import org.eclipse.jface.viewers.ISelection;
import org.eclipse.jface.viewers.SelectionChangedEvent;
+import org.eclipse.jface.viewers.TreeNode;
import org.eclipse.swt.SWT;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.ui.forms.widgets.ExpandableComposite;
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;
import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.ext.occurrence.gbif.GbifResponse;
import eu.etaxonomy.cdm.model.agent.Person;
import eu.etaxonomy.cdm.model.agent.Team;
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
import eu.etaxonomy.cdm.model.description.CategoricalData;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
-import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
import eu.etaxonomy.cdm.model.description.SpecimenDescription;
import eu.etaxonomy.cdm.model.media.Media;
import eu.etaxonomy.cdm.model.molecular.Amplification;
+import eu.etaxonomy.cdm.model.molecular.DnaSample;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.cdm.model.molecular.SingleRead;
import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
-import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
+import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
import eu.etaxonomy.taxeditor.editor.UsageTermCollection;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
+import eu.etaxonomy.taxeditor.model.IDerivedUnitFacadePart;
import eu.etaxonomy.taxeditor.model.PolytomousKeyRelationship;
+import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.element.AbstractFormSection;
import eu.etaxonomy.taxeditor.ui.section.name.NonViralNameDetailSection;
import eu.etaxonomy.taxeditor.ui.section.name.ProtologueSection;
import eu.etaxonomy.taxeditor.ui.section.name.TypeDesignationSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.AmplificationGeneralDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.ArtworkGeneralDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitBaseDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitGeneralDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.DeterminationDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.DnaSampleGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.EmptySection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitGeneralDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.LivingPlantPhotoGeneralDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.PreservedSpecimenDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.PreservedSpecimenDeterminationDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.PreservedSpecimenGeneralDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.SequenceGeneralDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.SingleReadGeneralDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.SpecimenScanGeneralDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.occurrence.TissueSampleGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.OriginalLabelDataSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.association.TaxonAssociationDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.AmplificationCloningDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.AmplificationGelPhotoCollectionDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.AmplificationGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.AmplificationPrimerDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaQualityDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSampleGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SampleDesignationDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceContigFileCollectionDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceReferenceCollectionDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadPherogramCollectionDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.TissueSampleGeneralDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.media.MediaSpecimenGeneralDetailSection;
import eu.etaxonomy.taxeditor.ui.section.reference.NomenclaturalReferenceDetailSection;
import eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.supplemental.RightsSection;
import eu.etaxonomy.taxeditor.ui.section.taxon.ParsingMessagesSection;
import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonBaseDetailSection;
import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonRelationshipDetailSection;
*/
@Override
public void setInput(Object input) {
- if (input instanceof DerivedUnit) {
+ if(input instanceof TreeNode){
+ input = ((TreeNode) input).getValue();
+ }
+ if(input instanceof GbifResponse){
+ input = ((GbifResponse) input).getDerivedUnitFacade();
+ }
+ if (input.getClass().equals(DerivedUnit.class)) {
DerivedUnit derivedUnit = (DerivedUnit)input;
- if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen
- ||derivedUnit.getRecordBasis()==SpecimenOrObservationType.DnaSample){
- // Do nothing! This is the case if the new DetailsViews are used that are based on
- // the DerivedUnits themselves instead of the DerivedUnitFacade
- }
- else {
- try {
- input = DerivedUnitFacade.NewInstance(derivedUnit,
- PreferencesUtil.getDerivedUnitConfigurator());
- } catch (DerivedUnitFacadeNotSupportedException e) {
- AbstractUtility.error(getClass(), e);
- }
+ try {
+ input = DerivedUnitFacade.NewInstance(derivedUnit,
+ PreferencesUtil.getDerivedUnitConfigurator());
+ } catch (DerivedUnitFacadeNotSupportedException e) {
+// MessagingUtils.error(getClass(), e); //nothing should happen, later on the Details View will show an according information that it is not possible to open this data
}
}
else if(input instanceof FieldUnit){
getViewPart().changed(facade.innerFieldUnit());
}
}
-
- super.markViewPartDirty();
+ else{
+ super.markViewPartDirty();
+ }
}
// END HACK TO MAKE THE DERIVED UNIT FACADE WORK
// Need to build in a mechanism where navigators / editors are 'aware'
// of the corresponding detail viewer.
Object input = getInput();
+
+ destroySections();
if (input instanceof TaxonBase) {
createTaxonSections(rootElement);
createDerivedUnitBaseElementSection(rootElement);
}
else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.TissueSample){
- createTissueSampleSection(rootElement);
- }
- // else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.DnaSample){
- // createDnaSampleSection(rootElement);
- // }
- //FIXME: change to specific SpecimenOrObservationType
- else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.StillImage){
- createSpecimenScanSection(rootElement);
- }
- else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.StillImage){
- createLivingPlantPhotoSection(rootElement);
- }
- else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.StillImage){
- createArtworkSection(rootElement);
+ //TissueSample should only be created by using it's own class
+ //in future using only one class with different SpecimenOrObservationTypes is desired
+// createTissueSampleSection(rootElement);
}
else{
createDerivedUnitBaseElementSection(rootElement);
}
- } else if (input instanceof SpecimenOrObservationBase){
- SpecimenOrObservationType recordBasis = ((SpecimenOrObservationBase<?>) input).getRecordBasis();
- if(recordBasis==SpecimenOrObservationType.PreservedSpecimen){
- createPreservedSpecimenSpecimenSection(rootElement);
- }
- else if(recordBasis==SpecimenOrObservationType.FieldUnit){
- createFieldUnitSection(rootElement);
+ } else if (input instanceof DnaSample){
+ DnaSample dnaSample = (DnaSample)input;
+ if(dnaSample.getRecordBasis()==SpecimenOrObservationType.TissueSample){
+ createTissueSampleSection(rootElement);
}
- else if(recordBasis==SpecimenOrObservationType.DnaSample){
+ else if(dnaSample.getRecordBasis()==SpecimenOrObservationType.DnaSample){
createDnaSampleSection(rootElement);
}
+ } else if (input instanceof MediaSpecimen){
+ createMediaSpecimenSection(rootElement);
}
else if(input instanceof Amplification){
createAmplificationSection(rootElement);
else if (input instanceof FeatureNodeContainer) {
createFeatureDistributionSection(rootElement);
- } else if (input instanceof PolytomousKey) {
- //createPolytomousKeySection(rootElement);
-
- } else if ((input instanceof PolytomousKeyNode) || (input instanceof PolytomousKeyRelationship)) {
+ }else if ((input instanceof PolytomousKeyNode) || (input instanceof PolytomousKeyRelationship)) {
createPolytomousKeyNodeSection(rootElement);
} else if (input instanceof User) {
createUserSection(rootElement);
createTermVocabularySection(rootElement);
} else if (input instanceof DefinedTermBase) {
createDefinedTermSection(rootElement);
- } else {
- destroySections();
+ }
+ else {
+ createEmptySection(rootElement);
}
layout();
}
+ /**
+ * @param rootElement
+ */
+ private void createEmptySection(RootElement parent) {
+ destroySections();
+
+ EmptySection emptySection = formFactory.createEmptySection(formFactory, parent, SWT.NONE);
+
+ addPart(emptySection);
+ }
+
/**
* @param rootElement
*/
@Override
public void setSelection(ISelection selection, boolean reveal) {
this.selection = selection;
- SelectionChangedEvent selectionChangedEvent = new SelectionChangedEvent(this, selection);
- fireSelectionChanged(selectionChangedEvent);
+ if(this.selection!=null){
+ SelectionChangedEvent selectionChangedEvent = new SelectionChangedEvent(this, selection);
+ fireSelectionChanged(selectionChangedEvent);
+ }
}
/**
private void createTaxonSections(RootElement parent) {
destroySections();
- TaxonBaseDetailSection taxonBaseDetailSection = formFactory.createTaxonBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ ParsingMessagesSection parsingMessagesSection = formFactory.createParsingMessagesSection(getConversationHolder(), parent, this,
+ ExpandableComposite.EXPANDED | ExpandableComposite.EXPANDED);
+ TaxonBaseDetailSection taxonBaseDetailSection = formFactory.createTaxonBaseDetailSection(getConversationHolder(), parent, this,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE
- | ExpandableComposite.EXPANDED);
-
+ NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
-
+ NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,ExpandableComposite.TWISTIE);
-
+ NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ //TODO RL
+ if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.IS_RL)){
+ ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ addPart(protologSection);
+ addPart(typeDesignationSection);
+ addPart(nameRelationshipSection);
+ }
- ParsingMessagesSection parsingMessagesSection = formFactory.createParsingMessagesSection(getConversationHolder(), parent, this, ExpandableComposite.EXPANDED);
+ addPart(parsingMessagesSection);
addPart(taxonBaseDetailSection);
addPart(nonViralNameSection);
addPart(nomenclaturalStatusSection);
- addPart(protologSection);
addPart(referenceDetailSection);
- addPart(typeDesignationSection);
- addPart(nameRelationshipSection);
- addPart(parsingMessagesSection);
}
/**
*/
private void createNameSections(RootElement parent) {
destroySections();
- NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
-
+ NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
-
+ NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
-
+ NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
addPart(nonViralNameSection);
addPart(nomenclaturalStatusSection);
- addPart(protologSection);
addPart(referenceDetailSection);
- addPart(typeDesignationSection);
- addPart(nameRelationshipSection);
+//TODO RL
+ if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.IS_RL)){
+ ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+
+ TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+
+ NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ addPart(protologSection);
+ addPart(typeDesignationSection);
+ addPart(nameRelationshipSection);
+ }
}
/**
private void createReferenceSections(RootElement parent) {
destroySections();
- ReferenceDetailSection referenceDetailSection = formFactory.createReferenceDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ ReferenceDetailSection referenceDetailSection = formFactory.createReferenceDetailSection(getConversationHolder(), parent, this,
+ ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(referenceDetailSection);
}
private void createMediaElementSection(RootElement parent) {
destroySections();
+
MediaDetailsSection mediaDetailSection = formFactory.createMediaDetailsSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(mediaDetailSection);
destroySections();
DerivedUnitGeneralDetailSection derivedUnitGeneralDetailSection = formFactory.createDerivedUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ //TODO for DerivateEditor do not use facade anymore to avoid this special case handling #4539
+ if(!(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart)){
+ derivedUnitGeneralDetailSection.setShowOnlyDerivedUnitData(true);
+ }
+ addPart(derivedUnitGeneralDetailSection);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ DerivedUnitBaseDetailSection derivedUnitBaseDetailSection = formFactory.createDerivedUnitBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ addPart(derivedUnitBaseDetailSection);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- DerivedUnitBaseDetailSection derivedUnitBaseDetailSection = formFactory.createDerivedUnitBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ OriginalLabelDataSection originalLabelDataSection = formFactory.createOriginalLabelDataSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ addPart(originalLabelDataSection);
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ //for editors working with facades
+ if(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart){
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ addPart(gatheringEventDetailSection);
- DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ addPart(fieldUnitDetailSection);
+ }
- addPart(derivedUnitGeneralDetailSection);
- addPart(gatheringEventDetailSection);
- addPart(fieldUnitDetailSection);
- addPart(derivedUnitBaseDetailSection);
- addPart(determinationDetailSection);
+ if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS)){
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ addPart(determinationDetailSection);
+ }
+ if(PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_TAXON_ASSOCIATIONS)){
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ TaxonAssociationDetailSection taxonAssociationDetailSection = formFactory.createTaxonAssociationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ addPart(taxonAssociationDetailSection);
+ }
}
addPart(fielUnitGeneralDetailSection);
addPart(gatheringEventDetailSection);
addPart(fieldUnitDetailSection);
- }
- private void createPreservedSpecimenSpecimenSection(RootElement parent) {
- destroySections();
-
- PreservedSpecimenGeneralDetailSection section = formFactory.createPreservedSpecimenGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- PreservedSpecimenDetailSection derivedUnitBaseDetailSection = formFactory.createPreservedSpecimenDetailsSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
-
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- PreservedSpecimenDeterminationDetailSection determinationDetailSection = formFactory.createPreservedSpecimenDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
-
- addPart(section);
- addPart(derivedUnitBaseDetailSection);
- addPart(determinationDetailSection);
+ if(PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS)){
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
+ addPart(determinationDetailSection);
+ }
}
private void createTissueSampleSection(RootElement parent) {
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
addPart(section);
+ addPart(sampleDesignationDetailSection);
}
private void createDnaSampleSection(RootElement parent) {
destroySections();
+
DnaSampleGeneralDetailSection section = formFactory.createDnaSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ DnaQualityDetailSection qualitySection = formFactory.createDnaQualityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+
+ SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
addPart(section);
+ addPart(qualitySection);
+ addPart(sampleDesignationDetailSection);
}
private void createAmplificationSection(RootElement parent) {
destroySections();
- AmplificationGeneralDetailSection section = formFactory.createAmplificationGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ AmplificationGeneralDetailSection generalSection = formFactory.createAmplificationGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- addPart(section);
- }
+ AmplificationPrimerDetailSection primerSection = formFactory.createAmplificationPrimerDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
- private void createSequenceSection(RootElement parent) {
- destroySections();
- SequenceGeneralDetailSection section = formFactory.createSequenceGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+
+ AmplificationCloningDetailSection cloningSection = formFactory.createAmplificationCloningDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- addPart(section);
+ AmplificationGelPhotoCollectionDetailSection gelPhotoSection = formFactory.createAmplificationGelPhotoCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
+
+ addPart(generalSection);
+ addPart(primerSection);
+ addPart(cloningSection);
+ addPart(gelPhotoSection);
}
- private void createSingleReadSection(RootElement parent) {
+ private void createSequenceSection(RootElement parent) {
destroySections();
- SingleReadGeneralDetailSection section = formFactory.createSingleReadGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ SequenceGeneralDetailSection section = formFactory.createSequenceGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
- addPart(section);
- }
+ formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- private void createSpecimenScanSection(RootElement parent) {
- destroySections();
- SpecimenScanGeneralDetailSection section = formFactory.createSpecimenScanGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ SequenceReferenceCollectionDetailSection referenceSection = formFactory.createSequenceReferenceCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ SequenceContigFileCollectionDetailSection contigFileSection = formFactory.createSequenceContigFileCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
+
addPart(section);
+ addPart(referenceSection);
+ addPart(contigFileSection);
}
- private void createLivingPlantPhotoSection(RootElement parent) {
+ private void createSingleReadSection(RootElement parent) {
destroySections();
- LivingPlantPhotoGeneralDetailSection section = formFactory.createLivingPlantPhotoGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
+ SingleReadGeneralDetailSection section = formFactory.createSingleReadGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
+ SingleReadPherogramCollectionDetailSection pherogramSection = formFactory.createSingleReadPherogramCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
addPart(section);
+ addPart(pherogramSection);
}
- private void createArtworkSection(RootElement parent) {
+ private void createMediaSpecimenSection(RootElement parent) {
destroySections();
- ArtworkGeneralDetailSection section = formFactory.createArtworkGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+
+ MediaSpecimenGeneralDetailSection generalSection = formFactory.createMediaSpecimenGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
+ addPart(generalSection);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
- addPart(section);
+ RightsSection rightsSection = formFactory.createRightsSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
+ addPart(rightsSection);
+
}