Andreas Müller [Thu, 7 Mar 2019 12:31:08 +0000 (13:31 +0100)]
ref #6794 change FeatureTree to TermTree
Andreas Müller [Wed, 6 Mar 2019 21:37:49 +0000 (22:37 +0100)]
ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
Andreas Müller [Mon, 11 Mar 2019 14:05:03 +0000 (15:05 +0100)]
ref #6794 move term relations down to TermCollection
Andreas Müller [Mon, 11 Mar 2019 13:40:56 +0000 (14:40 +0100)]
ref #6794 fix FeatureNodeServiceImplTest
Andreas Müller [Mon, 11 Mar 2019 13:11:41 +0000 (14:11 +0100)]
revert ClearDBDataSet to BlankDataSet to avoid foreign key problems during test data creation in SDDImportTest
Andreas Müller [Mon, 11 Mar 2019 13:10:26 +0000 (14:10 +0100)]
cleanup and ref #6794 rename TermTreeDaoImpl
Andreas Müller [Thu, 7 Mar 2019 15:26:28 +0000 (16:26 +0100)]
ref #6794 update script for graph_id and root_id
Andreas Müller [Thu, 7 Mar 2019 15:24:30 +0000 (16:24 +0100)]
replace BlankDataSet.xml by ClearDBDataSet.xml
Andreas Müller [Thu, 7 Mar 2019 15:22:01 +0000 (16:22 +0100)]
cleanup
Andreas Müller [Thu, 7 Mar 2019 15:21:33 +0000 (16:21 +0100)]
ref #6794 adjust hibernate configuration to new TermCollection and adjust test data
Andreas Müller [Thu, 7 Mar 2019 12:35:42 +0000 (13:35 +0100)]
ref #6794 add TermCollection and subclasses including TermTree
Andreas Müller [Thu, 7 Mar 2019 12:31:08 +0000 (13:31 +0100)]
ref #6794 change FeatureTree to TermTree
Andreas Müller [Thu, 7 Mar 2019 09:08:30 +0000 (10:08 +0100)]
ref #6794 update script for name changes in FeatureNode and TermVocabulary
Andreas Müller [Thu, 7 Mar 2019 09:07:25 +0000 (10:07 +0100)]
adapt SchemaUpdater to v5.5.1
Andreas Müller [Wed, 6 Mar 2019 23:36:53 +0000 (00:36 +0100)]
ref #6794 rename TermVocabulary table to TermCollection and remaining rename FeatureNode -> TermTreeNode
Andreas Müller [Wed, 6 Mar 2019 21:58:06 +0000 (22:58 +0100)]
update service/dataset.xsd location
Andreas Müller [Wed, 6 Mar 2019 21:37:49 +0000 (22:37 +0100)]
ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
Andreas Müller [Wed, 6 Mar 2019 11:46:52 +0000 (12:46 +0100)]
ref #6794 add TermRelation and TermRelationBase
Andreas Müller [Tue, 5 Mar 2019 23:47:02 +0000 (00:47 +0100)]
ref #6794 add term relation type to TermType and fix TermRelationType class
Andreas Müller [Tue, 5 Mar 2019 15:34:36 +0000 (16:34 +0100)]
ref #6794 adapt TermsDataSet-with_auditing_info in some packages after merge problem solved
Andreas Müller [Fri, 1 Mar 2019 22:08:52 +0000 (23:08 +0100)]
ref #8128 comment changes temporarily to make them compile
Andreas Müller [Fri, 1 Mar 2019 14:49:22 +0000 (15:49 +0100)]
ref #6794 add TermRelationshipType to test data
Andreas Müller [Thu, 28 Feb 2019 22:14:39 +0000 (23:14 +0100)]
ref #6794 add TermRelationshipType
Andreas Müller [Thu, 28 Feb 2019 22:10:45 +0000 (23:10 +0100)]
cleanup
Andreas Müller [Thu, 28 Feb 2019 08:15:59 +0000 (09:15 +0100)]
ref #7514 adapt MAN symbol to portal tests
Andreas Müller [Wed, 27 Feb 2019 15:34:53 +0000 (16:34 +0100)]
preparation for Feature.supportedClasses
Andreas Müller [Tue, 26 Feb 2019 16:04:37 +0000 (17:04 +0100)]
ref #7514 update misapplied name symbols again
Andreas Müller [Mon, 25 Feb 2019 20:01:49 +0000 (21:01 +0100)]
Add SchemaUpdater_55_551
jenkins [Fri, 19 Jul 2019 13:12:05 +0000 (15:12 +0200)]
Updating develop poms back to pre merge state
jenkins [Fri, 19 Jul 2019 13:12:05 +0000 (15:12 +0200)]
Merge branch 'master' into develop
jenkins [Fri, 19 Jul 2019 13:12:04 +0000 (15:12 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Fri, 19 Jul 2019 13:11:59 +0000 (15:11 +0200)]
Merge branch 'release/5.8.0'
jenkins [Fri, 19 Jul 2019 12:52:14 +0000 (14:52 +0200)]
updating poms for branch'release/5.8.0' with non-snapshot versions
jenkins [Fri, 19 Jul 2019 11:59:58 +0000 (13:59 +0200)]
updating poms for 5.9.0-SNAPSHOT development
Andreas Müller [Wed, 19 Jun 2019 10:22:18 +0000 (12:22 +0200)]
ref #8281 and E+M import (additional attributes in TeamOrPersonBase, Reference and TaxonNode)
Andreas Müller [Wed, 19 Jun 2019 10:17:37 +0000 (12:17 +0200)]
ref #5448 adapt parser to recognize old ranks like proles
Andreas Kohlbecker [Tue, 16 Jul 2019 13:16:30 +0000 (15:16 +0200)]
ref #8369 SpecimenTypeDesignationDTO: adding missing getters and basing on TypedEntityReference
Andreas Kohlbecker [Tue, 16 Jul 2019 11:36:19 +0000 (13:36 +0200)]
ref #8365 removing parentheses from code + accession number - again, adapting test
Andreas Kohlbecker [Tue, 16 Jul 2019 11:32:21 +0000 (13:32 +0200)]
ignoring just the test() method in TaxonRelationshipsDTOTest
Andreas Kohlbecker [Tue, 16 Jul 2019 10:07:34 +0000 (12:07 +0200)]
ref #8365 removing parentheses from code + accession number - again
Andreas Kohlbecker [Fri, 12 Jul 2019 18:34:20 +0000 (20:34 +0200)]
Revert "ignoring TaxonRelationshipsDTOTest"
This reverts commit
18b443282498e7bdbccadf14a861f6b474825297.
Andreas Kohlbecker [Fri, 12 Jul 2019 16:45:18 +0000 (18:45 +0200)]
ignoring TaxonRelationshipsDTOTest
Andreas Kohlbecker [Fri, 12 Jul 2019 15:33:45 +0000 (17:33 +0200)]
implemting TypeDesignationPortalController
Andreas Kohlbecker [Fri, 12 Jul 2019 15:32:42 +0000 (17:32 +0200)]
ref #8365 putting parentheses back
Andreas Kohlbecker [Fri, 12 Jul 2019 12:44:05 +0000 (14:44 +0200)]
ref #8365 stripping collection code from accession number only if followed by whitespace
Patrick Plitzner [Fri, 12 Jul 2019 05:29:14 +0000 (07:29 +0200)]
ref #8283 Fix possible NPE when no media is attached to term
Andreas Kohlbecker [Thu, 11 Jul 2019 16:11:44 +0000 (18:11 +0200)]
ref #8365 removing parentheses from code + accession number
Andreas Kohlbecker [Thu, 11 Jul 2019 16:01:55 +0000 (18:01 +0200)]
ref #8365 stripping collection code from accession number in DerivedUnitFacadeCacheStrategy
Andreas Kohlbecker [Thu, 11 Jul 2019 16:00:56 +0000 (18:00 +0200)]
avoiding NPE
Patrick Plitzner [Thu, 11 Jul 2019 06:09:09 +0000 (08:09 +0200)]
ref #8283 Add media uuids to term dto
- fix HQL response handling for left outer joins
Katja Luther [Fri, 5 Jul 2019 21:04:50 +0000 (23:04 +0200)]
minor in cdm light export
Katja Luther [Fri, 5 Jul 2019 20:14:17 +0000 (22:14 +0200)]
revert condensed distribution string and some performance issues in cdm light
Katja Luther [Fri, 5 Jul 2019 11:23:47 +0000 (13:23 +0200)]
add condensed distribution string to cdm light export
Katja Luther [Fri, 5 Jul 2019 12:06:19 +0000 (14:06 +0200)]
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Katja Luther [Fri, 5 Jul 2019 12:05:45 +0000 (14:05 +0200)]
smaller changes in abcd import
Patrick Plitzner [Fri, 5 Jul 2019 09:09:08 +0000 (11:09 +0200)]
ref #8248, #6774 Add top level term evaluation to test
Katja Luther [Fri, 5 Jul 2019 07:13:42 +0000 (09:13 +0200)]
fix dummy line in cdmlight export simple facts table
Andreas Kohlbecker [Thu, 4 Jul 2019 22:24:55 +0000 (00:24 +0200)]
addinional RegistrationService test and a bit of cleaning up
Andreas Kohlbecker [Thu, 4 Jul 2019 20:38:21 +0000 (22:38 +0200)]
ref #8352 controller and service to find registrations by name
Andreas Kohlbecker [Thu, 4 Jul 2019 19:50:22 +0000 (21:50 +0200)]
ref #8354 implenting registration serch by taxonUUIDs which also covers typedesignations
Andreas Kohlbecker [Thu, 4 Jul 2019 18:39:15 +0000 (20:39 +0200)]
RestrictionConverter converts uuid strings to UUID objetcs which have beed passed as json value
Andreas Kohlbecker [Thu, 4 Jul 2019 17:08:26 +0000 (19:08 +0200)]
cleaning up controller code
Patrick Plitzner [Thu, 4 Jul 2019 15:40:10 +0000 (17:40 +0200)]
ref #8248, #6774 Adapt tests
Patrick Plitzner [Thu, 4 Jul 2019 15:39:56 +0000 (17:39 +0200)]
ref #6774 Export reference uuid
Patrick Plitzner [Thu, 4 Jul 2019 12:18:30 +0000 (14:18 +0200)]
ref #8248 Check for existing media and references
Patrick Plitzner [Thu, 4 Jul 2019 11:29:31 +0000 (13:29 +0200)]
ref #8248, #6774 Fix order of term import
- add top level term property to import/export
Patrick Plitzner [Wed, 3 Jul 2019 13:44:22 +0000 (15:44 +0200)]
ref #8248 Fix possible NPE
Patrick Plitzner [Wed, 3 Jul 2019 13:44:04 +0000 (15:44 +0200)]
ref #6774 Move recursive model export to util class
Andreas Kohlbecker [Thu, 4 Jul 2019 11:27:25 +0000 (13:27 +0200)]
adding AnnotationType to getEmptyDefinedTermBase()
Katja Luther [Wed, 3 Jul 2019 10:48:04 +0000 (12:48 +0200)]
code cleaning
Andreas Kohlbecker [Tue, 2 Jul 2019 14:51:53 +0000 (16:51 +0200)]
using CleanSweepInsertLoadStrategy in SecurityTest
Andreas Kohlbecker [Tue, 2 Jul 2019 14:42:15 +0000 (16:42 +0200)]
adding missing REGISTRATION* tables to the ClearDBDataSet.xml
Andreas Kohlbecker [Tue, 2 Jul 2019 14:17:36 +0000 (16:17 +0200)]
using CleanSweepInsertLoadStrategy in DerivedUnitConverterIntegrationTest
Andreas Kohlbecker [Tue, 2 Jul 2019 13:10:44 +0000 (15:10 +0200)]
fix #8287 implementing support for null type status as filter value in Registration service
Andreas Kohlbecker [Tue, 2 Jul 2019 12:31:33 +0000 (14:31 +0200)]
Revert "adding missing MatchMode in createRestriction()"
This reverts commit
1eca13fafa584494a9300c1a6844d435ca5ae897.
Patrick Plitzner [Tue, 2 Jul 2019 12:06:59 +0000 (14:06 +0200)]
ref #8248 Add character to export (partially)
Andreas Kohlbecker [Tue, 2 Jul 2019 11:37:18 +0000 (13:37 +0200)]
ignoring RedmineRegistrationMessageServiceTest since RedmineRegistrationMessageService is going to be removed
Andreas Kohlbecker [Tue, 2 Jul 2019 11:33:58 +0000 (13:33 +0200)]
adding missing MatchMode in createRestriction()
Katja Luther [Tue, 2 Jul 2019 08:41:23 +0000 (10:41 +0200)]
fix failing test (add anywher to createRestrictions)
Andreas Kohlbecker [Mon, 1 Jul 2019 16:52:32 +0000 (18:52 +0200)]
ref #8330 removing unused and obsolete service methods which are replaces by the new one
Andreas Kohlbecker [Mon, 1 Jul 2019 16:34:48 +0000 (18:34 +0200)]
ref #7620 rest service /registrationDTO/find with filter string for references
Andreas Kohlbecker [Mon, 1 Jul 2019 16:32:58 +0000 (18:32 +0200)]
ref #7620 filtered registration search implemented with filter string for references
Andreas Kohlbecker [Mon, 1 Jul 2019 15:07:25 +0000 (17:07 +0200)]
ref #8330 ref #7885 removing confusing typo in test data
Andreas Kohlbecker [Mon, 1 Jul 2019 14:31:43 +0000 (16:31 +0200)]
ref #7885 tests for registration search by typified name and implementing order by
Andreas Kohlbecker [Mon, 1 Jul 2019 13:28:00 +0000 (15:28 +0200)]
ref #8330 dao method for filtered registration search implemented: reprocduces existing functionality plus extended name search ref #7885
Andreas Kohlbecker [Sun, 30 Jun 2019 15:35:37 +0000 (17:35 +0200)]
ref #8330 completing documentation regarding wildcards and fixing bug with MatchMode LIKE when using Restrictions
Andreas Kohlbecker [Sun, 30 Jun 2019 14:22:42 +0000 (16:22 +0200)]
ref #8330 documentation for RegistrationService.page and RegistrationWorkingsetService.pageDTO
Andreas Kohlbecker [Sun, 30 Jun 2019 14:10:09 +0000 (16:10 +0200)]
ref #8330 implementing tests for RegsitrationService.page and RegistrationWorkingsetService.pageDTO
Katja Luther [Mon, 1 Jul 2019 11:43:14 +0000 (13:43 +0200)]
ref #8344: add dummy line in empty simple facts table
Andreas Kohlbecker [Thu, 27 Jun 2019 12:25:53 +0000 (14:25 +0200)]
ref #7296 removing all config files related to the RemineMessagingService since this has been dropped completely
Andreas Kohlbecker [Thu, 6 Jun 2019 11:08:44 +0000 (13:08 +0200)]
ref #8321 cleaning up cotroller code
Katja Luther [Thu, 27 Jun 2019 12:11:38 +0000 (14:11 +0200)]
smaller changes in ABCD import - continue
Katja Luther [Thu, 27 Jun 2019 12:10:29 +0000 (14:10 +0200)]
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Katja Luther [Thu, 27 Jun 2019 12:09:49 +0000 (14:09 +0200)]
smaller changes in ABCD import
Katja Luther [Thu, 27 Jun 2019 07:08:24 +0000 (09:08 +0200)]
ref #8182: minor
Katja Luther [Wed, 26 Jun 2019 12:13:32 +0000 (14:13 +0200)]
ref #8182: accession number is required in webservice
Katja Luther [Wed, 26 Jun 2019 11:56:23 +0000 (13:56 +0200)]
ref #8182: add header to failed response
Katja Luther [Wed, 26 Jun 2019 08:05:09 +0000 (10:05 +0200)]
ref #8182: handle not existing dna for accession number
Katja Luther [Tue, 25 Jun 2019 12:33:46 +0000 (14:33 +0200)]
cdmlight: change area category to the area level
Patrick Plitzner [Tue, 25 Jun 2019 11:39:37 +0000 (13:39 +0200)]
ref #8248 Add feature to export (partially)