eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SingleReadGeneralDetailElement.java

   1 /**
   2  * Copyright (C) 2014 EDIT
   3  * European Distributed Institute of Taxonomy
   4  * http://www.e-taxonomy.eu
   5  *
   6  * The contents of this file are subject to the Mozilla Public License Version 1.1
   7  * See LICENSE.TXT at the top of this package for the full license terms.
   8  */
   9 package eu.etaxonomy.taxeditor.ui.section.occurrence.dna;
  10
  11 import eu.etaxonomy.cdm.model.molecular.Amplification;
  12 import eu.etaxonomy.cdm.model.molecular.AmplificationResult;
  13 import eu.etaxonomy.cdm.model.molecular.Primer;
  14 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  15 import eu.etaxonomy.taxeditor.store.StoreUtil;
  16 import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
  17 import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
  18 import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;
  19 import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
  20 import eu.etaxonomy.taxeditor.ui.section.supplemental.AnnotationSection;
  21 import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
  22
  23 /**
  24  * @author pplitzner
  25  * @date 06.01.2014
  26  *
  27  */
  28 public class SingleReadGeneralDetailElement extends AbstractCdmDetailElement<SingleRead> {
  29
  30     private EntitySelectionElement<Primer> selectionPrimer;
  31     private EntitySelectionElement<Amplification> selectionAmplification;
  32
  33     /**
  34      * @param formFactory
  35      * @param formElement
  36      */
  37     public SingleReadGeneralDetailElement(CdmFormFactory formFactory, ICdmFormElement formElement) {
  38         super(formFactory, formElement);
  39     }
  40
  41     /*
  42      * (non-Javadoc)
  43      *
  44      * @see
  45      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
  46      * (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
  47      */
  48     @Override
  49     protected void createControls(ICdmFormElement formElement, SingleRead entity, int style) {
  50         selectionPrimer = formFactory.createSelectionElement(Primer.class, //getConversationHolder(),
  51                 formElement, "Primer", entity.getPrimer(), EntitySelectionElement.ALL, style);
  52         AmplificationResult amplificationResult = entity.getAmplificationResult();
  53         if(amplificationResult==null){
  54             amplificationResult = AmplificationResult.NewInstance();
  55             amplificationResult.addSingleRead(entity);
  56         }
  57         selectionAmplification = formFactory.createSelectionElement(Amplification.class, //getConversationHolder(),
  58                 formElement, "Amplification", amplificationResult.getAmplification(), EntitySelectionElement.ALL, style);
  59
  60         AnnotationSection annotationSection = formFactory.createAnnotationSection(getConversationHolder(), formElement, StoreUtil.getSectionStyle(AnnotationSection.class, entity.getClass().getCanonicalName()));
  61         annotationSection.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
  62         annotationSection.setEntity(entity);
  63
  64         AmplificationCloningDetailSection cloningSection = formFactory.createAmplificationCloningDetailSection(getConversationHolder(), formElement, formFactory.getSelectionProvider(), StoreUtil.getSectionStyle(AmplificationCloningDetailSection.class, amplificationResult.getClass().getCanonicalName()));
  65         cloningSection.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
  66         cloningSection.setEntity(amplificationResult);
  67
  68         AmplificationGelPhotoCollectionDetailSection gelPhotoSection = formFactory.createAmplificationGelPhotoCollectionDetailSection(getConversationHolder(), formElement, StoreUtil.getSectionStyle(AmplificationGelPhotoCollectionDetailSection.class, amplificationResult.getClass().getCanonicalName()));
  69         gelPhotoSection.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
  70         gelPhotoSection.setEntity(amplificationResult);
  71     }
  72
  73     /*
  74      * (non-Javadoc)
  75      *
  76      * @see
  77      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
  78      * .lang.Object)
  79      */
  80     @Override
  81     public void handleEvent(Object eventSource) {
  82         if(eventSource==selectionPrimer){
  83             getEntity().setPrimer(selectionPrimer.getSelection());
  84         }
  85         else {
  86             if(eventSource==selectionAmplification){
  87                 AmplificationResult amplificationResult = getEntity().getAmplificationResult();
  88                 if(amplificationResult==null){
  89                     amplificationResult = AmplificationResult.NewInstance();
  90                 }
  91                 amplificationResult.setAmplification(selectionAmplification.getSelection());
  92                 amplificationResult.addSingleRead(getEntity());
  93             }
  94         }
  95     }
  96 }