* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-
package eu.etaxonomy.taxeditor.model;
import java.io.BufferedWriter;
import java.io.FileOutputStream;
import java.io.OutputStreamWriter;
import java.io.Writer;
-import java.lang.reflect.InvocationTargetException;
import java.text.SimpleDateFormat;
import java.util.ArrayList;
import java.util.Calendar;
import java.util.Collection;
+import java.util.HashSet;
import java.util.LinkedHashMap;
import java.util.List;
import java.util.Map;
import java.util.zip.ZipEntry;
import java.util.zip.ZipOutputStream;
-import org.apache.commons.lang.StringUtils;
-import org.apache.log4j.Logger;
+import org.apache.commons.lang3.StringUtils;
+import org.apache.logging.log4j.LogManager;
+import org.apache.logging.log4j.Logger;
import org.eclipse.core.commands.ExecutionException;
-import org.eclipse.core.commands.NotEnabledException;
-import org.eclipse.core.commands.NotHandledException;
-import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.core.commands.operations.AbstractOperation;
import org.eclipse.core.commands.operations.IOperationHistory;
import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.ICoreRunnable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.NullProgressMonitor;
import org.eclipse.core.runtime.OperationCanceledException;
import org.eclipse.core.runtime.Status;
+import org.eclipse.core.runtime.SubMonitor;
import org.eclipse.core.runtime.SubProgressMonitor;
-import org.eclipse.core.runtime.jobs.ISchedulingRule;
import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.e4.ui.di.UISynchronize;
+import org.eclipse.e4.ui.model.application.ui.basic.MPart;
+import org.eclipse.e4.ui.workbench.modeling.EPartService;
import org.eclipse.jface.action.IStatusLineManager;
-import org.eclipse.jface.operation.IRunnableWithProgress;
-import org.eclipse.jface.resource.ColorRegistry;
-import org.eclipse.jface.resource.FontRegistry;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.SelectionChangedEvent;
import org.eclipse.swt.graphics.Color;
import org.eclipse.swt.graphics.Font;
import org.eclipse.swt.widgets.Display;
import org.eclipse.swt.widgets.Shell;
-import org.eclipse.ui.IEditorPart;
-import org.eclipse.ui.IViewPart;
-import org.eclipse.ui.IViewReference;
import org.eclipse.ui.IWorkbench;
-import org.eclipse.ui.IWorkbenchPage;
-import org.eclipse.ui.IWorkbenchPart;
-import org.eclipse.ui.IWorkbenchWindow;
-import org.eclipse.ui.PartInitException;
import org.eclipse.ui.PlatformUI;
-import org.eclipse.ui.handlers.IHandlerService;
import org.eclipse.ui.ide.undo.WorkspaceUndoUtil;
-import org.eclipse.ui.part.EditorPart;
import org.eclipse.ui.progress.IProgressConstants;
-import org.eclipse.ui.progress.IProgressService;
-import org.eclipse.ui.progress.IWorkbenchSiteProgressService;
-import org.eclipse.ui.themes.ITheme;
-import org.eclipse.ui.themes.IThemeManager;
import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.service.IProgressMonitorService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.cdm.common.CdmUtils;
+import eu.etaxonomy.cdm.common.SetMap;
import eu.etaxonomy.cdm.common.monitor.IRemotingProgressMonitor;
+import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.io.common.ExportDataWrapper;
import eu.etaxonomy.cdm.io.common.ExportResult;
import eu.etaxonomy.cdm.io.common.ExportResultType;
-import eu.etaxonomy.cdm.model.common.IEnumTerm;
+import eu.etaxonomy.cdm.io.common.ExportType;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.cdm.model.term.IEnumTerm;
+import eu.etaxonomy.taxeditor.event.EventUtility;
+import eu.etaxonomy.taxeditor.event.WorkbenchEventConstants;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IFeedbackGenerator;
import eu.etaxonomy.taxeditor.operation.IPostMoniteredOperationEnabled;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
-import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.operation.e4.CdmHandlerE4;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
import eu.etaxonomy.taxeditor.ui.dialog.ReportTextDialog;
-import eu.etaxonomy.taxeditor.view.AbstractCdmDataViewer;
-import eu.etaxonomy.taxeditor.view.detail.DetailsViewPart;
-import eu.etaxonomy.taxeditor.view.supplementaldata.SupplementalDataViewPart;
-import eu.etaxonomy.taxeditor.workbench.WorkbenchUtility;
+import eu.etaxonomy.taxeditor.view.e4.AbstractCdmDataViewer;
+import eu.etaxonomy.taxeditor.view.e4.details.DetailsPartE4;
+import eu.etaxonomy.taxeditor.workbench.part.IE4SavablePart;
/**
- *
* @author n.hoffmann
* @created 11.05.2009
- * @version 1.0
*/
public abstract class AbstractUtility {
- private static final Logger logger = Logger.getLogger(AbstractUtility.class);
+ protected static final Logger logger = LogManager.getLogger(AbstractUtility.class);
/** Constant <code>statusLineManager</code> */
protected static IStatusLineManager statusLineManager;
/** Constant <code>DATE_FORMAT_NOW="yyyyMMddHHmm"</code> */
public static final String DATE_FORMAT_NOW = "yyyyMMddHHmm";
- public static boolean closeAll() {
- if(getActivePage()!=null){
- return getActivePage().closeAllEditors(true);
- }
- return false;
- }
-
- /**
- * Close the given editor.
- *
- * @param editor
- * The <tt>MultipageTaxonEditor</tt> to close.
- * @return <tt>true</tt> on success
- */
- public static boolean close(EditorPart editor) {
- return getActivePage() != null ? getActivePage().closeEditor(editor, true):false;
- }
-
- public static Shell getShell() {
-
- return TaxeditorStorePlugin.getDefault().getWorkbench()
- .getActiveWorkbenchWindow().getShell();
- }
-
- public static IWorkbenchPage getActivePage() {
- try{
- return TaxeditorStorePlugin.getDefault().getWorkbench()
- .getActiveWorkbenchWindow().getActivePage();
- } catch(NullPointerException npe){
- return null;
- }
- }
-
- public static IWorkbenchPart getActiveWorkbenchPart() {
- IWorkbenchPage activePage = getActivePage();
- if(activePage!=null){
- IWorkbenchPart activePart = activePage.getActivePart();
- if(activePart!=null){
- return activePart;
- }
+ public static Object getActivePart() {
+ MPart activePart = EventUtility.getActivePart();
+ if(activePart!=null){
+ return activePart.getObject();
}
return null;
}
- public static Object getActiveE4Part() {
- IWorkbenchPage activePage = getActivePage();
- if(activePage!=null){
- IWorkbenchPart activePart = activePage.getActivePart();
- Object e4WrappedPart = WorkbenchUtility.getE4WrappedPart(activePart);
- return e4WrappedPart!=null?e4WrappedPart:activePart;
- }
- return null;
+ public static Shell getShell() {
+ return EventUtility.getShell();
}
public static IWorkbench getWorkbench() {
return TaxeditorStorePlugin.getDefault().getWorkbench();
}
- public static IWorkbenchWindow getWorkbenchWindow() {
- if (getWorkbench().getWorkbenchWindowCount() > 1) {
- throw new IllegalStateException("More than one workbench window");
- }
- return getWorkbench().getWorkbenchWindows()[0];
- }
-
- public static IViewPart showView(String id) {
- try {
- return PlatformUI.getWorkbench().getActiveWorkbenchWindow()
- .getActivePage()
- .showView(id, null, IWorkbenchPage.VIEW_VISIBLE);
- } catch (PartInitException e) {
- MessagingUtils.messageDialog("Error opening view", AbstractUtility.class, "Could not open view: " + id, e);
- return null;
- }
- }
-
- public static void hideView(IViewPart view) {
- PlatformUI.getWorkbench().getActiveWorkbenchWindow().getActivePage()
- .hideView(view);
- }
-
- public static IViewPart getView(String id, boolean restore) {
- IWorkbench workbench = PlatformUI.getWorkbench();
- IWorkbenchWindow activeWorkbenchWindow = workbench.getActiveWorkbenchWindow();
- IViewReference[] references = null;
- if(activeWorkbenchWindow!=null && activeWorkbenchWindow.getActivePage()!=null){
- references = activeWorkbenchWindow.getActivePage().getViewReferences();
- }
- else if(workbench.getWorkbenchWindows().length>0 && workbench.getWorkbenchWindows()[0].getActivePage()!=null){
- references = workbench.getWorkbenchWindows()[0].getActivePage().getViewReferences();
- }
- if(references!=null){
- for (IViewReference reference : references) {
- if (reference.getId().equals(id)) {
- return reference.getView(restore);
- }
- }
- }
- return null;
- }
-
+ @SuppressWarnings("unchecked")
public static Object getService(Class api) {
return TaxeditorStorePlugin.getDefault().getWorkbench().getService(api);
}
- public static ITheme getCurrentTheme() {
- IThemeManager themeManager = TaxeditorStorePlugin.getDefault()
- .getWorkbench().getThemeManager();
- return themeManager.getCurrentTheme();
- }
-
- /**
- * Fonts registered to the plugin may be obtained with the Eclipse themeing
- * functionality. Thus fonts are chooseable by the user via
- * Preferences->General->Appearance->Colors and Fonts
- *
- * @return the FontRegistry for the current theme
- */
- public static FontRegistry getFontRegistry() {
- return getCurrentTheme().getFontRegistry();
- }
-
public static Font getFont(String symbolicName) {
- return getFontRegistry().get(symbolicName);
- }
-
- /**
- * Color registered to the plugin may be obtained with the Eclipse themeing
- * functionality. Thus colors are editable by the user via
- * Preferences->General->Appearance->Colors and Fonts
- *
- * @return the ColorRegistry for the current theme
- */
- public static ColorRegistry getColorRegistry() {
- return getCurrentTheme().getColorRegistry();
+ return FontResources.getFont(symbolicName);
}
public static Color getColor(String symbolicName) {
- return getColorRegistry().get(symbolicName);
+ return ColorResources.getColor(symbolicName);
}
- public static IStatus executeOperation(final AbstractPostOperation operation) {
+ public static IStatus executeOperation(final AbstractPostOperation operation, UISynchronize sync) {
if (getOperationHistory() == null) {
throw new IllegalArgumentException(
"There is no operation history for this context");
}
- final IAdaptable uiInfoAdapter = WorkspaceUndoUtil
- .getUIInfoAdapter(getShell());
-
- IRunnableWithProgress runnable = new IRunnableWithProgress() {
+ final IAdaptable uiInfoAdapter = WorkspaceUndoUtil.getUIInfoAdapter(getShell());
- @Override
- public void run(IProgressMonitor monitor)
- throws InvocationTargetException, InterruptedException {
+ Job job = Job.create(operation.getLabel(), (ICoreRunnable) monitor -> {
+ sync.syncExec(() -> {
String operationlabel = operation.getLabel();
monitor.beginTask(operationlabel, 100);
IStatus status = Status.CANCEL_STATUS;
try {
operation.addContext(IOperationHistory.GLOBAL_UNDO_CONTEXT);
- status = getOperationHistory().execute(operation, monitor,
- uiInfoAdapter);
+ status = operation.execute(monitor, uiInfoAdapter);
} catch (ExecutionException e) {
- MessagingUtils.operationDialog(this, e, TaxeditorStorePlugin.PLUGIN_ID, operationlabel, null);
+ MessagingUtils.operationDialog(AbstractUtility.class, e, TaxeditorStorePlugin.PLUGIN_ID, operationlabel, null);
} finally {
monitor.done();
String statusString = status.equals(Status.OK_STATUS) ? "completed"
: "cancelled";
setStatusLine(operationlabel + " " + statusString + ".");
-
- }
- };
+ IPostOperationEnabled postOperationEnabled = operation
+ .getPostOperationEnabled();
+ if (postOperationEnabled != null) {
+ postOperationEnabled.onComplete();
+ }
+ });
+ });
try {
- runInUI(runnable, null);
+ job.setUser(true);
+ job.schedule();
} catch (Exception e) {
- MessagingUtils.messageDialog("Error executing operation", AbstractUtility.class, "An error occured while executing " + operation.getLabel(), e);
+ MessagingUtils.messageDialog("Error executing operation", AbstractUtility.class, "An error occurred while executing " + operation.getLabel(), e);
}
- IPostOperationEnabled postOperationEnabled = operation
- .getPostOperationEnabled();
- if (postOperationEnabled != null) {
- postOperationEnabled.onComplete();
- }
return Status.OK_STATUS;
}
- public static IStatus executeOperation(final AbstractOperation operation, final RemotingCdmHandler handler) {
+ public static IStatus executeOperation(final AbstractOperation operation, final CdmHandlerE4 handler, UISynchronize sync) {
+ return executeOperation_internal(operation, handler, sync);
+ }
+
+ private static IStatus executeOperation_internal(final AbstractOperation operation, final CdmHandlerE4 handler,
+ UISynchronize sync) {
if (getOperationHistory() == null) {
throw new IllegalArgumentException(
"There is no operation history for this context");
final IAdaptable uiInfoAdapter = WorkspaceUndoUtil
.getUIInfoAdapter(getShell());
- IRunnableWithProgress runnable = new IRunnableWithProgress() {
- @Override
- public void run(IProgressMonitor monitor)
- throws InvocationTargetException, InterruptedException {
+ Job job = Job.create(operation.getLabel(), (ICoreRunnable) monitor -> {
+ sync.syncExec(() -> {
String operationlabel = operation.getLabel();
monitor.beginTask(operationlabel, 100);
IStatus status = Status.CANCEL_STATUS;
try {
operation.addContext(IOperationHistory.GLOBAL_UNDO_CONTEXT);
- status = getOperationHistory().execute(operation, monitor,
+ status = operation.execute(monitor,
uiInfoAdapter);
- if(handler != null) {
- handler.postOperation(status);
- }
+ handler.postOperation(status);
} catch (ExecutionException e) {
- MessagingUtils.operationDialog(this, e, TaxeditorStorePlugin.PLUGIN_ID, operationlabel, null);
+ MessagingUtils.operationDialog(AbstractUtility.class, e, TaxeditorStorePlugin.PLUGIN_ID, operationlabel, null);
} finally {
monitor.done();
}
String statusString = status.equals(Status.OK_STATUS) ? "completed"
: "cancelled";
setStatusLine(operationlabel + " " + statusString + ".");
-
- }
- };
+ });
+ });
try {
- runInUI(runnable, null);
+ job.setUser(true);
+ sync.syncExec(()->job.schedule());
} catch (Exception e) {
- MessagingUtils.messageDialog("Error executing operation", AbstractUtility.class, "An error occured while executing " + operation.getLabel(), e);
+ MessagingUtils.messageDialog("Error executing operation", AbstractUtility.class, "An error occurred while executing " + operation.getLabel(), e);
}
return Status.OK_STATUS;
if(firstRemotingMonitor == null) {
throw new IllegalStateException("Remoting progress monitor is null");
}
+ if (firstRemotingMonitor.isDone()){
+ createExportResult(label, urlString, createZip, firstRemotingMonitor);
+ }
Job job = new Job(label) {
@Override
public IStatus run(IProgressMonitor monitor) {
// run the monitor until the operation is finished
- monitor.beginTask("Start", 100);
+ SubMonitor subMonitor = SubMonitor.convert(monitor, 100);
+ //subMonitor.beginTask("Start", 100);
IRemotingProgressMonitor remotingMonitor;
try {
remotingMonitor = CdmStore.getProgressMonitorClientManager().pollMonitor(label,
pollInterval,
postOp,
feedbackGenerator,
- monitor);
+ subMonitor);
} catch (Exception ex) {
- return new Status(Status.ERROR, TaxeditorStorePlugin.PLUGIN_ID, "Operation Interrupted", ex);
- }
- final StringBuilder reportSb = new StringBuilder();
- if (remotingMonitor.getResult() instanceof ExportResult){
- ExportResult result = (ExportResult)remotingMonitor.getResult();
-
- reportSb.append(result.createReport());
-
- if(!StringUtils.isBlank(reportSb.toString())) {
- Display.getDefault().asyncExec(new Runnable() {
- @Override
- public void run() {
- // display reports with possibility to save
- ReportTextDialog dialog = new ReportTextDialog(PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell());
- dialog.setTitle(label + " Report");
- dialog.setReportText(reportSb.toString());
- dialog.open();
- }
- });
- }
-
- if (urlString != null){
- ExportDataWrapper data = result.getExportData();
- try{
- if (result.getExportData().getType().equals(ExportResultType.BYTE_ARRAY)){
- byte[] exportData = (byte[])data.getExportData();
- if(exportData != null){
- File file = new File(urlString);
- FileOutputStream stream = new FileOutputStream(file);
- Writer out = new BufferedWriter(new OutputStreamWriter(
- stream, "UTF8"));
-
- stream.write(exportData);
- out.flush();
- stream.close();
- }
- } else if (result.getExportData().getType().equals(ExportResultType.MAP_BYTE_ARRAY)){
- Map<String, byte[]> resultMap = (Map<String, byte[]>)data.getExportData();
- Set<String> keySet = resultMap.keySet();
- SimpleDateFormat sdf = new SimpleDateFormat(DATE_FORMAT_NOW);
- Calendar cal = Calendar.getInstance();
- String fileEnding = ".csv";
-
- if (createZip){
- File file = new File(urlString+File.separator + sdf.format(cal.getTime())+ ".zip");
- FileOutputStream stream = new FileOutputStream(file);
- ZipOutputStream zos = new ZipOutputStream(stream);
- for (String key: keySet){
- byte[] fileData = resultMap.get(key);
- ZipEntry entry = new ZipEntry( key + fileEnding);
- zos.putNextEntry(entry);
- zos.write(fileData);
- zos.closeEntry();
- }
- zos.close();
- }else{
- for (String key: keySet){
- byte[] fileData = resultMap.get(key);
- File file = new File(urlString+File.separator + key + fileEnding);
- FileOutputStream stream = new FileOutputStream(file);
- Writer out = new BufferedWriter(new OutputStreamWriter(
- stream, "UTF8"));
- stream.write(fileData);
- stream.close();
- }
- }
- }else{
- logger.error("This kind of result data is not supported yet." + result.getExportData().getType().toString());
- }
- } catch(Exception e){
- logger.error(e.getStackTrace());
- }
- }
+ return new Status(IStatus.ERROR, TaxeditorStorePlugin.PLUGIN_ID, "Operation Interrupted", ex);
}
+
+ createExportResult(label, urlString, createZip, remotingMonitor);
return Status.OK_STATUS;
}
+
+
@Override
protected void canceling() {
CdmStore.getCurrentApplicationConfiguration().getProgressMonitorService().cancel(uuid);
// configure the job
job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
job.setUser(true);
+ job.setName(label);
// schedule job
job.schedule();
} catch (Exception e) {
MessagingUtils.errorDialog("Error executing operation",
AbstractUtility.class,
- "An error occured while executing " + label,
+ "An error occurred while executing " + label,
TaxeditorStorePlugin.PLUGIN_ID,
e,
true);
newMonitor.worked(steps);
}
- /**
- * Present a progress dialog to the user. This dialog will block the UI
- *
- * @param runnable
- * an implementation of {@link IRunnableWithProgress}
- * @throws java.lang.InterruptedException
- * if any.
- * @throws java.lang.reflect.InvocationTargetException
- * if any.
- */
- public static void busyCursorWhile(IRunnableWithProgress runnable)
- throws InvocationTargetException, InterruptedException {
- getProgressService().busyCursorWhile(runnable);
- }
-
- public static void runInUI(IRunnableWithProgress runnable,
- ISchedulingRule rule) throws InvocationTargetException,
- InterruptedException {
- getProgressService().runInUI(getWorkbenchWindow(), runnable, rule);
- }
-
- public static void run(boolean fork, boolean cancelable,
- IRunnableWithProgress runnable) throws InvocationTargetException,
- InterruptedException {
- getProgressService().run(fork, cancelable, runnable);
- }
-
- public static IProgressService getProgressService() {
- IWorkbench workbench = PlatformUI.getWorkbench();
- return workbench.getProgressService();
- }
-
- public static IWorkbenchSiteProgressService getProgressService2() {
- return (IWorkbenchSiteProgressService) getService(IWorkbenchSiteProgressService.class);
- }
-
public static String getPluginId() {
return "eu.taxeditor";
}
- public static IEditorPart getActiveEditor() {
- return getActivePage() != null ? getActivePage().getActiveEditor()
- : null;
- }
-
- public static Object getActiveE4Editor() {
- if(getActivePage()!=null){
- IEditorPart activeEditor = getActivePage().getActiveEditor();
- Object wrappedPart = WorkbenchUtility.getE4WrappedPart(getActivePage().getActivePart());
- return wrappedPart!=null?wrappedPart:activeEditor;
+ public static Object getActiveEditor() {
+ MPart activePart = EventUtility.getActivePart();
+ if(activePart!=null && activePart.getObject()!=null
+ && activePart.getObject() instanceof IE4SavablePart){
+ return activePart.getObject();
}
return null;
}
- public static DetailsViewPart getDetailsView() {
- return (DetailsViewPart) getView(DetailsViewPart.ID, false);
- }
-
- public static void refreshDetailsViewer() {
- if (getDetailsView() != null) {
- ((AbstractCdmDataViewer) getDetailsView().getViewer()).refresh();
+ public static DetailsPartE4 getDetailsView(EPartService partService) {
+ MPart part = partService.findPart("eu.etaxonomy.taxeditor.view.e4.details.DetailsPartE4");
+ if(part!=null){
+ return (DetailsPartE4) part.getObject();
}
+ return null;
}
- public static void reflowDetailsViewer() {
- if (getDetailsView() != null) {
- ((AbstractCdmDataViewer) getDetailsView().getViewer()).reflow();
+ public static void refreshDetailsViewer(EPartService partService) {
+ if (getDetailsView(partService) != null) {
+ ((AbstractCdmDataViewer) getDetailsView(partService).getViewer()).refresh();
}
}
- public static SupplementalDataViewPart getSupplementalDataView() {
- return (SupplementalDataViewPart) getView(SupplementalDataViewPart.ID,
- false);
- }
-
- public static void reflowSupplementalViewer() {
- if (getSupplementalDataView() != null) {
- ((AbstractCdmDataViewer) getSupplementalDataView().getViewer())
- .reflow();
+ public static void reflowDetailsViewer(EPartService partService) {
+ if (getDetailsView(partService) != null) {
+ ((AbstractCdmDataViewer) getDetailsView(partService).getViewer()).reflow();
}
}
if(depth>0){
indentString += "- ";
}
- result.put(node.term, indentString + node.term.getMessage());
+ result.put(node.term, indentString + node.term.getLabel());
parseTermTree(node.children, result, depth);
}
}
if (getClass() != obj.getClass()) {
return false;
}
- TermNode other = (TermNode) obj;
+ TermNode<?> other = (TermNode<?>) obj;
if (term == null) {
if (other.term != null) {
return false;
@Override
public int compareTo(TermNode<T> that) {
- return this.term.getMessage().compareTo(that.term.getMessage());
- }
- }
-
-
- public static void executeCommand(String commandId, Object source, String pluginId) {
- IHandlerService handlerService = (IHandlerService) AbstractUtility.getService(IHandlerService.class);
- Exception exception = null;
- try {
- handlerService.executeCommand(commandId, null);
- } catch (ExecutionException e) {
- exception = e;
- } catch (NotDefinedException e) {
- exception = e;
- } catch (NotEnabledException e) {
- exception = e;
- } catch (NotHandledException e) {
- exception = e;
- } finally {
- if(exception != null) {
- MessagingUtils.errorDialog("Error executing command",
- source,
- "Could not execute command with id " + commandId ,
- pluginId,
- exception,
- true);
- }
+ return this.term.getLabel().compareTo(that.term.getLabel());
}
}
final int pollInterval,
final boolean cancelable,
final IPostMoniteredOperationEnabled postOp,
- final IFeedbackGenerator feedbackGenerator) {
-
+ final IFeedbackGenerator feedbackGenerator,
+ final boolean showResult,
+ final boolean updateNavigator) {
+
try{
// get the remoting monitor the first time to make sure that the
// operation is valid
if(firstRemotingMonitor == null) {
throw new IllegalStateException("Remoting progress monitor is null");
}
+ if (firstRemotingMonitor.isDone()){
+ createResult(label, showResult, firstRemotingMonitor);
+ Set<Taxon> taxaToUpdate = getTaxaToUpdate(firstRemotingMonitor);
+ updateNameEditors(taxaToUpdate);
+ return Status.OK_STATUS;
+ }
Job job = new Job(label) {
-
-
@Override
public IStatus run(IProgressMonitor monitor) {
// run the monitor until the operation is finished
- monitor.beginTask("Start", 100);
+ SubMonitor subMonitor = SubMonitor.convert(monitor, 100);
+
+
IRemotingProgressMonitor remotingMonitor;
try {
remotingMonitor = CdmStore.getProgressMonitorClientManager().pollMonitor(label,
pollInterval,
postOp,
feedbackGenerator,
- monitor);
+ subMonitor);
} catch (Exception ex) {
- return new Status(Status.ERROR, TaxeditorStorePlugin.PLUGIN_ID, "Operation Interrupted", ex);
+ return new Status(IStatus.ERROR, TaxeditorStorePlugin.PLUGIN_ID, "Operation Interrupted", ex);
}
- final StringBuilder reportSb = new StringBuilder();
+
// collect reports
// for(String report : remotingMonitor.getResult()) {
- reportSb.append(((ExportResult)remotingMonitor.getResult()).createReport());
-// }
- if(!StringUtils.isBlank(reportSb.toString())) {
- Display.getDefault().asyncExec(new Runnable() {
- @Override
- public void run() {
- // display reports with possibility to save
- ReportTextDialog dialog = new ReportTextDialog(PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell());
- dialog.setTitle(label + " Report");
- dialog.setReportText(reportSb.toString());
- dialog.open();
- }
- });
+ createResult(label, showResult, remotingMonitor);
+ Set<Taxon> taxaToUpdate = getTaxaToUpdate(remotingMonitor);
+ updateNameEditors(taxaToUpdate);
+ if (!taxaToUpdate.isEmpty() && updateNavigator){
+ refreshNavigator();
}
+ subMonitor.subTask("");
return Status.OK_STATUS;
}
+ private void refreshNavigator() {
+ EventUtility.postEvent(WorkbenchEventConstants.REFRESH_NAVIGATOR, true);
+ }
+
@Override
protected void canceling() {
CdmStore.getCurrentApplicationConfiguration().getProgressMonitorService().cancel(uuid);
// configure the job
job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+
job.setUser(true);
// schedule job
job.schedule();
} catch (Exception e) {
MessagingUtils.errorDialog("Error executing operation",
AbstractUtility.class,
- "An error occured while executing " + label,
+ "An error occurred while executing " + label,
TaxeditorStorePlugin.PLUGIN_ID,
e,
true);
}
return Status.OK_STATUS;
+ }
+
+ private static Set<Taxon> getTaxaToUpdate(IRemotingProgressMonitor remotingMonitor) {
+ Set<Taxon> taxaToUpdate = new HashSet<>();
+ if (remotingMonitor != null && remotingMonitor.getResult() instanceof UpdateResult){
+ for (CdmBase object: ((UpdateResult)remotingMonitor.getResult()).getUpdatedObjects()){
+ Taxon taxon = null;
+
+ if (object instanceof Taxon){
+ taxon = HibernateProxyHelper.deproxy(object, Taxon.class);
+ }else if (object instanceof Synonym){
+ Synonym syn = HibernateProxyHelper.deproxy(object, Synonym.class);
+ taxon = syn.getAcceptedTaxon();
+ }else if (object instanceof TaxonNode){
+ taxon = ((TaxonNode)object).getTaxon() != null? ((TaxonNode)object).getTaxon():null;
+ }
+ if (taxon != null){
+ taxaToUpdate.add(taxon);
+ }
+ }
+ }
+ return taxaToUpdate;
+ }
+
+ public static void createResult(String label, boolean showResult,
+ IRemotingProgressMonitor remotingMonitor) {
+ final StringBuilder reportSb = new StringBuilder();
+ if (remotingMonitor == null){
+ reportSb.append("Something went wrong. No result returned from server.");
+ }else if (remotingMonitor.getResult() instanceof ExportResult) {
+ reportSb.append(((ExportResult)remotingMonitor.getResult()).createReport());
+ }else if (remotingMonitor.getResult() instanceof UpdateResult){
+ UpdateResult result = (UpdateResult)remotingMonitor.getResult();
+ createUpdateResultReport(reportSb, result);
+ }else if (remotingMonitor.getReports()!= null){
+ for (String o:remotingMonitor.getReports()){
+ reportSb.append(o);
+ }
+ }
+ String report = reportSb.toString();
+ if(showResult && !StringUtils.isBlank(report)) {
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ // display reports with possibility to save
+ ReportTextDialog dialog = new ReportTextDialog(PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell());
+ dialog.setTitle(label + " Report");
+ dialog.setReportText(report);
+ dialog.open();
+ }
+ });
+ }
+ }
+
+ public static void createUpdateResultReport(final StringBuilder reportSb, UpdateResult result) {
+ if (result.isOk() || result.isAbort()){
+ SetMap<Class<? extends CdmBase>, Integer> map = getUpdateResultStatistics(result);
+ reportSb.append("Update successful. \n"
+ + "Updated Objects: " + map.sizeAll() + "\n================\n");
+ for (Class<? extends CdmBase> clazz : map.keySet()){
+ reportSb.append( CdmUtils.userFriendlyClassName(clazz)+": " + map.get(clazz).size() + "\n");
+ }
+ }
+ if (!result.getExceptions().isEmpty()){
+ reportSb.append(result.getExceptions().toString());
+ }
+ }
+
+ //TODO move to cdmlib
+ public static SetMap<Class<? extends CdmBase>, Integer> getUpdateResultStatistics(UpdateResult result) {
+ SetMap<Class<? extends CdmBase>, Integer> map = new SetMap<>();
+ for (CdmBase cdmBase : result.getUpdatedObjects()){
+ map.putItem(cdmBase.getClass(), cdmBase.getId());
+ }
+ for (CdmEntityIdentifier entity : result.getUpdatedCdmIds()){
+ map.putItem(entity.getCdmClass(), entity.getId());
}
-}
+ return map;
+ }
+
+ private static void createExportResult(final String label, String urlString, boolean createZip,
+ IRemotingProgressMonitor remotingMonitor) {
+
+ final StringBuilder reportSb = new StringBuilder();
+ if (remotingMonitor.getResult() instanceof ExportResult){
+ ExportResult result = (ExportResult)remotingMonitor.getResult();
+
+ reportSb.append(result.createReport());
+
+ if(!StringUtils.isBlank(reportSb.toString())) {
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ // display reports with possibility to save
+ ReportTextDialog dialog = new ReportTextDialog(PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell());
+ dialog.setTitle(label + " Report");
+ dialog.setReportText(reportSb.toString());
+ dialog.open();
+ }
+ });
+ }
+
+ if (urlString != null){
+ ExportDataWrapper<?> data = result.getExportData();
+ try{
+ if (result.getExportData().getType().equals(ExportResultType.BYTE_ARRAY)){
+ byte[] exportData = (byte[])data.getExportData();
+ if(exportData != null){
+ File file = new File(urlString);
+ FileOutputStream stream = new FileOutputStream(file);
+ Writer out = new BufferedWriter(new OutputStreamWriter(
+ stream, "UTF8"));
+
+ stream.write(exportData);
+ out.flush();
+ stream.close();
+ }
+ } else if (result.getExportData().getType().equals(ExportResultType.MAP_BYTE_ARRAY)){
+ Map<String, byte[]> resultMap = (Map<String, byte[]>)data.getExportData();
+ Set<String> keySet = resultMap.keySet();
+ SimpleDateFormat sdf = new SimpleDateFormat(DATE_FORMAT_NOW);
+ Calendar cal = Calendar.getInstance();
+ String fileEnding = ".csv";
+
+ if (createZip){
+// File file = new File(urlString+File.separator + sdf.format(cal.getTime())+ ".zip");
+ File file = new File(urlString+ ".zip");
+ FileOutputStream stream = new FileOutputStream(file);
+ ZipOutputStream zos = new ZipOutputStream(stream);
+ for (String key: keySet){
+ byte[] fileData = resultMap.get(key);
+ ZipEntry entry = new ZipEntry( key + fileEnding);
+ zos.putNextEntry(entry);
+ zos.write(fileData);
+ zos.closeEntry();
+ }
+ zos.close();
+ }else{
+ if(result.getExportType().equals(ExportType.DWCA)){
+
+ File file = new File(urlString);
+ FileOutputStream stream = new FileOutputStream(file);
+ ZipOutputStream zos = new ZipOutputStream(stream);
+ for (String key: keySet){
+ byte[] fileData = resultMap.get(key);
+ ZipEntry entry = new ZipEntry( key);
+ zos.putNextEntry(entry);
+ zos.write(fileData);
+ zos.closeEntry();
+ }
+ zos.close();
+ }else{
+ for (String key: keySet){
+ byte[] fileData = resultMap.get(key);
+ File file = new File(urlString+File.separator + key + fileEnding);
+ FileOutputStream stream = new FileOutputStream(file);
+ Writer out = new BufferedWriter(new OutputStreamWriter(
+ stream, "UTF8"));
+ stream.write(fileData);
+ stream.close();
+ }
+ }
+ }
+ }else{
+ logger.error("This kind of result data is not supported yet." + result.getExportData().getType().toString());
+ }
+ } catch(Exception e){
+ logger.error(e.getStackTrace());
+ e.printStackTrace();
+ }
+ }
+ }
+ }
+
+ public static void updateNameEditors(Set<Taxon> taxaToUpdate){
+ for (Taxon tax: taxaToUpdate){
+ if (tax != null){
+ EventUtility.postEvent(WorkbenchEventConstants.REFRESH_NAME_EDITOR, tax.getUuid());
+ }
+ }
+ }
+}
\ No newline at end of file