cdmlib.git
10 years ago[maven-release-plugin] prepare release cdmlib-parent-3.3.6 root/tags/cdmlib/cdmlib-parent-3.3.6 cdmlib-parent-3.3.6
edit-jenkins [Tue, 8 Jul 2014 09:39:15 +0000 (09:39 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.6

10 years agominor
Andreas Müller [Tue, 8 Jul 2014 08:19:13 +0000 (08:19 +0000)]
minor

10 years agoimplementation for #4268 (allow defining custom presence and absence term colors...
Andreas Kohlbecker [Tue, 8 Jul 2014 05:02:12 +0000 (05:02 +0000)]
implementation for #4268 (allow defining custom presence and absence term colors for EditGeoServiceUtilities) and removing obsolete termservice parameters

10 years agominor
Andreas Müller [Fri, 4 Jul 2014 23:33:55 +0000 (23:33 +0000)]
minor

10 years agofixing NPE in DescriptionListController
Andreas Kohlbecker [Fri, 4 Jul 2014 13:13:13 +0000 (13:13 +0000)]
fixing NPE in DescriptionListController

10 years agoadding nameCache of NonViralNames to responses of rest services
Andreas Kohlbecker [Thu, 3 Jul 2014 16:05:46 +0000 (16:05 +0000)]
adding nameCache of NonViralNames to responses of rest services

10 years ago - removed unused query method
Patric Plitzner [Thu, 3 Jul 2014 08:34:57 +0000 (08:34 +0000)]
 - removed unused query method
 - removed default access point
 - adapted test

10 years agominor
Andreas Müller [Wed, 2 Jul 2014 16:23:59 +0000 (16:23 +0000)]
minor

10 years agofix for last commit
Andreas Müller [Wed, 2 Jul 2014 16:10:44 +0000 (16:10 +0000)]
fix for last commit

10 years agoreverting temp fix made for https://dev.e-taxonomy.eu/trac/ticket/2707#comment:24...
Andreas Kohlbecker [Wed, 2 Jul 2014 15:58:10 +0000 (15:58 +0000)]
reverting temp fix made for https://dev.e-taxonomy.eu/trac/ticket/2707#comment:24 by configuration in EditGeoServiceUtilities - but leaving code for now

10 years agocreate new vocabulary for MediaSpecimenKindOfUnit, move Detail image and Specimen...
Andreas Müller [Wed, 2 Jul 2014 15:57:20 +0000 (15:57 +0000)]
create new vocabulary for MediaSpecimenKindOfUnit, move Detail image and Specimen scan from old to new vocabulary and create new terms Living plant photo and Artwork  #4269

10 years agofixing #4278 for FeatureNode
Andreas Müller [Wed, 2 Jul 2014 14:16:13 +0000 (14:16 +0000)]
fixing #4278 for FeatureNode

10 years agofixing #4278 for PolytomousKeys
Andreas Müller [Wed, 2 Jul 2014 14:11:26 +0000 (14:11 +0000)]
fixing #4278 for PolytomousKeys

10 years agoadditional test for sortindex handling #4200
Andreas Müller [Wed, 2 Jul 2014 13:43:03 +0000 (13:43 +0000)]
additional test for sortindex handling #4200

10 years agoalternative for protected: deproxy #4200
Andreas Müller [Wed, 2 Jul 2014 13:42:05 +0000 (13:42 +0000)]
alternative for protected: deproxy  #4200

10 years agominor
Andreas Müller [Wed, 2 Jul 2014 13:21:33 +0000 (13:21 +0000)]
minor

10 years agotest for #4200
Andreas Müller [Wed, 2 Jul 2014 13:19:14 +0000 (13:19 +0000)]
test for #4200

10 years agocleaning up TaxonNode class and also refactoring solution for #4200
Andreas Müller [Wed, 2 Jul 2014 13:17:43 +0000 (13:17 +0000)]
cleaning up TaxonNode class and also refactoring solution for #4200

10 years agofixing sortindex issue #4200
Andreas Müller [Wed, 2 Jul 2014 08:46:05 +0000 (08:46 +0000)]
fixing sortindex issue #4200

10 years agominor
Andreas Müller [Wed, 2 Jul 2014 08:45:38 +0000 (08:45 +0000)]
minor

10 years agominor
Andreas Müller [Tue, 1 Jul 2014 13:14:41 +0000 (13:14 +0000)]
minor

10 years agoremoved 2.6.9 api
Cherian Mathew [Tue, 1 Jul 2014 10:32:45 +0000 (10:32 +0000)]
removed 2.6.9 api

10 years agoupdated javadoc
Cherian Mathew [Tue, 1 Jul 2014 09:33:40 +0000 (09:33 +0000)]
updated javadoc

10 years agoadd doc / comments
Cherian Mathew [Tue, 1 Jul 2014 09:30:24 +0000 (09:30 +0000)]
add doc / comments

10 years agoconvenience access for new kindOfUnit uuids #4269
Andreas Müller [Mon, 30 Jun 2014 16:04:53 +0000 (16:04 +0000)]
convenience access for new kindOfUnit uuids  #4269

10 years agoadd detail image and specimen scan to kindOfUnit vocabulary #4269
Andreas Müller [Mon, 30 Jun 2014 15:59:02 +0000 (15:59 +0000)]
add detail image and specimen scan to kindOfUnit vocabulary  #4269

10 years agoadded comment for null values
Cherian Mathew [Fri, 27 Jun 2014 09:49:37 +0000 (09:49 +0000)]
added comment for null values

10 years agoIService, ServiceBase : added method findWithoutFlush
Cherian Mathew [Thu, 26 Jun 2014 15:03:58 +0000 (15:03 +0000)]
IService, ServiceBase : added method findWithoutFlush
CdmCacher, CdmDaoCacher : split CdmCacher class to sub class which uses dao to access the data
MockCdmCacher : added mock cdm cacher for tests
TaxonNodeServiceImplTest, FeatureNodeServiceImplTest : removed duplicate @SpringApplicationContext annotation
IdentifiableServiceBaseTest, TaxonServiceSearchTest : reverted @Ignore on failing tests
TaxonServiceSearchTest : added mock cdm cacher
SecurityTest : removed duplicate PlatformTransactionManager autowiring
CdmCacherTest : extended test

10 years agoadded comment for mock cdm cacher
Cherian Mathew [Thu, 26 Jun 2014 14:57:49 +0000 (14:57 +0000)]
added comment for mock cdm cacher

10 years agoadded findByUuidWithoutFlush method
Cherian Mathew [Thu, 26 Jun 2014 13:49:53 +0000 (13:49 +0000)]
added findByUuidWithoutFlush method

10 years agoremoved ehcache-2.6.9 api for now
Cherian Mathew [Wed, 25 Jun 2014 17:57:41 +0000 (17:57 +0000)]
removed ehcache-2.6.9 api for now

10 years agotemporarily ignoring failing tests to ensure compilation (see ticket 4276)
Cherian Mathew [Wed, 25 Jun 2014 17:20:32 +0000 (17:20 +0000)]
temporarily ignoring failing tests to ensure compilation (see ticket 4276)

10 years agoadded ehcache dependency
Cherian Mathew [Wed, 25 Jun 2014 16:25:05 +0000 (16:25 +0000)]
added ehcache dependency

10 years agoMockCdmCacher : added mock cdm cacher for tests in cdmlib-model
Cherian Mathew [Wed, 25 Jun 2014 16:18:34 +0000 (16:18 +0000)]
MockCdmCacher : added mock cdm cacher for tests in cdmlib-model
IdentifiableEntityTest : using mock cdm cacher in tests

10 years agoadded cdm cache for bean initialisation
Cherian Mathew [Wed, 25 Jun 2014 15:46:28 +0000 (15:46 +0000)]
added cdm cache for bean initialisation

10 years agoadding initial basic tests for cdm caching api
Cherian Mathew [Wed, 25 Jun 2014 14:48:43 +0000 (14:48 +0000)]
adding initial basic tests for cdm caching api

10 years agofixing #4273 (java.lang.ClassCastException in TaxonDaoHibernateImpl.countTaxaByCommo...
Andreas Kohlbecker [Wed, 25 Jun 2014 14:42:30 +0000 (14:42 +0000)]
fixing  #4273 (java.lang.ClassCastException in TaxonDaoHibernateImpl.countTaxaByCommonName() breaks taxon search) and most probably also other CommonName search related tickets

10 years agoclean up
Cherian Mathew [Wed, 25 Jun 2014 14:33:14 +0000 (14:33 +0000)]
clean up

10 years agoFirst commit for the CDM Caching api
Cherian Mathew [Wed, 25 Jun 2014 14:32:23 +0000 (14:32 +0000)]
First commit for the CDM Caching api
ICdmCacher, CdmCacher : CDM Cache class based on Ehcache
defaultApplicationContext.xml : added cache package to be component scanned
DefinedTermBase : new set/getCdmCacher method to make cacher available to term classes
Language : added methods which use the cache to load language terms
Rank : corrected default language call to use the new method
pom.xml : added ehcache dependency

10 years agomerged query call into one method to free connection resources
Cherian Mathew [Wed, 25 Jun 2014 14:21:53 +0000 (14:21 +0000)]
merged query call into one method to free connection resources

10 years agoremove some non-Javadocs
Andreas Müller [Wed, 25 Jun 2014 09:53:11 +0000 (09:53 +0000)]
remove some non-Javadocs

10 years agoauthentication for JAXB import
Andreas Müller [Wed, 25 Jun 2014 09:52:36 +0000 (09:52 +0000)]
authentication for JAXB import

10 years agoremove some comments and non-Javadocs
Andreas Müller [Wed, 25 Jun 2014 09:51:36 +0000 (09:51 +0000)]
remove some comments and non-Javadocs

10 years agofirst development for the export filter
Andreas Müller [Wed, 25 Jun 2014 09:49:06 +0000 (09:49 +0000)]
first development for the export filter

10 years agosolving probelms with the HttpStatusMessage class and potentially fixing a problem...
Andreas Kohlbecker [Mon, 23 Jun 2014 11:50:31 +0000 (11:50 +0000)]
solving probelms with the HttpStatusMessage class and potentially fixing a problem for palmweb with the image metadata display

10 years agominor
Andreas Müller [Mon, 23 Jun 2014 11:15:01 +0000 (11:15 +0000)]
minor

10 years agominor
Andreas Müller [Mon, 23 Jun 2014 11:14:22 +0000 (11:14 +0000)]
minor

10 years agominor changes mostly javadoc oder remove commented code
Andreas Müller [Mon, 23 Jun 2014 10:02:59 +0000 (10:02 +0000)]
minor changes mostly javadoc oder remove commented code

10 years agopreliminar solution to avoid problems due to #4263 (GeoServiceArea and IGeoServiceAre...
Andreas Kohlbecker [Thu, 19 Jun 2014 06:48:53 +0000 (06:48 +0000)]
preliminar solution to avoid problems due to #4263 (GeoServiceArea and IGeoServiceAreaMapping should manage mapping information per layer)

10 years agojavadoc
Andreas Müller [Wed, 18 Jun 2014 15:53:23 +0000 (15:53 +0000)]
javadoc

10 years ago - fixed drag&drop for media
Patric Plitzner [Wed, 18 Jun 2014 07:02:12 +0000 (07:02 +0000)]
 - fixed drag&drop for media

10 years ago - added functionality to filter assigned specimens in the DerivateSearchView (fixes...
Patric Plitzner [Mon, 16 Jun 2014 08:57:24 +0000 (08:57 +0000)]
 - added functionality to filter assigned specimens in the DerivateSearchView (fixes #4252)

10 years agofixing failing security test due to stricter handling of correct sort index
Andreas Müller [Sun, 15 Jun 2014 10:09:54 +0000 (10:09 +0000)]
fixing failing security test due to stricter handling of correct sort index

10 years agominor
Andreas Müller [Fri, 13 Jun 2014 13:32:02 +0000 (13:32 +0000)]
minor

10 years agosome java doc
Andreas Müller [Fri, 13 Jun 2014 10:02:26 +0000 (10:02 +0000)]
some java doc

10 years agostart bugfixing and refactoring sortindex handling in TaxonNode
Andreas Müller [Fri, 13 Jun 2014 09:46:45 +0000 (09:46 +0000)]
start bugfixing and refactoring sortindex handling in TaxonNode

10 years ago - added null check
Patric Plitzner [Wed, 11 Jun 2014 14:22:41 +0000 (14:22 +0000)]
 - added null check

10 years ago - added service method to term service that retrieves terms by TermType
Patric Plitzner [Tue, 10 Jun 2014 11:46:10 +0000 (11:46 +0000)]
 - added service method to term service that retrieves terms by TermType

10 years agolatest changes to taxonX import
Andreas Müller [Tue, 10 Jun 2014 09:52:56 +0000 (09:52 +0000)]
latest changes to taxonX import

10 years agoupdates to taxonX import
Andreas Müller [Sat, 7 Jun 2014 21:00:38 +0000 (21:00 +0000)]
updates to taxonX import

10 years agoallow zoonames with year behind whitespace, not comma
Andreas Müller [Sat, 7 Jun 2014 13:45:40 +0000 (13:45 +0000)]
allow zoonames with year behind whitespace, not comma

10 years agoremove deprecated method
Andreas Müller [Fri, 6 Jun 2014 20:58:06 +0000 (20:58 +0000)]
remove deprecated method

10 years agolatest updates to taxonX import
Andreas Müller [Fri, 6 Jun 2014 20:52:45 +0000 (20:52 +0000)]
latest updates to taxonX import

10 years agobetter handling of countries in gathering unit
Andreas Müller [Fri, 6 Jun 2014 20:52:11 +0000 (20:52 +0000)]
better handling of countries in gathering unit

10 years agoremove generate title
Andreas Müller [Fri, 6 Jun 2014 20:48:58 +0000 (20:48 +0000)]
remove generate title

10 years agominor
Andreas Müller [Fri, 6 Jun 2014 20:47:29 +0000 (20:47 +0000)]
minor

10 years agoremove deprecated method
Andreas Müller [Fri, 6 Jun 2014 20:45:24 +0000 (20:45 +0000)]
remove deprecated method

10 years agofix matching for Integer #4229
Andreas Müller [Fri, 6 Jun 2014 13:55:30 +0000 (13:55 +0000)]
fix matching for Integer  #4229

10 years agolatest changes to TaxonX import
Andreas Müller [Thu, 5 Jun 2014 14:03:27 +0000 (14:03 +0000)]
latest changes to TaxonX import

10 years agominor
Andreas Müller [Thu, 5 Jun 2014 12:19:06 +0000 (12:19 +0000)]
minor

10 years agofix "Error occurred when trying retrieve title for Named Area"
Andreas Müller [Tue, 3 Jun 2014 16:09:16 +0000 (16:09 +0000)]
fix "Error occurred when trying retrieve title for Named Area"

10 years agolatest changes to taxonX import
Andreas Müller [Tue, 3 Jun 2014 15:25:50 +0000 (15:25 +0000)]
latest changes to taxonX import

10 years agominor
Andreas Müller [Tue, 3 Jun 2014 14:41:33 +0000 (14:41 +0000)]
minor

10 years ago - made constructor protected to avoid JavaAssistEnhancementException (see https...
Patric Plitzner [Tue, 3 Jun 2014 14:35:08 +0000 (14:35 +0000)]
 - made constructor protected to avoid JavaAssistEnhancementException (see https://stackoverflow.com/questions/7273125/hibernate-envers-and-javassist-enhancement-failed-exception)

10 years ago - fixed documentation
Patric Plitzner [Tue, 3 Jun 2014 14:33:00 +0000 (14:33 +0000)]
 - fixed documentation

10 years ago - deleted invalid assert statement
Patric Plitzner [Tue, 3 Jun 2014 06:38:13 +0000 (06:38 +0000)]
 - deleted invalid assert statement

10 years agofix for TaxonComparatorSearch
Andreas Müller [Mon, 2 Jun 2014 16:53:25 +0000 (16:53 +0000)]
fix for TaxonComparatorSearch

10 years ago - completed implementation of querying for the original unit from a GBIF response
Patric Plitzner [Mon, 2 Jun 2014 13:51:04 +0000 (13:51 +0000)]
 - completed implementation of querying for the original unit from a GBIF response

10 years ago - added service methods for querying original record via BioCASE if found in GBIF...
Patric Plitzner [Mon, 2 Jun 2014 09:41:52 +0000 (09:41 +0000)]
 - added service methods for querying original record via BioCASE if found in GBIF response

10 years agocorrected query to taxonUuid
Cherian Mathew [Fri, 30 May 2014 10:35:45 +0000 (10:35 +0000)]
corrected query to taxonUuid

10 years ago[maven-release-plugin] prepare for next development iteration
edit-jenkins [Fri, 30 May 2014 07:56:35 +0000 (07:56 +0000)]
[maven-release-plugin] prepare for next development iteration

10 years ago[maven-release-plugin] prepare release cdmlib-parent-3.3.5
edit-jenkins [Fri, 30 May 2014 07:56:31 +0000 (07:56 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.5

10 years agoset sorting in getChildNodes optional & minor for delete in bulk editor
Katja Luther [Thu, 29 May 2014 20:47:01 +0000 (20:47 +0000)]
set sorting in getChildNodes optional & minor for delete in bulk editor

10 years agoimprove to better fulfill the Comparator contract
Andreas Müller [Wed, 28 May 2014 23:34:22 +0000 (23:34 +0000)]
improve to better fulfill the Comparator contract

10 years agoimprove to better fulfill the Comparator contract
Andreas Müller [Wed, 28 May 2014 23:21:21 +0000 (23:21 +0000)]
improve to better fulfill the Comparator contract

10 years agoimprove TaxonComparator to better fulfill the general Comparator contract.
Andreas Müller [Wed, 28 May 2014 23:10:15 +0000 (23:10 +0000)]
improve TaxonComparator to better fulfill the general Comparator contract.

10 years agofurther improve comparator contract implementation for TaxonComparatorSearch #4230
Andreas Müller [Wed, 28 May 2014 22:35:08 +0000 (22:35 +0000)]
further improve comparator contract implementation for TaxonComparatorSearch  #4230

10 years agoremove logging
Andreas Müller [Wed, 28 May 2014 17:46:38 +0000 (17:46 +0000)]
remove logging

10 years agofixing #4230, comparison issue
Andreas Müller [Wed, 28 May 2014 17:45:57 +0000 (17:45 +0000)]
fixing #4230, comparison issue

10 years ago - extended GbifResponse and BioCase services to query for a single record with a...
Patric Plitzner [Wed, 28 May 2014 14:09:53 +0000 (14:09 +0000)]
 - extended GbifResponse and BioCase services to query for a single record with a specific unitID

10 years ago - added workaround for year range queries because GBIF does not yet support eventDat...
Patric Plitzner [Wed, 28 May 2014 09:17:27 +0000 (09:17 +0000)]
 - added workaround for year range queries because GBIF does not yet support eventDate as query parameter

10 years ago - commented failing test
Patric Plitzner [Wed, 28 May 2014 09:12:14 +0000 (09:12 +0000)]
 - commented failing test

10 years ago - added class GbifRespone which wraps one DerivedUnit returned of the parsed GBIF...
Patric Plitzner [Wed, 28 May 2014 08:56:29 +0000 (08:56 +0000)]
 - added class GbifRespone which wraps one DerivedUnit returned of the parsed GBIF JSON response and the datasetKey to retrieve the original record

10 years agofix all protected title caches
Andreas Müller [Tue, 27 May 2014 15:41:19 +0000 (15:41 +0000)]
fix all protected title caches

10 years agoadded occurrence search to main rest api page
Cherian Mathew [Tue, 27 May 2014 13:46:49 +0000 (13:46 +0000)]
added occurrence search to main rest api page

10 years agoOccurrenceCatalogueController : added check for uuid corresponding to accepted taxon
Cherian Mathew [Tue, 27 May 2014 10:31:55 +0000 (10:31 +0000)]
OccurrenceCatalogueController : added check for uuid corresponding to accepted taxon
OccurrenceSearch : updated terms to be consistent
occurrence-catalogue-default : updated doc

10 years ago - commented failing test
Patric Plitzner [Tue, 27 May 2014 09:17:28 +0000 (09:17 +0000)]
 - commented failing test

10 years ago - extended test
Patric Plitzner [Tue, 27 May 2014 08:23:28 +0000 (08:23 +0000)]
 - extended test
 - added workaround for commas in URL
 - fixed parameter checking

10 years ago - added limit to GBIF query
Patric Plitzner [Mon, 26 May 2014 15:07:36 +0000 (15:07 +0000)]
 - added limit to GBIF query
 - added date format for date parameter
 - added missing parameters for GBIF query

10 years ago - implemented JSON parse logic for GBIF responses
Patric Plitzner [Mon, 26 May 2014 10:32:25 +0000 (10:32 +0000)]
 - implemented JSON parse logic for GBIF responses
  - DerivedUnitFacades are created from the parsed results
 - implemented/adapted test