Andreas Müller [Mon, 7 Sep 2020 15:45:13 +0000 (17:45 +0200)]
fix #9121 add abbrevLabel and symbol to features flowering and fruiting (update script)
Andreas Müller [Mon, 7 Sep 2020 15:43:33 +0000 (17:43 +0200)]
fix #9062 remove StatisticalMeasurementValue.value_old
Andreas Müller [Mon, 7 Sep 2020 15:41:42 +0000 (17:41 +0200)]
fix #9082 fix empty partials_start and partials_end handling
Andreas Müller [Mon, 7 Sep 2020 15:39:40 +0000 (17:39 +0200)]
fix #9094 update TaxonNode.source from IdentifiableSource to DescriptionElementSource
Andreas Müller [Mon, 7 Sep 2020 15:38:01 +0000 (17:38 +0200)]
ref #6581 move references to sources for NomenclaturalStatus, NameRelationship, TaxonRelationship, HybridRelationship, TypeDesignation and TaxonName.nomenclaturalReference
Andreas Müller [Mon, 7 Sep 2020 15:34:22 +0000 (17:34 +0200)]
add base functionality for model update 5.15.2 -> 5.18.0
Andreas Müller [Mon, 7 Sep 2020 15:30:32 +0000 (17:30 +0200)]
ref #9121 and ref #9124 add abbreviations to feature and add measurement unit to feature altitude
Andreas Müller [Mon, 7 Sep 2020 15:25:40 +0000 (17:25 +0200)]
fix DefaultTermInitializerTest in Suite
Andreas Kohlbecker [Mon, 7 Sep 2020 15:24:47 +0000 (17:24 +0200)]
fix #9218 RegistrationController and RegistrationDTOController conform to CVE-2007-0450
Andreas Kohlbecker [Mon, 7 Sep 2020 13:22:41 +0000 (15:22 +0200)]
ref #9103 adding missing init strategy element to TaxonController
Andreas Müller [Fri, 4 Sep 2020 13:45:13 +0000 (15:45 +0200)]
cleanup
Katja Luther [Thu, 3 Sep 2020 11:57:37 +0000 (13:57 +0200)]
avoid multiple representation exception for source
Andreas Müller [Thu, 3 Sep 2020 04:35:22 +0000 (06:35 +0200)]
fix compile error in DefaultTermInitializerTest
Andreas Müller [Thu, 3 Sep 2020 04:29:23 +0000 (06:29 +0200)]
close csv reader for TermLoader
Andreas Müller [Thu, 3 Sep 2020 04:28:52 +0000 (06:28 +0200)]
ref #9211 add TODO on Classification.source
Andreas Müller [Thu, 3 Sep 2020 04:28:09 +0000 (06:28 +0200)]
cleanup
Andreas Müller [Thu, 3 Sep 2020 04:23:25 +0000 (06:23 +0200)]
revert ignore for EditGeoServiceTest
Andreas Kohlbecker [Wed, 2 Sep 2020 15:27:19 +0000 (17:27 +0200)]
ref #9212 logging more information in preparation for fixing this bug
Andreas Kohlbecker [Wed, 2 Sep 2020 13:59:13 +0000 (15:59 +0200)]
removing unused taglib dependencies
Andreas Müller [Wed, 2 Sep 2020 12:19:32 +0000 (14:19 +0200)]
cleanup
Andreas Müller [Wed, 2 Sep 2020 11:37:07 +0000 (13:37 +0200)]
ref #9204 update to commons-codec 1.15 in cdmlib
Andreas Müller [Wed, 2 Sep 2020 08:01:32 +0000 (10:01 +0200)]
cleanup
Andreas Müller [Tue, 1 Sep 2020 23:24:12 +0000 (01:24 +0200)]
cleanup
Andreas Müller [Tue, 1 Sep 2020 23:24:01 +0000 (01:24 +0200)]
ref #9204 revert removing xml-apis from cdmlib
Andreas Müller [Tue, 1 Sep 2020 23:08:26 +0000 (01:08 +0200)]
ref #9204 fix parent pom
Andreas Müller [Tue, 1 Sep 2020 23:08:00 +0000 (01:08 +0200)]
ref #9204 remove xml-apis from cdmlib as it is included in java8 (cont.)
Andreas Müller [Tue, 1 Sep 2020 22:56:13 +0000 (00:56 +0200)]
ref #9204 remove xml-apis from cdmlib as it is included in java8
Andreas Müller [Tue, 1 Sep 2020 22:29:17 +0000 (00:29 +0200)]
ref #9204 remove stax from cdmlib as it is included in java8
Andreas Müller [Tue, 1 Sep 2020 19:58:01 +0000 (21:58 +0200)]
ref #9204 replace jaxb-api by jakarta.xml.bind-api in cdmlib
Andreas Müller [Tue, 1 Sep 2020 18:55:33 +0000 (20:55 +0200)]
cleanup
Andreas Müller [Tue, 1 Sep 2020 18:55:12 +0000 (20:55 +0200)]
ref #9204 remove aspectjrt and some other cleanup related to aspectj
Andreas Kohlbecker [Tue, 1 Sep 2020 14:43:53 +0000 (16:43 +0200)]
fix #9210 adding indexed format specifiers and fixing hql issues
Andreas Müller [Tue, 1 Sep 2020 14:26:57 +0000 (16:26 +0200)]
ref #9204 update maven-resources-plugin to 2.7 (v3.x.x is available but needs adaptation) and cleanup
Andreas Müller [Tue, 1 Sep 2020 14:12:22 +0000 (16:12 +0200)]
ref #9204 preliminary revert maven-antrun-plugin version in cdmlib-model
Andreas Müller [Tue, 1 Sep 2020 13:59:16 +0000 (15:59 +0200)]
ref #9204 update maven-jar-plugin to v 3.2.0
Andreas Müller [Tue, 1 Sep 2020 13:52:32 +0000 (15:52 +0200)]
ref #9204 move and comment hibernate3-maven-plugin for 001_cdm.ddl creation to cdmlib-test
Andreas Müller [Tue, 1 Sep 2020 13:49:22 +0000 (15:49 +0200)]
cleanup
Andreas Müller [Tue, 1 Sep 2020 13:48:59 +0000 (15:48 +0200)]
ref #9204fix version in maven-antrun-plugin
Andreas Müller [Tue, 1 Sep 2020 13:35:41 +0000 (15:35 +0200)]
ref #9204 update maven-antrun-plugin to v 3.0.0
Andreas Müller [Tue, 1 Sep 2020 13:33:00 +0000 (15:33 +0200)]
update maven-surefire-plugin to latest version
Andreas Müller [Tue, 1 Sep 2020 13:31:22 +0000 (15:31 +0200)]
cleanup
Andreas Müller [Tue, 1 Sep 2020 13:18:36 +0000 (15:18 +0200)]
ref #9204 upgrade osgi.core to v7 and upgrade maven-bundle-plugin to 5.1.1
Andreas Müller [Tue, 1 Sep 2020 12:14:41 +0000 (14:14 +0200)]
cleanup
Andreas Müller [Tue, 1 Sep 2020 12:13:55 +0000 (14:13 +0200)]
ref #9204 try to remove org.ecipse:osgi from cdmlib-service and upgrade org.osgi.core to v6
Andreas Müller [Tue, 1 Sep 2020 11:19:42 +0000 (13:19 +0200)]
ref #9204 remove ooxml-schemas-1.4 from cdmlib-io (keep only poi-ooxml-schemas)
Andreas Müller [Mon, 31 Aug 2020 21:44:43 +0000 (23:44 +0200)]
Revert "ref #6581 try to fix exception in MatchStrategyConfigurator"
This reverts commit
e807e4380fddd21b2ac521057462a0d03cab298f.
Andreas Müller [Mon, 31 Aug 2020 21:41:50 +0000 (23:41 +0200)]
ref #6581 try to fix exception in MatchStrategyConfigurator
Andreas Müller [Mon, 31 Aug 2020 21:40:45 +0000 (23:40 +0200)]
try to fix exception in MatchStrategyConfigurator
Andreas Müller [Mon, 31 Aug 2020 21:40:10 +0000 (23:40 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 19:25:26 +0000 (21:25 +0200)]
add KeyStatement to PermissionClass
Andreas Müller [Mon, 31 Aug 2020 17:34:05 +0000 (19:34 +0200)]
ref #9204 update jaxb to version 2.3.3 (fix compile error with ZipWriter)
Andreas Müller [Mon, 31 Aug 2020 17:20:13 +0000 (19:20 +0200)]
ref #9204 update jaxb to version 2.3.3
Andreas Müller [Mon, 31 Aug 2020 17:16:33 +0000 (19:16 +0200)]
ceanup
Andreas Müller [Mon, 31 Aug 2020 16:01:25 +0000 (18:01 +0200)]
preliminary ignore GeoService tests
Andreas Müller [Mon, 31 Aug 2020 16:01:05 +0000 (18:01 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 15:38:26 +0000 (17:38 +0200)]
ref #9204 update sqlserver driver to new and maven available version 8.4.1.jre8 (cont.)
Andreas Müller [Mon, 31 Aug 2020 15:35:50 +0000 (17:35 +0200)]
ref #9204 update sqlserver driver to new and maven available version 8.4.1.jre8
Andreas Müller [Mon, 31 Aug 2020 15:04:32 +0000 (17:04 +0200)]
unignore geoservice tests
Andreas Müller [Mon, 31 Aug 2020 15:03:12 +0000 (17:03 +0200)]
preliminary ignore 2 mapservice tests
Andreas Müller [Mon, 31 Aug 2020 14:14:01 +0000 (16:14 +0200)]
ref #9204 partly revert removing of hibernate-validator dependencies in cdmlib
Andreas Müller [Mon, 31 Aug 2020 12:53:39 +0000 (14:53 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 12:47:56 +0000 (14:47 +0200)]
ref #9204 remove redundant commons-io dependencies (and doc)
Andreas Müller [Mon, 31 Aug 2020 12:25:47 +0000 (14:25 +0200)]
ref #9204 remove fixed avalon-framework version
Andreas Müller [Mon, 31 Aug 2020 10:55:04 +0000 (12:55 +0200)]
fix MobotOpenUrlServiceWrapperTest by adapting expected result
Andreas Müller [Mon, 31 Aug 2020 10:54:30 +0000 (12:54 +0200)]
ref #9204 remove exclusions for fop (as not valid for the new version anymore)
Andreas Müller [Mon, 31 Aug 2020 10:53:43 +0000 (12:53 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 10:12:44 +0000 (12:12 +0200)]
ref #8978 adapt StructuredDescriptionAggregationTest to BigDecimal (remaining issues)
Andreas Müller [Mon, 31 Aug 2020 09:55:33 +0000 (11:55 +0200)]
add DescriptiveDataSet_TaxonNode to ClearDBDataSet files
Andreas Müller [Fri, 28 Aug 2020 13:20:18 +0000 (15:20 +0200)]
cleanup
Andreas Müller [Fri, 28 Aug 2020 13:19:34 +0000 (15:19 +0200)]
ref #6581 adapt SpecimenImportConfiguratorTest test data
Andreas Müller [Fri, 28 Aug 2020 11:23:04 +0000 (13:23 +0200)]
cleanup
Andreas Müller [Fri, 28 Aug 2020 11:22:49 +0000 (13:22 +0200)]
ref #6581 adapt StatisticsDaoHibernateImpl to TaxonNode.source
Andreas Müller [Fri, 28 Aug 2020 11:15:52 +0000 (13:15 +0200)]
ref #6581 remove referenceForParentChildRelation from 001-cdm.h2.sql
Andreas Müller [Fri, 28 Aug 2020 11:12:39 +0000 (13:12 +0200)]
ref #6581 fix testdata for DerivedUnitConverterIntegrationTest.cascadeDelete
Andreas Müller [Fri, 28 Aug 2020 11:05:44 +0000 (13:05 +0200)]
ref #6581 update dataset.dtd in cdmlib
Andreas Müller [Fri, 28 Aug 2020 10:55:43 +0000 (12:55 +0200)]
cleanup
Andreas Müller [Fri, 28 Aug 2020 10:50:31 +0000 (12:50 +0200)]
ignore index files created by CdmModelCacher
Andreas Müller [Fri, 28 Aug 2020 10:43:40 +0000 (12:43 +0200)]
ref #6581 remove unused reference and microreference fields from SingleSourced classes (incl. TypeDesignationBase)
Andreas Müller [Thu, 27 Aug 2020 22:10:20 +0000 (00:10 +0200)]
ref #6581 !!! PRELIMINARY IGNORE TaxonNameDefaultCacheStrategyTest !!!
Andreas Müller [Thu, 27 Aug 2020 22:08:23 +0000 (00:08 +0200)]
ref #6581 improve setNomenclaturalReference(...) handling
Andreas Müller [Thu, 27 Aug 2020 22:07:48 +0000 (00:07 +0200)]
ref #6581 fix ReferringObjectMetadataFactoryTest.xml
Andreas Müller [Thu, 27 Aug 2020 22:07:08 +0000 (00:07 +0200)]
ref #6581 fully remove nomenclaturalReference and nomenclaturalMicroReference fields from TaxonName (cont.)
Andreas Müller [Thu, 27 Aug 2020 21:48:27 +0000 (23:48 +0200)]
ref #6581 !!! PRELIMINARY IGNORE TaxonGraphHibernateListenerTest !!!
Andreas Müller [Thu, 27 Aug 2020 21:47:43 +0000 (23:47 +0200)]
ref #6581 fully remove nomenclaturalReference and nomenclaturalMicroReference fields from TaxonName
Andreas Müller [Thu, 27 Aug 2020 21:46:49 +0000 (23:46 +0200)]
ref #6581 adapt NoDuplicateNamesValidator to nomenclaturalSource (doubtful if correct, but all this validation rule must be refactored)
Andreas Müller [Thu, 27 Aug 2020 21:45:19 +0000 (23:45 +0200)]
ref #6581 adapt TaxonGraphBeforeTransactionCompleteProcess to nomenclaturalSource
Andreas Müller [Thu, 27 Aug 2020 17:00:32 +0000 (19:00 +0200)]
ref #6581 remove or adapt nomenclaturalReference in service test data (and some removing of not needed data)
Andreas Müller [Thu, 27 Aug 2020 16:56:42 +0000 (18:56 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 16:54:30 +0000 (18:54 +0200)]
ref #6581 update HQL and property paths and similar to nomenclaturalSource (some issues unclear)
Andreas Müller [Thu, 27 Aug 2020 16:39:59 +0000 (18:39 +0200)]
remove unused MediaDaoImplTest.xml from cdmlib-service
Andreas Müller [Thu, 27 Aug 2020 13:19:13 +0000 (15:19 +0200)]
ref #6581 remove CITATIONMICROREFERENCE from TaxonRelationship in test data
Andreas Müller [Thu, 27 Aug 2020 13:18:30 +0000 (15:18 +0200)]
ref #6581 adapt links to nomenclaturalReference in persistence test data
Andreas Müller [Thu, 27 Aug 2020 13:18:02 +0000 (15:18 +0200)]
ref #6581 remove unnecessary links to nomenclaturalReference in persistence test data
Andreas Müller [Thu, 27 Aug 2020 13:14:20 +0000 (15:14 +0200)]
ref #6581 adapt search in ReferenceDaoHibernateImpl
Andreas Müller [Thu, 27 Aug 2020 13:13:26 +0000 (15:13 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 11:53:06 +0000 (13:53 +0200)]
remove created data from test data
Andreas Müller [Thu, 27 Aug 2020 11:52:17 +0000 (13:52 +0200)]
ref #6581 remove unnecessary nomenclaturalReference_ids from test data
Andreas Müller [Thu, 27 Aug 2020 11:45:14 +0000 (13:45 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 09:58:04 +0000 (11:58 +0200)]
ref #6581 remove null values for citationmicroreference and citation_id from test data
Andreas Müller [Thu, 27 Aug 2020 09:47:29 +0000 (11:47 +0200)]
ref #6581 fix test data with nomenclaturalMicroReference not being null