derivedUnit.getAccessionNumber()!=null?derivedUnit.getAccessionNumber()+", ":"";
 136                 label += derivedUnit.getBarcode()!=null?derivedUnit.getBarcode():"";
 137             }
 138             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 139
 140             }
 141         }
 142         else if(element instanceof MediaSpecimen){
 143             MediaSpecimen mediaSpecimen = (MediaSpecimen)element;
 144             //TODO implement
 145             label += element.toString();
 146         }
 147         else if(element instanceof DnaSample
 148                 || (element instanceof DerivedUnit
 149                         && ((SpecimenOrObservationBase<?>) element).getRecordBasis()==SpecimenOrObservationType.DnaSample)){
 150             //TODO implement
 151             label += element.toString();
 152
 153         }
 154         else if(element instanceof Sequence){
 155             Sequence sequence = (Sequence)element;
 156             label += "SampleDesignation?"+", ";
 157             label += sequence.getDnaMarker()!=null?sequence.getDnaMarker():"";
 158         }
 159         else if(element instanceof SingleRead){
 160             SingleRead singleRead = (SingleRead)element;
 161             label += singleRead.getPrimer()!=null?singleRead.getPrimer().getLabel()+", ":"";
 162             label += "Marker?";
 163         }
 164         else if(element instanceof SpecimenOrObservationBase){
 165             SpecimenOrObservationBase<?> derivate = (SpecimenOrObservationBase<?>) element;
 166             SpecimenOrObservationType type = derivate.getRecordBasis();
 167             return derivate.getTitleCache() + (type!=null?" ["+type.toString()+"]":"");
 168         }
 169         if(label.isEmpty()){
 170             label = element.toString();
 171         }
 172         else if(label.endsWith(", ")){
 173             label = label.substring(0, label.length()-2);
 174         }
 175         return label;
 176     }
 177
 178     /* (non-Javadoc)
 179      * @see org.eclipse.jface.viewers.ColumnLabelProvider#getImage(java.lang.Object)
 180      */
 181     @Override
 182     public Image getImage(Object element) {
 183         if(element instanceof TreeNode){
 184             element = ((TreeNode) element).getValue();
 185         }
 186         if(element instanceof FieldUnit){
 187             return ImageResources.getImage(ImageResources.FIELD_UNIT);
 188         }
 189         else if(element instanceof DerivedUnit){
 190             DerivedUnit derivedUnit = (DerivedUnit)element;
 191             if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.FieldUnit){
 192                 return ImageResources.getImage(ImageResources.FIELD_UNIT);
 193             }
 194             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.DnaSample){
 195                 return ImageResources.getImage(ImageResources.DNA_SAMPLE_DERIVATE);
 196             }
 197             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 198                 return ImageResources.getImage(ImageResources.TISSUE_SAMPLE_DERIVATE);
 199             }
 200             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
 201                 return ImageResources.getImage(ImageResources.SPECIMEN_DERIVATE);
 202             }
 203             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.StillImage){
 204                 if(derivedUnit.getKindOfUnit()!=null){
 205                     if(derivedUnit.getKindOfUnit().equals(getArtworkTerm())){
 206                         return ImageResources.getImage(ImageResources.ARTWORK_DERIVATE);
 207                     }
 208                     else if(derivedUnit.getKindOfUnit().equals(getLivingPlantPhotoTerm())){
 209                         return ImageResources.getImage(ImageResources.LIVING_PLANT_PHOTO_DERIVATE);
 210                     }
 211                     else if(derivedUnit.getKindOfUnit().equals(getSpecimenScanTerm())){
 212                         return ImageResources.getImage(ImageResources.SPECIMEN_SCAN_DERIVATE);
 213                     }
 214                 }
 215             }
 216         }
 217         else if(element instanceof Sequence){
 218             return ImageResources.getImage(ImageResources.SEQUENCE_DERIVATE);
 219         }
 220
 221         else if(element instanceof SingleRead){
 222             if(multiLinkSingleReads.contains(element)){
 223                 return ImageResources.getImage(ImageResources.SINGLE_READ_DERIVATE_MULTILINK);
 224             }
 225             else{
 226                 return ImageResources.getImage(ImageResources.SINGLE_READ_DERIVATE);
 227             }
 228         }
 229         return super.getImage(element);
 230     }
 231
 232     /**
 233      * @param multiLinkSingleReads2
 234      */
 235     public void setMultiLinkSingleReads(Set<SingleRead> multiLinkSingleReads) {
 236         this.multiLinkSingleReads = multiLinkSingleReads;
 237     }
 238
 239 }