Andreas Müller [Wed, 28 May 2014 17:46:38 +0000 (17:46 +0000)]
remove logging
Andreas Müller [Wed, 28 May 2014 17:45:57 +0000 (17:45 +0000)]
fixing #4230, comparison issue
Patric Plitzner [Wed, 28 May 2014 14:09:53 +0000 (14:09 +0000)]
- extended GbifResponse and BioCase services to query for a single record with a specific unitID
Patric Plitzner [Wed, 28 May 2014 09:17:27 +0000 (09:17 +0000)]
- added workaround for year range queries because GBIF does not yet support eventDate as query parameter
Patric Plitzner [Wed, 28 May 2014 09:12:14 +0000 (09:12 +0000)]
- commented failing test
Patric Plitzner [Wed, 28 May 2014 08:56:29 +0000 (08:56 +0000)]
- added class GbifRespone which wraps one DerivedUnit returned of the parsed GBIF JSON response and the datasetKey to retrieve the original record
Andreas Müller [Tue, 27 May 2014 15:41:19 +0000 (15:41 +0000)]
fix all protected title caches
Cherian Mathew [Tue, 27 May 2014 13:46:49 +0000 (13:46 +0000)]
added occurrence search to main rest api page
Cherian Mathew [Tue, 27 May 2014 10:31:55 +0000 (10:31 +0000)]
OccurrenceCatalogueController : added check for uuid corresponding to accepted taxon
OccurrenceSearch : updated terms to be consistent
occurrence-catalogue-default : updated doc
Patric Plitzner [Tue, 27 May 2014 09:17:28 +0000 (09:17 +0000)]
- commented failing test
Patric Plitzner [Tue, 27 May 2014 08:23:28 +0000 (08:23 +0000)]
- extended test
- added workaround for commas in URL
- fixed parameter checking
Patric Plitzner [Mon, 26 May 2014 15:07:36 +0000 (15:07 +0000)]
- added limit to GBIF query
- added date format for date parameter
- added missing parameters for GBIF query
Patric Plitzner [Mon, 26 May 2014 10:32:25 +0000 (10:32 +0000)]
- implemented JSON parse logic for GBIF responses
- DerivedUnitFacades are created from the parsed results
- implemented/adapted test
Cherian Mathew [Fri, 23 May 2014 15:48:29 +0000 (15:48 +0000)]
added missing import
Cherian Mathew [Fri, 23 May 2014 15:47:38 +0000 (15:47 +0000)]
DerivedUnitFacade : added getRights method
OccurrenceCatalogueController : maintenance , clean up and added sources and rights to the init facade strategy
OccurrenceSearch : reverted back code for specimen related information
Cherian Mathew [Fri, 23 May 2014 08:00:24 +0000 (08:00 +0000)]
updated controller and search to optimise the code for retrieving all occurrences.
added apt doc for endpoint
Patric Plitzner [Thu, 22 May 2014 14:08:18 +0000 (14:08 +0000)]
- added dateFrom and dateTo to OccurrenceQuery
Alexander Oppermann [Thu, 22 May 2014 11:33:16 +0000 (11:33 +0000)]
Added new documentation for checklist controller and endpoints
Alexander Oppermann [Thu, 22 May 2014 11:30:31 +0000 (11:30 +0000)]
minor fixes for the checklist controller, now each endpoint can have a different documentation resource
Alexander Oppermann [Thu, 22 May 2014 11:25:54 +0000 (11:25 +0000)]
Changed project scpecific naming to a more generic one.
Alexander Oppermann [Thu, 22 May 2014 11:24:42 +0000 (11:24 +0000)]
Changed project scpecific naming to a more generic one.
Alexander Oppermann [Thu, 22 May 2014 11:08:03 +0000 (11:08 +0000)]
Changed project scpecific naming to a more generic one.
Alexander Oppermann [Thu, 22 May 2014 11:01:47 +0000 (11:01 +0000)]
Changed project scpecific naming to a more generic one.
Andreas Müller [Wed, 21 May 2014 14:44:50 +0000 (14:44 +0000)]
minor
Patric Plitzner [Wed, 21 May 2014 14:05:41 +0000 (14:05 +0000)]
- do not add query parameters for emtpy strings
Andreas Müller [Wed, 21 May 2014 13:22:10 +0000 (13:22 +0000)]
add size to includedTaxaDTO
Alexander Oppermann [Wed, 21 May 2014 12:17:17 +0000 (12:17 +0000)]
Added new Service Endpoint [cdmserverURL]/checklist/flockSearch for the new flockSearch webService
Andreas Müller [Wed, 21 May 2014 12:16:53 +0000 (12:16 +0000)]
use doubtful parameter in included taxon service
Andreas Müller [Wed, 21 May 2014 10:41:40 +0000 (10:41 +0000)]
use doubtful parameter in included taxon service
Cherian Mathew [Wed, 21 May 2014 10:25:06 +0000 (10:25 +0000)]
setting url when database, server or port update instead of when updating datasource bean.
Alexander Oppermann [Wed, 21 May 2014 09:22:43 +0000 (09:22 +0000)]
included skeleton for flockSearch
Cherian Mathew [Wed, 21 May 2014 07:57:39 +0000 (07:57 +0000)]
updating connection url for data source bean
Patric Plitzner [Wed, 21 May 2014 07:40:58 +0000 (07:40 +0000)]
- added gbif external service for querying GBIF
- added gbif and biocase service to new package
- added temporary test
Andreas Müller [Tue, 20 May 2014 16:50:59 +0000 (16:50 +0000)]
update listIncludedTaxa #4045
Andreas Müller [Tue, 20 May 2014 16:18:28 +0000 (16:18 +0000)]
implement listIncludedTaxa first version #4045
Andreas Müller [Tue, 20 May 2014 10:13:44 +0000 (10:13 +0000)]
minor
Andreas Müller [Tue, 20 May 2014 10:11:08 +0000 (10:11 +0000)]
better use of generics in service layer and persistence list methods
Andreas Müller [Tue, 20 May 2014 09:33:06 +0000 (09:33 +0000)]
remove deprecated method (cont.)
Katja Luther [Tue, 20 May 2014 09:20:33 +0000 (09:20 +0000)]
add description for loadChildNodesOfTaxonNode
Andreas Müller [Tue, 20 May 2014 09:16:30 +0000 (09:16 +0000)]
remove deprecated method
Andreas Müller [Tue, 20 May 2014 09:10:30 +0000 (09:10 +0000)]
minor
Andreas Müller [Tue, 20 May 2014 09:05:22 +0000 (09:05 +0000)]
updates to Tcs import
Andreas Müller [Fri, 16 May 2014 12:13:54 +0000 (12:13 +0000)]
improve includeAllSubareas
Andreas Müller [Fri, 16 May 2014 12:10:34 +0000 (12:10 +0000)]
minor
Andreas Müller [Fri, 16 May 2014 12:10:00 +0000 (12:10 +0000)]
null handling for taxon names in nomSortOrderBrdige
Andreas Müller [Fri, 16 May 2014 11:48:16 +0000 (11:48 +0000)]
preliminary FK test
Andreas Müller [Thu, 15 May 2014 16:22:27 +0000 (16:22 +0000)]
serial Version ID for HomGroup
Andreas Müller [Thu, 15 May 2014 16:03:11 +0000 (16:03 +0000)]
handle null objects for save, saveOrUpdate and Update
Andreas Müller [Thu, 15 May 2014 11:44:12 +0000 (11:44 +0000)]
further fixes for subareas #4220
Andreas Müller [Thu, 15 May 2014 11:41:03 +0000 (11:41 +0000)]
add getKindOfUnit in import base
Andreas Müller [Thu, 15 May 2014 11:39:49 +0000 (11:39 +0000)]
better handling NewInstance in DerivedUnit
Andreas Müller [Thu, 15 May 2014 11:36:08 +0000 (11:36 +0000)]
minor
Katja Luther [Thu, 15 May 2014 10:58:01 +0000 (10:58 +0000)]
set getDescendants back to protected, remove @transient
Katja Luther [Thu, 15 May 2014 09:35:22 +0000 (09:35 +0000)]
adapt the service method loadChildNodesOfTaxonNode
with param recursive choose whether you get only the children of the node or the children of the children ...
Andreas Müller [Wed, 14 May 2014 15:38:39 +0000 (15:38 +0000)]
fix CCE in TaxonListController #4420
Cherian Mathew [Wed, 14 May 2014 09:42:53 +0000 (09:42 +0000)]
adding transient annotaion so that it is ignored in serializing
Patric Plitzner [Wed, 14 May 2014 08:08:34 +0000 (08:08 +0000)]
- made move methods session-safe by reloading the cdm entities
- enhanced/added test
Patric Plitzner [Wed, 14 May 2014 07:15:41 +0000 (07:15 +0000)]
- made move methods session-safe by reloading the cdm entities
- enhanced/added test
- made constructor of PreservationMethod protected to avoid JavaAssistEnhancementException
edit-jenkins [Tue, 13 May 2014 14:10:11 +0000 (14:10 +0000)]
[maven-release-plugin] prepare for next development iteration
edit-jenkins [Tue, 13 May 2014 14:10:08 +0000 (14:10 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.4
Katja Luther [Tue, 13 May 2014 10:44:42 +0000 (10:44 +0000)]
set getDescendants() public
Katja Luther [Mon, 12 May 2014 10:52:55 +0000 (10:52 +0000)]
moved the basic implementation of isDeletable from IdentifiableServiceBase to VersionableServiceBase
Andreas Müller [Fri, 9 May 2014 13:49:00 +0000 (13:49 +0000)]
Some updates for AlgaTerra Types import
Andreas Müller [Fri, 9 May 2014 09:05:23 +0000 (09:05 +0000)]
minor
Andreas Müller [Fri, 9 May 2014 09:03:51 +0000 (09:03 +0000)]
fixing bug for missing reference type
Andreas Müller [Fri, 9 May 2014 08:24:29 +0000 (08:24 +0000)]
implement cache strategy for section references and remove generics from reference cache strategies.
Andreas Müller [Thu, 8 May 2014 09:36:52 +0000 (09:36 +0000)]
Add preliminary SectionCacheStrategy and remove generics from reference cache strategies
Cherian Mathew [Wed, 7 May 2014 08:39:54 +0000 (08:39 +0000)]
CdmSource : added null port constant
CdmPersistentDataSource : corrected url port generation
Andreas Müller [Wed, 7 May 2014 08:24:54 +0000 (08:24 +0000)]
adding map to ReferenceSystem
Andreas Müller [Wed, 7 May 2014 08:23:25 +0000 (08:23 +0000)]
adding Gazetteer to ReferenceSystem
Andreas Müller [Tue, 6 May 2014 15:47:57 +0000 (15:47 +0000)]
fixing failing ODBC test
Andreas Müller [Tue, 6 May 2014 15:45:25 +0000 (15:45 +0000)]
remove imports and javadoc
Cherian Mathew [Tue, 6 May 2014 14:25:20 +0000 (14:25 +0000)]
added setter methods for common properties
Cherian Mathew [Tue, 6 May 2014 14:23:04 +0000 (14:23 +0000)]
CdmDataSourceBase : added method to retrieve database metadata
ICdmDataSource, CdmDataSource, CdmPersistentDataSource : added getter/setter methods for cdm source properties
CdmDataSource : added a new constructor to clone from and existing ICdmDataSource
Cherian Mathew [Tue, 6 May 2014 14:19:34 +0000 (14:19 +0000)]
added method to retrieve metadata of a database
Andreas Müller [Tue, 6 May 2014 14:13:15 +0000 (14:13 +0000)]
fix failing test (specimen import)
Andreas Müller [Tue, 6 May 2014 13:49:21 +0000 (13:49 +0000)]
fix for loading continents correctly
Andreas Müller [Tue, 6 May 2014 09:46:44 +0000 (09:46 +0000)]
better handling of empty ecology in facade
Andreas Müller [Mon, 5 May 2014 16:34:13 +0000 (16:34 +0000)]
Updated countries #3238
Katja Luther [Mon, 5 May 2014 12:59:57 +0000 (12:59 +0000)]
if deletion of an object fails the method does not throw an exception but returns a message
Alexander Oppermann [Wed, 30 Apr 2014 14:49:56 +0000 (14:49 +0000)]
Changed limits to INTEGER, so it is possible to nullify these parameters if needed
Patric Plitzner [Tue, 29 Apr 2014 12:19:15 +0000 (12:19 +0000)]
- show infraspecific taxa in Palmweb theme only if there are any
- fixed output (taxon and NOT taxa if only one sub species present)
Andreas Müller [Wed, 23 Apr 2014 12:49:33 +0000 (12:49 +0000)]
fix AccessionNumber->Locality bug in Specimen Excel Import
Patric Plitzner [Wed, 23 Apr 2014 11:43:15 +0000 (11:43 +0000)]
- added cascade saving to PreservationMethod of DerivedUnit
Alexander Oppermann [Tue, 22 Apr 2014 13:23:23 +0000 (13:23 +0000)]
Cachefile lives now for at least 7 days
Alexander Oppermann [Tue, 22 Apr 2014 08:45:42 +0000 (08:45 +0000)]
Changed if clause to fix #4194
Alexander Oppermann [Tue, 22 Apr 2014 08:26:54 +0000 (08:26 +0000)]
Uncommented check for cacheFile older than 24h see Ticket #4194
Andreas Müller [Thu, 17 Apr 2014 14:48:29 +0000 (14:48 +0000)]
Latest updates to Specimen Excel import
Andreas Müller [Thu, 17 Apr 2014 13:56:03 +0000 (13:56 +0000)]
handle ignore better
Andreas Müller [Thu, 17 Apr 2014 13:55:25 +0000 (13:55 +0000)]
determination abbrev
Alexander Oppermann [Thu, 17 Apr 2014 08:33:12 +0000 (08:33 +0000)]
Documentation for Webservice
edit-jenkins [Wed, 16 Apr 2014 12:22:36 +0000 (12:22 +0000)]
[maven-release-plugin] prepare for next development iteration
edit-jenkins [Wed, 16 Apr 2014 12:22:34 +0000 (12:22 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.3
Cherian Mathew [Tue, 15 Apr 2014 09:25:43 +0000 (09:25 +0000)]
removed ignore
Andreas Müller [Mon, 14 Apr 2014 09:01:31 +0000 (09:01 +0000)]
minor
Cherian Mathew [Fri, 11 Apr 2014 13:56:13 +0000 (13:56 +0000)]
adding context path to url
Alexander Oppermann [Fri, 11 Apr 2014 12:56:24 +0000 (12:56 +0000)]
Added missing sort to method listTaxonChildNodeOf via comparator
Cherian Mathew [Thu, 10 Apr 2014 14:20:15 +0000 (14:20 +0000)]
ignore tests for release
Alexander Oppermann [Thu, 10 Apr 2014 14:19:40 +0000 (14:19 +0000)]
*added Test for service method: getTaxonOfAcceptedTaxaByClassification and countTaxonOfAcceptedTaxaByClassification
*fixed SQL Statement so it works with H2 DB
edit-jenkins [Thu, 10 Apr 2014 13:51:08 +0000 (13:51 +0000)]
[maven-release-plugin] prepare for next development iteration